FFCP PHASE1:Mm9::chr11:105898242..105898259,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71833 | |EntrezGene=71833 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENSMUST00000106891_5end | |association_with_transcript=28bp_to_ENSMUST00000106891_5end | ||
|cluster_id=chr11:105898242..105898259,+ | |||
|description=CAGE_peak_2_at_Dcaf7_5end | |description=CAGE_peak_2_at_Dcaf7_5end | ||
|id=chr11:105898242..105898259,+ | |id=chr11:105898242..105898259,+ | ||
|ontology_enrichment_celltype=CL:0000540!3.41e-17!33;CL:0000047!3.41e-17!33;CL:0000031!3.41e-17!33;CL:0000404!3.41e-17!33;CL:0000117!8.34e-14!23;CL:0000337!8.34e-14!23;CL:0000393!2.73e-13!39;CL:0000211!2.73e-13!39;CL:0000221!3.08e-12!44;CL:0000133!3.08e-12!44;CL:0002319!5.95e-12!43;CL:0000055!3.97e-09!50 | |ontology_enrichment_celltype=CL:0000540!3.41e-17!33;CL:0000047!3.41e-17!33;CL:0000031!3.41e-17!33;CL:0000404!3.41e-17!33;CL:0000117!8.34e-14!23;CL:0000337!8.34e-14!23;CL:0000393!2.73e-13!39;CL:0000211!2.73e-13!39;CL:0000221!3.08e-12!44;CL:0000133!3.08e-12!44;CL:0002319!5.95e-12!43;CL:0000055!3.97e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.41e-17,33;CL:0000047,3.41e-17,33;CL:0000031,3.41e-17,33;CL:0000404,3.41e-17,33;CL:0000117,8.34e-14,23;CL:0000337,8.34e-14,23;CL:0000393,2.73e-13,39;CL:0000211,2.73e-13,39;CL:0000221,3.08e-12,44;CL:0000133,3.08e-12,44;CL:0002319,5.95e-12,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.95e-28!73;UBERON:0005743!3.95e-28!73;UBERON:0000073!7.68e-27!75;UBERON:0001016!7.68e-27!75;UBERON:0002346!1.32e-22!71;UBERON:0003075!1.32e-22!71;UBERON:0007284!1.32e-22!71;UBERON:0001049!9.83e-22!52;UBERON:0005068!9.83e-22!52;UBERON:0006241!9.83e-22!52;UBERON:0007135!9.83e-22!52;UBERON:0004121!5.19e-21!102;UBERON:0000924!5.19e-21!102;UBERON:0006601!5.19e-21!102;UBERON:0000955!3.82e-20!50;UBERON:0006238!3.82e-20!50;UBERON:0003056!6.62e-20!49;UBERON:0000033!1.43e-19!63;UBERON:0002616!1.52e-19!49;UBERON:0003080!2.66e-19!40;UBERON:0002780!6.46e-19!39;UBERON:0001890!6.46e-19!39;UBERON:0006240!6.46e-19!39;UBERON:0002020!6.74e-18!34;UBERON:0007811!4.65e-17!86;UBERON:0000153!3.85e-16!94;UBERON:0002791!2.43e-14!29;UBERON:0003528!2.43e-14!29;UBERON:0001893!2.43e-14!29;UBERON:0000956!2.02e-10!21;UBERON:0001869!2.02e-10!21;UBERON:0000203!2.02e-10!21;UBERON:0002619!1.37e-08!17;UBERON:0002021!3.39e-07!10;UBERON:0000411!3.39e-07!10;UBERON:0001950!3.39e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.95e-28,73;UBERON:0001016,7.68e-27,75;UBERON:0002346,7.57e-24,64;UBERON:0003075,7.57e-24,64;UBERON:0007284,7.57e-24,64;UBERON:0000073,3.22e-23,54;UBERON:0001049,9.83e-22,52;UBERON:0005068,9.83e-22,52;UBERON:0006241,9.83e-22,52;UBERON:0007135,9.83e-22,52;UBERON:0004121,1.68e-21,95;UBERON:0000