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FFCP PHASE1:Mm9::chr4:41670161..41670211,-: Difference between revisions

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(Created page with "{{FFCP |id=chr4:41670161..41670211,- |short_description=p1@Dctn3 |description=CAGE_peak_1_at_Dctn3_5end |association_with_transcript=0bp_to_ENSMUST00000030158,ENSMUST00000...")
 
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{{FFCP
{{FFCP
|id=chr4:41670161..41670211,-
|DHSsupport=NA
|short_description=p1@Dctn3
|DPIdataset=NA
|description=CAGE_peak_1_at_Dctn3_5end
|association_with_transcript=0bp_to_ENSMUST00000030158,ENSMUST00000147120,ENSMUST00000171641,NM_001159565,NM_016890,uc008sji.2,uc012dcd.1_5end
|EntrezGene=53598
|EntrezGene=53598
|HGNC=
|HGNC=
|MCL_coexpression_id=1606
|TSSclassifier=NA
|UniProt=Q9Z0Y1,E9Q919,A2AMR9
|UniProt=Q9Z0Y1,E9Q919,A2AMR9
|association_with_transcript=0bp_to_ENSMUST00000030158,ENSMUST00000147120,ENSMUST00000171641,NM_001159565,NM_016890,uc008sji.2,uc012dcd.1_5end
|cluster_id=chr4:41670161..41670211,-
|description=CAGE_peak_1_at_Dctn3_5end
|id=chr4:41670161..41670211,-
|ontology_enrichment_celltype=CL:0002321!1.69e-18!70;CL:0000220!1.69e-18!70;CL:0000055!4.62e-18!50;CL:0000221!3.87e-17!44;CL:0000133!3.87e-17!44;CL:0002319!1.01e-16!43;CL:0000393!7.38e-13!39;CL:0000211!7.38e-13!39;CL:0000144!8.34e-13!121;CL:0000012!8.34e-13!121;CL:0002371!4.11e-12!118;CL:0000540!9.27e-12!33;CL:0000047!9.27e-12!33;CL:0000031!9.27e-12!33;CL:0000404!9.27e-12!33;CL:0000117!2.21e-11!23;CL:0000337!2.21e-11!23;CL:0000548!8.40e-11!115;CL:0000004!8.40e-11!115;CL:0000255!8.40e-11!115
|ontology_enrichment_celltype_v019_2=CL:0002321,1.69e-18,70;CL:0000221,3.87e-17,44;CL:0000133,3.87e-17,44;CL:0002319,1.01e-16,43;CL:0000393,7.38e-13,39;CL:0000211,7.38e-13,39;CL:0000540,9.27e-12,33;CL:0000047,9.27e-12,33;CL:0000031,9.27e-12,33;CL:0000404,9.27e-12,33;CL:0000117,2.21e-11,23;CL:0000337,2.21e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.28e-28,75;UBERON:0001017,1.10e-27,73;UBERON:0004121,8.13e-23,95;UBERON:0000924,8.13e-23,95;UBERON:0006601,8.13e-23,95;UBERON:0000073,5.17e-22,54;UBERON:0001049,3.11e-21,52;UBERON:0005068,3.11e-21,52;UBERON:0006241,3.11e-21,52;UBERON:0007135,3.11e-21,52;UBERON:0010314,2.94e-19,92;UBERON:0000955,1.03e-18,47;UBERON:0006238,1.03e-18,47;UBERON:0002346,1.50e-18,64;UBERON:0003075,1.50e-18,64;UBERON:0007284,1.50e-18,64;UBERON:0002616,1.65e-18,46;UBERON:0002020,4.44e-18,34;UBERON:0010371,2.79e-17,73;UBERON:0003080,2.51e-16,40;UBERON:0002780,5.17e-16,39;UBERON:0001890,5.17e-16,39;UBERON:0006240,5.17e-16,39;UBERON:0003528,6.71e-16,29;UBERON:0002791,6.71e-16,29;UBERON:0001893,6.71e-16,29;UBERON:0003056,2.85e-13,49;UBERON:0000956,6.38e-12,21;UBERON:0001869,6.38e-12,21;UBERON:0000203,6.38e-12,21;UBERON:0002619,2.46e-10,17;UBERON:0002021,2.08e-07,10;UBERON:0000411,2.08e-07,10;UBERON:0001950,2.08e-07,10;UBERON:0000119,8.99e-07,176
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6.1161729270102,63.6151457440409,70.044579164847,76.6452598749083,71.2083748911853,71.4125857466902,120.931245196622,104.08082355331,88.8515217714304,161.216180463678,41.5655998002261,67.6725225969529,48.4183458976679,61.0925965049668,58.1209071688277,52.928114629235,52.6025714769558,54.6317184457954,85.7623628932322,102.826712234058,77.4227245539037,80.0764600396149,67.9946536431156,72.7556608675652,62.480316787951,64.7701216586924,68.2710153273423,70.8909730437971,68.1523537149996,71.4057778357349,69.57006774442,64.9069485726751,74.2755417463343,77.4893861463802,73.9141050585589,62.8220248048603,105.772636942572,79.4094235402091,71.2869601978783,88.2107634620555,60.2568843839302,70.5271967170127,69.7185224609155,206.134422555229,218.654487340909,226.293727808562,219.284660670545,195.248518134633,236.438289882976,231.532717579509,176.07559046067,188.507242137429,194.160116906932,80.6427690729053,57.8586066431495,75.122786531819,61.0197859841418,79.2337754733773,91.002536682757,74.6749005413427,73.1424453198075,73.4904989965257,66.4593666938787,67.9324523705843,62.2466926574051,68.9201494978334,63.1288002712011,64.4425961681981,60.0130051016673,62.3457673583323,61.1522228869945,67.9941736325456,66.681110820882,65.4880272056143,67.9732337590263,66.7621331852499,73.5452868159582,67.6646445186227,73.6147088657586,67.8662779357986,60.242963919266,72.5193967936902,73.5096375871637,67.2660552764067,68.7561286981433,83.0739017634469,67.8623364394531,63.2733684018144,88.6827551679708,77.6652940038756,65.1059293766344,69.628952873059,70.589254118245,82.54494948087
