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FFCP PHASE1:Mm9::chr17:70318727..70318780,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=224997
|EntrezGene=224997
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=D3Z709
|UniProt=D3Z709
|association_with_transcript=0bp_to_ENSMUST00000130971,ENSMUST00000146730_5end
|association_with_transcript=0bp_to_ENSMUST00000130971,ENSMUST00000146730_5end
|cluster_id=chr17:70318727..70318780,+
|description=CAGE_peak_1_at_Dlgap1_5end
|description=CAGE_peak_1_at_Dlgap1_5end
|id=chr17:70318727..70318780,+
|id=chr17:70318727..70318780,+
|ontology_enrichment_celltype=CL:0000540!8.45e-15!33;CL:0000047!8.45e-15!33;CL:0000031!8.45e-15!33;CL:0000404!8.45e-15!33;CL:0000117!1.40e-11!23;CL:0000337!1.40e-11!23;CL:0000221!7.90e-11!44;CL:0000133!7.90e-11!44;CL:0002319!1.24e-10!43;CL:0000393!4.26e-10!39;CL:0000211!4.26e-10!39;CL:0000055!5.39e-07!50
|ontology_enrichment_celltype=CL:0000540!8.45e-15!33;CL:0000047!8.45e-15!33;CL:0000031!8.45e-15!33;CL:0000404!8.45e-15!33;CL:0000117!1.40e-11!23;CL:0000337!1.40e-11!23;CL:0000221!7.90e-11!44;CL:0000133!7.90e-11!44;CL:0002319!1.24e-10!43;CL:0000393!4.26e-10!39;CL:0000211!4.26e-10!39;CL:0000055!5.39e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.06e-17,33;CL:0000047,1.06e-17,33;CL:0000031,1.06e-17,33;CL:0000404,1.06e-17,33;CL:0000117,8.94e-14,23;CL:0000337,8.94e-14,23;CL:0000393,6.65e-13,39;CL:0000211,6.65e-13,39;CL:0000221,9.03e-11,44;CL:0000133,9.03e-11,44;CL:0002319,1.56e-10,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.41e-27!71;UBERON:0003075!5.41e-27!71;UBERON:0007284!5.41e-27!71;UBERON:0001017!7.71e-26!73;UBERON:0005743!7.71e-26!73;UBERON:0004121!9.77e-26!102;UBERON:0000924!9.77e-26!102;UBERON:0006601!9.77e-26!102;UBERON:0000073!6.30e-25!75;UBERON:0001016!6.30e-25!75;UBERON:0001049!1.17e-19!52;UBERON:0005068!1.17e-19!52;UBERON:0006241!1.17e-19!52;UBERON:0007135!1.17e-19!52;UBERON:0000033!1.17e-19!63;UBERON:0000955!7.52e-19!50;UBERON:0006238!7.52e-19!50;UBERON:0002616!4.16e-18!49;UBERON:0002020!1.24e-17!34;UBERON:0003056!9.15e-17!49;UBERON:0002791!8.35e-15!29;UBERON:0003528!8.35e-15!29;UBERON:0001893!8.35e-15!29;UBERON:0003080!9.44e-15!40;UBERON:0002780!3.73e-14!39;UBERON:0001890!3.73e-14!39;UBERON:0006240!3.73e-14!39;UBERON:0000956!1.24e-10!21;UBERON:0001869!1.24e-10!21;UBERON:0000203!1.24e-10!21;UBERON:0002619!2.23e-09!17;UBERON:0002021!4.05e-08!10;UBERON:0000411!4.05e-08!10;UBERON:0001950!4.05e-08!10;UBERON:0007811!1.25e-07!86;UBERON:0000468!4.70e-07!333;UBERON:0000153!8.59e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.05e-27,73;UBERON:0001016,1.85e-25,75;UBERON:0002346,1.26e-23,64;UBERON:0003075,1.26e-23,64;UBERON:0007284,1.26e-23,64;UBERON:0000073,4.70e-22,54;UBERON:0004121,9.02e-22,95;UBERON:0000924,9.02e-22,95;UBERON:0006601,9.02e-22,95;UBERON:0001049,1.86e-20,52;UBERON:0005068,1.86e-20,52;UBERON:0006241,1.86e-20,52;UBERON:0007135,1.86e-20,52;UBERON:0002020,3.67e-20,34;UBERON:0010371,1.42e-19,73;UBERON:0000955,2.87e-17,47;UBERON:0006238,2.87e-17,47;UBERON:0010314,3.03e-17,92;UBERON:0003528,9.74e-17,29;UBERON:0002791,9.74e-17,29;UBERON:0001893,9.74e-17,29;UBERON:0002616,1.95e-16,46;UBERON:0003056,2.71e-16,49;UBERON:0003080,6.11e-15,40;UBERON:0002780,3.01e-14,39;UBERON:0001890,3.01e-14,39;UBERON:0006240,3.01e-14,39;UBERON:0000956,1.09e-11,21;UBERON:0001869,1.09e-11,21;UBERON:0000203,1.09e-11,21;UBERON:0002619,3.86e-10,17;UBERON:0002021,1.48e-09,10;UBERON:0000411,1.48e-09,10;UBERON:0001950,1.48e-09,10
|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2872727453797,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0.65407546914134,0.219686182734472,0.58328969722285,0.279972843250725,0,0,0,0,0.257259436035947,0,0,7.89034197352431,6.87688273053643,3.80298842103708,0,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,3.94020526772215,4.18518408828241,2.73422449756797,18.2816630018434,22.9703282589678,8.08439274818697,5.271500906003,13.7882817991503,33.0347642998166,55.0332427147159,43.9314685112856,9.36392642884376,8.78281378583133,10.939180781692,20.6595419261022,25.8870800614573,28.7260705820403,27.6950870345248,26.6235043094322,10.9975673036927,0.075726193333184,0.226714680320357,0,0,0,4.31762553310254,1.29955283489534,1.79210754838934,1.68533304158102,0,0,0,3.09855523508697