FFCP PHASE1:Mm9::chr1:194861950..194862024,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=329324 | |EntrezGene=329324 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt=B7ZP31 | |UniProt=B7ZP31 | ||
|association_with_transcript=-39bp_to_ENSMUST00000164191_5end | |association_with_transcript=-39bp_to_ENSMUST00000164191_5end | ||
|cluster_id=chr1:194861950..194862024,- | |||
|description=CAGE_peak_2_at_Syt14_5end | |description=CAGE_peak_2_at_Syt14_5end | ||
|id=chr1:194861950..194862024,- | |id=chr1:194861950..194862024,- | ||
|ontology_enrichment_celltype=CL:0000117!1.00e-11!23;CL:0000337!1.00e-11!23;CL:0000540!1.30e-11!33;CL:0000047!1.30e-11!33;CL:0000031!1.30e-11!33;CL:0000404!1.30e-11!33;CL:0000393!1.34e-07!39;CL:0000211!1.34e-07!39;CL:0000221!2.99e-07!44;CL:0000133!2.99e-07!44;CL:0002319!5.34e-07!43 | |ontology_enrichment_celltype=CL:0000117!1.00e-11!23;CL:0000337!1.00e-11!23;CL:0000540!1.30e-11!33;CL:0000047!1.30e-11!33;CL:0000031!1.30e-11!33;CL:0000404!1.30e-11!33;CL:0000393!1.34e-07!39;CL:0000211!1.34e-07!39;CL:0000221!2.99e-07!44;CL:0000133!2.99e-07!44;CL:0002319!5.34e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.84e-12,23;CL:0000337,1.84e-12,23;CL:0000540,2.44e-12,33;CL:0000047,2.44e-12,33;CL:0000031,2.44e-12,33;CL:0000404,2.44e-12,33;CL:0000393,1.79e-08,39;CL:0000211,1.79e-08,39;CL:0000221,8.85e-07,44;CL:0000133,8.85e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.61e-28!71;UBERON:0003075!2.61e-28!71;UBERON:0007284!2.61e-28!71;UBERON:0000033!1.07e-24!63;UBERON:0001017!2.75e-24!73;UBERON:0005743!2.75e-24!73;UBERON:0004121!1.27e-23!102;UBERON:0000924!1.27e-23!102;UBERON:0006601!1.27e-23!102;UBERON:0000073!3.88e-23!75;UBERON:0001016!3.88e-23!75;UBERON:0003056!8.23e-23!49;UBERON:0001049!1.25e-22!52;UBERON:0005068!1.25e-22!52;UBERON:0006241!1.25e-22!52;UBERON:0007135!1.25e-22!52;UBERON:0000955!1.38e-22!50;UBERON:0006238!1.38e-22!50;UBERON:0002616!7.95e-22!49;UBERON:0000153!2.25e-19!94;UBERON:0003080!4.43e-19!40;UBERON:0007811!9.34e-19!86;UBERON:0002780!1.94e-18!39;UBERON:0001890!1.94e-18!39;UBERON:0006240!1.94e-18!39;UBERON:0002020!2.91e-16!34;UBERON:0002791!1.16e-14!29;UBERON:0003528!1.16e-14!29;UBERON:0001893!1.16e-14!29;UBERON:0000956!1.74e-10!21;UBERON:0001869!1.74e-10!21;UBERON:0000203!1.74e-10!21;UBERON:0002619!2.94e-08!17;UBERON:0000468!3.52e-08!333;UBERON:0002021!2.00e-07!10;UBERON:0000411!2.00e-07!10;UBERON:0001950!2.00e-07!10;UBERON:0000922!8.84e-07!328 | |ontology_enrichment_uberon=UBERON:0002346!2.61e-28!71;UBERON:0003075!2.61e-28!71;UBERON:0007284!2.61e-28!71;UBERON:0000033!1.07e-24!63;UBERON:0001017!2.75e-24!73;UBERON:0005743!2.75e-24!73;UBERON:0004121!1.27e-23!102;UBERON:0000924!1.27e-23!102;UBERON:0006601!1.27e-23!102;UBERON:0000073!3.88e-23!75;UBERON:0001016!3.88e-23!75;UBERON:0003056!8.23e-23!49;UBERON:0001049!1.25e-22!52;UBERON:0005068!1.25e-22!52;UBERON:0006241!1.25e-22!52;UBERON:0007135!1.25e-22!52;UBERON:0000955!1.38e-22!50;UBERON:0006238!1.38e-22!50;UBERON:0002616!7.95e-22!49;UBERON:0000153!2.25e-19!94;UBERON:0003080!4.43e-19!40;UBERON:0007811!9.34e-19!86;UBERON:0002780!1.94e-18!39;UBERON:0001890!1.94e-18!39;UBERON:0006240!1.94e-18!39;UBERON:0002020!2.91e-16!34;UBERON:0002791!1.16e-14!29;UBERON:0003528!1.16e-14!29;UBERON:0001893!1.16e-14!29;UBERON:0000956!1.74e-10!21;UBERON:0001869!1.74e-10!21;UBERON:0000203!1.74e-10!21;UBERON:0002619!2.94e-08!17;UBERON:0000468!3.52e-08!333;UBERON:0002021!2.00e-07!10;UBERON:0000411!2.00e-07!10;UBERON:0001950!2.00e-07!10;UBERON:0000922!8.84e-07!