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FFCP PHASE1:Mm9::chr13:19040213..19040286,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=218038
|EntrezGene=218038
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q7TQF7,Q8BXH2
|UniProt=Q7TQF7,Q8BXH2
|association_with_transcript=0bp_to_ENSMUST00000003345,NM_175007,uc007pol.1,uc007pom.1,uc007pon.1_5end
|association_with_transcript=0bp_to_ENSMUST00000003345,NM_175007,uc007pol.1,uc007pom.1,uc007pon.1_5end
|cluster_id=chr13:19040213..19040286,+
|description=CAGE_peak_1_at_Amph_5end
|description=CAGE_peak_1_at_Amph_5end
|id=chr13:19040213..19040286,+
|id=chr13:19040213..19040286,+
|ontology_enrichment_celltype=CL:0000540!1.05e-15!33;CL:0000047!1.05e-15!33;CL:0000031!1.05e-15!33;CL:0000404!1.05e-15!33;CL:0000221!7.91e-14!44;CL:0000133!7.91e-14!44;CL:0002319!1.31e-13!43;CL:0000117!4.31e-12!23;CL:0000337!4.31e-12!23;CL:0000393!3.23e-10!39;CL:0000211!3.23e-10!39;CL:0000055!1.21e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.55e-16,33;CL:0000047,2.55e-16,33;CL:0000031,2.55e-16,33;CL:0000404,2.55e-16,33;CL:0000221,1.61e-14,44;CL:0000133,1.61e-14,44;CL:0002319,2.71e-14,43;CL:0000117,1.51e-12,23;CL:0000337,1.51e-12,23;CL:0000393,8.51e-11,39;CL:0000211,8.51e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.16e-33!73;UBERON:0005743!8.16e-33!73;UBERON:0000073!1.44e-32!75;UBERON:0001016!1.44e-32!75;UBERON:0004121!4.82e-30!102;UBERON:0000924!4.82e-30!102;UBERON:0006601!4.82e-30!102;UBERON:0002346!1.24e-28!71;UBERON:0003075!1.24e-28!71;UBERON:0007284!1.24e-28!71;UBERON:0000033!5.58e-26!63;UBERON:0001049!3.88e-24!52;UBERON:0005068!3.88e-24!52;UBERON:0006241!3.88e-24!52;UBERON:0007135!3.88e-24!52;UBERON:0000955!4.36e-23!50;UBERON:0006238!4.36e-23!50;UBERON:0003056!1.32e-22!49;UBERON:0002616!2.26e-22!49;UBERON:0003080!4.83e-19!40;UBERON:0002780!2.02e-18!39;UBERON:0001890!2.02e-18!39;UBERON:0006240!2.02e-18!39;UBERON:0002020!8.09e-18!34;UBERON:0002791!5.21e-15!29;UBERON:0003528!5.21e-15!29;UBERON:0001893!5.21e-15!29;UBERON:0007811!8.96e-13!86;UBERON:0000153!3.38e-12!94;UBERON:0000956!6.17e-11!21;UBERON:0001869!6.17e-11!21;UBERON:0000203!6.17e-11!21;UBERON:0002619!2.08e-09!17;UBERON:0000468!8.50e-09!333;UBERON:0002021!5.82e-08!10;UBERON:0000411!5.82e-08!10;UBERON:0001950!5.82e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.21e-34,73;UBERON:0001016,4.02e-34,75;UBERON:0002346,1.37e-30,64;UBERON:0003075,1.37e-30,64;UBERON:0007284,1.37e-30,64;UBERON:0004121,4.52e-30,95;UBERON:0000924,4.52e-30,95;UBERON:0006601,4.52e-30,95;UBERON:0000073,1.18e-26,54;UBERON:0001049,2.55e-25,52;UBERON:0005068,2.55e-25,52;UBERON:0006241,2.55e-25,52;UBERON:0007135,2.55e-25,52;UBERON:0010371,2.72e-24,73;UBERON:0003056,1.62e-23,49;UBERON:0000955,3.02e-22,47;UBERON:0006238,3.02e-22,47;UBERON:0002616,1.63e-21,46;UBERON:0010314,2.48e-20,92;UBERON:0003080,8.45e-20,40;UBERON:0002780,3.75e-19,39;UBERON:0001890,3.75e-19,39;UBERON:0006240,3.75e-19,39;UBERON:0002020,1.60e-18,34;UBERON:0003528,1.36e-15,29;UBERON:0002791,1.36e-15,29;UBERON:0001893,1.36e-15,29;UBERON:0000956,2.42e-11,21;UBERON:0001869,2.42e-11,21;UBERON:0000203,2.42e-11,21;UBERON:0002619,9.49e-10,17;UBERON:0002021,3.07e-08,10;UBERON:0000411,3.07e-08,10;UBERON:0001950,3.07e-08,10
|phase1_expression=26.424559772291,0.348975407639361,0,0,0,0.16787927191189,1.16806320297763,0.258246646883153,0.140788722151667,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0,0,42.0113853346285,0,0,0.639969691173627,0.91763712426868,0,0,0.215471232685889,0.190023419456374,0,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,7.41285531693518,3.29529274101708,3.11087838518853,8.67915814077248,8.62515386189829,0,0,0,0.257259436035947,0,0,65.3482168576501,61.8919445748278,63.3831403506179,4.40497891689872,4.4464739805557,0,0,0,4.79360176829448,4.2264013585371,26.9592992002042,30.6463480012938,26.7112700916255,131.685103810153,129.649833538597,39.4420373472152,40.7343251827505,44.122501757281,143.150645299205,176.846963247985,163.744564451156,64.8880535632554,69.3476338506265,75.0115253601734,138.753950503686,111.426996786273,131.864887831387,145.546521223992,167.001981577348,110.348471928578,3.18050011999373,7.3304413303582,0,0,0,0.539703191637817,0,0,8.14577636764161,0,0,0,17.182897212755,0,0,0,0.216491041011214,0.253359865475099,0,6.96521666286266,7.25026074212081,7.71899123137089,5.03107447621794,5.48037860961854,4.84292544237723,5.27529241934179,5.17390311397101,3.76999773989026,0,1.01219549843938,0,1.61766849947409,0,0.484875