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FFCP PHASE1:Mm9::chr2:79296783..79296801,-: Difference between revisions

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(Created page with "{{FFCP |id=chr2:79296783..79296801,- |short_description=p1@Neurod1 |description=CAGE_peak_1_at_Neurod1_5end |association_with_transcript=0bp_to_NM_010894,uc008kgt.1_5end ...")
 
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{{FFCP
{{FFCP
|id=chr2:79296783..79296801,-
|DHSsupport=NA
|short_description=p1@Neurod1
|DPIdataset=NA
|description=CAGE_peak_1_at_Neurod1_5end
|association_with_transcript=0bp_to_NM_010894,uc008kgt.1_5end
|EntrezGene=18012
|EntrezGene=18012
|HGNC=
|HGNC=
|MCL_coexpression_id=403
|TSSclassifier=NA
|UniProt=B1AYM8,Q60867
|UniProt=B1AYM8,Q60867
|association_with_transcript=0bp_to_NM_010894,uc008kgt.1_5end
|cluster_id=chr2:79296783..79296801,-
|description=CAGE_peak_1_at_Neurod1_5end
|id=chr2:79296783..79296801,-
|ontology_enrichment_celltype=CL:0000117!9.16e-09!23;CL:0000337!9.16e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,8.65e-09,23;CL:0000337,8.65e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!1.57e-20!49;UBERON:0000033!2.49e-18!63;UBERON:0002346!5.91e-17!71;UBERON:0003075!5.91e-17!71;UBERON:0007284!5.91e-17!71;UBERON:0001049!3.99e-15!52;UBERON:0005068!3.99e-15!52;UBERON:0006241!3.99e-15!52;UBERON:0007135!3.99e-15!52;UBERON:0000955!5.00e-14!50;UBERON:0006238!5.00e-14!50;UBERON:0002780!8.28e-14!39;UBERON:0001890!8.28e-14!39;UBERON:0006240!8.28e-14!39;UBERON:0003080!9.01e-14!40;UBERON:0002616!1.54e-13!49;UBERON:0001017!1.82e-12!73;UBERON:0005743!1.82e-12!73;UBERON:0000073!2.18e-12!75;UBERON:0001016!2.18e-12!75;UBERON:0004121!4.03e-11!102;UBERON:0000924!4.03e-11!102;UBERON:0006601!4.03e-11!102;UBERON:0002020!8.89e-11!34;UBERON:0000160!6.17e-10!43;UBERON:0002791!7.42e-10!29;UBERON:0003528!7.42e-10!29;UBERON:0001893!7.42e-10!29;UBERON:0000970!2.38e-08!9;UBERON:0000019!2.38e-08!9;UBERON:0000047!2.38e-08!9;UBERON:0004088!2.38e-08!9;UBERON:0002104!2.38e-08!9;UBERON:0001456!2.38e-08!9;UBERON:0003072!2.38e-08!9;UBERON:0003071!2.38e-08!9;UBERON:0004128!2.38e-08!9;UBERON:0007811!4.40e-08!86;UBERON:0005409!8.64e-08!59;UBERON:0002108!2.11e-07!16;UBERON:0000956!2.64e-07!21;UBERON:0001869!2.64e-07!21;UBERON:0000203!2.64e-07!21;UBERON:0001264!7.45e-07!12;UBERON:0003922!7.45e-07!12;UBERON:0002114!7.45e-07!12;UBERON:0003923!7.45e-07!12;UBERON:0003924!7.45e-07!12;UBERON:0003921!7.45e-07!12;UBERON:0001045!8.19e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.39e-21,64;UBERON:0003075,1.39e-21,64;UBERON:0007284,1.39e-21,64;UBERON:0003056,1.82e-21,49;UBERON:0010371,3.29e-16,73;UBERON:0001049,7.28e-16,52;UBERON:0005068,7.28e-16,52;UBERON:0006241,7.28e-16,52;UBERON:0007135,7.28e-16,52;UBERON:0000073,2.23e-15,54;UBERON:0000955,2.94e-15,47;UBERON:0006238,2.94e-15,47;UBERON:0002616,9.98e-15,46;UBERON:0002780,2.79e-14,39;UBERON:0001890,2.79e-14,39;UBERON:0006240,2.79e-14,39;UBERON:0003080,3.02e-14,40;UBERON:0004121,6.07e-12,95;UBERON:0000924,6.07e-12,95;UBERON:0006601,6.07e-12,95;UBERON:0001017,2.11e-11,73;UBERON:0002020,4.73e-11,34;UBERON:0001016,1.25e-10,75;UBERON:0003528,4.75e-10,29;UBERON:0002791,4.75e-10,29;UBERON:0001893,4.75e-10,29;UBERON:0000970,7.06e-09,9;UBERON:0000019,7.06e-09,9;UBERON:0000047,7.06e-09,9;UBERON:0010312,7.06e-09,9;UBERON:0004088,7.06e-09,9;UBERON:0002104,7.06e-09,9;UBERON:0001456,7.06e-09,9;UBERON:0003072,7.06e-09,9;UBERON:0004128,7.06e-09,9;UBERON:0003071,7.06e-09,9;UBERON:0010314,8.14e-09,92;UBERON:0000956,6.96e-08,21;UBERON:0001869,6.96e-08,21;UBERON:0000203,6.96e-08,21;UBERON:0001264,2.88e-07,12