|phase1_expression=197.463528480211,150.059425284925,139.229767253198,138.831072989835,131.234681245943,95.3554264459534,89.4736413480863,74.1167876554648,35.47875798222,39.7909694747389,51.0229545312005,52.3305363009407,62.6594671548213,61.0194408884602,65.9557328395012,71.4737693886086,84.6469872535057,56.1522654337663,56.4911466455644,71.2974615020691,87.5945888556019,120.439923806674,123.286300473577,92.6356127973825,111.03409203651,161.359181916321,134.397742801631,121.956717700213,133.016393619462,128.535366177565,159.645967671819,51.4374845502301,48.590118219181,15.8481681015439,79.4341954316005,95.2524517904161,80.6468957236358,184.153917524239,228.931255945474,168.051121815589,272.35117895836,158.466552510359,174.783727091215,100.465660744511,98.2342463517096,114.349626596728,324.692407904436,184.449282297858,222.54210311002,189.180291799278,127.38764367908,185.440808030813,56.0393904232839,51.5007120828054,54.1111016619367,113.965930163925,106.303906217279,152.638939314123,188.356625060286,203.661527019733,158.457850876545,212.455521607346,168.966011261116,226.774728754913,247.216590641744,230.906037357483,181.557666974153,242.441750657901,138.114563594892,166.86733977797,168.470294042457,215.952144209276,204.524268921194,173.07949929073,156.51565417278,152.590318577263,128.835580769285,153.990929730736,147.61587845925,193.345297812464,178.949830886313,173.464152395401,224.742314196112,193.590337850898,159.674168926767,122.565491557046,129.700601207983,159.185126734807,114.87663528644,134.592948550185,97.6843326924654,109.273832376636,66.6371907033596,83.1142915122238,79.9224993460633,71.2362750484764,67.8346549236362,74.6484812891893,86.7685255373582,71.3745940510887,153.660170976358,74.4293569003043,135.046777044522,177.766675788333,99.8023699061697,101.343946190039,84.4225823174688,73.7627862985127,64.9934087954401,91.5887998029969,87.6100900168986,115.696881758614,108.619899207604,121.482448285414,76.079893516801,96.2606089585314,70.4505658042966,79.9634443767111,69.8842336040401,48.2065212843279,57.4187947997023,48.002650060387,95.0597982212423,94.2754166377182,92.3659977047337,97.0736809792647,108.07324230434,110.98200523378,123.512260715019,132.265134594458,145.485191696323,153.800926986146,158.701604335548,210.709536840192,153.139788840396,173.273668956365,64.8716747726515,64.9404386584686,119.790587497562,78.0739285338818,56.7325131317388,92.4206459822561,73.6454110903878,75.5031137356932,71.0301051139863,83.1458044648675,92.5773038650121,86.1482224560922,51.951886296815,35.55194307155,40.2928074335443,51.9493885853352,52.2728828544124,47.3622946470147,58.8536910126718,53.1421492405377,77.9456637917691,78.2337637628734,93.7739548005456,69.5942595719286,73.4066567740831,88.9506583617413,64.157823343592,83.0345057974044,80.9902342658736,77.8988714913866,85.8474884478781,103.804389364414,79.4824075082111,94.5604593095589,94.7694383591054,98.3925915372486,90.4546474999129,108.43878635838,148.044123789146,140.670605122482,127.87206901473,71.930554132484,56.0948098907665,61.5427180430162,46.7788884599199,57.8831715668993,60.4868279258047,84.6504036200888,89.6859926319127,86.3022522753817,95.7587145529027,90.5251947787236,96.1172949497262,70.1079138750293,99.8557790421087,100.367201720201,74.5394850745611,55.2962801031087,57.480945193271,61.2990496814396,64.5861782268194,62.5611513421642,72.5955446186474,87.0899873079653,103.148164191783,125.124724216706,85.3783566010989,54.2246593577306,61.7195244655457,54.1917690847498,53.7579321679533,56.1942782223131,69.0036058327648,57.8269236276129,60.1521691335381,59.5798266618137,40.2550978276593,56.937564993281,60.8473462573393,72.9952957267153,71.579567995243,90.699