FFCP PHASE1:Mm9::chr12:83271234..83271291,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:83271234..83271291,+
|short_description=p3@Sipa1l1
|description=CAGE_peak_3_at_Sipa1l1_5end
|association_with_transcript=68bp_to_uc007ocx.1_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=217692 | |EntrezGene=217692 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TAF4 | |UniProt=Q3TAF4 | ||
|association_with_transcript=68bp_to_uc007ocx.1_5end | |||
|cluster_id=chr12:83271234..83271291,+ | |||
|description=CAGE_peak_3_at_Sipa1l1_5end | |||
|id=chr12:83271234..83271291,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.09e-14!73;UBERON:0005743!2.09e-14!73;UBERON:0000073!1.21e-13!75;UBERON:0001016!1.21e-13!75;UBERON:0004121!1.11e-10!102;UBERON:0000924!1.11e-10!102;UBERON:0006601!1.11e-10!102;UBERON:0001049!3.60e-10!52;UBERON:0005068!3.60e-10!52;UBERON:0006241!3.60e-10!52;UBERON:0007135!3.60e-10!52;UBERON:0000033!8.86e-10!63;UBERON:0000955!2.09e-09!50;UBERON:0006238!2.09e-09!50;UBERON:0002346!3.36e-09!71;UBERON:0003075!3.36e-09!71;UBERON:0007284!3.36e-09!71;UBERON:0002616!6.62e-09!49;UBERON:0002020!2.59e-08!34;UBERON:0002021!4.89e-08!10;UBERON:0000411!4.89e-08!10;UBERON:0001950!4.89e-08!10;UBERON:0003056!9.88e-08!49;UBERON:0003080!1.62e-07!40;UBERON:0002791!1.76e-07!29;UBERON:0003528!1.76e-07!29;UBERON:0001893!1.76e-07!29;UBERON:0000956!2.24e-07!21;UBERON:0001869!2.24e-07!21;UBERON:0000203!2.24e-07!21;UBERON:0007811!2.33e-07!86;UBERON:0000153!2.99e-07!94;UBERON:0002619!3.46e-07!17;UBERON:0002780!4.63e-07!39;UBERON:0001890!4.63e-07!39;UBERON:0006240!4.63e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.46e-16,73;UBERON:0001016,1.20e-14,75;UBERON:0004121,2.70e-13,95;UBERON:0000924,2.70e-13,95;UBERON:0006601,2.70e-13,95;UBERON:0010371,6.36e-12,73;UBERON:0002346,9.63e-12,64;UBERON:0003075,9.63e-12,64;UBERON:0007284,9.63e-12,64;UBERON:0001049,3.54e-10,52;UBERON:0005068,3.54e-10,52;UBERON:0006241,3.54e-10,52;UBERON:0007135,3.54e-10,52;UBERON:0000073,4.54e-10,54;UBERON:0000955,2.84e-09,47;UBERON:0006238,2.84e-09,47;UBERON:0002020,7.45e-09,34;UBERON:0002616,9.78e-09,46;UBERON:0002021,1.03e-08,10;UBERON:0000411,1.03e-08,10;UBERON:0001950,1.03e-08,10;UBERON:0010314,2.74e-08,92;UBERON:0003528,6.17e-08,29;UBERON:0002791,6.17e-08,29;UBERON:0001893,6.17e-08,29;UBERON:0002619,8.07e-08,17;UBERON:0000956,1.02e-07,21;UBERON:0001869,1.02e-07,21;UBERON:0000203,1.02e-07,21;UBERON:0003056,1.50e-07,49;UBERON:0003080,1.74e-07,40;UBERON:0002780,5.32e-07,39;UBERON:0001890,5.32e-07,39;UBERON:0006240,5.32e-07,39 | |||
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| ||
|short_description=p3@Sipa1l1 | |||
}} | }} |
Latest revision as of 21:29, 26 September 2015
Short description: | p3@Sipa1l1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sipa1l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 68bp_to_uc007ocx.1_5end |
EntrezGene: | Sipa1l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.46e-16 | 73 |
nervous system | 1.20e-14 | 75 |
ectoderm-derived structure | 2.70e-13 | 95 |
ectoderm | 2.70e-13 | 95 |
presumptive ectoderm | 2.70e-13 | 95 |
ecto-epithelium | 6.36e-12 | 73 |
neurectoderm | 9.63e-12 | 64 |
neural plate | 9.63e-12 | 64 |
presumptive neural plate | 9.63e-12 | 64 |
neural tube | 3.54e-10 | 52 |
neural rod | 3.54e-10 | 52 |
future spinal cord | 3.54e-10 | 52 |
neural keel | 3.54e-10 | 52 |
regional part of nervous system | 4.54e-10 | 54 |
brain | 2.84e-09 | 47 |
future brain | 2.84e-09 | 47 |
gray matter | 7.45e-09 | 34 |
regional part of brain | 9.78e-09 | 46 |
occipital lobe | 1.03e-08 | 10 |
visual cortex | 1.03e-08 | 10 |
neocortex | 1.03e-08 | 10 |
structure with developmental contribution from neural crest | 2.74e-08 | 92 |
brain grey matter | 6.17e-08 | 29 |
regional part of telencephalon | 6.17e-08 | 29 |
telencephalon | 6.17e-08 | 29 |
regional part of cerebral cortex | 8.07e-08 | 17 |
cerebral cortex | 1.02e-07 | 21 |
cerebral hemisphere | 1.02e-07 | 21 |
pallium | 1.02e-07 | 21 |
pre-chordal neural plate | 1.50e-07 | 49 |
anterior neural tube | 1.74e-07 | 40 |
regional part of forebrain | 5.32e-07 | 39 |
forebrain | 5.32e-07 | 39 |
future forebrain | 5.32e-07 | 39 |