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FFCP PHASE1:Mm9::chr3:105255022..105255063,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:105255022..105255063,+
|DHSsupport=NA
|short_description=p2@Kcnd3
|DPIdataset=NA
|description=CAGE_peak_2_at_Kcnd3_5end
|association_with_transcript=-184bp_to_ENSMUST00000098761,NM_001039347,uc008qux.1,uc008quy.1_5end
|EntrezGene=56543
|EntrezGene=56543
|HGNC=
|HGNC=
|MCL_coexpression_id=2356
|TSSclassifier=NA
|UniProt=Q9Z0V1,Q3UH54
|UniProt=Q9Z0V1,Q3UH54
|association_with_transcript=-184bp_to_ENSMUST00000098761,NM_001039347,uc008qux.1,uc008quy.1_5end
|cluster_id=chr3:105255022..105255063,+
|description=CAGE_peak_2_at_Kcnd3_5end
|id=chr3:105255022..105255063,+
|ontology_enrichment_celltype=CL:0000117!5.24e-13!23;CL:0000337!5.24e-13!23;CL:0002319!3.62e-11!43;CL:0000221!4.64e-11!44;CL:0000133!4.64e-11!44;CL:0000540!1.91e-10!33;CL:0000047!1.91e-10!33;CL:0000031!1.91e-10!33;CL:0000404!1.91e-10!33;CL:0000055!2.81e-07!50;CL:0000393!9.07e-07!39;CL:0000211!9.07e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,5.70e-16,23;CL:0000337,5.70e-16,23;CL:0002319,4.14e-11,43;CL:0000540,5.80e-11,33;CL:0000047,5.80e-11,33;CL:0000031,5.80e-11,33;CL:0000404,5.80e-11,33;CL:0000221,1.38e-10,44;CL:0000133,1.38e-10,44;CL:0000393,8.65e-08,39;CL:0000211,8.65e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.30e-22!73;UBERON:0005743!4.30e-22!73;UBERON:0000073!1.60e-21!75;UBERON:0001016!1.60e-21!75;UBERON:0002346!3.46e-20!71;UBERON:0003075!3.46e-20!71;UBERON:0007284!3.46e-20!71;UBERON:0000033!7.50e-20!63;UBERON:0004121!1.09e-18!102;UBERON:0000924!1.09e-18!102;UBERON:0006601!1.09e-18!102;UBERON:0001049!1.58e-18!52;UBERON:0005068!1.58e-18!52;UBERON:0006241!1.58e-18!52;UBERON:0007135!1.58e-18!52;UBERON:0000955!4.42e-18!50;UBERON:0006238!4.42e-18!50;UBERON:0002616!2.38e-17!49;UBERON:0003056!3.70e-16!49;UBERON:0002020!9.72e-15!34;UBERON:0003080!4.19e-14!40;UBERON:0002780!1.90e-13!39;UBERON:0001890!1.90e-13!39;UBERON:0006240!1.90e-13!39;UBERON:0002791!2.10e-12!29;UBERON:0003528!2.10e-12!29;UBERON:0001893!2.10e-12!29;UBERON:0000956!4.07e-08!21;UBERON:0001869!4.07e-08!21;UBERON:0000203!4.07e-08!21;UBERON:0000468!2.97e-07!333;UBERON:0007811!6.04e-07!86;UBERON:0000922!7.58e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.07e-22,64;UBERON:0003075,1.07e-22,64;UBERON:0007284,1.07e-22,64;UBERON:0001017,1.24e-22,73;UBERON:0000073,3.18e-22,54;UBERON:0001016,2.07e-21,75;UBERON:0001049,1.27e-20,52;UBERON:0005068,1.27e-20,52;UBERON:0006241,1.27e-20,52;UBERON:0007135,1.27e-20,52;UBERON:0010371,3.35e-18,73;UBERON:0004121,3.84e-18,95;UBERON:0000924,3.84e-18,95;UBERON:0006601,3.84e-18,95;UBERON:0000955,5.23e-18,47;UBERON:0006238,5.23e-18,47;UBERON:0002020,1.02e-17,34;UBERON:0002616,3.82e-17,46;UBERON:0003056,1.06e-16,49;UBERON:0003080,7.55e-15,40;UBERON:0003528,8.73e-15,29;UBERON:0002791,8.73e-15,29;UBERON:0001893,8.73e-15,29;UBERON:0010314,1.54e-14,92;UBERON:0002780,4.61e-14,39;UBERON:0001890,4.61e-14,39;UBERON:0006240,4.61e-14,39;UBERON:0000956,1.97e-09,21;UBERON:0001869,1.97e-09,21;UBERON:0000203,1.97e-09,21;UBERON:0002619,5.48e-07,17;UBERON:0002420,7.33e-07,8;UBERON:0007245,7.33e-07,8;UBERON:0010009,7.33e-07,8;UBERON:0010011,7.33e-07,8;UBERON:0000454,7.33e-07,8