382016313,63.7398506074786,62.9111487078009,43.1857187571369,64.3333875087963,63.6010572861841,61.9773152534718,66.6522194480838,63.8087028495002,66.049125380494,68.875518480769,62.18735977642,73.4107649926506,71.146212528749,80.5695256299019,78.4114676484216,83.7614753080813,83.1081621402171,68.7082498298784,169.059771257145,165.620113154783,56.8854260457064,94.1716558472311,109.796860356857,107.761093425872,95.2171417978971,80.7714537079626,83.3267041068154,89.1691071984822,101.202675418724,111.641737722121,100.403095598417,111.819818114789,61.0342366395555,81.9101776869374,56.8475488143981,52.4604991052663,62.3902150197825,86.4299064711734,81.325036823518,86.946941767469,91.5435867930396,90.6933686434586,85.5397650386812,68.7078748712485,77.0034337310998,66.6837559244572,94.8767477174989,88.6965671934407,88.8547371017387,67.5229102617413,99.9942625640692,93.8796213438374,90.4435191575595,102.562070121191,108.931451638604,130.006533271934,86.8285319835728,91.5114546131703,130.773340046592,93.4905054178192,66.0389505186254,60.2526120032277,83.6800131461987,86.0098314664121,78.4083450534298,145.002586172219,61.6843879680248,59.4394179734081,56.6695253751318,68.9428552637169,55.2244679992942,72.0651245600546,110.825936355994,93.9074245091745,149.532371656387,123.15250972395,45.3942150788929,56.1161729270102,63.6151457440409,70.044579164847,76.6452598749083,71.2083748911853,71.4125857466902,120.931245196622,104.08082355331,88.8515217714304,161.216180463678,41.5655998002261,67.6725225969529,48.4183458976679,61.0925965049668,58.1209071688277,52.928114629235,52.6025714769558,54.6317184457954,85.7623628932322,102.826712234058,77.4227245539037,80.0764600396149,67.9946536431156,72.7556608675652,62.480316787951,64.7701216586924,68.2710153273423,70.8909730437971,68.1523537149996,71.4057778357349,69.57006774442,64.9069485726751,74.2755417463343,77.4893861463802,73.9141050585589,62.8220248048603,105.772636942572,79.4094235402091,71.2869601978783,88.2107634620555,60.2568843839302,70.5271967170127,69.7185224609155,206.134422555229,218.654487340909,226.293727808562,219.284660670545,195.248518134633,236.438289882976,231.532717579509,176.07559046067,188.507242137429,194.160116906932,80.6427690729053,57.8586066431495,75.122786531819,61.0197859841418,79.2337754733773,91.002536682757,74.6749005413427,73.1424453198075,73.4904989965257,66.4593666938787,67.9324523705843,62.2466926574051,68.9201494978334,63.1288002712011,64.4425961681981,60.0130051016673,62.3457673583323,61.1522228869945,67.9941736325456,66.681110820882,65.4880272056143,67.9732337590263,66.7621331852499,73.5452868159582,67.6646445186227,73.6147088657586,67.8662779357986,60.242963919266,72.5193967936902,73.5096375871637,67.2660552764067,68.7561286981433,83.0739017634469,67.8623364394531,63.2733684018144,88.6827551679708,77.6652940038756,65.1059293766344,69.628952873059,70.589254118245,82.54494948087
|short_description=p1@Dctn3
}}
}}

Latest revision as of 23:38, 26 September 2015

Short description:p1@Dctn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dctn3_5end
Coexpression cluster:MCL_coexpression_mm9:1606
Association with transcript: 0bp_to_ENSMUST00000030158, ENSMUST00000147120, ENSMUST00000171641, NM_001159565, NM_016890, uc008sji.2, uc012dcd.1_5end
EntrezGene:Dctn3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dctn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7197.46
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5150.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6139.23
CD326+ enterocyte, pool1.CNhs13542.11848-124I3138.83
CD326+ enterocyte, pool2.CNhs13197.11849-124I4131.23
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I795.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I889.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E974.12
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E735.48
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F239.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E651.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F152.33
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E462.66