253135222,0,209.338269863256,236.046438578764,0.766371165625774,0,0,0,172.109444676141,117.120154321568,73.1308329296871,197.116779098042,215.823845986799,161.243522578219,154.12919991437,1.12023300235348,0.746441823660558,0,62.0803474865098,17.0457780281142,20.4612872945791,25.2086981727489,23.2085419467001,34.3584320714206,39.7152532883034,34.9507432607789,197.390671873869,2.58681591519411,3.02569728268511,1.23165786914764,2.19195732427575,3.61461423993277,1.74126083261083,3.49829631893504,3.78165106955137,0,0,0,5.17814431338755,3.51789089971644,2.88099298337624,0.710234206755631,0.590292695242212,0.925602677324269,0.232533944750408,0,0.700592054203017,0.658239399653922,1.14917224855367,1.94565142910054,2.19299981137998,1.97595103761946,1.74468344388483,223.117635426539,108.358556835387,0,1.85115396664481,8.74481827194459,5.34144345279009,4.38149368495117,4.23535401709019,3.33567065767305,3.61428689613862,0.949058123089023,3.29397909448022,2.76468729680296,5.37182474511107,5.26403035221624,0,2.80979464837102,1.39398891278057,10.8110703543257,14.8523066392647,19.1603150644237,16.2921062276251,15.1282939990748,14.0271639780637,2.21327879934901,1.91893192373483,1.72698600625512,1.23397163921801,0,1.33476084572875,1.76903095601883,1.12431056192427,1.21716072833102,0.72353147925725,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,1.86070473834252,0,0.252578877947112,0,0,20.3228509183265,2.84237117655727,1.79261474086228,1.86719594352707,3.28566347603903,7.70528784232352,8.09348379012447,8.19561321002755,41.6156780440344,40.306573516077,41.2987850822892,28.3483534458227,33.155516518252,21.8420078458082,0,0,0,0.551873492609465,199.082731584862,188.476392040263,0,1.51482556322624,25.871673992133,23.8167634020949,38.1299413987054,34.4115069051675,46.1193255350556,56.0491530961888,29.1463705205924,30.9791209385991,38.7382022387593,203.717714611426,2.2710413633323,2.67098405500883,3.90928702448583,3.29940245945071,1.32745138339963,2.91336763385978,1.209294227859,1.69744571780308,0.885905678642318,3.07435147943927,2.84271122485043,1.81766864738753,1.42598951353889,3.16036757935816,1.05418608574999,2.06271086496374,98.3870460628447,11.1637878299412,10.3486947026204,17.5756368725906,28.551777616406,26.3985850051064,36.5298825736709,44.4518825707315,0.469343416127421,0.21183207086382,3.74898276693435,0.98931751764888,0.645857706783622,0.844380948994182,0.477489376012546,0.820704498725306,1.45740418314925,175.412335701942,0.512612642393558,0.412773735926445,0,0.565105371014073,0.820165366326151,0.686334519619568,0,0.139951452323658,0,0.954670618015114,7.27572785236611,3.86306987541013,4.10420295122845,3.97267762427491,2.40198820120795,6.06889558731693,4.71124697634415,1.57053565190418,2.33306951925227,0,0,1.79419855252775,1.48912641411388,0.972255941720238,1.16243841129958,0.506868376472335,0.58678619322877,0.651021924219751,0.524296722128554,0.241584120826006,0,1.58005560314089,10.1362607645082,6.67621221571377,2.07873316764472,1.07416017400489,1.58945083825012,0.841368146639782,0.443068581523732,0.605798699688886,0.457240839929999,0.100826185136841,0.38983152295901,0.577271049841977,0.233753804363138,2.94749498699775,6.88156455459601,2.69141569828427,3.18980771091749,4.25017106870819,1.50145980360946,1.64836461840539,1.50057865355346,0.501572104035363,268.821877085724,245.353351058325,261.813249641804,222.206164770388,187.712610417156,200.179382808271,177.530917560965,189.134905354173,205.273511269845,200.891000959706,8.82192454465502,9.17757208822371,11.6098851912811,11.6691224192781,18.0267319860065,16.3620722520513,18.4464784075341,16.0707344646337,22.4643446714271,15.9199243411192,14.448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|phase1_expression=26.424559772291,0.348975407639361,0,0,0,0.16787927191189,1.16806320297763,0.258246646883153,0.140788722151667,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0,0,42.0113853346285,0,0,0.639969691173627,0.91763712426868,0,0,0.215471232685889,0.190023419456374,0,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,7.41285531693518,3.29529274101708,3.11087838518853,8.67915814077248,8.62515386189829,0,0,0,0.257259436035947,0,0,65.3482168576501,61.8919445748278,63.3831403506179,4.40497891689872,4.4464739805557,0,0,0,4.79360176829448,4.2264013585371,26.9592992002042,30.6463480012938,26.7112700916255,131.685103810153,129.649833538597,39.4420373472152,40.7343251827505,44.122501757281,143.150645299205,176.846963247985,163.744564451156,64.8880535632