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FFCP PHASE1:Mm9::chr4:155266363..155266377,+: Difference between revisions

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(Created page with "{{FFCP |id=chr4:155266363..155266377,+ |short_description=p1@Acap3 |description=CAGE_peak_1_at_Acap3_5end |association_with_transcript=-3bp_to_ENSMUST00000131168_5end |En...")
 
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{{FFCP
{{FFCP
|id=chr4:155266363..155266377,+
|DHSsupport=NA
|short_description=p1@Acap3
|DPIdataset=NA
|description=CAGE_peak_1_at_Acap3_5end
|association_with_transcript=-3bp_to_ENSMUST00000131168_5end
|EntrezGene=140500
|EntrezGene=140500
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-3bp_to_ENSMUST00000131168_5end
|cluster_id=chr4:155266363..155266377,+
|description=CAGE_peak_1_at_Acap3_5end
|id=chr4:155266363..155266377,+
|ontology_enrichment_celltype=CL:0002319!4.90e-17!43;CL:0000221!1.08e-16!44;CL:0000133!1.08e-16!44;CL:0000540!1.19e-14!33;CL:0000047!1.19e-14!33;CL:0000031!1.19e-14!33;CL:0000404!1.19e-14!33;CL:0000055!1.15e-13!50;CL:0000393!4.65e-12!39;CL:0000211!4.65e-12!39;CL:0000117!6.32e-12!23;CL:0000337!6.32e-12!23
|ontology_enrichment_celltype_v019_2=CL:0002319,3.94e-17,43;CL:0000221,8.74e-17,44;CL:0000133,8.74e-17,44;CL:0000540,1.16e-14,33;CL:0000047,1.16e-14,33;CL:0000031,1.16e-14,33;CL:0000404,1.16e-14,33;CL:0000393,4.54e-12,39;CL:0000211,4.54e-12,39;CL:0000117,6.17e-12,23;CL:0000337,6.17e-12,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.50e-29!75;UBERON:0001016!2.50e-29!75;UBERON:0001017!4.54e-28!73;UBERON:0005743!4.54e-28!73;UBERON:0004121!6.81e-25!102;UBERON:0000924!6.81e-25!102;UBERON:0006601!6.81e-25!102;UBERON:0001049!2.16e-21!52;UBERON:0005068!2.16e-21!52;UBERON:0006241!2.16e-21!52;UBERON:0007135!2.16e-21!52;UBERON:0002020!1.07e-19!34;UBERON:0000955!1.70e-19!50;UBERON:0006238!1.70e-19!50;UBERON:0000033!4.28e-19!63;UBERON:0002616!7.16e-19!49;UBERON:0002346!1.32e-18!71;UBERON:0003075!1.32e-18!71;UBERON:0007284!1.32e-18!71;UBERON:0002791!5.53e-17!29;UBERON:0003528!5.53e-17!29;UBERON:0001893!5.53e-17!29;UBERON:0003080!3.44e-16!40;UBERON:0002780!7.73e-16!39;UBERON:0001890!7.73e-16!39;UBERON:0006240!7.73e-16!39;UBERON:0003056!2.21e-15!49;UBERON:0000956!1.90e-13!21;UBERON:0001869!1.90e-13!21;UBERON:0000203!1.90e-13!21;UBERON:0007811!5.47e-13!86;UBERON:0000153!1.36e-12!94;UBERON:0002619!7.54e-11!17;UBERON:0002021!5.24e-07!10;UBERON:0000411!5.24e-07!10;UBERON:0001950!5.24e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.94e-29,75;UBERON:0001017,3.54e-28,73;UBERON:0004121,1.10e-27,95;UBERON:0000924,1.10e-27,95;UBERON:0006601,1.10e-27,95;UBERON:0000073,1.04e-21,54;UBERON:0002346,1.16e-21,64;UBERON:0003075,1.16e-21,64;UBERON:0007284,1.16e-21,64;UBERON:0001049,2.06e-21,52;UBERON:0005068,2.06e-21,52;UBERON:0006241,2.06e-21,52;UBERON:0007135,2.06e-21,52;UBERON:0010371,3.01e-20,73;UBERON:0002020,1.03e-19,34;UBERON:0000955,8.62e-19,47;UBERON:0006238,8.62e-19,47;UBERON:0002616,3.61e-18,46;UBERON:0003528,5.34e-17,29;UBERON:0002791,5.34e-17,29;UBERON:0001893,5.34e-17,29;UBERON:0003080,3.33e-16,40;UBERON:0002780,7.49e-16,39;UBERON:0001890,7.49e-16,39;UBERON:0006240,7.49e-16,39;UBERON:0003056,2.15e-15,49;UBERON:0000956,1.85e-13,21;UBERON:0001869,1.85e-13,21;UBERON:0000203,1.85e-13,21;UBERON:0010314,1.90e-12,92;UBERON:0002619,7.39e-11,17;UBERON:0002021,5.18e-07,10;UBERON:0000411,5.18e-07,10;UBERON:0001950,5.18e-07,10
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4498510137285,1.03691978633434,4.34937519160848,1.69107881605257,1.34564891439581,3.64008679005615,2.91676782516071,3.22899558694328,2.70329800785245,0.704143431874524,3.1249052362548,2.41176492179135,0.724752362478018,1.44015003128933,1.89606672376907,3.44632865993279,2.46506297195585,1.55904987573354,1.61124026100733,3.77494574084403,2.64429988943931,3.10148007066612,3.33189284828887,2.89585865288999,3.62974266492626,2.53390489923356,4.04089734889384,1.75315353272353,8.38902419376282,0.443971906748129,0.62799699626633,1.00730769818447,2.89784391048286,4.31669693537719,4.02933573387983,4.07299920250225,3.00943262421218,11.8