FFCP PHASE1:Mm9::chr17:88408225..88408231,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:88408225..88408231,- to FFCP PHASE1:Mm9::chr17:88408225..88408231,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=225055 | |EntrezGene=225055 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=5 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-189bp_to_ENSMUST00000135639_5end | |||
|cluster_id=chr17:88408225..88408231,- | |||
|description=CAGE_peak_6_at_Fbxo11_5end | |||
|id=chr17:88408225..88408231,- | |||
|ontology_enrichment_celltype=CL:0000117!2.58e-08!23;CL:0000337!2.58e-08!23;CL:0000393!3.96e-07!39;CL:0000211!3.96e-07!39;CL:0000540!4.11e-07!33;CL:0000047!4.11e-07!33;CL:0000031!4.11e-07!33;CL:0000404!4.11e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.29e-15,23;CL:0000337,5.29e-15,23;CL:0000540,2.08e-10,33;CL:0000047,2.08e-10,33;CL:0000031,2.08e-10,33;CL:0000404,2.08e-10,33;CL:0000393,3.92e-08,39;CL:0000211,3.92e-08,39;CL:0002319,5.51e-07,43;CL:0000221,9.85e-07,44;CL:0000133,9.85e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!4.00e-10!50;UBERON:0006238!4.00e-10!50;UBERON:0002616!8.55e-10!49;UBERON:0000033!1.63e-09!63;UBERON:0002780!2.39e-09!39;UBERON:0001890!2.39e-09!39;UBERON:0006240!2.39e-09!39;UBERON:0003056!3.55e-09!49;UBERON:0003080!4.69e-09!40;UBERON:0007811!4.83e-09!86;UBERON:0002791!8.66e-09!29;UBERON:0003528!8.66e-09!29;UBERON:0001893!8.66e-09!29;UBERON:0000153!2.52e-08!94;UBERON:0002020!3.99e-08!34;UBERON:0001017!1.31e-07!73;UBERON:0005743!1.31e-07!73;UBERON:0001049!1.45e-07!52;UBERON:0005068!1.45e-07!52;UBERON:0006241!1.45e-07!52;UBERON:0007135!1.45e-07!52;UBERON:0002346!7.11e-07!71;UBERON:0003075!7.11e-07!71;UBERON:0007284!7.11e-07!71;UBERON:0000073!7.64e-07!75;UBERON:0001016!7.64e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.93e-14,54;UBERON:0002020,1.69e-13,34;UBERON:0003528,2.46e-13,29;UBERON:0002791,2.46e-13,29;UBERON:0001893,2.46e-13,29;UBERON:0002780,2.79e-12,39;UBERON:0001890,2.79e-12,39;UBERON:0006240,2.79e-12,39;UBERON:0003080,7.77e-12,40;UBERON:0001049,5.35e-11,52;UBERON:0005068,5.35e-11,52;UBERON:0006241,5.35e-11,52;UBERON:0007135,5.35e-11,52;UBERON:0002616,8.63e-11,46;UBERON:0001017,1.19e-10,73;UBERON:0000955,1.93e-10,47;UBERON:0006238,1.93e-10,47;UBERON:0001016,3.61e-10,75;UBERON:0003056,1.13e-09,49;UBERON:0002420,2.32e-09,8;UBERON:0007245,2.32e-09,8;UBERON:0010009,2.32e-09,8;UBERON:0010011,2.32e-09,8;UBERON:0000454,2.32e-09,8;UBERON:0002346,1.20e-08,64;UBERON:0003075,1.20e-08,64;UBERON:0007284,1.20e-08,64;UBERON:0004121,3.49e-07,95;UBERON:0000924,3.49e-07,95;UBERON:0006601,3.49e-07,95;UBERON:0010371,7.63e-07,73 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,2.25261955442667,1.63845168425395,1.02730780935303,0.319088635981346,0.171200729931206,0.262261207256992,0,0.202475267389826,0,0.473193248037357,0.548457734422955,0,0,0.198581902401771,0.261199789138935,0.639969691173627,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0.635030673459631,0,0,0,0,0.408338712524738,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0.377690453926732,0.202753862439029,0.917733760808408,0,0,0,0.58328969722285,0.139986421625363,0,2.34895648480831,2.17608642603403,0.336093799142464,0.771778308107841,0.573066879877513,0.515672092277442,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0.988866362566974,0,0,0,2.28117147078651,1.4850653216486,1.68259969081106,0,0.220868540951614,0.734944795289724,1.53352753629178,0.919218786610021,2.20231761998777,2.55374676170375,1.68967186581868,1