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FFCP PHASE1:Mm9::chr11:21901587..21901604,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18423
|EntrezGene=18423
|HGNC=
|HGNC=
|MCL_coexpression_id=1559
|TSSclassifier=NA
|UniProt=G3UYF4
|UniProt=G3UYF4
|association_with_transcript=-11bp_to_ENSMUST00000151835_5end
|association_with_transcript=-11bp_to_ENSMUST00000151835_5end
|cluster_id=chr11:21901587..21901604,-
|description=CAGE_peak_2_at_Otx1_5end
|description=CAGE_peak_2_at_Otx1_5end
|id=chr11:21901587..21901604,-
|id=chr11:21901587..21901604,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002319,1.85e-10,43;CL:0000221,4.37e-10,44;CL:0000133,4.37e-10,44;CL:0000117,5.71e-10,23;CL:0000337,5.71e-10,23;CL:0002609,6.90e-09,6;CL:0002453,7.36e-09,8;CL:0002321,4.80e-08,70;CL:0000333,8.34e-07,10;CL:0000095,8.34e-07,10;CL:0000243,8.34e-07,10;CL:0000123,8.34e-07,10;CL:0000125,8.34e-07,10;CL:0000030,8.34e-07,10;CL:0000339,8.34e-07,10
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!2.83e-24!49;UBERON:0000033!6.02e-22!63;UBERON:0002791!5.90e-18!29;UBERON:0003528!5.90e-18!29;UBERON:0001893!5.90e-18!29;UBERON:0003080!1.62e-17!40;UBERON:0000153!3.34e-17!94;UBERON:0002780!5.13e-17!39;UBERON:0001890!5.13e-17!39;UBERON:0006240!5.13e-17!39;UBERON:0000955!1.69e-15!50;UBERON:0006238!1.69e-15!50;UBERON:0000956!3.03e-15!21;UBERON:0001869!3.03e-15!21;UBERON:0000203!3.03e-15!21;UBERON:0002616!5.37e-15!49;UBERON:0007811!1.22e-14!86;UBERON:0002020!1.59e-13!34;UBERON:0004121!4.43e-13!102;UBERON:0000924!4.43e-13!102;UBERON:0006601!4.43e-13!102;UBERON:0002346!1.13e-12!71;UBERON:0003075!1.13e-12!71;UBERON:0007284!1.13e-12!71;UBERON:0001017!1.61e-12!73;UBERON:0005743!1.61e-12!73;UBERON:0002619!6.17e-12!17;UBERON:0000073!1.01e-11!75;UBERON:0001016!1.01e-11!75;UBERON:0001049!2.47e-11!52;UBERON:0005068!2.47e-11!52;UBERON:0006241!2.47e-11!52;UBERON:0007135!2.47e-11!52;UBERON:0000020!4.73e-08!12;UBERON:0001032!4.73e-08!12;UBERON:0004456!4.73e-08!12;UBERON:0000970!8.13e-08!9;UBERON:0000019!8.13e-08!9;UBERON:0000047!8.13e-08!9;UBERON:0004088!8.13e-08!9;UBERON:0002104!8.13e-08!9;UBERON:0001456!8.13e-08!9;UBERON:0003072!8.13e-08!9;UBERON:0003071!8.13e-08!9;UBERON:0004128!8.13e-08!9;UBERON:0002021!1.38e-07!10;UBERON:0000411!1.38e-07!10;UBERON:0001950!1.38e-07!10;UBERON:0001444!3.05e-07!11
|ontology_enrichment_uberon=UBERON:0003056!2.83e-24!49;UBERON:0000033!6.02e-22!63;UBERON:0002791!5.90e-18!29;UBERON:0003528!5.90e-18!29;UBERON:0001893!5.90e-18!29;UBERON:0003080!1.62e-17!40;UBERON:0000153!3.34e-17!94;UBERON:0002780!5.13e-17!39;UBERON:0001890!5.13e-17!39;UBERON:0006240!5.13e-17!39;UBERON:0000955!1.69e-15!50;UBERON:0006238!1.69e-15!50;UBERON:0000956!3.03e-15!21;UBERON:0001869!3.03e-15!21;UBERON:0000203!3.03e-15!21;UBERON:0002616!5.37e-15!49;UBERON:0007811!1.22e-14!86;UBERON:0002020!1.59e-13!34;UBERON:0004121!4.43e-13!102;UBERON:0000924!4.43e-13!102;UBERON:0006601!4.43e-13!102;UBERON:0002346!1.13e-12!71;UBERON:0003075!1.13e-12!71;UBERON:0007284!1.13e-12!71;UBERON:0001017!1.61e-12!73;UBERON:0005743!1.61e-12!73;UBERON:0002619!6.17e-12!17;UBERON:0000073!1.01e-11!75;UBERON:0001016!1.01e-11!75;UBERON:0001049!2.47e-11!52;UBERON:0005068!2.47e-11!52;UBERON:0006241!2.47e-11!52;UBERON:0007135!2.47e-11!52;UBERON:0000020!4.73e-08!12;UBERON:0001032!4.73e-08!12;UBERON:0004456!4.73e-08!12;UBERON:0000970!8.13e-08!9;UBERON:0000019!8.13e-08!9;UBERON:0000047!8.13e-08!9;UBERON:0004088!8.13e-08!9;UBERON:0002104!8.13e-08!9;UBERON:0001456!8.13e-08!9;UBERON:0003072!8.13e-08!9;UBERON:0003071!8.13e-08!9;UBERON:0004128!8.13e-08!9;UBERON:0002021!1.38e-07!10;UBERON:0000411!1.38e-07!10;UBERON:0001950!1.38e-07!10;UBERON:0001444!3.05e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.99e-32,49;UBERON:0004121,3.93e-24,95;UBERON:0000924,3.93e-24,95;UBERON:0006601,3.93e-24,95;UBERON:0002346,1.54e-23,64;UBERON:0003075,1.54e-23,64;UBERON:0007284,1.54e-23,64;UBERON:0003528,1.77e-23,29;UBERON:0002791,1.77e-23,29;UBERON:0001893,1.77e-23,29;UBERON:0000956,2.66e-23,21;UBERON:0001869,2.66e-23,21;UBERON:0000203,2.66e-23,21;UBERON:0003080,4.01e-21,40;UBERON:0002780,2.61e-20,39;UBERON:0001890,2.61e-20,39;UBERON:0006240,2.61e-20,39;UBERON:0000955,9.07e-20,47;UBERON:0006238,9.07e-20,47;UBERON:0010371,2.78e-19,73;UBERON:0001017,4.26e-19,73;UBERON:0002616,5.85e-19,46;UBERON:0002020,5.95e-19,34;UBERON:0001016,2.68e-18,75;UBERON:0002619,1.20e-17,17;UBERON:0000073,3.37e-16,54;UBERON:0001049,8.48e-16,52;UBERON:0005068,8.48e-16,52;UBERON:0006241,8.48e-16,52;UBERON:0007135,8.48e-16,52;UBERON:0010314,4.83e-14,92;UBERON:0000970,2.21e-12,9;UBERON:0000019,2.21e-12,9;UBERON:0000047,2.21e-12,9;UBERON:0010312,2.21e-12,9;UBERON:0004088,2.21e-12,9;UBERON:0002104,2.21e-12,9;UBERON:0001456,2.21e-12,9;UBERON:0003072,2.21e-12,9;UBERON:0004128,2.21e-12,9;UBERON:0003071,2.21e-12,9;UBERON:0001444,7.08e-12,11;UBERON:0000020,1.12e-10,12;UBERON:0001032,1.12e-10,12;UBERON:0004456,1.12e-10,12;UBERON:0002021,3.47e-10,10;UBERON:0000411,3.47e-10,10;UBERON:0001950,3.47e-10,10;UBERON:0000033,1.14e-09,13;UBERON:0001954,6.56e-09,7;UBERON:0003022,6.56e-09,7;UBERON:0002421,6.56e-09,7;UBERON:0000349,6.56e-09,7;UBERON:0002600,6.56e-09,7;UBERON:0005085,6.46e-08,13
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,4.57852828398938,9.00713349211335,8.55491555926847,2.37976916763116,5.75010257459886,0,0,0,0,0,0,4.65327859977075,8.99284664762456,6.33831403506179,0.338844532069132,0.889294796111139,0,0,0,2.09720077362883,3.07374644257244,9.22837549545451,10.3954572515402,7.15104868594699,0,0,1.71487118900936,2.97120960156533,1.83843757322004,0,0.766124028511126,2.15049146558741,8.04506355154182,7.68496206260241,4.68822033501084,1.11673199600552,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0.170430322578058,0,0.35333957451034,0.14084341977668,2.56652954828636,2.54805239706646,0,7.36069539438128,7.85415582972806,4.54972000513305,0.34255163915718,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19832511523858,0.915001205637253,0.753926112677186,2.78118912307642,0.767146371990992,2.0778804455956,0.486723789203273,0,0,0,42.2988130331813,9.10843100738926,4.59804208866946,4.14142898552303,1.80845781402858,1.49680298132921,2.3060469651273,2.06143794031403,12.4177617954728,0.215567992932842,0.756424320671277,1.05570674498369,0.43839146485515,2.78047249225598,1.74126083261083,2.67516777330327,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0,0,0,0.268273401399619,0,0,0,0,0,0,0,1.26173969138476,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