|phase1_expression=0.160148847104794,1.04692622291808,0.909998478779072,0,0,34.0794921981136,43.2183385101723,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4309091180696,0,0,6.07971206614945,4.81759490241057,3.44539178469012,3.4460959692726,8.40337807474967,5.13063232532209,5.04060259519861,6.65191531965914,0,0,0,1.44425809875637,2.1610503896604,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.0123300330084,33.8554226734101,20.2826049121977,0,0,0,0,0,0,0,43.6533267818691,35.6415677195663,41.2236924248709,2.85650984403804,3.53389665522582,20.7009450673272,19.073248732629,16.5459381589804,0,4.46905683298157,1.53606533256243,15.5625819521629,15.2784364816024,16.1483144872596,39.6439858581961,0.56276261003168,2.29197371665215,3.83017161115768,8.39992916714707,10.8111678578674,0.151452386666368,0.151143120213571,0,0,0,0,0,0,6.17955448579708,0,0,0,0,0,0,0,0,0,0,5.82337786567206,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,3.72783522436244,752.739429116688,670.857801923497,6.38642638021478,0,0,0,1.3481157546434,5.03250663100489,9.67538511269056,5.73620256634512,4.85859368927628,4.98691306942944,4.54275536589721,0,0,0,89.6482306076379,29.9277018814219,51.9578756019649,102.815476118854,147.992131114672,205.810409932767,458.775232340047,482.189074584365,287.419444891046,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,15.1408762966172,196.856523481571,11.5646574044329,7.40461586657924,0.426576501070468,0.696710015581316,3.99489130098489,6.05050573870028,4.89231696458715,4.94586627892654,7.59246498471219,5.59976446061637,4.27269854960458,3.78017296878187,4.48417400373976,8.08937467788799,6.48414149624083,5.97423819763102,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,1.13694847062291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,5.39173758324135,0,0,1.26203287766503,0.780877488593277,0,0.238968797952552,0.445597348164788,0,0,0.584511715822624,0,11.5675673911851,0,0,0.162886959353576,0,6.63725691699814,28.4053344301328,23.8835610002153,24.141450208755,20.9664343945349,33.817866273832,19.898978573953,25.0838273339479,19.6073558111597,6.0046984007805,4.21674434299995,8.25084345985495,5.7874732978144,10.8036656418786,6.72665155670323,36.0086218853075,39.9015525695116,20.6907828418402,18.1003922662333,10.0473433207818,0,0,0,0,0,0.0603129249281559,0,0,6.70405924248657,1.48340241608408,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0,6.30290348093231,0.972048067396211,1.04544148007234,1.52853794622324,0.809186078308924,1.81837602595739,1.83229159388821,2.59229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5540442228096,13.3494318587081,15.4681788628637,9.45192502890282,5.48066015816514,6.7985450765073,6.07520250208625,6.30449684513909,4.53142408984205,2.5888015587591,20.8612568644195,22.7444177838588,13.6586884603307,7.77941494618541,10.2710449687711,8.27295788025063,9.77885602327107,10.5077879191836,10.2694147069381,8.59170519996911,9.37873409593887,10.1858224348481,9.64507526939789,8.51534526984761,7.69635284005218,9.52587382566147,6.95305955669133,6.36600427530227,12.3625770240992,9.56792980873583,7.54312355247914,9.40621772644489,10.9680647375768,10.0289027476307,7.24642229198046,7.36147088657586,10.0610385080025,8.94437018888666,7.4692262615224,10.661703161497,8.77899134118889,8.17587203717177,8.59385190656348,9.14127362997199,5.78719832943424,19.2354145012218,7.25187986180766,7.52048689169044,0.382576664137687,0,0
|phase1_expression=0.160148847104794,1.04692622291808,0.909998478779072,0,0,34.0794921981136,43.2183385101723,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4309091180696,0,0,6.07971206614945,4.81759490241057,3.44539178469012,3.4460959692726,8.40337807474967,5.13063232532209,5.04060259519861,6.65191531965914,0,0,0,1.44425809875637,2.1610503896604,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.0123300330084,33.8554226734101,20.2826049121977,0,0,0,0,0,0,0,43.6533267818691,35.6415677195663,41.2236924248709,2.85650984403804,3.53389665522582,20.7009450673272,19.073248732629,16.5459381589804,0,4.46905683298157,1.53606533256243,15.5625819521629,15.2784364816024,16.1483144872596,39.6439858581961,0.56276261003168,2.29197371