FFCP PHASE1:Mm9::chr6:147212646..147212674,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19227 | |EntrezGene=19227 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=Q924X4 | |UniProt=Q924X4 | ||
|association_with_transcript=14bp_to_ENSMUST00000052296_5end | |association_with_transcript=14bp_to_ENSMUST00000052296_5end | ||
|cluster_id=chr6:147212646..147212674,- | |||
|description=CAGE_peak_3_at_Pthlh_5end | |description=CAGE_peak_3_at_Pthlh_5end | ||
|id=chr6:147212646..147212674,- | |id=chr6:147212646..147212674,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.20e-11,33;CL:0000047,1.20e-11,33;CL:0000031,1.20e-11,33;CL:0000404,1.20e-11,33;CL:0000221,2.07e-10,44;CL:0000133,2.07e-10,44;CL:0002319,1.95e-09,43;CL:0000393,2.60e-09,39;CL:0000211,2.60e-09,39;CL:0000068,2.15e-08,3;CL:0002202,2.15e-08,3;CL:0000069,2.15e-08,3;CL:0002632,2.15e-08,3;CL:0002368,2.15e-08,3;CL:0000307,2.15e-08,3;CL:0000377,2.15e-08,3;CL:0002321,4.80e-08,70;CL:0002612,6.37e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.03e-11!102;UBERON:0000924!4.03e-11!102;UBERON:0006601!4.03e-11!102;UBERON:0003102!3.87e-07!23;UBERON:0000073!7.88e-07!75;UBERON:0001016!7.88e-07!75 | |ontology_enrichment_uberon=UBERON:0004121!4.03e-11!102;UBERON:0000924!4.03e-11!102;UBERON:0006601!4.03e-11!102;UBERON:0003102!3.87e-07!23;UBERON:0000073!7.88e-07!75;UBERON:0001016!7.88e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.94e-13,95;UBERON:0000924,1.94e-13,95;UBERON:0006601,1.94e-13,95;UBERON:0001016,5.30e-12,75;UBERON:0001017,3.05e-11,73;UBERON:0001948,4.29e-11,5;UBERON:0002315,4.29e-11,5;UBERON:0002240,3.57e-09,6;UBERON:0005174,3.57e-09,6;UBERON:0001137,3.57e-09,6;UBERON:0010708,6.65e-09,8;UBERON:0010371,7.54e-09,73;UBERON:0003126,2.15e-08,3;UBERON:0001005,2.15e-08,3;UBERON:0007196,2.15e-08,3;UBERON:0001558,2.15e-08,3;UBERON:0000011,3.47e-08,3;UBERON:0003076,6.47e-08,12;UBERON:0003057,6.47e-08,12;UBERON:0003102,1.39e-07,22;UBERON:0000073,1.97e-07,54;UBERON:0002102,2.67e-07,7;UBERON:0004710,2.67e-07,7;UBERON:0005419,2.67e-07,7;UBERON:0005417,2.67e-07,7;UBERON:0005729,2.67e-07,7;UBERON:0000010,4.98e-07,11;UBERON:0002257,6.37e-07,3;UBERON:0001049,6.97e-07,52;UBERON:0005068,6.97e-07,52;UBERON:0006241,6.97e-07,52;UBERON:0007135,6.97e-07,52;UBERON:0010707,8.29e-07,13 | |||
|phase1_expression=1.12104192973356,0,0.909998478779072,0.30246421130683,0,0.671517087647559,0.700837921786577,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.639969691173627,0.45881856213434,1.14846392823004,0,0,0,0,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,1.05798195854407,0,0.338844532069132,0,0,0,0,0,0,0,0,0.210324961351382,2.28520787523043,3.75476519617743,0.122490799214954,0,0,0,0.127687338085188,1.0752457327937,0,0.0914876436024097,0,0.558365998002762,3.37657566019008,2.44477196442896,1.47314292736834,1.85083185038834,1.1183966749518,1.51452386666368,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,10.8245520505607,13.1747130047051,10.6160133453104,0.11418387971906,1.29468941823586,0.148442139064825,0.346970653532272,0.304465478312141,0.691846491768175,0.904335843315735,0.352766121407114,0,0,0.433798070759735,0,0.485300549842228,0.441683036920787,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0,0,0.898743836428936,0.915001205637253,0.125654352112864,1.21677024134594,0.511430914660661,1.24672826735736,1.29793010454206,0,0.373220911830279,0,0.631325567659422,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.408218994907967,0.512454881139399,0.562210347358373,0.258703370739016,0.431135985865684,0.756424320671277,1.40760899331159,1.31517439456545,1.94633074457919,1.0447564995665,1.23469281844766,0.199034266818493,0,0,0,0,0.703578179943289,0,0,0,0.154267112887378,0,0.268273401399619,0,0.329119699826961,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.420579897128254,0.102904612379284,0,0.264450566663544,0.213288250535234,0,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0,0,0,0.228497025219458,0,0,0.387904974335251,0.0701358198903186,