FFCP PHASE1:Mm9::chr11:115489574..115489612,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67283 | |EntrezGene=67283 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1276 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DAM5 | |UniProt=Q9DAM5 | ||
|association_with_transcript=0bp_to_ENSMUST00000134171,NM_001252384,NM_001252394,NM_001252395,NM_001252396,NM_026071_5end | |association_with_transcript=0bp_to_ENSMUST00000134171,NM_001252384,NM_001252394,NM_001252395,NM_001252396,NM_026071_5end | ||
|cluster_id=chr11:115489574..115489612,- | |||
|description=CAGE_peak_3_at_Slc25a19_5end | |description=CAGE_peak_3_at_Slc25a19_5end | ||
|id=chr11:115489574..115489612,- | |id=chr11:115489574..115489612,- | ||
|ontology_enrichment_celltype=CL:0000117!3.77e-09!23;CL:0000337!3.77e-09!23 | |ontology_enrichment_celltype=CL:0000117!3.77e-09!23;CL:0000337!3.77e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.75e-10,23;CL:0000337,2.75e-10,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.23e-18!94;UBERON:0002020!1.24e-16!34;UBERON:0001049!2.04e-16!52;UBERON:0005068!2.04e-16!52;UBERON:0006241!2.04e-16!52;UBERON:0007135!2.04e-16!52;UBERON:0007811!4.74e-16!86;UBERON:0000955!1.58e-14!50;UBERON:0006238!1.58e-14!50;UBERON:0000033!3.26e-14!63;UBERON:0002791!3.53e-14!29;UBERON:0003528!3.53e-14!29;UBERON:0001893!3.53e-14!29;UBERON:0002616!7.11e-14!49;UBERON:0000073!7.55e-14!75;UBERON:0001016!7.55e-14!75;UBERON:0001017!1.93e-13!73;UBERON:0005743!1.93e-13!73;UBERON:0000956!6.25e-12!21;UBERON:0001869!6.25e-12!21;UBERON:0000203!6.25e-12!21;UBERON:0003080!7.97e-12!40;UBERON:0003056!1.09e-11!49;UBERON:0002780!2.16e-11!39;UBERON:0001890!2.16e-11!39;UBERON:0006240!2.16e-11!39;UBERON:0002346!6.68e-11!71;UBERON:0003075!6.68e-11!71;UBERON:0007284!6.68e-11!71;UBERON:0004121!9.83e-11!102;UBERON:0000924!9.83e-11!102;UBERON:0006601!9.83e-11!102;UBERON:0002619!1.53e-09!17;UBERON:0002021!5.00e-07!10;UBERON:0000411!5.00e-07!10;UBERON:0001950!5.00e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.85e-18,34;UBERON:0001049,1.62e-17,52;UBERON:0005068,1.62e-17,52;UBERON:0006241,1.62e-17,52;UBERON:0007135,1.62e-17,52;UBERON:0000073,2.11e-17,54;UBERON:0003528,1.21e-15,29;UBERON:0002791,1.21e-15,29;UBERON:0001893,1.21e-15,29;UBERON:0001016,3.06e-15,75;UBERON:0002346,3.73e-15,64;UBERON:0003075,3.73e-15,64;UBERON:0007284,3.73e-15,64;UBERON:0000955,5.94e-15,47;UBERON:0006238,5.94e-15,47;UBERON:0001017,8.93e-15,73;UBERON:0010371,1.43e-14,73;UBERON:0002616,3.21e-14,46;UBERON:0004121,3.90e-14,95;UBERON:0000924,3.90e-14,95;UBERON:0006601,3.90e-14,95;UBERON:0000956,4.91e-13,21;UBERON:0001869,4.91e-13,21;UBERON:0000203,4.91e-13,21;UBERON:0003080,1.21e-12,40;UBERON:0003056,3.33e-12,49;UBERON:0002780,3.76e-12,39;UBERON:0001890,3.76e-12,39;UBERON:0006240,3.76e-12,39;UBERON:0010314,1.30e-10,92;UBERON:0002619,2.65e-10,17;UBERON:0002021,7.51e-08,10;UBERON:0000411,7.51e-08,10;UBERON:0001950,7.51e-08,10 | |||