665215,3.83017161115768,8.39992916714707,10.8111678578674,0.151452386666368,0.151143120213571,0,0,0,0,0,0,6.17955448579708,0,0,0,0,0,0,0,0,0,0,5.82337786567206,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,3.72783522436244,752.739429116688,670.857801923497,6.38642638021478,0,0,0,1.3481157546434,5.03250663100489,9.67538511269056,5.73620256634512,4.85859368927628,4.98691306942944,4.54275536589721,0,0,0,89.6482306076379,29.9277018814219,51.9578756019649,102.815476118854,147.992131114672,205.810409932767,458.775232340047,482.189074584365,287.419444891046,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,15.1408762966172,196.856523481571,11.5646574044329,7.40461586657924,0.426576501070468,0.696710015581316,3.99489130098489,6.05050573870028,4.89231696458715,4.94586627892654,7.59246498471219,5.59976446061637,4.27269854960458,3.78017296878187,4.48417400373976,8.08937467788799,6.48414149624083,5.97423819763102,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,1.13694847062291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,5.39173758324135,0,0,1.26203287766503,0.780877488593277,0,0.238968797952552,0.445597348164788,0,0,0.584511715822624,0,11.5675673911851,0,0,0.162886959353576,0,6.63725691699814,28.4053344301328,23.8835610002153,24.141450208755,20.9664343945349,33.817866273832,19.898978573953,25.0838273339479,19.6073558111597,6.0046984007805,4.21674434299995,8.25084345985495,5.7874732978144,10.8036656418786,6.72665155670323,36.0086218853075,39.9015525695116,20.6907828418402,18.1003922662333,10.0473433207818,0,0,0,0,0,0.0603129249281559,0,0,6.70405924248657,1.48340241608408,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0,6.30290348093231,0.972048067396211,1.04544148007234,1.52853794622324,0.809186078308924,1.81837602595739,1.83229159388821,2.59229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5540442228096,13.3494318587081,15.4681788628637,9.45192502890282,5.48066015816514,6.7985450765073,6.07520250208625,6.30449684513909,4.53142408984205,2.5888015587591,20.8612568644195,22.7444177838588,13.6586884603307,7.77941494618541,10.2710449687711,8.27295788025063,9.77885602327107,10.5077879191836,10.2694147069381,8.59170519996911,9.37873409593887,10.1858224348481,9.64507526939789,8.51534526984761,7.69635284005218,9.52587382566147,6.95305955669133,6.36600427530227,12.3625770240992,9.56792980873583,7.54312355247914,9.40621772644489,10.9680647375768,10.0289027476307,7.24642229198046,7.36147088657586,10.0610385080025,8.94437018888666,7.4692262615224,10.661703161497,8.77899134118889,8.17587203717177,8.59385190656348,9.14127362997199,5.78719832943424,19.2354145012218,7.25187986180766,7.52048689169044,0.382576664137687,0,0
|short_description=p1@Neurod1
}}
}}

Latest revision as of 00:57, 27 September 2015

Short description:p1@Neurod1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Neurod1_5end
Coexpression cluster:MCL_coexpression_mm9:403
Association with transcript: 0bp_to_NM_010894, uc008kgt.1_5end
EntrezGene:Neurod1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Neurod1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I734.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I843.22
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I28.40
Ileum epithelium, pool1.CNhs13199.10252-104B95.13
Ileum epithelium, pool2.CNhs13232.10253-104C15.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C336.01
Mouse Granule cells, donor2.CNhs12357.11731-123E333.86
Mouse Granule cells, donor3.CNhs12108.11636-122C720.28
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D543.65
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F535.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D941.22
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.70
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E439.64
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.81
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.82