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.92e-28,64;UBERON:0003075,6.92e-28,64;UBERON:0007284,6.92e-28,64;UBERON:0001017,6.21e-25,73;UBERON:0000073,1.14e-24,54;UBERON:0003056,3.39e-24,49;UBERON:0001049,1.43e-23,52;UBERON:0005068,1.43e-23,52;UBERON:0006241,1.43e-23,52;UBERON:0007135,1.43e-23,52;UBERON:0010371,2.17e-23,73;UBERON:0001016,2.61e-23,75;UBERON:0004121,1.13e-22,95;UBERON:0000924,1.13e-22,95;UBERON:0006601,1.13e-22,95;UBERON:0000955,5.64e-22,47;UBERON:0006238,5.64e-22,47;UBERON:0002616,3.54e-21,46;UBERON:0003080,3.41e-20,40;UBERON:0002780,1.66e-19,39;UBERON:0001890,1.66e-19,39;UBERON:0006240,1.66e-19,39;UBERON:0010314,3.19e-19,92;UBERON:0002020,3.57e-17,34;UBERON:0003528,1.87e-15,29;UBERON:0002791,1.87e-15,29;UBERON:0001893,1.87e-15,29;UBERON:0000956,5.56e-11,21;UBERON:0001869,5.56e-11,21;UBERON:0000203,5.56e-11,21;UBERON:0002619,1.34e-08,17;UBERON:0002021,7.47e-08,10;UBERON:0000411,7.47e-08,10;UBERON:0001950,7.47e-08,10;UBERON:0000922,5.88e-07,320 | |||
|phase1_expression=4.00372117761985,0,0,0,0,0.33575854382378,0,0,0.422366166455,0,0,0.0797721589953364,0.342401459862411,0,0,0.202475267389826,0,0,0,0,5.18764069921526,0,0,0.159992422793407,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0.7813353445238,0,0,0,0,0,0,0,1.56478268869608,0.65407546914134,0,0.58328969722285,0.139986421625363,0,0,0,0,0,0.286533439938757,1.03134418455488,13.9598357993122,11.1088105647127,17.1134478946668,1.69422266034566,0,0,0,0,0.599200221036809,0.384218305321555,13.7907184370275,9.99043943654511,11.7781978356774,3.99911378165325,3.53389665522582,16.7812394924487,14.185129710699,9.19218786610021,6.60695285996332,8.42736431362239,9.83081812839958,12.924856197559,13.0827330351446,15.6274011167028,3.90856198601933,9.56696437053856,9.32069311438542,8.2496003932627,10.5355043791336,12.8615617619457,0.227178579999552,0.529000920747499,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,5.21120653173718,0,0,0,0,0,0,0.34255163915718,0.258937883647172,8.16431764856536,3.81667718885499,3.95805121805784,3.45923245884088,4.06951129492081,5.76184664964954,4.52399728786832,3.21353458054686,0.578397427679647,0,0.647067399789637,1.32504911076236,0.484875253135222,0,14.3462590535658,17.8029700791437,0,0.11981512450592,0.599902730993408,0,14.5296920222678,20.5875271268382,23.3717094929928,17.7300806596122,12.5300574091862,8.72709787150152,12.3303359931496,1.32391173005411,0.373220911830279,1.26361379216837,4.41927897361595,5.85541993332167,6.43725892413724,6.84236093260327,6.93242162044289,9.32100038373192,8.96796041993949,8.80796210861451,8.79591460512653,5.38919982332106,7.56424320671277,6.15828934573821,2.6303487891309,4.44875598760957,1.39300866608867,1.02891068203972,4.37875387000685,0,0.257347907114715,0,1.44988040774851,2.81431271977315,2.34080679899319,0.946978942340841,1.37734962223183,1.23413690309903,0,0,0.233530684734339,0.16455984991348,0,0,0,0.219550115291051,0,15.9820360908737,14.7153595702377,0,0,2.98603550749328,5.10920678092965,2.06187938115349,2.42020229548011,1.77902435075896,1.52180500890047,0,1.64698954724011,0.251335208800269,0.795825888164603,0.19496408711912,0,0.432276099749388,0.199141273254367,2.0863469104839,3.65595240351132,0,2.8511185898344,3.10323979468201,3.36651935473529,2.40298841072178,1.91893192