924,1.68e-21,95;UBERON:0006601,1.68e-21,95;UBERON:0003056,6.62e-20,49;UBERON:0003080,2.66e-19,40;UBERON:0010371,5.51e-19,73;UBERON:0002780,6.46e-19,39;UBERON:0001890,6.46e-19,39;UBERON:0006240,6.46e-19,39;UBERON:0000955,1.13e-18,47;UBERON:0006238,1.13e-18,47;UBERON:0002616,4.39e-18,46;UBERON:0002020,6.74e-18,34;UBERON:0010314,8.95e-16,92;UBERON:0003528,2.43e-14,29;UBERON:0002791,2.43e-14,29;UBERON:0001893,2.43e-14,29;UBERON:0000956,2.02e-10,21;UBERON:0001869,2.02e-10,21;UBERON:0000203,2.02e-10,21;UBERON:0002619,1.37e-08,17;UBERON:0002021,3.39e-07,10;UBERON:0000411,3.39e-07,10;UBERON:0001950,3.39e-07,10 | |||
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| ||
|short_description=p2@Dcaf7 | |short_description=p2@Dcaf7 | ||
}} | }} |
Latest revision as of 19:59, 26 September 2015
Short description: | p2@Dcaf7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dcaf7_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENSMUST00000106891_5end |
EntrezGene: | Dcaf7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.41e-17 | 33 |
neuronal stem cell | 3.41e-17 | 33 |
neuroblast | 3.41e-17 | 33 |
electrically signaling cell | 3.41e-17 | 33 |
CNS neuron (sensu Vertebrata) | 8.34e-14 | 23 |
neuroblast (sensu Vertebrata) | 8.34e-14 | 23 |
electrically responsive cell | 2.73e-13 | 39 |
electrically active cell | 2.73e-13 | 39 |
ectodermal cell | 3.08e-12 | 44 |
neurectodermal cell | 3.08e-12 | 44 |
neural cell | 5.95e-12 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.95e-28 | 73 |
nervous system | 7.68e-27 | 75 |
neurectoderm | 7.57e-24 | 64 |
neural plate | 7.57e-24 | 64 |
presumptive neural plate | 7.57e-24 | 64 |
regional part of nervous system | 3.22e-23 | 54 |
neural tube | 9.83e-22 | 52 |
neural rod | 9.83e-22 | 52 |
future spinal cord | 9.83e-22 | 52 |
neural keel | 9.83e-22 | 52 |
ectoderm-derived structure | 1.68e-21 | 95 |
ectoderm | 1.68e-21 | 95 |
presumptive ectoderm | 1.68e-21 | 95 |
pre-chordal neural plate | 6.62e-20 | 49 |
anterior neural tube | 2.66e-19 | 40 |
ecto-epithelium | 5.51e-19 | 73 |
regional part of forebrain | 6.46e-19 | 39 |
forebrain | 6.46e-19 | 39 |
future forebrain | 6.46e-19 | 39 |
brain | 1.13e-18 | 47 |
future brain | 1.13e-18 | 47 |
regional part of brain | 4.39e-18 | 46 |
gray matter | 6.74e-18 | 34 |
structure with developmental contribution from neural crest | 8.95e-16 | 92 |
brain grey matter | 2.43e-14 | 29 |
regional part of telencephalon | 2.43e-14 | 29 |
telencephalon | 2.43e-14 | 29 |
cerebral cortex | 2.02e-10 | 21 |
cerebral hemisphere | 2.02e-10 | 21 |
pallium | 2.02e-10 | 21 |
regional part of cerebral cortex | 1.37e-08 | 17 |
occipital lobe | 3.39e-07 | 10 |
visual cortex | 3.39e-07 | 10 |
neocortex | 3.39e-07 | 10 |