,0,0,0,0,0,0.505524445014783,2.16949371466214,0,23.1569736941127,3.12273588179045,10.9607572192371,8.53277339847416,13.565037649736,16.2272415847273,11.8126595849895,0,0.722996784599558,0,0.323533699894818,0.220841518460394,0,0,79.0508151931177,66.8134994734922,0,0,0,0,31.3062436356079,43.4625572677695,13.1937069718508,81.1759575297931,74.4131980831262,48.6224024269371,60.0292673350703,2.03678727700633,0.248813941220186,1.0108910337347,4.41927897361595,0.650602214813519,0.689706313300419,1.98068342785884,2.26057226753573,6.39543092022482,6.40568601424249,6.09061209638237,16.815719098036,0,1.70195472151037,1.93546236580344,0.657587197282725,0,0.696504333044333,0.411564272815887,3.38358253591438,0,0,0,0,0,0,0.473489471170421,0,0.154267112887378,0.232533944750408,0,0,0,0,0.0810688095458557,0.292399974850665,0.439100230582101,0.268412837520744,118.393241041604,13.5834088340655,0,0,1.70630600428187,1.39342003116263,1.9330119198314,0.80673409849337,0.667134131534611,0.760902504450237,0,0.164698954724011,0,0.795825888164603,0.19496408711912,0.898819408654221,0,0.199141273254367,0,1.48523066392647,1.1270773567308,0,0.581857461502877,0.701358198903186,0.379419222745544,0.590440591918409,0.627994911365499,0.493588655687202,2.07516838961004,0.166845105716094,0.589676985339609,0,0,0.241177159752417,0,0,0.162135226775035,0.549122826376163,0,0.372140947668503,1.87222603868736,0.505157755894224,0.717589654087649,0.482443521363367,0,0.189491411770485,0.488894929326078,0.509235257325564,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0.275936746304732,25.6880943980467,26.9586879162067,0,0,7.2566890465739,10.1514073517126,5.81643173878557,1.91175038362042,5.79276552614225,2.83076530788832,9.71545684019746,11.6902343164525,9.88219444866309,161.624622160169,4.68402281187286,0.890328018336276,2.11753047159649,3.79431282836832,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0.775284879504663,0.363533729477506,0.712994756769443,0,0,0,2.7235168460303,0.900305470156551,0,0.428674070063185,0.532020700926821,0.535106452806212,1.97458824722545,1.8267896946876,0.23467170806371,0,1.7642271844397,0.16488625294148,0,0.120625849856312,0.119372344003136,0.164140899745061,0.291480836629851,24.8469904694083,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.609958401380546,1.51207477150522,1.67270636811575,0.655087691238533,0.404593039154462,1.23980183588004,0,0.259229946583586,0,2.25477175473676,6.13017838780313,3.30916980914195,3.50012139019286,2.32487682259916,2.02747350588934,3.16864544343536,1.17183946359555,2.62148361064277,4.34851417486811,3.74439008135225,0.632022241256357,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0.443971906748129,0.179427713218951,0.167884616364078,0.386379188064381,1.31377732815827,2.38097111547445,0.214368379079066,0.501572104035363,60.9931990026432,61.2232564554545,56.7166558305003,69.0849793021624,62.3425092991284,71.7624202520215,58.7269575201671,64.3959320610635,73.4090702554411,66.2733199042329,0.726511433089237,1.19707462020309,2.04880326904961,4.86213434136588,1.46729213839588,2.5738091183002,7.11189528965169,3.5025959730612,4.1719497246936,4.54854981174835,3.54871019846336,2.45214243801899,3.09016974650612,4.1616349063165,4.47996657853783,5.71552429539688,4.28772005995965,3.6652751888104,2.88460130562315,2.94397840268795,2.40008476669791,3.54951612318675,4.29185141905178,4.0696996657052,4.04670335785922,3.9768865709088,3.65855945745545,6.05060336307039,3.39510284614654,2.80571135828869,4.27086065247027,3.64466584789585,5.32000356120596,4.80304207676495,3.47231899766054,6.49507502638659,4.21076895201735,1.50409737833809,2.10417165275728,0.882365676478062,1.39120701372253
