FFCP PHASE1:Mm9::chr12:80108263..80108333,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268567 | |EntrezGene=268567 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BFQ2,G3UZR6 | |UniProt=Q8BFQ2,G3UZR6 | ||
|association_with_transcript=0bp_to_ENSMUST00000056660,ENSMUST00000174721,NM_178745,uc007nzp.2,uc007nzq.2_5end | |association_with_transcript=0bp_to_ENSMUST00000056660,ENSMUST00000174721,NM_178745,uc007nzp.2,uc007nzq.2_5end | ||
|cluster_id=chr12:80108263..80108333,- | |||
|description=CAGE_peak_1_at_Tmem229b_5end | |description=CAGE_peak_1_at_Tmem229b_5end | ||
|id=chr12:80108263..80108333,- | |id=chr12:80108263..80108333,- | ||
|ontology_enrichment_celltype=CL:0000221!1.61e-19!44;CL:0000133!1.61e-19!44;CL:0000540!5.32e-19!33;CL:0000047!5.32e-19!33;CL:0000031!5.32e-19!33;CL:0000404!5.32e-19!33;CL:0002319!6.11e-19!43;CL:0000117!1.13e-15!23;CL:0000337!1.13e-15!23;CL:0000055!1.15e-13!50;CL:0000393!3.22e-13!39;CL:0000211!3.22e-13!39 | |ontology_enrichment_celltype=CL:0000221!1.61e-19!44;CL:0000133!1.61e-19!44;CL:0000540!5.32e-19!33;CL:0000047!5.32e-19!33;CL:0000031!5.32e-19!33;CL:0000404!5.32e-19!33;CL:0002319!6.11e-19!43;CL:0000117!1.13e-15!23;CL:0000337!1.13e-15!23;CL:0000055!1.15e-13!50;CL:0000393!3.22e-13!39;CL:0000211!3.22e-13!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.40e-19,44;CL:0000133,1.40e-19,44;CL:0000540,4.63e-19,33;CL:0000047,4.63e-19,33;CL:0000031,4.63e-19,33;CL:0000404,4.63e-19,33;CL:0002319,5.32e-19,43;CL:0000117,1.01e-15,23;CL:0000337,1.01e-15,23;CL:0000393,3.10e-13,39;CL:0000211,3.10e-13,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.80e-35!73;UBERON:0005743!1.80e-35!73;UBERON:0000073!1.61e-33!75;UBERON:0001016!1.61e-33!75;UBERON:0004121!1.99e-31!102;UBERON:0000924!1.99e-31!102;UBERON:0006601!1.99e-31!102;UBERON:0002346!1.64e-28!71;UBERON:0003075!1.64e-28!71;UBERON:0007284!1.64e-28!71;UBERON:0001049!2.98e-25!52;UBERON:0005068!2.98e-25!52;UBERON:0006241!2.98e-25!52;UBERON:0007135!2.98e-25!52;UBERON:0000033!3.47e-25!63;UBERON:0000955!5.44e-23!50;UBERON:0006238!5.44e-23!50;UBERON:0002616!9.38e-23!49;UBERON:0003056!1.94e-20!49;UBERON:0002020!1.74e-19!34;UBERON:0003080!2.73e-18!40;UBERON:0002780!8.82e-18!39;UBERON:0001890!8.82e-18!39;UBERON:0006240!8.82e-18!39;UBERON:0002791!5.72e-16!29;UBERON:0003528!5.72e-16!29;UBERON:0001893!5.72e-16!29;UBERON:0007811!2.95e-14!86;UBERON:0000153!1.36e-12!94;UBERON:0000956!3.32e-11!21;UBERON:0001869!3.32e-11!21;UBERON:0000203!3.32e-11!21;UBERON:0002619!5.02e-09!17;UBERON:0003076!1.54e-07!12;UBERON:0003057!1.54e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.37e-35,73;UBERON:0001016,1.25e-33,75;UBERON:0004121,2.43e-31,95;UBERON:0000924,2.43e-31,95;UBERON:0006601,2.43e-31,95;UBERON:0002346,2.96e-29,64;UBERON:0003075,2.96e-29,64;UBERON:0007284,2.96e-29,64;UBERON:0000073,1.47e-26