373483,1.41298855057237,1.60416313098341,0,2.16898637430922,3.14494392181125,3.37293168577281,1.82574109249653,2.17059443777175,2.03700681425136,1.72617682470486,0.486405680325106,0.549122826376163,1.43768206527355,1.48856379067401,0.624075346229121,0.252578877947112,0,0,0.554259570499814,1.89491411770485,1.14075483509418,2.54617628662782,0.938760993154008,0.167506257441816,0.714130922658041,0.585400943573396,0.315270288212382,0.44292937929755,0.637819074629948,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,6.74312477948726,8.90808818100744,0,0,2.52406575533005,2.73307121007647,4.73931475012158,2.62865677747807,2.22798674082394,1.98153571552183,3.23848561339915,4.9683495844923,5.13874111330481,21.2072068838393,4.5420827266646,1.42452482933804,3.4206261464251,1.15479086080775,0,1.21390318077491,1.81394134178851,1.13163047853539,0.590603785761546,4.91896236710284,1.80899805217755,3.27180356529755,1.78248689192361,0.948110273807448,0,0,21.1072555567349,6.48219938512717,2.19909762430683,6.64444808597936,7.44828981297549,7.84822797449111,8.88564711251453,5.17590413494819,0.469343416127421,4.02480934641258,0,0,1.77610869365496,1.20625849856312,0.477489376012546,0,0.582961673259701,7.04616147639937,0,1.03193433981611,0.925972636848558,1.88368457004691,0.820165366326151,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,0,3.79603192297362,2.43983360552218,2.80813886136683,1.04544148007234,1.52853794622324,0.944050424693745,0.41326727862668,0.26175594198403,0.129614973291793,0,2.25477175473676,2.24274819065968,1.82004339502807,3.11121901350476,3.35815541042101,6.08242051766801,5.28107573905893,6.51021924219751,15.2046049417281,8.21386010808421,4.60848010012585,2.52808896502543,0.810900861160657,2.46506297195585,1.16928740680016,1.61124026100733,3.57626438606277,7.45211787023807,5.90758108698309,5.35122184725182,6.55378537232999,6.75535440416831,2.82627854145282,2.21287235772758,3.27255326108393,0,3.32978930061097,1.52513556236109,0.503653849092235,0.772758376128762,0.563047426353546,0.549454872801795,0,0,16.942555278512,19.3336599333014,11.4579102687879,9.10821866421544,17.1270629942661,13.5970901530146,15.5255175053315,14.4102785031751,16.3131267234314,16.0505696643064,4.35906859853542,11.1726964552289,7.68301225893604,5.83456120963906,2.93458427679175,1.83843508450014,4.22268782823069,3.29656091582231,5.13470735346904,4.80124702351215,3.04175159868288,4.52703219326583,4.21386783614471,4.03358460150676,4.82457939227151,3.81034953026459,4.1718357340148,4.82273051159263,4.94503080963968,3.38557516309114,2.74295401908332,3.54951612318675,5.00715998889374,3.77900683244054,4.32903149910521,3.63842813934209,7.3171189149109,6.31367307450823,5.43216455383447,5.05028044491965,4.03359061622192,3.34915240076916,3.27384834535751,5.57772628269478,3.85813221962283,3.99696924700713,3.04111090979031,4.08255002691767,1.3390183244819,0.661774257358546,0.463735671240843 | |phase1_expression=4.00372117761985,0,0,0,0,0.33575854382378,0,0,0.422366166455,0,0,0.0797721589953364,0.342401459862411,0,0,0.202475267389826,0,0,0,0,5.18764069921526,0,0,0.159992422793407,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0.7813353445238,0,0,0,0,0,0,0,1.56478268869608,0.65407546914134,0,0.58328969722285,0.139986421625363,0,0,0,0,0,0.286533439938757,1.03134418455488,13.9598357993122,11.1088105647127,17.1134478946668,1.69422266034566,0,0,0,0,0.599200221036809,0.384218305321555,13.7907184370275,9.99043943654511,11.7781978356774,3.99911378165325,3.53389665522582,16.7812394924487,14.185129710699,9.19218786610021,6.60695285996332,8.42736431362239,9.83081812839958,12.924856197559,13.0827330351446,15.6274011167028,3.90856198601933,9.56696437053856,9.32069311438542,8.2496003932627,10.5355043791336,12.8615617619457,0.227178579999552,0.529000920747499,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,5.21120653173718,0,0,0,0,0,0,0.34255163915718,0.258937883647172,8.16431764856536,3.81667718885499,3.95805121805784,3.45923245884088,4.06951129492081,5.76184664964954,4.52399728786832,3.21353458054686,0.578397427679647,0,0.647067399789637,1.32504911076236,0.484875253135222,0,14.3462590535658,17.8029700791437,0,0.11981512450592,0.599902730993408,0,14.5296920222678,20.5875271268382,23.3717094929928,17.7300806596122,12.5300574091862,8.72709787150152,12.3303359931496,1.32391173005411,0.373220911830279,1.26361379216837,4.41927897361595,5.85541993332167,6.43725892413724,6.84236093260327,6.93242162044289,9.32100038373192,8.96796041993949,8.80796210861451,8.79591460512653,5.38919982332106,7.56424320671277,6.15828934573821,2.6303487891309,4.44875598760957,1.39300866608867,1.02891068203972,4.37875387000685,0,0.257347907114715,0,1.44988040774851,2.81431271977315,2.34080679899319,0.946978942340841,1.37734962223183,1.23413690309903,0,0,0.233530684734339,0.16455984991348,0,0,0,0.219550115291051,0,15.9820360908737,14.7153595702377,0,0,2.98603550749328,5.10920678092965,2.06187938115349,2.42020229548011,1.77902435075896,1.52180500890047,0,1.64698954724011,0.251335208800269,0.795825888164603,0.19496408711912,0,0.432276099749388,0.199141273254367,2.0863469104839,3.65595240351132,0,2.8511185898344,3.10323979468201,3.36651935473529,2.40298841072178,1.91893192373483,1.41298855057237,1.60416313098341,0,2.16898637430922,3.14494392181125,3.37293168577281,1.82574109249653,2.17059443777175,2.03700681425136,1.72617682470486,0.486405680325106,0.549122826376163,1.43768206527355,1.48856379067401,0.624075346229121,0.252578877947112,0,0,0.554259570499814,1.89491411770485,1.14075483509418,2.54617628662782,0.938760993154008,0.167506257441816,0.714130922658041,0.585400943573396,0.315270288212382,0.44292937929755,0.637819074629948,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,6.74312477948726,8.90808818100744,0,0,2.52406575533005,2.73307121007647,4.73931475012158,2.62865677747807,2.22798674082394,1.98153571552183,3.23848561339915,4.9683495844923,5.13874111330481,21.2072068838393,4.5420827266646,1.42452482933804,3.4206261464251,1.15479086080775,0,1.21390318077491,1.81394134178851,1.13163047853539,0.590603785761546,4.91896236710284,1.80899805217755,3.27180356529755,1.78248689192361,0.948110273807448,0,0,21.1072555567349,6.48219938512717,2.19909762430683,6.64444808597936,7.44828981297549,7.84822797449111,8.88564711251453,5.17590413494819,0.469343416127421,4.02480934641258,0,0,1.77610869365496,1.20625849856312,0.477489376012546,0,0.582961673259701,7.04616147639937,0,1.03193433981611,0.925972636848558,1.88368457004691,0.820165366326151,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,0,3.79603192297362,2.43983360552218,2.80813886136683,1.04544148007234,1.52853794622324,0.944050424693745,0.41326727862668,0.26175594198403,0.129614973291793,0,2.25477175473676,2.24274819065968,1.82004339502807,3.11121901350476,3