.31886287730194,1.46380229763855,1.56274011167028,1.3959149950069,1.68828783009504,2.44477196442896,1.17851434189467,1.28134512719193,0.372798891650601,0.151452386666368,0,0.289864488701678,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.280888840263504,0.340860645156116,0.519572009205738,0.35333957451034,0,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0.461230994512117,0.904335843315735,0.470354828542819,0.376999773989026,0,0.433798070759735,0,0.323533699894818,0,0.969750506270444,0,1.46390398505774,0.83778682725382,0.255457055208591,0.838705871541442,0,0.381210681219194,0.299581278809645,0,1.38219787324151,0.347648640384553,0,1.0389402227978,1.1356888414743,0.407357455401265,0.124406970610093,0.252722758433675,0.420883711772948,0.780722657776222,0.919608417733892,0,0.753524089178575,0.272145996605311,1.15302348256365,0.374806898238915,0.776110112217047,0.431135985865684,0.756424320671277,0,0,2.22437799380478,0.348252166522167,0.61734640922383,0.398068533636986,0.702213187313235,0,0.284163499395593,0.414251545071004,1.17263029990548,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,1.86027155800326,0.268273401399619,0.233530684734339,0.16455984991348,1.47750717671186,0.243206428637567,0.730999937126662,0.658650345873152,0.134206418760372,0.420579897128254,0.514523061896422,0,0,0.426576501070468,0.928946687441754,0.902072229254653,0,0,0,1.42358718463353,0.658795818896044,0,1.39269530428806,0.58489226135736,0,0.648414149624083,0.199141273254367,0,0.685491075658373,2.25415471346161,1.01825663922657,0.581857461502877,0.420814919341911,0.569128834118316,0.738050739898011,0.627994911365499,0.246794327843601,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0.648540907100142,0.549122826376163,12.9391385874619,0,0.624075346229121,0.757736633841335,0.717589654087649,0.482443521363367,0.184753190166605,0.189491411770485,0.488894929326078,0.848725428875941,1.40814148973101,0.502518772325447,0,1.36593553500459,0.630540576424764,0.8858587585951,0.478364305972461,0.81931657357869,0.863424909329478,1.15719246865209,0,0,0,0.275936746304732,0.321101179975584,0.586058432961016,0.491804836130026,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,1.19484398976276,0.891194696329576,0,0.404810701674894,0.584511715822624,0.395287777946524,0.963963949265421,0.283880170416537,0.534196811001766,0.977321756121456,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,1.09060118843252,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.905510786479282,0.214337035031592,0.354680467284547,1.24858172321449,0.493647061806363,0.304464949114599,0.23467170806371,0.63549621259146,0.441056796109924,0,0.161464426695906,0.120625849856312,0.596861720015682,0.984845398470368,0.582961673259701,0.18542530201051,0.170870880797853,0.206386867963223,0.370389054739423,0.753473828018764,0.546776910884101,0,0.509935289981566,0.139951452323658,0.690999869022119,0,0,0.203319467126849,0.648032044930808,0,1.09181281873089,1.21377911746339,0.0826534557253359,0.26175594198403,0.777689839750757,0.621339313086926,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.387479470433193,1.01373675294467,1.64300134104056,0.39061315453185,0.419437377702843,0.966336483304024,0.576060012515731,0.316011120628178,1.01362607645082,0.410843828659309,0.51968329191118,0,0.198681354781265,0.240390899039938,0.738447635872886,0.908698049533329,0.685861259894999,1.00826185136841,0.584747284438515,0.577271049841977,0.935015217452552,0.226730383615211,0.221985953374065,0.0897138566094757