FFCP PHASE1:Mm9::chr11:119908458..119908507,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11302 | |EntrezGene=11302 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=B1AZF9,A6BLY8,B1AZF3,Q80YE4 | |UniProt=B1AZF9,A6BLY8,B1AZF3,Q80YE4 | ||
|association_with_transcript=0bp_to_ENSMUST00000103020,ENSMUST00000150730,NM_001198785,NM_007377,uc007mrm.2,uc007mrn.2,uc007mro.2_5end | |association_with_transcript=0bp_to_ENSMUST00000103020,ENSMUST00000150730,NM_001198785,NM_007377,uc007mrm.2,uc007mrn.2,uc007mro.2_5end | ||
|cluster_id=chr11:119908458..119908507,- | |||
|description=CAGE_peak_2_at_Aatk_5end | |description=CAGE_peak_2_at_Aatk_5end | ||
|id=chr11:119908458..119908507,- | |id=chr11:119908458..119908507,- | ||
|ontology_enrichment_celltype=CL:0000117!1.81e-13!23;CL:0000337!1.81e-13!23;CL:0000540!2.65e-13!33;CL:0000047!2.65e-13!33;CL:0000031!2.65e-13!33;CL:0000404!2.65e-13!33;CL:0000221!1.09e-11!44;CL:0000133!1.09e-11!44;CL:0002319!2.78e-11!43;CL:0000393!4.45e-10!39;CL:0000211!4.45e-10!39;CL:0000055!4.97e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.01e-16,23;CL:0000337,6.01e-16,23;CL:0000540,5.28e-14,33;CL:0000047,5.28e-14,33;CL:0000031,5.28e-14,33;CL:0000404,5.28e-14,33;CL:0000221,6.39e-11,44;CL:0000133,6.39e-11,44;CL:0002319,1.83e-10,43;CL:0000393,5.82e-10,39;CL:0000211,5.82e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.64e-29!73;UBERON:0005743!2.64e-29!73;UBERON:0004121!9.42e-29!102;UBERON:0000924!9.42e-29!102;UBERON:0006601!9.42e-29!102;UBERON:0000073!1.12e-28!75;UBERON:0001016!1.12e-28!75;UBERON:0002346!5.46e-26!71;UBERON:0003075!5.46e-26!71;UBERON:0007284!5.46e-26!71;UBERON:0000033!7.83e-26!63;UBERON:0001049!4.07e-24!52;UBERON:0005068!4.07e-24!52;UBERON:0006241!4.07e-24!52;UBERON:0007135!4.07e-24!52;UBERON:0000955!2.30e-23!50;UBERON:0006238!2.30e-23!50;UBERON:0002616!1.02e-22!49;UBERON:0003056!3.33e-21!49;UBERON:0003080!2.36e-19!40;UBERON:0002020!7.38e-19!34;UBERON:0002780!1.18e-18!39;UBERON:0001890!1.18e-18!39;UBERON:0006240!1.18e-18!39;UBERON:0002791!4.31e-16!29;UBERON:0003528!4.31e-16!29;UBERON:0001893!4.31e-16!29;UBERON:0000153!4.28e-12!94;UBERON:0000956!1.51e-11!21;UBERON:0001869!1.51e-11!21;UBERON:0000203!1.51e-11!21;UBERON:0007811!3.54e-11!86;UBERON:0002619!1.58e-09!17;UBERON:0002021!7.33e-08!10;UBERON:0000411!7.33e-08!10;UBERON:0001950!7.33e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.81e-31,73;UBERON:0001016,7.73e-30,75;UBERON:0000073,3.18e-29,54;UBERON:0002346,1.11e-28,64;UBERON:0003075,1.11e-28,64;UBERON:0007284,1.11e-28,64;UBERON:0001049,2.51e-27,52;UBERON:0005068,2.51e-27,52;UBERON:0006241,2.51e-27,52;UBERON:0007135,2.51e-27,52;UBERON:0004121,2.07e-26,95;UBERON:0000924,2.07e-26,95;UBERON:0006601,2.07e-26,95;UBERON:0010371,2.16e-24,73;UBERON:0003056,7.97e-24,49;UBERON:0000955,8.74e-24,47;UBERON:0006238,8.74e-24,47;UBERON:0002616,4.97e-23,46;UBERON:0002020,7.36e-22,34;UBERON:0003080,8.27e-22,40;UBERON:0002780,5.64e-21,39;UBERON:0001890,5.64e-21,39;UBERON:0006240,5.64e-21,39;UBERON:0010314,5.80e-19,92;UBERON:0003528,1.60e-18,29;UBERON:0002791,1.60e-18,29;UBERON:0001893,1.60e-18,29;UBERON:0000956,4.73e-13,21;UBERON:0001869,4.73e-13,21;UBERON:0000203,4.73e-13,21;UBERON:0002619,1.28e-10,17;UBERON:0002021,3.55e-09,10;UBERON:0000411,3.55e-09,10;UBERON:0001950,3.55e-09,10 | |||