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E861.02
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A165.96
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A371.47
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A584.65
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A256.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A456.49
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A671.30
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A387.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2120.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9123.29
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D192.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2111.03
GP2+ M cell, pool1.CNhs13228.11845-124H9161.36
GP2+ M cell, pool2.CNhs13231.11846-124I1134.40
GP2+ M cell, pool3.CNhs13240.11847-124I2121.96
Ileum epithelium, pool1.CNhs13199.10252-104B9133.02
Ileum epithelium, pool2.CNhs13232.10253-104C1128.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8159.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I351.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G648.59
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F579.43
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F695.25
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F780.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8184.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1228.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3168.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9272.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2158.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4174.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8100.47
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D998.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3114.35
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7324.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2184.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8222.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3189.18
Mouse Astrocytes, donor2.CNhs12078.11552-120C4127.39
Mouse Astrocytes, donor3.CNhs12107.11633-122C4185.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A256.04
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I951.50
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A154.11
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1113.97
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1106.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5152.64
Mouse Granule cells, donor1.CNhs12131.11713-123C3188.36
Mouse Granule cells, donor2.CNhs12357.11731-123E3203.66
Mouse Granule cells, donor3.CNhs12108.11636-122C7158.46
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6212.46
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1168.97
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7226.77
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7247.22
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2230.91
Mouse Microglia, donor1.CNhs12629.11718-123C8181.56
Mouse Microglia, donor2.CNhs12634.11736-123E8242.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5138.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5166.87
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9168.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1215.95
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5204.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2173.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2156.52
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6152.59
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3128.84
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3153.99
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7147.62
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4193.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4178.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8173.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4224.74
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5193.59