,0.503653849092235,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0,2.25900737046827,0.920650473014354,0.572895513439397,0.343706364687375,2.05524755931193,1.5107877947794,2.02506750069542,2.70192721934532,0.906284817968409,2.5888015587591,1.3492355185943,0.798049746802062,0.170733605754134,1.215533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|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,2.25261955442667,1.63845168425395,1.02730780935303,0.319088635981346,0.171200729931206,0.262261207256992,0,0.202475267389826,0,0.473193248037357,0.548457734422955,0,0,0.198581902401771,0.261199789138935,0.639969691173627,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0.635030673459631,0,0,0,0,0.408338712524738,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0.377690453926732,0.202753862439029,0.917733760808408,0,0,0,0.58328969722285,0.139986421625363,0,2.34895648480831,2.17608642603403,0.336093799142464,0.771778308107841,0.573066879877513,0.515672092277442,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0.988866362566974,0,0,0,2.28117147078651,1.4850653216486,1.68259969081106,0,0.220868540951614,0.734944795289724,1.53352753629178,0.919218786610021,2.20231761998777,2.55374676170375,1.68967186581868,1.31886287730194,1.46380229763855,1.56274011167028,1.3959149950069,1.68828783009504,2.44477196442896,1.17851434189467,1.28134512719193,0.372798891650601,0.151452386666368,0,0.289864488701678,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.280888840263504,0.340860645156116,0.519572009205738,0.35333957451034,0,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0.461230994512117,0.904335843315735,0.470354828542819,0.376999773989026,0,0.433798070759735,0,0.323533699894818,0,0.969750506270444,0,1.46390398505774,0.83778682725382,0.255457055208591,0.838705871541442,0,0.381210681219194,0.299581278809645,0,1.38219787324151,0.347648640384553,0,1.0389402227978,1.1356888414743,0.407357455401265,0.124406970610093,0.252722758433675,0.420883711772948,0.780722657776222,0.919608417733892,0,0.753524089178575,0.272145996605311,1.15302348256365,0.374806898238915,0.776110112217047,0.431135985865684,0.756424320671277,0,0,2.22437799380478,0.348252166522167,0.61734640922383,0.398068533636986,0.702213187313235,0,0.284163499395593,0.414251545071004,1.17263029990548,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,1.86027155800326,0.268273401399619,0.233530684734339,0.16455984991348,1.47750717671186,0.243206428637567,0.730999937126662,0.658650345873152,0.134206418760372,0.420579897128254,0.514523061896422,0,0,0.426576501070468,0.928946687441754,0.902072229254653,0,0,0,1.42358718463353,0.658795818896044,0,1.39269530428806,0.58489226135736,0,0.648414149624083,0.199141273254367,0,0.685491075658373,2.25415471346161,1.01825663922657,0.581857461502877,0.420814919341911,0.569128834118316,0.738050739898011,0.627994911365499,0.246794327843601,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0.648540907100142,0.549122826376163,12.9391385874619,0,0.624075346229121,0.757736633841335,0.717589654087649,0.482443521363367,0.184753190166605,0.189491411770485,0.488894929326078,0.848725428875941,1.40814148973101,0.502518772325447,0,1.36593553500459,0.630540576424764,0.8858587585951,0.478364305972461,0.81931657357869,0.863424909329478,1.15719246865209,0,0,0,0.275936746304732,0.321101179975584,0.586058432961016,0.491804836130026,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,1.19484398976276,0.891194696329576,0,0.404810701674894,0.584511715822