|phase1_expression=4.16387002472464,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,8.84450217571126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.709638518536602,0.734187008646726,0,0.65407546914134,1.09843091367236,0.58328969722285,0.279972843250725,1.43752564364972,0,0,0,0,0,0,18.613114399083,20.1016572123373,29.7900759647904,0.338844532069132,0,0,0,0,1.79760066311043,2.30530983192933,11.3021677416241,10.6654691282036,9.25429829946081,28.5650984403804,24.0746709637259,12.1265891222804,9.20116521775069,20.2228133054205,72.6764814595965,43.541382287049,44.2386815777981,24.6627358055462,17.5656275716627,19.2737947106001,37.6897048651864,25.3243174514256,43.8530971119445,23.5702868378934,21.0710087582672,21.4359362699096,0.302904773332736,0.755715601067855,0.579728977403356,1.72084775396277,0,0,0,0,2.66844398250329,0,0,0,4.92951969218382,0,0,0,0,0,0,2.62622923353838,0.258937883647172,2.22663208597237,1.21439728736295,1.52232739156071,0.691846491768175,1.05505848386836,1.29347577849275,1.0053327306374,0,0.289198713839823,0,0.808834249737046,0,0,0,36.0120380324203,49.0105293943485,0,0.479260498023681,0,0.127070227073065,44.0384479850179,40.2600530480391,22.9947464366542,46.4110934913378,44.2387741181472,31.9993588621723,38.2889380839908,1.01839363850316,0.497627882440372,0,1.89397670297827,0.260240885925407,2.5289231487682,2.16074555766419,2.56198190320716,2.99360596265843,3.71529788826064,3.84177070694888,7.50239775143145,1.29340795759705,1.51284864134255,3.34307135911503,2.6303487891309,1.94633074457919,1.0447564995665,1.02891068203972,1.39323986772945,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.329119699826961,1.47750717671186,0.56748166682099,1.90059983652932,0,0.671032093801859,38.9036404843635,13.7892180588241,0,0.528901133327089,1.49301775374664,0.696710015581316,0.77320476793256,0.80673409849337,0.667134131534611,0.380451252225118,0,1.15289268306808,1.50801125280162,1.59165177632921,1.36474860983384,4.49409704327111,1.72910439899755,1.59313018603494,0.379335801906163,0.685491075658373,0,0.610953983535943,0.193952487167626,1.40271639780637,1.01178459398812,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,1.84753190166605,1.51593129416388,0.325929952884052,0.509235257325564,0.704070744865506,0.167506257441816,0.238043640886014,0.390267295715598,1.89162172927429,1.10732344824387,1.11618338060241,2.13022309130459,1.89953480052485,2.60368305446721,0,0,0,0.275936746304732,32.431219177534,34.4602358581077,0,1.51482556322624,0.94652465824877,1.17131623288992,1.29254038639679,0.477937595905104,2.22798674082394,1.69845918473299,0.809621403349789,2.33804686329049,2.37172666767914,33.4174169078679,0.141940085208269,0.890328018336276,0.488660878060728,0.989820737835213,0,0.485561272309963,1.81394134178851,0.565815239267694,0.885905678642318,0.307435147943927,0.258428293168221,0,0.356497378384721,0.632073515871632,0,1.03135543248187,8.85142974959849,0.720244376125241,1.94038025674132,1.50035924522115,2.30542303734956,3.56737635204141,2.13913726782757,7.00269382963578,0,0.63549621259146,0.661585194164886,0.49465875882444,0.968786560175433,0.784068024066026,0.358117032009409,0.656563598980245,0.874442509889552,34.4891061739548,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0.790839983952838,1.21991680276109,1.08005340821801,1.25452977608681,0.218362563746178,0.809186078308924,2.97552440611209,0.26175594198403,2.20345454596048,0.621339313086926,0.56369293868419,0.299033092087958,0.165458490457098,0,0.387479470433193,0.337912250981556,0.234714477291508,0.39061315453185,0.419437377702843,0.483168241652012,0.288030006257865,0,0.608175645870493,0.205421914329655,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,2.31827512838629,0.187682475451182,0,0.214368379079066,0.501572104035363,28.2375921308533,27.1591889539234,34.3737308063638,60.6641733673217,44.5303637850917,50.6113911251099,49.2766425169218,43.2308355095252,39.87653199061,54.8825930456929,0.103787347584177,1.19707462020309,1.70733605754134,2.91728060481953,2.30574478890781,2.38996560985018,2.66