554,69.3476338506265,75.0115253601734,138.753950503686,111.426996786273,131.864887831387,145.546521223992,167.001981577348,110.348471928578,3.18050011999373,7.3304413303582,0,0,0,0.539703191637817,0,0,8.14577636764161,0,0,0,17.182897212755,0,0,0,0.216491041011214,0.253359865475099,0,6.96521666286266,7.25026074212081,7.71899123137089,5.03107447621794,5.48037860961854,4.84292544237723,5.27529241934179,5.17390311397101,3.76999773989026,0,1.01219549843938,0,1.61766849947409,0,0.484875253135222,0,209.338269863256,236.046438578764,0.766371165625774,0,0,0,172.109444676141,117.120154321568,73.1308329296871,197.116779098042,215.823845986799,161.243522578219,154.12919991437,1.12023300235348,0.746441823660558,0,62.0803474865098,17.0457780281142,20.4612872945791,25.2086981727489,23.2085419467001,34.3584320714206,39.7152532883034,34.9507432607789,197.390671873869,2.58681591519411,3.02569728268511,1.23165786914764,2.19195732427575,3.61461423993277,1.74126083261083,3.49829631893504,3.78165106955137,0,0,0,5.17814431338755,3.51789089971644,2.88099298337624,0.710234206755631,0.590292695242212,0.925602677324269,0.232533944750408,0,0.700592054203017,0.658239399653922,1.14917224855367,1.94565142910054,2.19299981137998,1.97595103761946,1.74468344388483,223.117635426539,108.358556835387,0,1.85115396664481,8.74481827194459,5.34144345279009,4.38149368495117,4.23535401709019,3.33567065767305,3.61428689613862,0.949058123089023,3.29397909448022,2.76468729680296,5.37182474511107,5.26403035221624,0,2.80979464837102,1.39398891278057,10.8110703543257,14.8523066392647,19.1603150644237,16.2921062276251,15.1282939990748,14.0271639780637,2.21327879934901,1.91893192373483,1.72698600625512,1.23397163921801,0,1.33476084572875,1.76903095601883,1.12431056192427,1.21716072833102,0.72353147925725,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,1.86070473834252,0,0.252578877947112,0,0,20.3228509183265,2.84237117655727,1.79261474086228,1.86719594352707,3.28566347603903,7.70528784232352,8.09348379012447,8.19561321002755,41.6156780440344,40.306573516077,41.2987850822892,28.3483534458227,33.155516518252,21.8420078458082,0,0,0,0.551873492609465,199.082731584862,188.476392040263,0,1.51482556322624,25.871673992133,23.8167634020949,38.1299413987054,34.4115069051675,46.1193255350556,56.0491530961888,29.1463705205924,30.9791209385991,38.7382022387593,203.717714611426,2.2710413633323,2.67098405500883,3.90928702448583,3.29940245945071,1.32745138339963,2.91336763385978,1.209294227859,1.69744571780308,0.885905678642318,3.07435147943927,2.84271122485043,1.81766864738753,1.42598951353889,3.16036757935816,1.05418608574999,2.06271086496374,98.3870460628447,11.1637878299412,10.3486947026204,17.5756368725906,28.551777616406,26.3985850051064,36.5298825736709,44.4518825707315,0.469343416127421,0.21183207086382,3.74898276693435,0.98931751764888,0.645857706783622,0.844380948994182,0.477489376012546,0.820704498725306,1.45740418314925,175.412335701942,0.512612642393558,0.412773735926445,0,0.565105371014073,0.820165366326151,0.686334519619568,0,0.139951452323658,0,0.954670618015114,7.27572785236611,3.86306987541013,4.10420295122845,3.97267762427491,2.40198820120795,6.06889558731693,4.71124697634415,1.57053565190418,2.33306951925227,0,0,1.79419855252775,1.48912641411388,0.972255941720238,1.16243841129958,0.506868376472335,0.58678619322877,0.651021924219751,0.524296722128554,0.241584120826006,0,1.58005560314089,10.1362607645082,6.67621221571377,2.07873316764472,1.07416017400489,1.58945083825012,0.841368146639782,0.443068581523732,0.605798699688886,0.457240839929999,0.100826185136841,0.38983152295901,0.577271049841977,0.233753804363138,2.94749498699775,6.88156455459601,2.69141569828427,3.18980771091749,4.25017106870819,1.50145980360946,1.64836461840539,1.50057865355346,0.501572104035363,268.821877085724,245.353351058325,261.813249641804,222.206164770388,187.712610417156,200.179382808271,177.530917560965,189.134905354173,205.273511269845,200.891000959706,8.82192454465502,9.17757208822371,11.6098851912811,11.6691224192781,18.0267319860065,16.3620722520513,18.4464784075341,16.0707344646337,22.4643446714271,15.9199243411192,14.448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|short_description=p1@Amph
|short_description=p1@Amph
}}
}}

Latest revision as of 05:17, 27 September 2015

Short description:p1@Amph
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Amph_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000003345, NM_175007, uc007pol.1, uc007pom.1, uc007pon.1_5end