.325929952884052,0,0.234690248288502,0,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0.637819074629948,0.327726629431476,0.345369963731791,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06103859853227,0.905510786479282,1.07168517515796,0,0,0.493647061806363,0,0,0,0,0,0.322928853391811,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0.358053391334963,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,2.0405734525369,0.443971906748129,0.897138566094757,0.335769232728157,0,0,0,0,0,4.51801474093653,3.68260189205742,1.71868654031819,3.09335728218638,2.05524755931193,0.755393897389701,3.37511250115903,1.80128481289688,5.43770890781046,2.5888015587591,2.17953429926771,6.3843979744165,1.53660245178721,1.45864030240976,0.838452650511929,0.367687016900028,0.222246727801615,0.824140228955577,0,0.505394423527595,0.760437899670719,1.32038438970253,1.12369808963859,0.448176066834085,0.746661096422973,0.476293691283074,0.927074607558844,0.77163688185482,0.824171801606613,0.735994600671987,1.37147700954166,0.532427418478012,0.238436189947321,0.726732083161643,0.564656282491984,0.507687647350059,0.548783918618318,1.05227884575137,0.543216455383447,1.12228454331548,0.474540072496697,0.394017929502254,0.818462086339379,0.154936841185966,0.771626443924566,2.24829520144151,0.935726433781634,0.429742108096597,0.191288332068843,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,4.57852828398938,9.00713349211335,8.55491555926847,2.37976916763116,5.75010257459886,0,0,0,0,0,0,4.65327859977075,8.99284664762456,6.33831403506179,0.338844532069132,0.889294796111139,0,0,0,2.09720077362883,3.07374644257244,9.22837549545451,10.3954572515402,7.15104868594699,0,0,1.71487118900936,2.97120960156533,1.83843757322004,0,0.766124028511126,2.15049146558741,8.04506355154182,7.68496206260241,4.68822033501084,1.11673199600552,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0.170430322578058,0,0.35333957451034,0.14084341977668,2.56652954828636,2.54805239706646,0,7.36069539438128,7.85415582972806,4.54972000513305,0.34255163915718,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19832511523858,0.915001205637253,0.753926112677186,2.78118912307642,0.767146371990992,2.0778804455956,0.486723789203273,0,0,0,42.2988130331813,9.10843100738926,4.59804208866946,4.14142898552303,1.80845781402858,1.49680298132921,2.3060469651273,2.06143794031403,12.4177617954728,0.215567992932842,0.756424320671277,1.05570674498369,0.43839146485515,2.78047249225598,1.74126083261083,2.67516777330327,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0,0,0,0.268273401399619,0,0,0,0,0,0,0,1.26173969138476,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.325929952884052,0,0.234690248288502,0,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0.637819074629948,0.327726629431476,0.345369963731791,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06103859853227,0.905510786479282,1.07168517515796,0,0,0.493647061806363,0,0,0,0,0,0.322928853391811,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0.358053391334963,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,2.0405734525369,0.443971906748129,0.897138566094757,0.335769232728157,0,0,0,0,0,4.51801474093653,3.68260189205742,1.71868654031819,3.09335728218638,