|phase1_expression=2.08193501236232,0,0,0,0,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0.86152399231815,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,4.57852828398938,4.39372365468944,4.27745777963423,0.979904951377538,1.43752564364972,0,0,0,0,0,0,5.86717736492834,7.40587370980846,6.33831403506179,0,0,0,0,0,1.19840044207362,3.45796474789399,4.04389488003063,5.53524347159932,3.36519938162211,2.28520787523043,2.87129103237098,4.5321595709533,3.64212789869298,2.75765635983006,4.40463523997555,4.34136949489638,4.91540906419979,5.14356522147756,4.20843160571084,3.12548022334056,3.62937898701795,4.50210088025344,7.02871939773326,4.71405736757868,3.84403538157578,5.40558392893372,0.530083353332288,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0.258937883647172,1.03909497345377,0.520455980298408,0,0.691846491768175,0.753613202763113,2.23418543557839,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0,0,0,6.44117753425404,5.44561437714983,0,0,0,0,6.5907881338122,6.40500843946077,5.6544458450789,5.38855392596057,3.3243009452943,7.48036960414416,5.51620294430376,3.66621709861139,1.11966273549084,0.758168275301024,0.420883711772948,0.390361328888111,1.37941262660084,2.34080768746954,2.41127708537144,3.60593445502038,3.84341160854549,4.02917415606834,3.3631438196072,0,0.378212160335639,0.703804496655795,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,4.37875387000685,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,1.18372367792605,0.590292695242212,0.154267112887378,0.232533944750408,0.536546802799238,0.350296027101508,0,0.32833492815819,1.54030738137126,1.60819986167866,1.97595103761946,1.74468344388483,6.51898840548794,5.45394445610208,0.330418782983798,0,4.69234151177515,8.12828351511535,4.76809606891745,2.21851877085677,2.89091456998331,1.52180500890047,0.474529061544512,0.988193728344065,0.502670417600539,1.1937388322469,0.974820435595601,0,0.216138049874694,0.796565093017469,0.379335801906163,1.48523066392647,0,2.24016460629846,1.55161989734101,1.75339549725796,5.94423448968019,1.32849133181642,0.784993639206874,0.493588655687202,0,0.166845105716094,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.325929952884052,0.339490171550376,0,0,0,0,0.472905432318573,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,1.9266070798535,3.04750385139728,0,0,0.94652465824877,2.34263246577983,1.72338718186239,0.238968797952552,0.891194696329576,0.849229592366497,0,0.292255857911312,0,16.708708453934,1.98716119291576,0.534196811001766,0.977321756121456,6.76377504187395,1.32745138339963,1.45668381692989,0.302323556964751,0.565815239267694,1.77181135728464,1.84461088766356,0.775284879504663,0.727067458955011,1.42598951353889,1.58018378967908,1.05418608574999,0,2.04263763452273,0.720244376125241,0.388076051348264,1.28602221018955,0.532020700926821,0.891844088010353,1.48094118541909,1.8267896946876,0.469343416127421,0,0.441056796109924,0,0,0,0.119372344003136,0,0.291480836629851,2.78137953015765,0,0.82554747185289,0.370389054739423,0.753473828018764,0.410082683163076,0.457556346413045,0,0.279902904647316,0.138199973804424,0,3.47969592939249,8.13277868507395,5.29226170026826,3.76358932826044,2.40198820120795,2.56242258131159,4.54594006489348,1.57053565190418,1.29614973291793,0.621339313086926,0,2.69129782879162,1.98550188548517,2.13896307178452,2.97067593998782,2.70329800785245,3.40335992072686,6.2498104725096,7.34015410979976,1.93267296660805,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,3.09103350451505,0.750729901804728,1.46521299413812,1.2862102744744,0.501572104035363,2.25900737046827,0.920650473014354,4.58316410751517,3.26521046453006,0,1.5107877947794,4.72515750162264,2.70192721934532,1.35942722695261,1.55328093525546,0.31136204275253,0.399024873401031,1.53660245178721,1.21553358534147,1.88651846365184,1.65459157605013,2.00022055021454,1.03017528619447,2.56735367673452,1.51618327058278,0.25347929989024,0.943131706930381,1.21733959710847,1.08842759088278,1.43588672389033,1.42888107384922,0.811190281613988,0.77163688185482,0.824171801606613,2.50238164228475,1.37147700954166,0.70990322463735,0.953744759789284,0.726732083161643,1.31753132581463,1.69229215783353,1.46342378298218,0.789209134313529,1.22223702461276,2.80571135828869,1.66089025373844,1.37906275325789,0,0.619747364743864,1.35034627686799,2.49810577937946,0.701794825336225,1.07435527024149,0.191288332068843,0,0
|phase1_expression=2.08193501236232,0,0,0,0,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0.86152399231815,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,4.57852828398938,4.39372365468944,4.27745777963423,0.979904951377538,1.43752564364972,0,0,0,0,0,0,5.86717736492834,7.40587370980846,6.33831403506179,0,0,0,0,0,1.19840044207362,3.45796474789399,4.04389488003063,5.53524347159932,3.36519938162211,2.28520787523043,2.87129103237098,4.5321595709533,3.64212789869298,2.75765635983006,4.40463523997555,4.34136949489638,4.91540906419979,5.14356522147756,4.20843160571084,3.12548022334056,3.62937898701795,4.50210088025344,7.02871939773326,4.71405736757868,3.84403538157578,5.40558392893372,0.530083353332288,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0.258937883647172,1.03909497345377,0.520455980298408,0,0.691846491768175,0.753613202763113,2.23418543557839,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0,0,0,6.44117753425404,5.44561437714983,0,0,0,0,6.5907881338122,6.40500843946077,5.6544458450789,5.38855392596057,3.3243009452943,7.48036960414416,5.51620294430376,3.66621709861139,1.11966273549084,0.758168275301024,0.420883711772948,0.390361328888111,1.37941262660084,2.34080768746954,2.41127708537144,3.60593445502038,3.84341160854549,4.02917415606834,3.3631438196072,0,0.378212160335639,0.703804496655795,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,4.37875387000685,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,1.18372367792605,0.590292695242212,0.154267112887378,0.232533944750408,0.536546802799238,0.350296027101508,0,0.32833492815819,1.54030738137126,1.60819986167866,1.97595103761946,1.74468344388483,6.51898840548794,5.45394445610208,0.330418782983798,0,4.69234151177515,8.12828351511535,4.76809606891745,2.21851877085677,2.89091456998331,1.52180500890047,0.474529061544512,0.988193728344065,0.502670417600539,1.1937388322469,0.974820435595601,0,0.216138049874694,0.796565093017469,0.379335801906163,1.48523066392647,0,2.24016460629846,1.55161989734101,1.75339549725796,5.94423448968019,1.32849133181642,0.784993639206874,0.493588655687202,0,0.166845105716094,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.325929952884052,0.339490171550376,0,0,0,0,0.472905432318573,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,1.9266070798535,3.04750385139728,0,0,0.94652465824877,2.34263246577983,1.72338718186239,0.238968797952552,0.891194696329576,0.849229592366497,0,0.292255857911312,0,16.708708453934,1.98716119291576,0.534196811001766,0.977321756121456,6.76377504187395,1.32745138339963,1.45668381692989,0.302323556964751,0.565815239267694,1.77181135728464,1.84461088766356,0.775284879504663,0.727067458955011,1.42598951353889,1.58018378967908,1.05418608574999,0,2.04263763452273,0.720244376125241,0.388076051348264,1.28602221018955,0.532020700926821,0.891844088010353,1.48094118541909,1.8267896946876,0.469343416127421,0,0.441056796109924,0,0,0,0.119372344003136,0,0.291480836629851,2.78137953015765,0,0.82554747185289,0.370389054739423,0.753473828018764,0.410082683163076,0.457556346413045,0,0.279902904647316,0.138199973804424,0,3.47969592939249,8.13277868507395,5.29226170026826,3.76358932826044,2.40198820120795,2.56242258131159,4.54594006489348,1.57053565190418,1.29614973291793,0.621339313086926,0,2.69129782879162,1.98550188548517,2.13896307178452,2.97067593998782,2.70329800785245,3.40335992072686,6.2498104725096,7.34015410979976,1.93267296660805,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,3.09103350451505,0.750729901804728,1.46521299413812,1.2862102744744,0.501572104035363,2.25900737046827,0.920650