EntrezGene:Amph
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Amph

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A342.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.41
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C365.35
Mouse Granule cells, donor2.CNhs12357.11731-123E361.89
Mouse Granule cells, donor3.CNhs12108.11636-122C763.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D526.96
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F530.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D926.71
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1131.69
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5129.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D239.44
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F240.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D644.12
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3143.15
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3176.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7163.74
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D464.89
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F469.35
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D875.01
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4138.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5111.43
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6131.86
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6145.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6167.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1110.35
Mouse Schwann, donor1.CNhs12507.11728-123D93.18
Mouse Schwann, donor2.CNhs12573.11746-123F97.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.97
accessory axillary lymph node, adult.CNhs10475.1063-29H97.25
adrenal gland, adult.CNhs10508.49-24D77.72
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I14.84
adrenal gland, embryo E18.CNhs11026.1262-18F55.28
adrenal gland, neonate N00.CNhs11191.1311-23C15.17
adrenal gland, neonate N25.CNhs11223.1377-27I33.77
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2209.34
cerebellum, neonate N30.CNhs11135.1395-42I2236.05
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4172.11
corpus striatum, adult.CNhs10487.19-21D8117.12
corpus striatum, neonate N00.CNhs11226.630-43F173.13
cortex, adult.CNhs10473.12-14D5197.12
cortex, neonate N30.CNhs11107.1392-42F2215.82
diencephalon, adult.CNhs10482.20-12F2161.24
diencephalon, neonate N30.CNhs11201.1388-42B2154.13
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G462.08
eyeball, embryo E12.CNhs11016.345-16C617.05
eyeball, embryo E14.CNhs10521.399-16E220.46
eyeball, embryo E15.CNhs10593.426-16C925.21
eyeball, embryo E17.CNhs11023.1261-18D423.21
eyeball, neonate N00.CNhs11207.633-15C634.36
eyeball, neonate N01.CNhs11140.1532-43E739.72
eyeball, neonate N02.CNhs11205.1551-44G834.95
eyeball, neonate N16.CNhs11188.777-19A2197.39
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E95.18
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G11.95
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E8223.12
hippocampus, neonate N00.CNhs11228.627-43G1108.36
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I58.74
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D84.38
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A55.26
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I910.81
kidney, embryo E15.CNhs10997.434-16F814.85
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I216.29
kidney, embryo E18.CNhs11001.1288-20C715.13
kidney, neonate N00.CNhs11214.646-21G714.03
kidney, neonate N10.CNhs11206.758-6D52.21
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B120.32
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A67.71
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C68.20
lung, neonate N06.CNhs11212.683-20E541.62
lung, neonate N07.CNhs11111.715-19A340.31
lung, neonate N10.CNhs11219.750-23E641.30
lung, neonate N20.CNhs11109.822-18A428.35
lung, neonate N25.CNhs11119.1359-25C733.16
lung, neonate N30.CNhs11133.1394-42H221.84
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C2199.08
medulla oblongata, neonate N30.CNhs11200.1396-42A3188.48
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E125.87
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E223.82
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E338.13
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D734.41