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B2752.74
cerebellum, neonate N30.CNhs11135.1395-42I2670.86
colon, adult.CNhs10468.36-18H76.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F19.68
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G489.65
eyeball, embryo E12.CNhs11016.345-16C629.93
eyeball, embryo E14.CNhs10521.399-16E251.96
eyeball, embryo E15.CNhs10593.426-16C9102.82
eyeball, embryo E17.CNhs11023.1261-18D4147.99
eyeball, neonate N00.CNhs11207.633-15C6205.81
eyeball, neonate N01.CNhs11140.1532-43E7458.78
eyeball, neonate N02.CNhs11205.1551-44G8482.19
eyeball, neonate N16.CNhs11188.777-19A2287.42
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E815.14
hippocampus, neonate N00.CNhs11228.627-43G1196.86
intestinal mucosa, adult.CNhs10506.860-29I311.56
intestine, adult.CNhs10496.178-9A37.40
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D83.99
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E95.60
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E36.48
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F428.41
pancreas, embryo E15.CNhs11042.1556-45F223.88
pancreas, embryo E16.CNhs11003.460-26E524.14
pancreas, embryo E17.CNhs10599.1558-45G320.97
pancreas, embryo E18.CNhs10580.1535-43I733.82
pancreas, neonate N00.CNhs11105.645-26G919.90
pancreas, neonate N01.CNhs11138.1531-43D725.08
pancreas, neonate N02.CNhs11139.1539-43D819.61
pancreas, neonate N16.CNhs11136.787-43B66.00
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E610.80
pituitary gland, embryo E13.CNhs11009.370-44C76.73
pituitary gland, embryo E14.CNhs11037.398-44A536.01
pituitary gland, embryo E15.CNhs10592.427-16B939.90
pituitary gland, embryo E16.CNhs11036.449-43F620.69
pituitary gland, embryo E17.CNhs11039.1265-44F518.10
pituitary gland, neonate N00.CNhs11190.1308-22E910.05
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G86.30
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A113.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I820.86
whole body, embryo E12.CNhs10587.857-27C922.74
whole body, embryo E13.CNhs10512.372-23H213.66
whole body, embryo E14.5.CNhs10578.420-27D27.78
whole body, embryo E14.CNhs10519.395-14B110.27
whole body, embryo E16.CNhs10514.453-14F28.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.51
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.57
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.25
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.06
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.14
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I519.24
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.65e-0923
neuroblast (sensu Vertebrata)8.65e-0923

Uber anatomy
Ontology termp-valuen
neurectoderm1.39e-2164
neural plate1.39e-2164
presumptive neural plate1.39e-2164
pre-chordal neural plate1.82e-2149
ecto-epithelium3.29e-1673
neural tube7.28e-1652
neural rod7.28e-1652
future spinal cord7.28e-1652
neural keel7.28e-1652
regional part of nervous system2.23e-1554
brain2.94e-1547
future brain2.94e-1547
regional part of brain9.98e-1546
regional part of forebrain2.79e-1439
forebrain2.79e-1439
future forebrain2.79e-1439
anterior neural tube3.02e-1440
ectoderm-derived structure6.07e-1295
ectoderm6.07e-1295
presumptive ectoderm6.07e-1295
central nervous system2.11e-1173
gray matter4.73e-1134
nervous system1.25e-1075
brain grey matter4.75e-1029
regional part of telencephalon4.75e-1029
telencephalon4.75e-1029
eye7.06e-099
camera-type eye7.06e-099
simple eye7.06e-099
immature eye7.06e-099
ocular region7.06e-099
visual system7.06e-099
face7.06e-099
optic cup7.06e-099
optic vesicle7.06e-099
eye primordium7.06e-099
structure with developmental contribution from neural crest8.14e-0992
cerebral cortex6.96e-0821
cerebral hemisphere6.96e-0821
pallium6.96e-0821
pancreas2.88e-0712
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