597886949584,9.20650473014354,10.8850147553485,14.4356673168698,15.7568979547248,17.3740596399631,13.5004500046361,13.0593148935024,15.8599843144472,10.3552062350364,2.90604573235695,6.3843979744165,4.43907374960749,5.59145449257076,4.19226325255965,3.8607136774503,5.11167473943715,3.7086310303001,1.92551525755089,5.05394423527595,4.05566879824384,3.77252682772152,4.02658482120494,4.28968521112624,6.26046611616185,4.28664322154766,5.33067899346335,6.55891349576597,6.1812885120496,5.2991611248383,0.685738504770831,2.48466128623072,4.05341522910446,2.0348498328526,2.82328141245992,3.46919892355874,3.47563148458268,3.15683653725411,3.80251518768413,1.12228454331548,4.27086065247027,5.1222330835293,2.86461730218783,4.95797891795091,4.24394544158511,7.74412791607632,3.97683734357194,4.51229213501426,3.63447830930802,5.07360263974886,2.31867835620421
|phase1_expression=3.68342348341026,1.74487703819681,0,0,0.500895729946347,2.85394762250213,1.16806320297763,2.06597317506522,6.89864738543167,4.21316147379588,0.513653904676515,1.51567102091139,3.0816131387617,4.72070173062586,2.6648780945253,4.85940641735582,6.29605690315332,2.20823515750766,2.33094537129756,2.54633791078818,4.33720779770456,3.87234709683453,3.91799683708403,0.47997726838022,2.06468352960453,0.57423196411502,2.15380998079537,2.15471232685889,0.380046838912748,1.51218077855958,1.10865255327652,9.52546010189447,7.38077745101484,0,0,1.16364251750945,0.408338712524738,12.9744805528441,7.0320181007142,14.1351410872926,11.1763982725893,16.3930916390027,14.5653105909346,1.76255545165808,1.82478476195126,2.75320128242522,7.04152209913235,5.01457859675027,8.34807494390993,7.97162586204562,7.27929392451885,0,4.02678254538567,5.80289713609076,2.68875039313971,4.88792928468299,5.44413535883638,1.54701627683233,16.589949790487,7.40587370980846,8.23980824558033,6.43804610931351,5.33576877666684,6.29929802096979,0.988866362566974,6.3943210345149,5.69240209984969,8.06858441175265,17.0050964185903,14.9856591548177,17.8776217148675,14.8538511889978,12.589506834242,13.8414603112898,19.2649396746655,11.0306254393203,5.50579404996943,6.38436690425939,4.45458946443106,14.9031505135119,17.1081893536506,13.022834263919,7.81712397203867,3.93933827022176,6.41752640662602,7.07108605136802,9.96601765593721,13.4207600994216,14.0093457666391,8.53958629206676,3.47837386442013,0.860423876981386,2.719885334831,0,0.649776417447669,0.448026887097336,2.10666630197628,4.60161870960756,2.85764605063156,3.5333957451034,2.95771181531029,3.84979432242953,2.54805239706646,0,0.865964164044856,0.253359865475099,1.51657333504435,0.91347103775248,1.8125651855302,2.22663208597237,2.94925055502431,2.43572382649713,2.30615497256059,2.41156224884196,3.17489509266403,2.51333182659351,1.73036477414062,2.74738778147832,4.42305275974937,4.36770494858005,4.63767188766826,1.93950101254089,1.86391761218122,6.73395833126558,14.4518227701284,1.02182822083437,2.03685711660064,3.59941638596045,2.92261522268049,6.44099749440738,7.32000964509802,21.8638572676384,14.0797699355744,14.8314965251592,6.2336413367868,11.6813709408785,2.85150218780886,2.61254638281195,1.51633655060205,2.94618598241064,1.56144531555244,3.21862946206862,4.50155324513373,3.91832526372859,6.19132142277083,4.61209393025459,6.65282244374075,3.10444044886819,3.44908788692548,3.59301552318857,2.99116911078713,3.28793598641362,2.22437799380478,6.61679116392116,4.93877127379064,1.79130840136644,2.80885274925294,1.54408744268829,3.6941254921427,1.86413195281952,0.234526059981096,1.08037236876609,0.473489471170421,1.77087808572663,1.23413690309903,1.16266972375204,1.07309360559848,2.45207218971056,3.45575684818309,3.61168420974009,2.99954595319666,3.50879969820798,2.63460138349261,3.08674763148855,15.1408762966172,15.4356918568927,0.330418782983798,0.528901133327089,1.49301775374664,1.39342003116263,2.19074684247559,2.62188582010345,2.00140239460383,1.52180500890047,2.37264530772256,1.81168850196412,1.50801125280162,1.79060824837036,1.75467678407208,3.59527763461689,0.216138049874694,0.995706366271836,2.65535061334314,1.82797620175566,3.38123207019241,1.4255592949172,0.969