|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2872727453797,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0.65407546914134,0.219686182734472,0.58328969722285,0.279972843250725,0,0,0,0,0.257259436035947,0,0,7.89034197352431,6.87688273053643,3.80298842103708,0,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,3.94020526772215,4.18518408828241,2.73422449756797,18.2816630018434,22.9703282589678,8.08439274818697,5.271500906003,13.7882817991503,33.0347642998166,55.0332427147159,43.9314685112856,9.36392642884376,8.78281378583133,10.939180781692,20.6595419261022,25.8870800614573,28.7260705820403,27.6950870345248,26.6235043094322,10.9975673036927,0.075726193333184,0.226714680320357,0,0,0,4.31762553310254,1.29955283489534,1.79210754838934,1.68533304158102,0,0,0,3.09855523508697,0,0,0,0,0,0.505524445014783,2.16949371466214,0,23.1569736941127,3.12273588179045,10.9607572192371,8.53277339847416,13.565037649736,16.2272415847273,11.8126595849895,0,0.722996784599558,0,0.323533699894818,0.220841518460394,0,0,79.0508151931177,66.8134994734922,0,0,0,0,31.3062436356079,43.4625572677695,13.1937069718508,81.1759575297931,74.4131980831262,48.6224024269371,60.0292673350703,2.03678727700633,0.248813941220186,1.0108910337347,4.41927897361595,0.650602214813519,0.689706313300419,1.98068342785884,2.26057226753573,6.39543092022482,6.40568601424249,6.09061209638237,16.815719098036,0,1.70195472151037,1.93546236580344,0.657587197282725,0,0.696504333044333,0.411564272815887,3.38358253591438,0,0,0,0,0,0,0.473489471170421,0,0.154267112887378,0.232533944750408,0,0,0,0,0.0810688095458557,0.292399974850665,0.439100230582101,0.268412837520744,118.393241041604,13.5834088340655,0,0,1.70630600428187,1.39342003116263,1.9330119198314,0.80673409849337,0.667134131534611,0.760902504450237,0,0.164698954724011,0,0.795825888164603,0.19496408711912,0.898819408654221,0,0.199141273254367,0,1.48523066392647,1.1270773567308,0,0.581857461502877,0.701358198903186,0.379419222745544,0.590440591918409,0.627994911365499,0.493588655687202,2.07516838961004,0.166845105716094,0.589676985339609,0,0,0.241177159752417,0,0,0.162135226775035,0.549122826376163,0,0.372140947668503,1.87222603868736,0.505157755894224,0.717589654087649,0.482443521363367,0,0.189491411770485,0.488894929326078,0.509235257325564,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0.275936746304732,25.6880943980467,26.9586879162067,0,0,7.2566890465739,10.1514073517126,5.81643173878557,1.91175038362042,5.79276552614225,2.83076530788832,9.71545684019746,11.6902343164525,9.88219444866309,161.624622160169,4.68402281187286,0.890328018336276,2.11753047159649,3.79431282836832,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0.775284879504663,0.363533729477506,0.712994756769443,0,0,0,2.7235168460303,0.900305470156551,0,0.428674070063185,0.532020700926821,0.535106452806212,1.97458824722545,1.8267896946876,0.23467170806371,0,1.7642271844397,0.16488625294148,0,0.120625849856312,0.119372344003136,0.164140899745061,0.291480836629851,24.8469904694083,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.609958401380546,1.51207477150522,1.67270636811575,0.655087691238533,0.404593039154462,1.23980183588004,0,0.259229946583586,0,2.25477175473676,6.13017838780313,3.30916980914195,3.50012139019286,2.32487682259916,2.02747350588934,3.16864544343536,1.17183946359555,2.62148361064277,4.34851417486811,3.74439008135225,0.632022241256357,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0.443971906748129,0.179427713218951,0.167884616364078,0.386379188064381,1.31377732815827,2.38097111547445,0.214368379079066,0.501572104035363,60.9931990026432,61.2232564554545,56.7166558305003,69.0849793021624,62.3425092991284,71.7624202520215,58.7269575201671,64.3959320610635,73.4090702554411,66.2733199042329,0.726511433089237,1.19707462020309,2.04880326904961,4.86213434136588,1.46729213839588,2.5738091183002,7.11189528965169,3.5025959730612,4.1719497246936,4.54854981174835,3.54871019846336,2.45214243801899,3.09016974650612,4.1616349063165,4.47996657853783,5.71552429539688,4.28772005995965,3.6652751888104,2.88460130562315,2.94397840268795,2.40008476669791,3.54951612318675,4.29185141905178,4.0696996657052,4.04670335785922,3.9768865709088,3.65855945745545,6.05060336307039,3.39510284614654,2.80571135828869,4.27086065247027,3.64466584789585,5.32000356120596,4.80304207676495,3.47231899766054,6.49507502638659,4.21076895201735,1.50409737833809,2.10417165275728,0.882365676478062,1.39120701372253
|short_description=p1@Dlgap1
|short_description=p1@Dlgap1
}}
}}

Latest revision as of 19:55, 26 September 2015

Short description:p1@Dlgap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dlgap1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000130971, ENSMUST00000146730_5end
EntrezGene:Dlgap1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dlgap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.89