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6159.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6122.57
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6129.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1159.19
Mouse Schwann, donor1.CNhs12507.11728-123D9114.88
Mouse Schwann, donor2.CNhs12573.11746-123F9134.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G397.68
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7109.27
Mouse hepatocyte, donor1.CNhs13078.11714-123C466.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C883.11
Mouse hepatocyte, donor6.CNhs13090.11822-124F479.92
Mouse hepatocyte, donor8.CNhs13091.11824-124F671.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A767.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I774.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E386.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I871.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6153.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H174.43
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8135.05
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6177.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G199.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2101.34
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G384.42
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B673.76
accessory axillary lymph node, adult.CNhs10475.1063-29H964.99
adrenal gland, adult.CNhs10508.49-24D791.59
adrenal gland, embryo E14.CNhs11038.406-44C587.61
adrenal gland, embryo E16.CNhs11004.1254-43D6115.70
adrenal gland, embryo E17.CNhs11043.1263-45I1108.62
adrenal gland, embryo E18.CNhs11026.1262-18F5121.48
adrenal gland, neonate N00.CNhs11191.1311-23C176.08
adrenal gland, neonate N25.CNhs11223.1377-27I396.26
amnion, adult pregnant day17.5.CNhs10488.583-22A870.45
aorta, adult.CNhs10498.46-23H179.96
bone (os femoris), adult.CNhs10483.56-12G269.88
bone (os femoris), neonate N02.CNhs11227.1985-43F548.21
bone (os femoris), neonate N16.CNhs11225.1525-43A657.42
bone (os femoris), neonate N20.CNhs11195.1350-25C348.00
cecum, adult.CNhs10467.37-13H495.06
cerebellum, adult.CNhs10494.15-8B294.28
cerebellum, neonate N30.CNhs11135.1395-42I292.37
colon, adult.CNhs10468.36-18H797.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7108.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1110.98
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4123.51
corpora quadrigemina, adult.CNhs10501.16-22A4132.27
corpus striatum, adult.CNhs10487.19-21D8145.49
corpus striatum, neonate N00.CNhs11226.630-43F1153.80
cortex, adult.CNhs10473.12-14D5158.70
cortex, neonate N30.CNhs11107.1392-42F2210.71
diencephalon, adult.CNhs10482.20-12F2153.14
diencephalon, neonate N30.CNhs11201.1388-42B2173.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B164.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A264.94
epididymis, adult.CNhs10490.58-23B2119.79
eyeball, adult.CNhs10484.31-12G478.07
eyeball, embryo E12.CNhs11016.345-16C656.73
eyeball, embryo E14.CNhs10521.399-16E292.42
eyeball, embryo E15.CNhs10593.426-16C973.65
eyeball, embryo E17.CNhs11023.1261-18D475.50
eyeball, neonate N00.CNhs11207.633-15C671.03
eyeball, neonate N01.CNhs11140.1532-43E783.15
eyeball, neonate N02.CNhs11205.1551-44G892.58
eyeball, neonate N16.CNhs11188.777-19A286.15
forelimb, embryo E11.CNhs10596.335-25E251.95
forelimb, embryo E12.CNhs10600.359-14H235.55
forelimb, embryo E13.CNhs10589.384-1E240.29
forelimb, embryo E14.CNhs10577.413-26A851.95
forelimb, embryo E15.CNhs11007.437-20E752.27
forelimb, embryo E17.CNhs10598.1517-43C447.36
forelimb, embryo E18.CNhs11008.1520-43B558.85
gonad, embryo E13.CNhs11044.1564-45I653.14
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C877.95
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D278.23
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D593.77
heart, embryo E11.CNhs10586.331-24E969.59
heart, embryo E12.CNhs11015.353-12F573.41
heart, embryo E13.CNhs11013.376-3I988.95
heart, embryo E14.CNhs10597.403-26D464.16
heart, embryo E15.CNhs11017.431-16C883.03
heart, embryo E16.CNhs11021.457-17C680.99
heart, embryo E17.CNhs11025.479-18E577.90