624,0.395287777946524,0.963963949265421,0.283880170416537,0.534196811001766,0.977321756121456,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,1.09060118843252,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.905510786479282,0.214337035031592,0.354680467284547,1.24858172321449,0.493647061806363,0.304464949114599,0.23467170806371,0.63549621259146,0.441056796109924,0,0.161464426695906,0.120625849856312,0.596861720015682,0.984845398470368,0.582961673259701,0.18542530201051,0.170870880797853,0.206386867963223,0.370389054739423,0.753473828018764,0.546776910884101,0,0.509935289981566,0.139951452323658,0.690999869022119,0,0,0.203319467126849,0.648032044930808,0,1.09181281873089,1.21377911746339,0.0826534557253359,0.26175594198403,0.777689839750757,0.621339313086926,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.387479470433193,1.01373675294467,1.64300134104056,0.39061315453185,0.419437377702843,0.966336483304024,0.576060012515731,0.316011120628178,1.01362607645082,0.410843828659309,0.51968329191118,0,0.198681354781265,0.240390899039938,0.738447635872886,0.908698049533329,0.685861259894999,1.00826185136841,0.584747284438515,0.577271049841977,0.935015217452552,0.226730383615211,0.221985953374065,0.0897138566094757,0.503653849092235,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0,2.25900737046827,0.920650473014354,0.572895513439397,0.343706364687375,2.05524755931193,1.5107877947794,2.02506750069542,2.70192721934532,0.906284817968409,2.5888015587591,1.3492355185943,0.798049746802062,0.170733605754134,1.215533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| ||
|short_description=p6@Fbxo11 | |||
}} | }} |
Latest revision as of 00:29, 27 September 2015
Short description: | p6@Fbxo11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Fbxo11_5end |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | -189bp_to_ENSMUST00000135639_5end |
EntrezGene: | Fbxo11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.29e-15 | 23 |
neuroblast (sensu Vertebrata) | 5.29e-15 | 23 |
neuron | 2.08e-10 | 33 |
neuronal stem cell | 2.08e-10 | 33 |
neuroblast | 2.08e-10 | 33 |
electrically signaling cell | 2.08e-10 | 33 |
electrically responsive cell | 3.92e-08 | 39 |
electrically active cell | 3.92e-08 | 39 |
neural cell | 5.51e-07 | 43 |
ectodermal cell | 9.85e-07 | 44 |
neurectodermal cell | 9.85e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.93e-14 | 54 |
gray matter | 1.69e-13 | 34 |
brain grey matter | 2.46e-13 | 29 |
regional part of telencephalon | 2.46e-13 | 29 |
telencephalon | 2.46e-13 | 29 |
regional part of forebrain | 2.79e-12 | 39 |
forebrain | 2.79e-12 | 39 |
future forebrain | 2.79e-12 | 39 |
anterior neural tube | 7.77e-12 | 40 |
neural tube | 5.35e-11 | 52 |
neural rod | 5.35e-11 | 52 |
future spinal cord | 5.35e-11 | 52 |
neural keel | 5.35e-11 | 52 |
regional part of brain | 8.63e-11 | 46 |
central nervous system | 1.19e-10 | 73 |
brain | 1.93e-10 | 47 |
future brain | 1.93e-10 | 47 |
nervous system | 3.61e-10 | 75 |
pre-chordal neural plate | 1.13e-09 | 49 |
basal ganglion | 2.32e-09 | 8 |
nuclear complex of neuraxis | 2.32e-09 | 8 |
aggregate regional part of brain | 2.32e-09 | 8 |
collection of basal ganglia | 2.32e-09 | 8 |
cerebral subcortex | 2.32e-09 | 8 |
neurectoderm | 1.20e-08 | 64 |
neural plate | 1.20e-08 | 64 |
presumptive neural plate | 1.20e-08 | 64 |
ectoderm-derived structure | 3.49e-07 | 95 |
ectoderm | 3.49e-07 | 95 |
presumptive ectoderm | 3.49e-07 | 95 |
ecto-epithelium | 7.63e-07 | 73 |