762435838129,1.61312385747733,2.40298841072178,2.50937251565324,2.04098346193787,0.740382983530803,2.07516838961004,2.66952169145751,1.37591296579242,3.14806957338795,1.21716072833102,2.894125917029,1.78238096246994,2.01387296215567,0.810676133875177,1.64736847912849,2.87536413054709,1.11642284300551,2.49630138491648,1.76805214562978,0.896987067609561,0,4.0645701836653,2.4633883530163,2.93336957595647,1.35796068620151,3.52035372432753,2.84760637651087,1.90434912708811,6.63454402716516,4.09851374676097,5.75808193086815,7.97273843287435,3.93271955317771,5.52591941970866,3.61622646453779,1.50791283939272,2.17562273527484,1.47529281905711,2.20749397043786,4.33486592967038,6.09500770279457,0.655739781506702,2.52470927204373,5.04813151066011,7.80877488593277,5.81643173878557,5.01834475700359,6.23836287430704,8.49229592366497,6.47697122679831,9.64444331107329,6.7198922250909,14.1381379225595,2.2710413633323,2.84904965867608,2.93196526836437,4.12425307431339,0,1.94224508923985,2.11626489875326,1.13163047853539,2.36241514304618,3.99665692327106,3.6179961043551,3.27180356529755,2.49548164869305,2.84433082142234,3.16255825724996,1.03135543248187,5.44703369206061,2.88097750450096,2.8458910432206,1.71469628025274,3.54680467284547,4.28085162244969,4.11372551505302,5.48036908406279,1.87737366450968,1.0591603543191,2.42581237860458,4.78170133530292,5.48979050766079,4.34253059482722,3.46179797609096,3.44695889464629,1.1659233465194,7.23158677840988,2.73393409276564,2.47664241555867,1.66675074632741,4.89757988212197,4.10082683163076,4.57556346413045,3.0596117398894,2.51912614182584,2.62579950228405,2.86401185404534,3.95419991976419,3.45643094115643,0.972048067396211,2.09088296014469,2.83871332870031,2.29269388854195,3.55409859618945,4.4498510137285,1.03691978633434,4.34937519160848,1.69107881605257,1.34564891439581,3.64008679005615,2.91676782516071,3.22899558694328,2.70329800785245,0.704143431874524,3.1249052362548,2.41176492179135,0.724752362478018,1.44015003128933,1.89606672376907,3.44632865993279,2.46506297195585,1.55904987573354,1.61124026100733,3.77494574084403,2.64429988943931,3.10148007066612,3.33189284828887,2.89585865288999,3.62974266492626,2.53390489923356,4.04089734889384,1.75315353272353,8.38902419376282,0.443971906748129,0.62799699626633,1.00730769818447,2.89784391048286,4.31669693537719,4.02933573387983,4.07299920250225,3.00943262421218,11.8597886949584,9.20650473014354,10.8850147553485,14.4356673168698,15.7568979547248,17.3740596399631,13.5004500046361,13.0593148935024,15.8599843144472,10.3552062350364,2.90604573235695,6.3843979744165,4.43907374960749,5.59145449257076,4.19226325255965,3.8607136774503,5.11167473943715,3.7086310303001,1.92551525755089,5.05394423527595,4.05566879824384,3.77252682772152,4.02658482120494,4.28968521112624,6.26046611616185,4.28664322154766,5.33067899346335,6.55891349576597,6.1812885120496,5.2991611248383,0.685738504770831,2.48466128623072,4.05341522910446,2.0348498328526,2.82328141245992,3.46919892355874,3.47563148458268,3.15683653725411,3.80251518768413,1.12228454331548,4.27086065247027,5.1222330835293,2.86461730218783,4.95797891795091,4.24394544158511,7.74412791607632,3.97683734357194,4.51229213501426,3.63447830930802,5.07360263974886,2.31867835620421
|short_description=p1@Acap3
}}
}}

Latest revision as of 20:22, 26 September 2015

Short description:p1@Acap3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Acap3_5end
Coexpression cluster:NA
Association with transcript: -3bp_to_ENSMUST00000131168_5end
EntrezGene:Acap3
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p1@Acap3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.52
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.72
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.86
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I39.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H216.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.35
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C316.59
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.88
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.59