heart, embryo E18.CNhs11030.1283-20G385.85
heart, neonate N00.CNhs11213.639-21E3103.80
heart, neonate N03.CNhs11221.1349-25I279.48
heart, neonate N10.CNhs11118.749-24G194.56
heart, neonate N16.CNhs11209.782-15G194.77
heart, neonate N20.CNhs11127.821-26I698.39
heart, neonate N25.CNhs11196.1351-25D390.45
heart, neonate N30.CNhs11202.1390-42D2108.44
hippocampus, adult.CNhs10478.13-16E8148.04
hippocampus, neonate N00.CNhs11228.627-43G1140.67
intestinal mucosa, adult.CNhs10506.860-29I3127.87
intestine, adult.CNhs10496.178-9A371.93
intestine, embryo E12.CNhs11019.1251-16I556.09
intestine, embryo E13.CNhs11010.381-16D561.54
intestine, embryo E15.CNhs10602.976-16D846.78
intestine, embryo E16.CNhs10585.463-22H457.88
intestine, embryo E17.CNhs10582.482-18D360.49
intestine, embryo E18.CNhs10526.1289-20F784.65
intestine, neonate N00.CNhs11126.644-26D189.69
intestine, neonate N01.CNhs11192.1322-23E986.30
intestine, neonate N06.CNhs11102.688-20B895.76
intestine, neonate N07.CNhs11095.720-20F290.53
intestine, neonate N10.CNhs11098.755-23A596.12
intestine, neonate N20.CNhs11187.827-18D170.11
intestine, neonate N25.CNhs11121.1352-25E399.86
intestine, neonate N30.CNhs11131.1384-42G1100.37
kidney, embryo E14.CNhs10606.411-4I974.54
kidney, embryo E15.CNhs10997.434-16F855.30
kidney, embryo E16.CNhs10584.464-22A557.48
kidney, embryo E17.CNhs11028.483-18I261.30
kidney, embryo E18.CNhs11001.1288-20C764.59
kidney, neonate N00.CNhs11214.646-21G762.56
kidney, neonate N10.CNhs11206.758-6D572.60
kidney, neonate N20.CNhs11113.832-19I187.09
kidney, neonate N25.CNhs11122.1353-25F3103.15
kidney, neonate N30.CNhs11203.1385-42H1125.12
liver, adult pregnant day01.CNhs10466.508-5B285.38
liver, embryo E12.CNhs10601.355-15F854.22
liver, embryo E13.CNhs10524.378-3H661.72
liver, embryo E14.CNhs10594.409-16E154.19
liver, embryo E15.CNhs10520.433-16D753.76
liver, embryo E16.CNhs10523.462-17F556.19
liver, embryo E17.CNhs10510.481-18A369.00
liver, embryo E18.CNhs10579.499-43G457.83
liver, neonate N00.CNhs11117.641-24F460.15
liver, neonate N03.CNhs11123.1345-25G259.58
liver, neonate N06.CNhs11101.684-20A840.26
liver, neonate N07.CNhs11103.716-20H256.94
liver, neonate N10.CNhs11115.751-24B960.85
liver, neonate N20.CNhs11220.823-25A373.00
liver, neonate N25.CNhs11198.1368-26H171.58
liver, neonate N30.CNhs11106.1382-42D190.70
lung, adult.CNhs10474.28-22B163.74
lung, embryo E12.CNhs10522.354-16G262.91
lung, embryo E14.CNhs10604.404-26F843.19
lung, embryo E15.CNhs11020.432-17C564.33
lung, embryo E16.CNhs10998.458-17B663.60
lung, embryo E17.CNhs10605.480-44A661.98
lung, embryo E18.CNhs10583.1287-20I666.65
lung, neonate N00.CNhs11224.640-42C663.81
lung, neonate N06.CNhs11212.683-20E566.05
lung, neonate N07.CNhs11111.715-19A368.88
lung, neonate N10.CNhs11219.750-23E662.19
lung, neonate N20.CNhs11109.822-18A473.41
lung, neonate N25.CNhs11119.1359-25C771.15
lung, neonate N30.CNhs11133.1394-42H280.57
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A178.41
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A183.76
mammary gland, adult lactating day02.CNhs10480.595-22B683.11
mammary gland, adult pregnant day19.CNhs10476.588-5H268.71
medulla oblongata, adult.CNhs10477.17-12C2169.06
medulla oblongata, neonate N30.CNhs11200.1396-42A3165.62
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C756.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C294.17
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1109.80
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2107.76
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E395.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D780.77
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D883.33
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D989.17
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4101.20
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5111.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6100.40
olfactory brain, adult.CNhs10489.18-22I9111.82
ovary, adult.CNhs10507.91-2I761.03
ovary, embryo E18.CNhs11040.505-44H781.91
ovary, neonate N00.CNhs11217.1299-22I456.85
oviduct, adult pregnant day01.CNhs10500.988-6G652.46