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|phase1_expression=1.60148847104794,0,0,0,0,0.16787927191189,0,1.29123323441576,0.703943610758334,0.234064526321993,0.68487187290202,0.8774937489487,0.856003649656029,1.04904482902797,0.333109761815663,0.202475267389826,0,0.788655413395594,0.548457734422955,0,2.29616883407888,0.0992909512008853,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0.498703936075477,0.612508068787107,0.418531630736908,0,0,0,0,0.971020706062307,0.629484089877886,0.608261587317087,0.367093504323363,0.782391344348039,3.2703773457067,1.75748946187577,0.777719596297134,1.95980990275508,2.87505128729943,0.167782606057736,0.725362142011344,0.672187598284928,0.514518872071894,0,1.03134418455488,1.61853168687678,3.1739458756322,2.53532561402472,0.677689064138264,1.77858959222228,0,0,0,0.898800331555214,1.15265491596466,5.28817022773236,10.2604513132085,7.99234853135252,3.99911378165325,4.41737081903227,6.61450315760752,7.85932862349538,11.0306254393203,2.20231761998777,1.27687338085188,1.99688493233117,1.97829431595291,1.46380229763855,2.6045668527838,1.95428099300967,2.25105044012672,2.59757021220577,3.83017161115768,3.13217697758026,3.54158947068071,1.4387976733305,2.64500460373749,0.869593466105033,0.860423876981386,0,0,0,0,0.702222100658759,0.511290967734173,0.259786004602869,0,4.08445917352373,0,0,0,0,0,0,0.91347103775248,1.03575153458869,0.593768556259299,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0.753999547978053,0.494389935468748,2.60278842455841,0.884610551949874,0.970601099684455,0.662524555381181,0.969750506270444,1.86391761218122,3.51336956413857,2.30391377494801,0,0,0,0.889491589511453,3.44518470631092,8.23501085073528,13.9476330845279,3.99795936442236,2.55715457330331,2.70124457927428,3.40706652442291,0.509196819251581,0.746441823660558,1.0108910337347,1.05220927943237,0.520481771850815,0.689706313300419,1.0803727788321,1.80845781402858,1.29269348387523,2.0498195245576,2.43624483855295,3.10444044886819,3.44908788692548,2.83659120251729,2.63926686245923,1.7535658594206,3.05851974148158,1.74126083261083,2.88094990971121,0,0,0.257347907114715,0,0.828503090142008,1.87620847984877,1.44049649168812,1.42046841351126,0.787056926989615,0.617068451549513,1.39520366850245,1.60964040839772,1.05088808130453,1.31647879930784,0.820837320395476,1.54030738137126,1.16959989940266,1.53685080703735,1.47627060636409,5.67782861123144,11.0107935245834,0.330418782983798,0,0.213288250535234,0.928946687441754,0.38660238396628,0.80673409849337,0.22237804384487,0.760902504450237,0.474529061544512,0.658795818896044,0.251335208800269,1.1937388322469,0,0.898819408654221,0.216138049874694,0.398282546508734,0.948339504765408,0.799739588268102,1.1270773567308,1.83286195060783,0.775809948670503,0.98190147846446,2.59269802209455,3.54264355151045,1.72698600625512,1.35736880313981,0,0,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0.358794827043824,0,3.14080423283228,0.568474235311454,0.814824882210129,1.01847051465113,0.469380496577004,2.51259386162724,3.33261097240419,1.36593553500459,1.57635144106191,1.55025282754142,0.956728611944923,2.29408640602033,2.24490476425664,1.59113964439663,0,0.54390568381871,0.491764273019036,0.551873492609465,4.33486592967038,2.69586879162067,0.163934945376675,1.00988370881749,0.315508219416257,0,0.215423397732799,0.238968797952552,1.33679204449436,0.283076530788832,0,0.292255857911312,0.395287777946524,12.5315313404505,0.283880170416537,1.6025904330053,0.651547837414304,0.989820737835213,0,0.242780636154981,1.209294227859,2.82907619633847,2.95301892