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.814824882210129,0.509235257325564,0,0,0,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0.289298117163023,0,0,2.95058563811422,0.275936746304732,1.12385412991454,1.28932855251423,0,1.00988370881749,0.94652465824877,0.390438744296638,0.430846795465598,3.82350076724083,4.90157082981267,5.37845408498782,0.809621403349789,1.16902343164525,1.58115111178609,0.963963949265421,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,0,0,0.129358683782755,0,0.354680467284547,0.535106452806212,0.493647061806363,0,0,0,0,0.8244312647074,0.807322133479528,1.14594557363496,1.3130957840345,1.31312719796049,0.291480836629851,0.741701208042039,0.341741761595705,0.412773735926445,0.370389054739423,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,0.474503990371703,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0.539457385539283,0.578574190077352,0.523511883968059,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0.948033361884535,0.405450430580328,0.308132871494482,0.129920822977795,0.358053391334963,0,0.360586348559907,0,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0.680191150845634,0.221985953374065,0,0.167884616364078,3.28422309854724,0.563047426353546,0.915758121336325,0.214368379079066,0,1.6942555278512,0.920650473014354,1.14579102687879,1.03111909406213,0,2.2661816921691,0,0.900642406448441,0.453142408984205,0.51776031175182,0.103787347584177,0,0.512200817262403,0.243106717068294,0.628839487883947,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.754505365544305,0.280924522409647,0.320125762024346,0.17230640686684,0.476293691283074,0.347652977834566,0.38581844092741,0,0,0,0.354951612318675,0.715308569841963,0.145346416632329,0.752875043322645,0.507687647350059,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0.593175090620871,0.492522411877817,0,0.619747364743864,0.578719832943424,0.499621155875892,0.701794825336225,0,1.72159498861959,0.661774257358546,0.927471342481686 | |phase1_expression=1.12104192973356,0,0.909998478779072,0.30246421130683,0,0.671517087647559,0.700837921786577,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.639969691173627,0.45881856213434,1.14846392823004,0,0,0,0,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,1.05798195854407,0,0.338844532069132,0,0,0,0,0,0,0,0,0.210324961351382,2.28520787523043,3.75476519617743,0.122490799214954,0,0,0,0.127687338085188,1.0752457327937,0,0.0914876436024097,0,0.558365998002762,3.37657566019008,2.44477196442896,1.47314292736834,1.85083185038834,1.1183966749518,1.51452386666368,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,10.8245520505607,13.1747130047051,10.6160133453104,0.11418387971906,1.29468941823586,0.148442139064825,0.346970653532272,0.304465478312141,0.691846491768175,0.904335843315735,0.352766121407114,0,0,0.433798070759735,0,0.485300549842228,0.441683036920787,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0,0,0.898743836428936,0.915001205637253,0.125654352112864,1.21677024134594,0.511430914660661,1.24672826735736,1.29793010454206,0,0.373220911830279,0,0.631325567659422,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.408218994907967,0.512454881139399,0.562210347358373,0.258703370739016,0.431135985865684,0.756424320671277,1.40760899331159,1.31517439456545,1.94633074457919,1.0447564995665,1.23469281844766,0.199034266818493,0,0,0,0,0.703578179943289,0,0,0,0.154267112887378,0,0.268273401399619,0,0.329119699826961,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.420579897128254,0.102904612379284,0,0.264450566663544,0.213288250535234,0,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0,0,0,0.228497025219458,0,0,0.387904974335251,0.0701358198903186,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.814824882210129,0.509235257325564,0,0,0,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0.289298117163023,0,0,2.95058563811422,0.275936746304732,1.12385412991454,1.28932855251423,0,1.00988370881749,0.94652465824877,0.390438744296638,0.430846795465598,3.82350076