696073361938,2.67845574410562,2.56735367673452,2.27427490587418,3.04175159868288,2.26351609663291,2.99652823903624,2.11283002936069,2.87177344778066,3.33405583898152,2.78122382267653,2.12200142510076,0.824171801606613,3.67997300335993,1.37147700954166,2.12970967391205,2.14592570952589,2.0348498328526,2.4468438907986,3.04612588410035,2.56099162021882,2.63069711437843,3.25929873230068,4.48913817326191,3.08451047122853,2.65962102414021,2.86461730218783,3.87342102964915,3.2794123866794,6.74488560432454,2.8071793013449,3.43793686477277,1.53030665655075,1.10295709559758,0.463735671240843 | |phase1_expression=4.16387002472464,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,8.84450217571126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.709638518536602,0.734187008646726,0,0.65407546914134,1.09843091367236,0.58328969722285,0.279972843250725,1.43752564364972,0,0,0,0,0,0,18.613114399083,20.1016572123373,29.7900759647904,0.338844532069132,0,0,0,0,1.79760066311043,2.30530983192933,11.3021677416241,10.6654691282036,9.25429829946081,28.5650984403804,24.0746709637259,12.1265891222804,9.20116521775069,20.2228133054205,72.6764814595965,43.541382287049,44.2386815777981,24.6627358055462,17.5656275716627,19.2737947106001,37.6897048651864,25.3243174514256,43.8530971119445,23.5702868378934,21.0710087582672,21.4359362699096,0.302904773332736,0.755715601067855,0.579728977403356,1.72084775396277,0,0,0,0,2.66844398250329,0,0,0,4.92951969218382,0,0,0,0,0,0,2.62622923353838,0.258937883647172,2.22663208597237,1.21439728736295,1.52232739156071,0.691846491768175,1.05505848386836,1.29347577849275,1.0053327306374,0,0.289198713839823,0,0.808834249737046,0,0,0,36.0120380324203,49.0105293943485,0,0.479260498023681,0,0.127070227073065,44.0384479850179,40.2600530480391,22.9947464366542,46.4110934913378,44.2387741181472,31.9993588621723,38.2889380839908,1.01839363850316,0.497627882440372,0,1.89397670297827,0.260240885925407,2.5289231487682,2.16074555766419,2.56198190320716,2.99360596265843,3.71529788826064,3.84177070694888,7.50239775143145,1.29340795759705,1.51284864134255,3.34307135911503,2.6303487891309,1.94633074457919,1.0447564995665,1.02891068203972,1.39323986772945,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.329119699826961,1.47750717671186,0.56748166682099,1.90059983652932,0,0.671032093801859,38.9036404843635,13.7892180588241,0,0.528901133327089,1.49301775374664,0.696710015581316,0.77320476793256,0.80673409849337,0.667134131534611,0.380451252225118,0,1.15289268306808,1.50801125280162,1.59165177632921,1.36474860983384,4.49409704327111,1.72910439899755,1.59313018603494,0.379335801906163,0.685491075658373,0,0.610953983535943,0.193952487167626,1.40271639780637,1.01178459398812,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,1.84753190166605,1.51593129416388,0.325929952884052,0.509235257325564,0.704070744865506,0.167506257441816,0.238043640886014,0.390267295715598,1.89162172927429,1.10732344824387,1.11618338060241,2.13022309130459,1.89953480052485,2.60368305446721,0,0,0,0.275936746304732,32.431219177534,34.4602358581077,0,1.51482556322624,0.94652465824877,1.17131623288992,1.29254038639679,0.477937595905104,2.22798674082394,1.69845918473299,0.809621403349789,2.33804686329049,2.37172666767914,33.4174169078679,0.141940085208269,0.890328018336276,0.488660878060728,0.989820737835213,0,0.485561272309963,1.81394134178851,0.565815239267694,0.885905678642318,0.307435147943927,0.258428293168221,0,0.356497378384721,0.632073515871632,0,1.03135543248187,8.85142974959849,0.720244376125241,1.94038025674132,1.50035924522115,2.30542303734956,3.56737635204141,2.13913726782757,7.00269382963578,0,0.63549621259146,0.661585194164