880773,2.15204603560749,0.516856586336442,0.727067458955011,2.13898427030833,2.84433082142234,0,3.09406629744561,0.680879211507576,0.36012218806262,0,0.428674070063185,0.886701168211368,1.24858172321449,1.15184314421485,2.13125464380219,0.23467170806371,0.21183207086382,0.441056796109924,2.14352128823924,1.29171541356724,1.68876189798836,1.19372344003136,0.656563598980245,0.874442509889552,3.8939313422207,0.683483523191411,0.619160603889667,0.555583582109135,0.753473828018764,0.546776910884101,0,1.18984900995699,0.139951452323658,1.24379976423981,3.81868247206045,0.790839983952838,0.813277868507395,0.756037385752609,1.04544148007234,1.52853794622324,2.02296519577231,1.40510874733071,2.6175594198403,0.648074866458964,0,3.94585057078933,0.299033092087958,0.66183396182839,1.16670713006429,0.258319646955462,0.506868376472335,0.469428954583016,0.5208175393758,0.734015410979976,3.8653459332161,3.16833006883652,9.16432249821717,1.01362607645082,1.23253148597793,1.81889152168913,1.61124026100733,4.56967115996909,4.32703618271888,7.23678683155428,8.17828244579996,5.86792411243499,6.55370203389463,7.30934105548143,5.8689223400601,5.84384510907845,1.36038230169127,0.221985953374065,0.179427713218951,0,1.15913756419314,0.563047426353546,0.549454872801795,1.07184189539533,0.501572104035363,5.0827665835536,5.52390283808612,7.44764167471216,4.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| ||
|short_description=p3@Slc25a19 | |short_description=p3@Slc25a19 | ||
}} | }} |
Latest revision as of 23:23, 26 September 2015
Short description: | p3@Slc25a19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc25a19_5end |
Coexpression cluster: | MCL_coexpression_mm9:1276 |
Association with transcript: | 0bp_to_ENSMUST00000134171, NM_001252384, NM_001252394, NM_001252395, NM_001252396, NM_026071_5end |
EntrezGene: | Slc25a19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.75e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.75e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.85e-18 | 34 |
neural tube | 1.62e-17 | 52 |
neural rod | 1.62e-17 | 52 |
future spinal cord | 1.62e-17 | 52 |
neural keel | 1.62e-17 | 52 |
regional part of nervous system | 2.11e-17 | 54 |
brain grey matter | 1.21e-15 | 29 |
regional part of telencephalon | 1.21e-15 | 29 |
telencephalon | 1.21e-15 | 29 |
nervous system | 3.06e-15 | 75 |
neurectoderm | 3.73e-15 | 64 |
neural plate | 3.73e-15 | 64 |
presumptive neural plate | 3.73e-15 | 64 |
brain | 5.94e-15 | 47 |
future brain | 5.94e-15 | 47 |
central nervous system | 8.93e-15 | 73 |
ecto-epithelium | 1.43e-14 | 73 |
regional part of brain | 3.21e-14 | 46 |
ectoderm-derived structure | 3.90e-14 | 95 |
ectoderm | 3.90e-14 | 95 |
presumptive ectoderm | 3.90e-14 | 95 |
cerebral cortex | 4.91e-13 | 21 |
cerebral hemisphere | 4.91e-13 | 21 |
pallium | 4.91e-13 | 21 |
anterior neural tube | 1.21e-12 | 40 |
pre-chordal neural plate | 3.33e-12 | 49 |
regional part of forebrain | 3.76e-12 | 39 |
forebrain | 3.76e-12 | 39 |
future forebrain | 3.76e-12 | 39 |
structure with developmental contribution from neural crest | 1.30e-10 | 92 |
regional part of cerebral cortex | 2.65e-10 | 17 |
occipital lobe | 7.51e-08 | 10 |
visual cortex | 7.51e-08 | 10 |
neocortex | 7.51e-08 | 10 |