724083,4.90157082981267,5.37845408498782,0.809621403349789,1.16902343164525,1.58115111178609,0.963963949265421,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,0,0,0.129358683782755,0,0.354680467284547,0.535106452806212,0.493647061806363,0,0,0,0,0.8244312647074,0.807322133479528,1.14594557363496,1.3130957840345,1.31312719796049,0.291480836629851,0.741701208042039,0.341741761595705,0.412773735926445,0.370389054739423,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,0.474503990371703,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0.539457385539283,0.578574190077352,0.523511883968059,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0.948033361884535,0.405450430580328,0.308132871494482,0.129920822977795,0.358053391334963,0,0.360586348559907,0,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0.680191150845634,0.221985953374065,0,0.167884616364078,3.28422309854724,0.563047426353546,0.915758121336325,0.214368379079066,0,1.6942555278512,0.920650473014354,1.14579102687879,1.03111909406213,0,2.2661816921691,0,0.900642406448441,0.453142408984205,0.51776031175182,0.103787347584177,0,0.512200817262403,0.243106717068294,0.628839487883947,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.754505365544305,0.280924522409647,0.320125762024346,0.17230640686684,0.476293691283074,0.347652977834566,0.38581844092741,0,0,0,0.354951612318675,0.715308569841963,0.145346416632329,0.752875043322645,0.507687647350059,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0.593175090620871,0.492522411877817,0,0.619747364743864,0.578719832943424,0.499621155875892,0.701794825336225,0,1.72159498861959,0.661774257358546,0.927471342481686 | ||
|short_description=p3@Pthlh | |short_description=p3@Pthlh | ||
}} | }} |
Latest revision as of 22:45, 26 September 2015
Short description: | p3@Pthlh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pthlh_5end |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | 14bp_to_ENSMUST00000052296_5end |
EntrezGene: | Pthlh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.20e-11 | 33 |
neuronal stem cell | 1.20e-11 | 33 |
neuroblast | 1.20e-11 | 33 |
electrically signaling cell | 1.20e-11 | 33 |
ectodermal cell | 2.07e-10 | 44 |
neurectodermal cell | 2.07e-10 | 44 |
neural cell | 1.95e-09 | 43 |
electrically responsive cell | 2.60e-09 | 39 |
electrically active cell | 2.60e-09 | 39 |
duct epithelial cell | 2.15e-08 | 3 |
epithelial cell of tracheobronchial tree | 2.15e-08 | 3 |
branched duct epithelial cell | 2.15e-08 | 3 |
epithelial cell of lower respiratory tract | 2.15e-08 | 3 |
respiratory epithelial cell | 2.15e-08 | 3 |
tracheal epithelial cell | 2.15e-08 | 3 |
tracheoblast | 2.15e-08 | 3 |
embryonic cell | 4.80e-08 | 70 |
neuron of the ventral spinal cord | 6.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.94e-13 | 95 |
ectoderm | 1.94e-13 | 95 |
presumptive ectoderm | 1.94e-13 | 95 |
nervous system | 5.30e-12 | 75 |
central nervous system | 3.05e-11 | 73 |
regional part of spinal cord | 4.29e-11 | 5 |
gray matter of spinal cord | 4.29e-11 | 5 |
spinal cord | 3.57e-09 | 6 |
dorsal region element | 3.57e-09 | 6 |
dorsum | 3.57e-09 | 6 |
pectoral complex | 6.65e-09 | 8 |
ecto-epithelium | 7.54e-09 | 73 |
trachea | 2.15e-08 | 3 |
respiratory airway | 2.15e-08 | 3 |
tracheobronchial tree | 2.15e-08 | 3 |
lower respiratory tract | 2.15e-08 | 3 |
parasympathetic nervous system | 3.47e-08 | 3 |
posterior neural tube | 6.47e-08 | 12 |
chordal neural plate | 6.47e-08 | 12 |
surface structure | 1.39e-07 | 22 |
regional part of nervous system | 1.97e-07 | 54 |
forelimb | 2.67e-07 | 7 |
pectoral appendage | 2.67e-07 | 7 |
pectoral appendage bud | 2.67e-07 | 7 |
forelimb bud | 2.67e-07 | 7 |
forelimb/pectoral fin field | 2.67e-07 | 7 |
peripheral nervous system | 4.98e-07 | 11 |
ventral horn of spinal cord | 6.37e-07 | 3 |
neural tube | 6.97e-07 | 52 |
neural rod | 6.97e-07 | 52 |
future spinal cord | 6.97e-07 | 52 |
neural keel | 6.97e-07 | 52 |
appendage girdle complex | 8.29e-07 | 13 |