2.05524755931193,0.755393897389701,3.37511250115903,1.80128481289688,5.43770890781046,2.5888015587591,2.17953429926771,6.3843979744165,1.53660245178721,1.45864030240976,0.838452650511929,0.367687016900028,0.222246727801615,0.824140228955577,0,0.505394423527595,0.760437899670719,1.32038438970253,1.12369808963859,0.448176066834085,0.746661096422973,0.476293691283074,0.927074607558844,0.77163688185482,0.824171801606613,0.735994600671987,1.37147700954166,0.532427418478012,0.238436189947321,0.726732083161643,0.564656282491984,0.507687647350059,0.548783918618318,1.05227884575137,0.543216455383447,1.12228454331548,0.474540072496697,0.394017929502254,0.818462086339379,0.154936841185966,0.771626443924566,2.24829520144151,0.935726433781634,0.429742108096597,0.191288332068843,0,0
|short_description=p2@Otx1
|short_description=p2@Otx1
}}
}}

Latest revision as of 05:13, 27 September 2015

Short description:p2@Otx1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Otx1_5end
Coexpression cluster:MCL_coexpression_mm9:1559
Association with transcript: -11bp_to_ENSMUST00000151835_5end
EntrezGene:Otx1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Otx1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.01
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.23
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.40
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.05
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.36
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G442.30
eyeball, embryo E12.CNhs11016.345-16C69.11
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C94.14
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A212.42
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate5.99e-3249
ectoderm-derived structure3.93e-2495
ectoderm3.93e-2495
presumptive ectoderm3.93e-2495
neurectoderm1.54e-2364
neural plate1.54e-2364
presumptive neural plate1.54e-2364
brain grey matter1.77e-2329
regional part of telencephalon1.77e-2329
telencephalon1.77e-2329
cerebral cortex2.66e-2321
cerebral hemisphere2.66e-2321
pallium2.66e-2321
anterior neural tube4.01e-2140
regional part of forebrain2.61e-2039
forebrain2.61e-2039
future forebrain2.61e-2039
brain9.07e-2047
future brain9.07e-2047
ecto-epithelium2.78e-1973
central nervous system4.26e-1973
regional part of brain5.85e-1946
gray matter5.95e-1934
nervous system2.68e-1875
regional part of cerebral cortex1.20e-1717
regional part of nervous system3.37e-1654
neural tube8.48e-1652
neural rod8.48e-1652
future spinal cord8.48e-1652
neural keel8.48e-1652
structure with developmental contribution from neural crest4.83e-1492
eye2.21e-129
camera-type eye2.21e-129
simple eye2.21e-129
immature eye2.21e-129
ocular region2.21e-129
visual system2.21e-129
face2.21e-129
optic cup2.21e-129
optic vesicle2.21e-129
eye primordium2.21e-129
subdivision of head7.08e-1211
sense organ1.12e-1012
sensory system1.12e-1012
entire sense organ system1.12e-1012
occipital lobe3.47e-1010
visual cortex3.47e-1010
neocortex3.47e-1010
head1.14e-0913
Ammon's horn6.56e-097
lobe parts of cerebral cortex6.56e-097
hippocampal formation6.56e-097
limbic system6.56e-097
limbic lobe6.56e-097
ectodermal placode6.46e-0813
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