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.97
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D333.03
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F355.03
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D743.93
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.78
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.66
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E525.89
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.73
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.70
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F626.62
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D723.16
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D610.96
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F513.57
adrenal gland, neonate N00.CNhs11191.1311-23C116.23
adrenal gland, neonate N25.CNhs11223.1377-27I311.81
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B279.05
cerebellum, neonate N30.CNhs11135.1395-42I266.81
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A431.31
corpus striatum, adult.CNhs10487.19-21D843.46
corpus striatum, neonate N00.CNhs11226.630-43F113.19
cortex, adult.CNhs10473.12-14D581.18
cortex, neonate N30.CNhs11107.1392-42F274.41
diencephalon, adult.CNhs10482.20-12F248.62
diencephalon, neonate N30.CNhs11201.1388-42B260.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C66.40
eyeball, neonate N01.CNhs11140.1532-43E76.41
eyeball, neonate N02.CNhs11205.1551-44G86.09
eyeball, neonate N16.CNhs11188.777-19A216.82
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E8118.39
hippocampus, neonate N00.CNhs11228.627-43G113.58
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C225.69
medulla oblongata, neonate N30.CNhs11200.1396-42A326.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.69
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I9161.62
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C924.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F56.13
testis, embryo E15.CNhs11034.443-27C53.31
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B73.17
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D92.62
testis, neonate N20.CNhs11110.839-18H34.35
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A160.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A261.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A356.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D769.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A462.34
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A571.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A658.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A764.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A873.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A966.27
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.80
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.06e-1733
neuronal stem cell1.06e-1733
neuroblast1.06e-1733
electrically signaling cell1.06e-1733
CNS neuron (sensu Vertebrata)8.94e-1423
neuroblast (sensu Vertebrata)8.94e-1423
electrically responsive cell6.65e-1339
electrically active cell6.65e-1339
ectodermal cell9.03e-1144
neurectodermal cell9.03e-1144
neural cell1.56e-1043

Uber anatomy
Ontology termp-valuen
central nervous system7.05e-2773
nervous system1.85e-2575
neurectoderm1.26e-2364
neural plate1.26e-2364
presumptive neural plate1.26e-2364
regional part of nervous system4.70e-2254
ectoderm-derived structure9.02e-2295
ectoderm9.02e-2295
presumptive ectoderm9.02e-2295
neural tube1.86e-2052
neural rod1.86e-2052
future spinal cord1.86e-2052
neural keel1.86e-2052
gray matter3.67e-2034
ecto-epithelium1.42e-1973
brain2.87e-1747
future brain2.87e-1747
structure with developmental contribution from neural crest3.03e-1792
brain grey matter9.74e-1729
regional part of telencephalon9.74e-1729
telencephalon9.74e-1729
regional part of brain1.95e-1646
pre-chordal neural plate2.71e-1649
anterior neural tube6.11e-1540
regional part of forebrain3.01e-1439
forebrain3.01e-1439
future forebrain3.01e-1439
cerebral cortex1.09e-1121
cerebral hemisphere1.09e-1121
pallium1.09e-1121
regional part of cerebral cortex3.86e-1017
occipital lobe1.48e-0910
visual cortex1.48e-0910
neocortex1.48e-0910
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