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D846.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D956.05
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D429.15
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.98
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D638.74
olfactory brain, adult.CNhs10489.18-22I9203.72
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G898.39
pituitary gland, embryo E12.CNhs11018.346-16E611.16
pituitary gland, embryo E13.CNhs11009.370-44C710.35
pituitary gland, embryo E14.CNhs11037.398-44A517.58
pituitary gland, embryo E15.CNhs10592.427-16B928.55
pituitary gland, embryo E16.CNhs11036.449-43F626.40
pituitary gland, embryo E17.CNhs11039.1265-44F536.53
pituitary gland, neonate N00.CNhs11190.1308-22E944.45
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F83.75
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C9175.41
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E37.28
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D44.10
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B86.07
stomach, neonate N07.CNhs11210.718-18A94.71
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I12.33
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I410.14
thymus, embryo E15.CNhs11005.430-45I26.68
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.69
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.19
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1268.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2245.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3261.81
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7222.21
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4187.71
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5200.18
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6177.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7189.13
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8205.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9200.89
whole body, embryo E11.CNhs11014.324-5I88.82
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H211.61
whole body, embryo E14.5.CNhs10578.420-27D211.67
whole body, embryo E14.CNhs10519.395-14B118.03
whole body, embryo E16.CNhs10514.453-14F216.36
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G522.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.92
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.92
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G519.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.31
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.93
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.77
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.13
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.11
whole body, embryo E17.5.CNhs10513.490-9F910.03
whole body, embryo E17.CNhs10517.475-3I532.23
whole body, embryo E18.CNhs10516.493-3B316.14
whole body, neonate N00.CNhs10525.657-19C214.83
whole body, neonate N01.CNhs10576.659-23C611.29
whole body, neonate N06.CNhs10515.692-21D18.60
whole body, neonate N10.CNhs10518.761-6B47.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.55e-1633
neuronal stem cell2.55e-1633
neuroblast2.55e-1633
electrically signaling cell2.55e-1633
ectodermal cell1.61e-1444
neurectodermal cell1.61e-1444
neural cell2.71e-1443
CNS neuron (sensu Vertebrata)1.51e-1223
neuroblast (sensu Vertebrata)1.51e-1223
electrically responsive cell8.51e-1139
electrically active cell8.51e-1139

Uber anatomy
Ontology termp-valuen
central nervous system2.21e-3473
nervous system4.02e-3475
neurectoderm1.37e-3064
neural plate1.37e-3064
presumptive neural plate1.37e-3064
ectoderm-derived structure4.52e-3095
ectoderm4.52e-3095
presumptive ectoderm4.52e-3095
regional part of nervous system1.18e-2654
neural tube2.55e-2552
neural rod2.55e-2552
future spinal cord2.55e-2552
neural keel2.55e-2552
ecto-epithelium2.72e-2473
pre-chordal neural plate1.62e-2349
brain3.02e-2247
future brain3.02e-2247
regional part of brain1.63e-2146
structure with developmental contribution from neural crest2.48e-2092
anterior neural tube8.45e-2040
regional part of forebrain3.75e-1939
forebrain3.75e-1939
future forebrain3.75e-1939
gray matter1.60e-1834
brain grey matter1.36e-1529
regional part of telencephalon1.36e-1529
telencephalon1.36e-1529
cerebral cortex2.42e-1121
cerebral hemisphere2.42e-1121
pallium2.42e-1121
regional part of cerebral cortex9.49e-1017
occipital lobe3.07e-0810
visual cortex3.07e-0810
neocortex3.07e-0810
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