pancreas, adult.CNhs10486.34-16E462.39
pancreas, embryo E14.CNhs11012.405-44F486.43
pancreas, embryo E15.CNhs11042.1556-45F281.33
pancreas, embryo E16.CNhs11003.460-26E586.95
pancreas, embryo E17.CNhs10599.1558-45G391.54
pancreas, embryo E18.CNhs10580.1535-43I790.69
pancreas, neonate N00.CNhs11105.645-26G985.54
pancreas, neonate N01.CNhs11138.1531-43D768.71
pancreas, neonate N02.CNhs11139.1539-43D877.00
pancreas, neonate N16.CNhs11136.787-43B666.68
pancreas, neonate N25.CNhs11094.1555-45E294.88
pancreas, neonate N30.CNhs11182.1548-44H588.70
pituitary gland, adult.CNhs10493.21-1G888.85
pituitary gland, embryo E12.CNhs11018.346-16E667.52
pituitary gland, embryo E13.CNhs11009.370-44C799.99
pituitary gland, embryo E14.CNhs11037.398-44A593.88
pituitary gland, embryo E15.CNhs10592.427-16B990.44
pituitary gland, embryo E16.CNhs11036.449-43F6102.56
pituitary gland, embryo E17.CNhs11039.1265-44F5108.93
pituitary gland, neonate N00.CNhs11190.1308-22E9130.01
placenta, adult pregnant day10.CNhs10472.539-13I786.83
placenta, adult pregnant day17.CNhs10464.577-18G391.51
prostate, adult.CNhs10470.859-1F8130.77
skin, adult.CNhs10492.30-1C393.49
skin, neonate N00.CNhs11124.650-25G466.04
skin, neonate N03.CNhs11215.662-22H360.25
skin, neonate N06.CNhs11097.693-20I583.68
skin, neonate N10.CNhs11108.762-6C486.01
small intestine, neonate N16.CNhs11114.790-21I178.41
spinal cord, adult.CNhs10505.24-13C9145.00
spleen, adult.CNhs10465.25-2G261.68
spleen, embryo E16.CNhs11035.461-43C159.44
spleen, embryo E18.CNhs11011.1271-21F256.67
spleen, neonate N10.CNhs11116.752-24D168.94
spleen, neonate N20.CNhs11112.824-19H155.22
spleen, neonate N25.CNhs11099.1354-25G372.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6110.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C993.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3149.53
stomach, adult.CNhs10503.33-1H6123.15
stomach, embryo E12.CNhs10588.356-43E345.39
stomach, embryo E15.CNhs10603.1252-16G856.12
stomach, embryo E16.CNhs11022.459-17D463.62
stomach, embryo E17.CNhs11006.1035-18D570.04
stomach, embryo E18.CNhs10999.1286-20C676.65
stomach, neonate N03.CNhs11193.1340-24B871.21
stomach, neonate N07.CNhs11210.718-18A971.41
stomach, neonate N25.CNhs11104.1355-25E4120.93
stomach, neonate N30.CNhs11134.1386-42I1104.08
submandibular gland, adult.CNhs10469.59-29C188.85
testis, adult.CNhs10504.57-7G5161.22
testis, embryo E13.CNhs11031.389-23F541.57
testis, embryo E15.CNhs11034.443-27C567.67
testis, embryo E16.CNhs11033.470-26G548.42
testis, embryo E17.CNhs11029.486-18I561.09
testis, embryo E18.CNhs11027.503-18G558.12
testis, neonate N00.CNhs11189.1300-22B752.93
testis, neonate N07.CNhs11222.726-26I452.60
testis, neonate N10.CNhs11204.763-44D954.63
testis, neonate N20.CNhs11110.839-18H385.76
testis, neonate N30.CNhs11130.1391-42E2102.83
thymus, adult.CNhs10471.38-12B577.42
thymus, embryo E14.CNhs11041.402-44I480.08
thymus, embryo E15.CNhs11005.430-45I267.99
thymus, embryo E16.CNhs11002.456-26C572.76
thymus, embryo E17.CNhs10581.478-18C162.48
thymus, embryo E18.CNhs10595.1273-19G464.77
thymus, neonate N02.CNhs11181.1541-43F868.27
thymus, neonate N03.CNhs11137.2104-43C770.89
thymus, neonate N06.CNhs11197.681-26C468.15
thymus, neonate N07.CNhs11211.713-19D371.41
thymus, neonate N10.CNhs11194.748-24E469.57
thymus, neonate N20.CNhs11186.820-7A264.91
thymus, neonate N25.CNhs11125.1362-25G774.28
thymus, neonate N30.CNhs11132.1393-42G277.49
tongue, adult.CNhs10499.32-1B473.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H362.82
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7105.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G579.41
urinary bladder, adult.CNhs10481.879-12E471.29
uterus, adult pregnant day19.CNhs10497.590-15F588.21
uterus, adult.CNhs10509.92-27E560.26
vagina, adult.CNhs10502.89-27D570.53
vesicular gland, adult.CNhs10491.51-27F869.72
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1206.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2218.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3226.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7219.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4195.25