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.42
Mouse Schwann, donor1.CNhs12507.11728-123D914.01
Mouse Schwann, donor2.CNhs12573.11746-123F98.54
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C13.17
adrenal gland, neonate N25.CNhs11223.1377-27I32.51
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I214.45
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A46.44
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F121.86
cortex, adult.CNhs10473.12-14D514.08
cortex, neonate N30.CNhs11107.1392-42F214.83
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B211.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C66.19
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G86.65
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I23.46
heart, neonate N10.CNhs11118.749-24G13.61
heart, neonate N16.CNhs11209.782-15G13.00
heart, neonate N20.CNhs11127.821-26I63.51
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E815.14
hippocampus, neonate N00.CNhs11228.627-43G115.44
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D52.40
kidney, neonate N20.CNhs11113.832-19I12.51
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C66.63
lung, neonate N06.CNhs11212.683-20E54.10
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E67.97
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C75.53
lung, neonate N30.CNhs11133.1394-42H23.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A36.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.49
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I914.14
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G64.12
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C34.78
skin, neonate N00.CNhs11124.650-25G45.49
skin, neonate N03.CNhs11215.662-22H34.34
skin, neonate N06.CNhs11097.693-20I53.46
skin, neonate N10.CNhs11108.762-6C43.45
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C97.23
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D14.90
spleen, neonate N20.CNhs11112.824-19H14.10
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.63
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A93.55
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F82.64
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C43.33
thymus, neonate N07.CNhs11211.713-19D32.90
thymus, neonate N10.CNhs11194.748-24E43.63
thymus, neonate N20.CNhs11186.820-7A22.53
thymus, neonate N25.CNhs11125.1362-25G74.04
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B48.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E54.03
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I82.91
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.56
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I57.74
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Cell type
Ontology termp-valuen
neural cell3.94e-1743
ectodermal cell8.74e-1744
neurectodermal cell8.74e-1744
neuron1.16e-1433
neuronal stem cell1.16e-1433
neuroblast1.16e-1433
electrically signaling cell1.16e-1433
electrically responsive cell4.54e-1239
electrically active cell4.54e-1239
CNS neuron (sensu Vertebrata)6.17e-1223
neuroblast (sensu Vertebrata)6.17e-1223

Uber anatomy
Ontology termp-valuen
nervous system1.94e-2975
central nervous system3.54e-2873
ectoderm-derived structure1.10e-2795
ectoderm1.10e-2795
presumptive ectoderm1.10e-2795
regional part of nervous system1.04e-2154
neurectoderm1.16e-2164
neural plate1.16e-2164
presumptive neural plate1.16e-2164
neural tube2.06e-2152
neural rod2.06e-2152
future spinal cord2.06e-2152
neural keel2.06e-2152
ecto-epithelium3.01e-2073
gray matter1.03e-1934
brain8.62e-1947
future brain8.62e-1947
regional part of brain3.61e-1846
brain grey matter5.34e-1729
regional part of telencephalon5.34e-1729
telencephalon5.34e-1729
anterior neural tube3.33e-1640
regional part of forebrain7.49e-1639
forebrain7.49e-1639
future forebrain7.49e-1639
pre-chordal neural plate2.15e-1549
cerebral cortex1.85e-1321
cerebral hemisphere1.85e-1321
pallium1.85e-1321
structure with developmental contribution from neural crest1.90e-1292
regional part of cerebral cortex7.39e-1117
occipital lobe5.18e-0710
visual cortex5.18e-0710
neocortex5.18e-0710