473014354,4.58316410751517,3.26521046453006,0,1.5107877947794,4.72515750162264,2.70192721934532,1.35942722695261,1.55328093525546,0.31136204275253,0.399024873401031,1.53660245178721,1.21553358534147,1.88651846365184,1.65459157605013,2.00022055021454,1.03017528619447,2.56735367673452,1.51618327058278,0.25347929989024,0.943131706930381,1.21733959710847,1.08842759088278,1.43588672389033,1.42888107384922,0.811190281613988,0.77163688185482,0.824171801606613,2.50238164228475,1.37147700954166,0.70990322463735,0.953744759789284,0.726732083161643,1.31753132581463,1.69229215783353,1.46342378298218,0.789209134313529,1.22223702461276,2.80571135828869,1.66089025373844,1.37906275325789,0,0.619747364743864,1.35034627686799,2.49810577937946,0.701794825336225,1.07435527024149,0.191288332068843,0,0
|short_description=p2@Kcnd3
}}
}}

Latest revision as of 06:02, 27 September 2015

Short description:p2@Kcnd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Kcnd3_5end
Coexpression cluster:MCL_coexpression_mm9:2356
Association with transcript: -184bp_to_ENSMUST00000098761, NM_001039347, uc008qux.1, uc008quy.1_5end
EntrezGene:Kcnd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Kcnd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.59
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F15.65
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C63.61
eyeball, neonate N01.CNhs11140.1532-43E73.84
eyeball, neonate N02.CNhs11205.1551-44G84.03
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E86.52
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D58.13
intestine, embryo E15.CNhs10602.976-16D84.77
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D55.94
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I916.71
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G66.76
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.48
stomach, embryo E15.CNhs10603.1252-16G88.13
stomach, embryo E16.CNhs11022.459-17D45.29
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A94.55
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.97
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B73.40
testis, neonate N07.CNhs11222.726-26I46.25
testis, neonate N10.CNhs11204.763-44D97.34
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.70e-1623
neuroblast (sensu Vertebrata)5.70e-1623
neural cell4.14e-1143
neuron5.80e-1133
neuronal stem cell5.80e-1133
neuroblast5.80e-1133
electrically signaling cell5.80e-1133
ectodermal cell1.38e-1044
neurectodermal cell1.38e-1044
electrically responsive cell8.65e-0839
electrically active cell8.65e-0839

Uber anatomy
Ontology termp-valuen
neurectoderm1.07e-2264
neural plate1.07e-2264
presumptive neural plate1.07e-2264
central nervous system1.24e-2273
regional part of nervous system3.18e-2254
nervous system2.07e-2175
neural tube1.27e-2052
neural rod1.27e-2052
future spinal cord1.27e-2052
neural keel1.27e-2052
ecto-epithelium3.35e-1873
ectoderm-derived structure3.84e-1895
ectoderm3.84e-1895
presumptive ectoderm3.84e-1895
brain5.23e-1847
future brain5.23e-1847
gray matter1.02e-1734
regional part of brain3.82e-1746
pre-chordal neural plate1.06e-1649
anterior neural tube7.55e-1540
brain grey matter8.73e-1529
regional part of telencephalon8.73e-1529
telencephalon8.73e-1529
structure with developmental contribution from neural crest1.54e-1492
regional part of forebrain4.61e-1439
forebrain4.61e-1439
future forebrain4.61e-1439
cerebral cortex1.97e-0921
cerebral hemisphere1.97e-0921
pallium1.97e-0921
regional part of cerebral cortex5.48e-0717
basal ganglion7.33e-078
nuclear complex of neuraxis7.33e-078
aggregate regional part of brain7.33e-078
collection of basal ganglia7.33e-078
cerebral subcortex7.33e-078
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