,54;UBERON:0010371,1.20e-25,73;UBERON:0001049,2.47e-25,52;UBERON:0005068,2.47e-25,52;UBERON:0006241,2.47e-25,52;UBERON:0007135,2.47e-25,52;UBERON:0000955,2.66e-21,47;UBERON:0006238,2.66e-21,47;UBERON:0002616,4.54e-21,46;UBERON:0003056,1.67e-20,49;UBERON:0002020,1.51e-19,34;UBERON:0003080,2.39e-18,40;UBERON:0010314,2.96e-18,92;UBERON:0002780,7.76e-18,39;UBERON:0001890,7.76e-18,39;UBERON:0006240,7.76e-18,39;UBERON:0003528,5.11e-16,29;UBERON:0002791,5.11e-16,29;UBERON:0001893,5.11e-16,29;UBERON:0000956,3.08e-11,21;UBERON:0001869,3.08e-11,21;UBERON:0000203,3.08e-11,21;UBERON:0002619,4.73e-09,17;UBERON:0003076,1.47e-07,12;UBERON:0003057,1.47e-07,12 | |||
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| ||
|short_description=p1@Tmem229b | |short_description=p1@Tmem229b | ||
}} | }} |
Latest revision as of 20:17, 26 September 2015
Short description: | p1@Tmem229b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem229b_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000056660, ENSMUST00000174721, NM_178745, uc007nzp.2, uc007nzq.2_5end |
EntrezGene: | Tmem229b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.40e-19 | 44 |
neurectodermal cell | 1.40e-19 | 44 |
neuron | 4.63e-19 | 33 |
neuronal stem cell | 4.63e-19 | 33 |
neuroblast | 4.63e-19 | 33 |
electrically signaling cell | 4.63e-19 | 33 |
neural cell | 5.32e-19 | 43 |
CNS neuron (sensu Vertebrata) | 1.01e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.01e-15 | 23 |
electrically responsive cell | 3.10e-13 | 39 |
electrically active cell | 3.10e-13 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.37e-35 | 73 |
nervous system | 1.25e-33 | 75 |
ectoderm-derived structure | 2.43e-31 | 95 |
ectoderm | 2.43e-31 | 95 |
presumptive ectoderm | 2.43e-31 | 95 |
neurectoderm | 2.96e-29 | 64 |
neural plate | 2.96e-29 | 64 |
presumptive neural plate | 2.96e-29 | 64 |
regional part of nervous system | 1.47e-26 | 54 |
ecto-epithelium | 1.20e-25 | 73 |
neural tube | 2.47e-25 | 52 |
neural rod | 2.47e-25 | 52 |
future spinal cord | 2.47e-25 | 52 |
neural keel | 2.47e-25 | 52 |
brain | 2.66e-21 | 47 |
future brain | 2.66e-21 | 47 |
regional part of brain | 4.54e-21 | 46 |
pre-chordal neural plate | 1.67e-20 | 49 |
gray matter | 1.51e-19 | 34 |
anterior neural tube | 2.39e-18 | 40 |
structure with developmental contribution from neural crest | 2.96e-18 | 92 |
regional part of forebrain | 7.76e-18 | 39 |
forebrain | 7.76e-18 | 39 |
future forebrain | 7.76e-18 | 39 |
brain grey matter | 5.11e-16 | 29 |
regional part of telencephalon | 5.11e-16 | 29 |
telencephalon | 5.11e-16 | 29 |
cerebral cortex | 3.08e-11 | 21 |
cerebral hemisphere | 3.08e-11 | 21 |
pallium | 3.08e-11 | 21 |
regional part of cerebral cortex | 4.73e-09 | 17 |
posterior neural tube | 1.47e-07 | 12 |
chordal neural plate | 1.47e-07 | 12 |