886,0.49465875882444,0.968786560175433,0.784068024066026,0.358117032009409,0.656563598980245,0.874442509889552,34.4891061739548,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0.790839983952838,1.21991680276109,1.08005340821801,1.25452977608681,0.218362563746178,0.809186078308924,2.97552440611209,0.26175594198403,2.20345454596048,0.621339313086926,0.56369293868419,0.299033092087958,0.165458490457098,0,0.387479470433193,0.337912250981556,0.234714477291508,0.39061315453185,0.419437377702843,0.483168241652012,0.288030006257865,0,0.608175645870493,0.205421914329655,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,2.31827512838629,0.187682475451182,0,0.214368379079066,0.501572104035363,28.2375921308533,27.1591889539234,34.3737308063638,60.6641733673217,44.5303637850917,50.6113911251099,49.2766425169218,43.2308355095252,39.87653199061,54.8825930456929,0.103787347584177,1.19707462020309,1.70733605754134,2.91728060481953,2.30574478890781,2.38996560985018,2.66696073361938,2.67845574410562,2.56735367673452,2.27427490587418,3.04175159868288,2.26351609663291,2.99652823903624,2.11283002936069,2.87177344778066,3.33405583898152,2.78122382267653,2.12200142510076,0.824171801606613,3.67997300335993,1.37147700954166,2.12970967391205,2.14592570952589,2.0348498328526,2.4468438907986,3.04612588410035,2.56099162021882,2.63069711437843,3.25929873230068,4.48913817326191,3.08451047122853,2.65962102414021,2.86461730218783,3.87342102964915,3.2794123866794,6.74488560432454,2.8071793013449,3.43793686477277,1.53030665655075,1.10295709559758,0.463735671240843 | ||
|short_description=p2@Aatk | |short_description=p2@Aatk | ||
}} | }} |
Latest revision as of 02:38, 27 September 2015
Short description: | p2@Aatk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Aatk_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000103020, ENSMUST00000150730, NM_001198785, NM_007377, uc007mrm.2, uc007mrn.2, uc007mro.2_5end |
EntrezGene: | Aatk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.01e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.01e-16 | 23 |
neuron | 5.28e-14 | 33 |
neuronal stem cell | 5.28e-14 | 33 |
neuroblast | 5.28e-14 | 33 |
electrically signaling cell | 5.28e-14 | 33 |
ectodermal cell | 6.39e-11 | 44 |
neurectodermal cell | 6.39e-11 | 44 |
neural cell | 1.83e-10 | 43 |
electrically responsive cell | 5.82e-10 | 39 |
electrically active cell | 5.82e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.81e-31 | 73 |
nervous system | 7.73e-30 | 75 |
regional part of nervous system | 3.18e-29 | 54 |
neurectoderm | 1.11e-28 | 64 |
neural plate | 1.11e-28 | 64 |
presumptive neural plate | 1.11e-28 | 64 |
neural tube | 2.51e-27 | 52 |
neural rod | 2.51e-27 | 52 |
future spinal cord | 2.51e-27 | 52 |
neural keel | 2.51e-27 | 52 |
ectoderm-derived structure | 2.07e-26 | 95 |
ectoderm | 2.07e-26 | 95 |
presumptive ectoderm | 2.07e-26 | 95 |
ecto-epithelium | 2.16e-24 | 73 |
pre-chordal neural plate | 7.97e-24 | 49 |
brain | 8.74e-24 | 47 |
future brain | 8.74e-24 | 47 |
regional part of brain | 4.97e-23 | 46 |
gray matter | 7.36e-22 | 34 |
anterior neural tube | 8.27e-22 | 40 |
regional part of forebrain | 5.64e-21 | 39 |
forebrain | 5.64e-21 | 39 |
future forebrain | 5.64e-21 | 39 |
structure with developmental contribution from neural crest | 5.80e-19 | 92 |
brain grey matter | 1.60e-18 | 29 |
regional part of telencephalon | 1.60e-18 | 29 |
telencephalon | 1.60e-18 | 29 |
cerebral cortex | 4.73e-13 | 21 |
cerebral hemisphere | 4.73e-13 | 21 |
pallium | 4.73e-13 | 21 |
regional part of cerebral cortex | 1.28e-10 | 17 |
occipital lobe | 3.55e-09 | 10 |
visual cortex | 3.55e-09 | 10 |
neocortex | 3.55e-09 | 10 |