.35815541042101,6.08242051766801,5.28107573905893,6.51021924219751,15.2046049417281,8.21386010808421,4.60848010012585,2.52808896502543,0.810900861160657,2.46506297195585,1.16928740680016,1.61124026100733,3.57626438606277,7.45211787023807,5.90758108698309,5.35122184725182,6.55378537232999,6.75535440416831,2.82627854145282,2.21287235772758,3.27255326108393,0,3.32978930061097,1.52513556236109,0.503653849092235,0.772758376128762,0.563047426353546,0.549454872801795,0,0,16.942555278512,19.3336599333014,11.4579102687879,9.10821866421544,17.1270629942661,13.5970901530146,15.5255175053315,14.4102785031751,16.3131267234314,16.0505696643064,4.35906859853542,11.1726964552289,7.68301225893604,5.83456120963906,2.93458427679175,1.83843508450014,4.22268782823069,3.29656091582231,5.13470735346904,4.80124702351215,3.04175159868288,4.52703219326583,4.21386783614471,4.03358460150676,4.82457939227151,3.81034953026459,4.1718357340148,4.82273051159263,4.94503080963968,3.38557516309114,2.74295401908332,3.54951612318675,5.00715998889374,3.77900683244054,4.32903149910521,3.63842813934209,7.3171189149109,6.31367307450823,5.43216455383447,5.05028044491965,4.03359061622192,3.34915240076916,3.27384834535751,5.57772628269478,3.85813221962283,3.99696924700713,3.04111090979031,4.08255002691767,1.3390183244819,0.661774257358546,0.463735671240843 | ||
|short_description=p2@Syt14 | |short_description=p2@Syt14 | ||
}} | }} |
Latest revision as of 00:34, 27 September 2015
Short description: | p2@Syt14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Syt14_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -39bp_to_ENSMUST00000164191_5end |
EntrezGene: | Syt14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.84e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.84e-12 | 23 |
neuron | 2.44e-12 | 33 |
neuronal stem cell | 2.44e-12 | 33 |
neuroblast | 2.44e-12 | 33 |
electrically signaling cell | 2.44e-12 | 33 |
electrically responsive cell | 1.79e-08 | 39 |
electrically active cell | 1.79e-08 | 39 |
ectodermal cell | 8.85e-07 | 44 |
neurectodermal cell | 8.85e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 6.92e-28 | 64 |
neural plate | 6.92e-28 | 64 |
presumptive neural plate | 6.92e-28 | 64 |
central nervous system | 6.21e-25 | 73 |
regional part of nervous system | 1.14e-24 | 54 |
pre-chordal neural plate | 3.39e-24 | 49 |
neural tube | 1.43e-23 | 52 |
neural rod | 1.43e-23 | 52 |
future spinal cord | 1.43e-23 | 52 |
neural keel | 1.43e-23 | 52 |
ecto-epithelium | 2.17e-23 | 73 |
nervous system | 2.61e-23 | 75 |
ectoderm-derived structure | 1.13e-22 | 95 |
ectoderm | 1.13e-22 | 95 |
presumptive ectoderm | 1.13e-22 | 95 |
brain | 5.64e-22 | 47 |
future brain | 5.64e-22 | 47 |
regional part of brain | 3.54e-21 | 46 |
anterior neural tube | 3.41e-20 | 40 |
regional part of forebrain | 1.66e-19 | 39 |
forebrain | 1.66e-19 | 39 |
future forebrain | 1.66e-19 | 39 |
structure with developmental contribution from neural crest | 3.19e-19 | 92 |
gray matter | 3.57e-17 | 34 |
brain grey matter | 1.87e-15 | 29 |
regional part of telencephalon | 1.87e-15 | 29 |
telencephalon | 1.87e-15 | 29 |
cerebral cortex | 5.56e-11 | 21 |
cerebral hemisphere | 5.56e-11 | 21 |
pallium | 5.56e-11 | 21 |
regional part of cerebral cortex | 1.34e-08 | 17 |
occipital lobe | 7.47e-08 | 10 |
visual cortex | 7.47e-08 | 10 |
neocortex | 7.47e-08 | 10 |
embryo | 5.88e-07 | 320 |