FFCP PHASE1:Mm9::chr4:155043228..155043272,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76580 | |EntrezGene=76580 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=321 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENSMUST00000139289_5end | |association_with_transcript=29bp_to_ENSMUST00000139289_5end | ||
|cluster_id=chr4:155043228..155043272,- | |||
|description=CAGE_peak_2_at_Mib2_5end | |description=CAGE_peak_2_at_Mib2_5end | ||
|id=chr4:155043228..155043272,- | |id=chr4:155043228..155043272,- | ||
|ontology_enrichment_celltype=CL:0000540!2.52e-12!33;CL:0000047!2.52e-12!33;CL:0000031!2.52e-12!33;CL:0000404!2.52e-12!33;CL:0000117!4.19e-12!23;CL:0000337!4.19e-12!23;CL:0000221!3.75e-11!44;CL:0000133!3.75e-11!44;CL:0002319!7.76e-11!43;CL:0000393!5.87e-09!39;CL:0000211!5.87e-09!39;CL:0000055!7.00e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.47e-13,33;CL:0000047,9.47e-13,33;CL:0000031,9.47e-13,33;CL:0000404,9.47e-13,33;CL:0000117,1.60e-12,23;CL:0000337,1.60e-12,23;CL:0000221,1.58e-11,44;CL:0000133,1.58e-11,44;CL:0002319,3.37e-11,43;CL:0000393,4.66e-09,39;CL:0000211,4.66e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.68e-22!73;UBERON:0005743!7.68e-22!73;UBERON:0000073!3.01e-20!75;UBERON:0001016!3.01e-20!75;UBERON:0002346!2.61e-19!71;UBERON:0003075!2.61e-19!71;UBERON:0007284!2.61e-19!71;UBERON:0001049!2.29e-18!52;UBERON:0005068!2.29e-18!52;UBERON:0006241!2.29e-18!52;UBERON:0007135!2.29e-18!52;UBERON:0000033!6.02e-18!63;UBERON:0004121!2.43e-17!102;UBERON:0000924!2.43e-17!102;UBERON:0006601!2.43e-17!102;UBERON:0000955!6.25e-16!50;UBERON:0006238!6.25e-16!50;UBERON:0000153!7.29e-16!94;UBERON:0002616!1.72e-15!49;UBERON:0003056!8.15e-15!49;UBERON:0007811!7.08e-14!86;UBERON:0003080!2.29e-12!40;UBERON:0002020!5.45e-12!34;UBERON:0002780!7.41e-12!39;UBERON:0001890!7.41e-12!39;UBERON:0006240!7.41e-12!39;UBERON:0002791!4.94e-09!29;UBERON:0003528!4.94e-09!29;UBERON:0001893!4.94e-09!29;UBERON:0003076!4.87e-07!12;UBERON:0003057!4.87e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.40e-22,73;UBERON:0002346,1.89e-21,64;UBERON:0003075,1.89e-21,64;UBERON:0007284,1.89e-21,64;UBERON:0001016,6.37e-21,75;UBERON:0000073,2.58e-19,54;UBERON:0001049,5.78e-19,52;UBERON:0005068,5.78e-19,52;UBERON:0006241,5.78e-19,52;UBERON:0007135,5.78e-19,52;UBERON:0004121,5.34e-18,95;UBERON:0000924,5.34e-18,95;UBERON:0006601,5.34e-18,95;UBERON:0010371,1.19e-17,73;UBERON:0000955,6.57e-16,47;UBERON:0006238,6.57e-16,47;UBERON:0002616,1.86e-15,46;UBERON:0003056,2.80e-15,49;UBERON:0010314,3.60e-15,92;UBERON:0003080,9.83e-13,40;UBERON:0002020,2.44e-12,34;UBERON:0002780,3.33e-12,39;UBERON:0001890,3.33e-12,39;UBERON:0006240,3.33e-12,39;UBERON:0003528,2.85e-09,29;UBERON:0002791,2.85e-09,29;UBERON:0001893,2.85e-09,29;UBERON:0003076,2.95e-07,12;UBERON:0003057,2.95e-07,12 | |||
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| ||
|short_description=p2@Mib2 | |short_description=p2@Mib2 | ||
}} | }} |
Latest revision as of 20:07, 26 September 2015
Short description: | p2@Mib2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mib2_5end |
Coexpression cluster: | MCL_coexpression_mm9:321 |
Association with transcript: | 29bp_to_ENSMUST00000139289_5end |
EntrezGene: | Mib2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.47e-13 | 33 |
neuronal stem cell | 9.47e-13 | 33 |
neuroblast | 9.47e-13 | 33 |
electrically signaling cell | 9.47e-13 | 33 |
CNS neuron (sensu Vertebrata) | 1.60e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.60e-12 | 23 |
ectodermal cell | 1.58e-11 | 44 |
neurectodermal cell | 1.58e-11 | 44 |
neural cell | 3.37e-11 | 43 |
electrically responsive cell | 4.66e-09 | 39 |
electrically active cell | 4.66e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.40e-22 | 73 |
neurectoderm | 1.89e-21 | 64 |
neural plate | 1.89e-21 | 64 |
presumptive neural plate | 1.89e-21 | 64 |
nervous system | 6.37e-21 | 75 |
regional part of nervous system | 2.58e-19 | 54 |
neural tube | 5.78e-19 | 52 |
neural rod | 5.78e-19 | 52 |
future spinal cord | 5.78e-19 | 52 |
neural keel | 5.78e-19 | 52 |
ectoderm-derived structure | 5.34e-18 | 95 |
ectoderm | 5.34e-18 | 95 |
presumptive ectoderm | 5.34e-18 | 95 |
ecto-epithelium | 1.19e-17 | 73 |
brain | 6.57e-16 | 47 |
future brain | 6.57e-16 | 47 |
regional part of brain | 1.86e-15 | 46 |
pre-chordal neural plate | 2.80e-15 | 49 |
structure with developmental contribution from neural crest | 3.60e-15 | 92 |
anterior neural tube | 9.83e-13 | 40 |
gray matter | 2.44e-12 | 34 |
regional part of forebrain | 3.33e-12 | 39 |
forebrain | 3.33e-12 | 39 |
future forebrain | 3.33e-12 | 39 |
brain grey matter | 2.85e-09 | 29 |
regional part of telencephalon | 2.85e-09 | 29 |
telencephalon | 2.85e-09 | 29 |
posterior neural tube | 2.95e-07 | 12 |
chordal neural plate | 2.95e-07 | 12 |