FFCP PHASE1:Mm9::chr1:46910327..46910416,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:46910327..46910416,- to FFCP PHASE1:Mm9::chr1:46910327..46910416,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=227059 | |EntrezGene=227059 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1407 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P5F6 | |UniProt=Q6P5F6 | ||
|association_with_transcript=0bp_to_NM_172653,uc007axc.1_5end | |||
|cluster_id=chr1:46910327..46910416,- | |||
|description=CAGE_peak_1_at_Slc39a10_5end | |||
|id=chr1:46910327..46910416,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!8.26e-15!63;UBERON:0002346!2.08e-14!71;UBERON:0003075!2.08e-14!71;UBERON:0007284!2.08e-14!71;UBERON:0003056!4.59e-14!49;UBERON:0004121!4.90e-14!102;UBERON:0000924!4.90e-14!102;UBERON:0006601!4.90e-14!102;UBERON:0000153!9.52e-13!94;UBERON:0000955!3.71e-12!50;UBERON:0006238!3.71e-12!50;UBERON:0002616!1.11e-11!49;UBERON:0000073!1.65e-11!75;UBERON:0001016!1.65e-11!75;UBERON:0001049!2.51e-11!52;UBERON:0005068!2.51e-11!52;UBERON:0006241!2.51e-11!52;UBERON:0007135!2.51e-11!52;UBERON:0001017!3.15e-11!73;UBERON:0005743!3.15e-11!73;UBERON:0003080!4.69e-11!40;UBERON:0002780!1.63e-10!39;UBERON:0001890!1.63e-10!39;UBERON:0006240!1.63e-10!39;UBERON:0007811!8.63e-10!86;UBERON:0002791!6.28e-09!29;UBERON:0003528!6.28e-09!29;UBERON:0001893!6.28e-09!29;UBERON:0000468!7.16e-09!333;UBERON:0002020!8.11e-09!34;UBERON:0002021!4.27e-08!10;UBERON:0000411!4.27e-08!10;UBERON:0001950!4.27e-08!10;UBERON:0000922!6.37e-08!328;UBERON:0000956!9.58e-07!21;UBERON:0001869!9.58e-07!21;UBERON:0000203!9.58e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,4.01e-15,73;UBERON:0002346,7.89e-15,64;UBERON:0003075,7.89e-15,64;UBERON:0007284,7.89e-15,64;UBERON:0004121,4.51e-14,95;UBERON:0000924,4.51e-14,95;UBERON:0006601,4.51e-14,95;UBERON:0003056,4.58e-14,49;UBERON:0010314,1.45e-12,92;UBERON:0000073,9.28e-12,54;UBERON:0001016,1.60e-11,75;UBERON:0001049,2.41e-11,52;UBERON:0005068,2.41e-11,52;UBERON:0006241,2.41e-11,52;UBERON:0007135,2.41e-11,52;UBERON:0000955,2.57e-11,47;UBERON:0006238,2.57e-11,47;UBERON:0001017,3.06e-11,73;UBERON:0003080,4.68e-11,40;UBERON:0002616,7.54e-11,46;UBERON:0002780,1.63e-10,39;UBERON:0001890,1.63e-10,39;UBERON:0006240,1.63e-10,39;UBERON:0003528,6.27e-09,29;UBERON:0002791,6.27e-09,29;UBERON:0001893,6.27e-09,29;UBERON:0002020,8.10e-09,34;UBERON:0000922,2.40e-08,320;UBERON:0002021,4.27e-08,10;UBERON:0000411,4.27e-08,10;UBERON:0001950,4.27e-08,10;UBERON:0000956,9.57e-07,21;UBERON:0001869,9.57e-07,21;UBERON:0000203,9.57e-07,21 | |||
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| ||
|short_description=p1@Slc39a10 | |||
}} | }} |
Latest revision as of 04:35, 27 September 2015
Short description: | p1@Slc39a10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc39a10_5end |
Coexpression cluster: | MCL_coexpression_mm9:1407 |
Association with transcript: | 0bp_to_NM_172653, uc007axc.1_5end |
EntrezGene: | Slc39a10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 4.01e-15 | 73 |
neurectoderm | 7.89e-15 | 64 |
neural plate | 7.89e-15 | 64 |
presumptive neural plate | 7.89e-15 | 64 |
ectoderm-derived structure | 4.51e-14 | 95 |
ectoderm | 4.51e-14 | 95 |
presumptive ectoderm | 4.51e-14 | 95 |
pre-chordal neural plate | 4.58e-14 | 49 |
structure with developmental contribution from neural crest | 1.45e-12 | 92 |
regional part of nervous system | 9.28e-12 | 54 |
nervous system | 1.60e-11 | 75 |
neural tube | 2.41e-11 | 52 |
neural rod | 2.41e-11 | 52 |
future spinal cord | 2.41e-11 | 52 |
neural keel | 2.41e-11 | 52 |
brain | 2.57e-11 | 47 |
future brain | 2.57e-11 | 47 |
central nervous system | 3.06e-11 | 73 |
anterior neural tube | 4.68e-11 | 40 |
regional part of brain | 7.54e-11 | 46 |
regional part of forebrain | 1.63e-10 | 39 |
forebrain | 1.63e-10 | 39 |
future forebrain | 1.63e-10 | 39 |
brain grey matter | 6.27e-09 | 29 |
regional part of telencephalon | 6.27e-09 | 29 |
telencephalon | 6.27e-09 | 29 |
gray matter | 8.10e-09 | 34 |
embryo | 2.40e-08 | 320 |
occipital lobe | 4.27e-08 | 10 |
visual cortex | 4.27e-08 | 10 |
neocortex | 4.27e-08 | 10 |
cerebral cortex | 9.57e-07 | 21 |
cerebral hemisphere | 9.57e-07 | 21 |
pallium | 9.57e-07 | 21 |