FFCP PHASE1:Mm9::chr11:119908458..119908507,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11302 | |EntrezGene=11302 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=B1AZF9,A6BLY8,B1AZF3,Q80YE4 | |UniProt=B1AZF9,A6BLY8,B1AZF3,Q80YE4 | ||
|association_with_transcript=0bp_to_ENSMUST00000103020,ENSMUST00000150730,NM_001198785,NM_007377,uc007mrm.2,uc007mrn.2,uc007mro.2_5end | |association_with_transcript=0bp_to_ENSMUST00000103020,ENSMUST00000150730,NM_001198785,NM_007377,uc007mrm.2,uc007mrn.2,uc007mro.2_5end | ||
|cluster_id=chr11:119908458..119908507,- | |||
|description=CAGE_peak_2_at_Aatk_5end | |description=CAGE_peak_2_at_Aatk_5end | ||
|id=chr11:119908458..119908507,- | |id=chr11:119908458..119908507,- | ||
|ontology_enrichment_celltype=CL:0000117!1.81e-13!23;CL:0000337!1.81e-13!23;CL:0000540!2.65e-13!33;CL:0000047!2.65e-13!33;CL:0000031!2.65e-13!33;CL:0000404!2.65e-13!33;CL:0000221!1.09e-11!44;CL:0000133!1.09e-11!44;CL:0002319!2.78e-11!43;CL:0000393!4.45e-10!39;CL:0000211!4.45e-10!39;CL:0000055!4.97e-09!50 | |ontology_enrichment_celltype=CL:0000117!1.81e-13!23;CL:0000337!1.81e-13!23;CL:0000540!2.65e-13!33;CL:0000047!2.65e-13!33;CL:0000031!2.65e-13!33;CL:0000404!2.65e-13!33;CL:0000221!1.09e-11!44;CL:0000133!1.09e-11!44;CL:0002319!2.78e-11!43;CL:0000393!4.45e-10!39;CL:0000211!4.45e-10!39;CL:0000055!4.97e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.01e-16,23;CL:0000337,6.01e-16,23;CL:0000540,5.28e-14,33;CL:0000047,5.28e-14,33;CL:0000031,5.28e-14,33;CL:0000404,5.28e-14,33;CL:0000221,6.39e-11,44;CL:0000133,6.39e-11,44;CL:0002319,1.83e-10,43;CL:0000393,5.82e-10,39;CL:0000211,5.82e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.64e-29!73;UBERON:0005743!2.64e-29!73;UBERON:0004121!9.42e-29!102;UBERON:0000924!9.42e-29!102;UBERON:0006601!9.42e-29!102;UBERON:0000073!1.12e-28!75;UBERON:0001016!1.12e-28!75;UBERON:0002346!5.46e-26!71;UBERON:0003075!5.46e-26!71;UBERON:0007284!5.46e-26!71;UBERON:0000033!7.83e-26!63;UBERON:0001049!4.07e-24!52;UBERON:0005068!4.07e-24!52;UBERON:0006241!4.07e-24!52;UBERON:0007135!4.07e-24!52;UBERON:0000955!2.30e-23!50;UBERON:0006238!2.30e-23!50;UBERON:0002616!1.02e-22!49;UBERON:0003056!3.33e-21!49;UBERON:0003080!2.36e-19!40;UBERON:0002020!7.38e-19!34;UBERON:0002780!1.18e-18!39;UBERON:0001890!1.18e-18!39;UBERON:0006240!1.18e-18!39;UBERON:0002791!4.31e-16!29;UBERON:0003528!4.31e-16!29;UBERON:0001893!4.31e-16!29;UBERON:0000153!4.28e-12!94;UBERON:0000956!1.51e-11!21;UBERON:0001869!1.51e-11!21;UBERON:0000203!1.51e-11!21;UBERON:0007811!3.54e-11!86;UBERON:0002619!1.58e-09!17;UBERON:0002021!7.33e-08!10;UBERON:0000411!7.33e-08!10;UBERON:0001950!7.33e-08!10 | |ontology_enrichment_uberon=UBERON:0001017!2.64e-29!73;UBERON:0005743!2.64e-29!73;UBERON:0004121!9.42e-29!102;UBERON:0000924!9.42e-29!102;UBERON:0006601!9.42e-29!102;UBERON:0000073!1.12e-28!75;UBERON:0001016!1.12e-28!75;UBERON:0002346!5.46e-26!71;UBERON:0003075!5.46e-26!71;UBERON:0007284!5.46e-26!71;UBERON:0000033!7.83e-26!63;UBERON:0001049!4.07e-24!52;UBERON:0005068!4.07e-24!52;UBERON:0006241!4.07e-24!52;UBERON:0007135!4.07e-24!52;UBERON:0000955!2.30e-23!50;UBERON:0006238!2.30e-23!50;UBERON:0002616!1.02e-22!49;UBERON:0003056!3.33e-21!49;UBERON:0003080!2.36e-19!40;UBERON:0002020!7.38e-19!34;UBERON:0002780!1.18e-18!39;UBERON:0001890!1.18e-18!39;UBERON:0006240!1.18e-18!39;UBERON:0002791!4.31e-16!29;UBERON:0003528!4.31e-16!29;UBERON:0001893!4.31e-16!29;UBERON:0000153!4.28e-12!94;UBERON:0000956!1.51e-11!21;UBERON:0001869!1.51e-11!21;UBERON:0000203!1.51e-11!21;UBERON:0007811!3.54e-11!86;UBERON:0002619!1.58e-09!17;UBERON:0002021!7.33e-08!10;UBERON:0000411!7.33e-08!10;UBERON:0001950!7.33e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.81e-31,73;UBERON:0001016,7.73e-30,75;UBERON:0000073,3.18e-29,54;UBERON:0002346,1.11e-28,64;UBERON:0003075,1.11e-28,64;UBERON:0007284,1.11e-28,64;UBERON:0001049,2.51e-27,52;UBERON:0005068,2.51e-27,52;UBERON:0006241,2.51e-27,52;UBERON:0007135,2.51e-27,52;UBERON:0004121,2.07e-26,95;UBERON:0000924,2.07e-26,95;UBERON:0006601,2.07e-26,95;UBERON:0010371,2.16e-24,73;UBERON:0003056,7.97e-24,49;UBERON:0000955,8.74e-24,47;UBERON:0006238,8.74e-24,47;UBERON:0002616,4.97e-23,46;UBERON:0002020,7.36e-22,34;UBERON:0003080,8.27e-22,40;UBERON:0002780,5.64e-21,39;UBERON:0001890,5.64e-21,39;UBERON:0006240,5.64e-21,39;UBERON:0010314,5.80e-19,92;UBERON:0003528,1.60e-18,29;UBERON:0002791,1.60e-18,29;UBERON:0001893,1.60e-18,29;UBERON:0000956,4.73e-13,21;UBERON:0001869,4.73e-13,21;UBERON:0000203,4.73e-13,21;UBERON:0002619,1.28e-10,17;UBERON:0002021,3.55e-09,10;UBERON:0000411,3.55e-09,10;UBERON:0001950,3.55e-09,10 | |||
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| ||
|short_description=p2@Aatk | |short_description=p2@Aatk | ||
}} | }} |
Latest revision as of 02:38, 27 September 2015
Short description: | p2@Aatk |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Aatk_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000103020, ENSMUST00000150730, NM_001198785, NM_007377, uc007mrm.2, uc007mrn.2, uc007mro.2_5end |
EntrezGene: | Aatk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.01e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.01e-16 | 23 |
neuron | 5.28e-14 | 33 |
neuronal stem cell | 5.28e-14 | 33 |
neuroblast | 5.28e-14 | 33 |
electrically signaling cell | 5.28e-14 | 33 |
ectodermal cell | 6.39e-11 | 44 |
neurectodermal cell | 6.39e-11 | 44 |
neural cell | 1.83e-10 | 43 |
electrically responsive cell | 5.82e-10 | 39 |
electrically active cell | 5.82e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.81e-31 | 73 |
nervous system | 7.73e-30 | 75 |
regional part of nervous system | 3.18e-29 | 54 |
neurectoderm | 1.11e-28 | 64 |
neural plate | 1.11e-28 | 64 |
presumptive neural plate | 1.11e-28 | 64 |
neural tube | 2.51e-27 | 52 |
neural rod | 2.51e-27 | 52 |
future spinal cord | 2.51e-27 | 52 |
neural keel | 2.51e-27 | 52 |
ectoderm-derived structure | 2.07e-26 | 95 |
ectoderm | 2.07e-26 | 95 |
presumptive ectoderm | 2.07e-26 | 95 |
ecto-epithelium | 2.16e-24 | 73 |
pre-chordal neural plate | 7.97e-24 | 49 |
brain | 8.74e-24 | 47 |
future brain | 8.74e-24 | 47 |
regional part of brain | 4.97e-23 | 46 |
gray matter | 7.36e-22 | 34 |
anterior neural tube | 8.27e-22 | 40 |
regional part of forebrain | 5.64e-21 | 39 |
forebrain | 5.64e-21 | 39 |
future forebrain | 5.64e-21 | 39 |
structure with developmental contribution from neural crest | 5.80e-19 | 92 |
brain grey matter | 1.60e-18 | 29 |
regional part of telencephalon | 1.60e-18 | 29 |
telencephalon | 1.60e-18 | 29 |
cerebral cortex | 4.73e-13 | 21 |
cerebral hemisphere | 4.73e-13 | 21 |
pallium | 4.73e-13 | 21 |
regional part of cerebral cortex | 1.28e-10 | 17 |
occipital lobe | 3.55e-09 | 10 |
visual cortex | 3.55e-09 | 10 |
neocortex | 3.55e-09 | 10 |