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5236.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6231.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7176.08
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8188.51
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9194.16
whole body, embryo E11.CNhs11014.324-5I880.64
whole body, embryo E12.CNhs10587.857-27C957.86
whole body, embryo E13.CNhs10512.372-23H275.12
whole body, embryo E14.5.CNhs10578.420-27D261.02
whole body, embryo E14.CNhs10519.395-14B179.23
whole body, embryo E16.CNhs10514.453-14F291.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G574.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G573.14
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G573.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G566.46
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G567.93
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G562.25
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G568.92
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G563.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G564.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G560.01
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G562.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G561.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G567.99
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G566.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G565.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G567.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G566.76
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G573.55
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G567.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G573.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G567.87
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G560.24
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G572.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G573.51
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G567.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G568.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G583.07
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G567.86
whole body, embryo E17.5.CNhs10513.490-9F963.27
whole body, embryo E17.CNhs10517.475-3I588.68
whole body, embryo E18.CNhs10516.493-3B377.67
whole body, neonate N00.CNhs10525.657-19C265.11
whole body, neonate N01.CNhs10576.659-23C669.63
whole body, neonate N06.CNhs10515.692-21D170.59
whole body, neonate N10.CNhs10518.761-6B482.54





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell1.69e-1870
ectodermal cell3.87e-1744
neurectodermal cell3.87e-1744
neural cell1.01e-1643
electrically responsive cell7.38e-1339
electrically active cell7.38e-1339
neuron9.27e-1233
neuronal stem cell9.27e-1233
neuroblast9.27e-1233
electrically signaling cell9.27e-1233
CNS neuron (sensu Vertebrata)2.21e-1123
neuroblast (sensu Vertebrata)2.21e-1123

Uber anatomy
Ontology termp-valuen
nervous system2.28e-2875
central nervous system1.10e-2773
ectoderm-derived structure8.13e-2395
ectoderm8.13e-2395
presumptive ectoderm8.13e-2395
regional part of nervous system5.17e-2254
neural tube3.11e-2152
neural rod3.11e-2152
future spinal cord3.11e-2152
neural keel3.11e-2152
structure with developmental contribution from neural crest2.94e-1992
brain1.03e-1847
future brain1.03e-1847
neurectoderm1.50e-1864
neural plate1.50e-1864
presumptive neural plate1.50e-1864
regional part of brain1.65e-1846
gray matter4.44e-1834
ecto-epithelium2.79e-1773
anterior neural tube2.51e-1640
regional part of forebrain5.17e-1639
forebrain5.17e-1639
future forebrain5.17e-1639
brain grey matter6.71e-1629
regional part of telencephalon6.71e-1629
telencephalon6.71e-1629
pre-chordal neural plate2.85e-1349
cerebral cortex6.38e-1221
cerebral hemisphere6.38e-1221
pallium6.38e-1221
regional part of cerebral cortex2.46e-1017
occipital lobe2.08e-0710
visual cortex2.08e-0710
neocortex2.08e-0710
cell layer8.99e-07176
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