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FFCP PHASE1:Mm9::chr3:106288927..106288975,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72121
|EntrezGene=72121
|HGNC=
|HGNC=
|MCL_coexpression_id=291
|TSSclassifier=NA
|UniProt=Q91VV4
|UniProt=Q91VV4
|association_with_transcript=0bp_to_ENSMUST00000061206,NM_028110,uc008qwb.1_5end
|association_with_transcript=0bp_to_ENSMUST00000061206,NM_028110,uc008qwb.1_5end
|cluster_id=chr3:106288927..106288975,+
|description=CAGE_peak_1_at_Dennd2d_5end
|description=CAGE_peak_1_at_Dennd2d_5end
|id=chr3:106288927..106288975,+
|id=chr3:106288927..106288975,+
|ontology_enrichment_celltype=CL:0000791!2.73e-08!9;CL:0000789!2.73e-08!9;CL:0002420!2.73e-08!9;CL:0002419!2.73e-08!9;CL:0000790!2.73e-08!9;CL:0000624!1.50e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,9.30e-11,9;CL:0000789,9.30e-11,9;CL:0002420,9.30e-11,9;CL:0002419,9.30e-11,9;CL:0000790,9.30e-11,9;CL:0000624,9.43e-10,8;CL:0000084,3.45e-08,11;CL:0000827,3.45e-08,11;CL:0000893,1.03e-07,6;CL:0002489,1.03e-07,6;CL:0000898,1.03e-07,6;CL:0000809,1.03e-07,6;CL:0000810,1.03e-07,6;CL:0000895,1.03e-07,6;CL:0000808,1.03e-07,6;CL:0000894,1.03e-07,6;CL:0000806,1.03e-07,6;CL:0000807,1.03e-07,6;CL:0000805,1.03e-07,6;CL:0002425,1.03e-07,6;CL:0002436,1.03e-07,6;CL:0002427,1.03e-07,6;CL:0002428,1.03e-07,6;CL:0002429,1.03e-07,6;CL:0002433,1.03e-07,6;CL:0002431,1.03e-07,6;CL:0002432,1.03e-07,6;CL:0000838,3.08e-07,12;CL:0002031,3.95e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.67e-15!130;UBERON:0000925!1.67e-15!130;UBERON:0006595!1.67e-15!130;UBERON:0001007!4.68e-15!128;UBERON:0001555!4.68e-15!128;UBERON:0007026!4.68e-15!128;UBERON:0004921!4.88e-14!126;UBERON:0004185!4.88e-14!126;UBERON:0005409!6.03e-12!59;UBERON:0002193!2.34e-09!48;UBERON:0004177!1.28e-08!29;UBERON:0004923!1.52e-08!24;UBERON:0002390!7.38e-08!45;UBERON:0003061!7.38e-08!45;UBERON:0000344!9.19e-08!15;UBERON:0006562!1.14e-07!24;UBERON:0001557!1.14e-07!24;UBERON:0001042!1.14e-07!24;UBERON:0008814!1.14e-07!24;UBERON:0009145!1.14e-07!24;UBERON:0003408!1.21e-07!24;UBERON:0000160!1.38e-07!43;UBERON:0002370!4.23e-07!23;UBERON:0000974!4.23e-07!23;UBERON:0004807!4.23e-07!23;UBERON:0005058!4.23e-07!23;UBERON:0003351!4.23e-07!23;UBERON:0009113!4.23e-07!23;UBERON:0003295!4.23e-07!23;UBERON:0009722!4.23e-07!23;UBERON:0005562!4.23e-07!23;UBERON:0007690!4.23e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.37e-19,47;UBERON:0004119,1.43e-18,118;UBERON:0000925,1.43e-18,118;UBERON:0006595,1.43e-18,118;UBERON:0001007,1.79e-18,116;UBERON:0001555,1.79e-18,116;UBERON:0007026,1.79e-18,116;UBERON:0004921,4.01e-17,114;UBERON:0000160,6.01e-15,31;UBERON:0002193,3.74e-10,48;UBERON:0002405,3.74e-10,48;UBERON:0000344,3.21e-09,15;UBERON:0000077,4.50e-09,35;UBERON:0004923,5.17e-09,24;UBERON:0004177,8.13e-09,29;UBERON:0005057,8.13e-09,29;UBERON:0006562,1.99e-08,24;UBERON:0001557,1.99e-08,24;UBERON:0001042,1.99e-08,24;UBERON:0008814,1.99e-08,24;UBERON:0009145,1.99e-08,24;UBERON:0003408,2.15e-08,24;UBERON:0002390,2.84e-08,45;UBERON:0003061,2.84e-08,45;UBERON:0001242,1.02e-07,13;UBERON:0001262,1.02e-07,13;UBERON:0004786,1.02e-07,13;UBERON:0002370,1.07e-07,23;UBERON:0000974,1.07e-07,23;UBERON:0004807,1.07e-07,23;UBERON:0005058,1.07e-07,23;UBERON:0003351,1.07e-07,23;UBERON:0009113,1.07e-07,23;UBERON:0003295,1.07e-07,23;UBERON:0009722,1.07e-07,23;UBERON:0005562,1.07e-07,23;UBERON:0007690,1.07e-07,23;UBERON:0007023,6.16e-07,51;UBERON:0000072,7.11e-07,27
|phase1_expression=0,4.18770489167233,0.454999239389536,4.83942738090928,3.50627010962443,24.342494427224,29.2015800744407,144.618122254565,46.46027831005,90.3489071602895,188.682200984506,174.701028199787,192.087218982813,259.638595184422,4.66353666541928,4.04950534779652,3.49780939064073,16.5617636813075,15.4939309974485,5.94145512517242,1.10556277196391,0.0992909512008853,0,10.8794847499517,12.6175104586944,1.14846392823004,10.7690499039769,11.8509177977239,20.9025761402011,19.1542898617547,24.8338171933941,0,0,0,2.3108129580102,1.16364251750945,1.42918549383658,4.18531630736908,9.37602413428561,6.80580867165938,1.76469446409304,2.73218193983378,1.94204141212461,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,108.07895915969,99.1476707470269,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.302904773332736,0,0.289864488701678,0.860423876981386,0,0,0,0,4.49422144421606,0.170430322578058,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,5.02409070763864,61.886154191674,2.07818994690755,0,0,0,0,0.117588707135705,0,0,1.59059292611903,0.884610551949874,0,0.441683036920787,0,22.3670113461747,0,0,11.4955674843866,0,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0.995255764880744,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0,0,0,0.517406741478031,0,0,0,0,0.278047249225598,7.66154766348766,5.96768195583036,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.292399974850665,0,0,0,0,17.8426142811251,3.17340679996253,0,0,1.15980715189884,1.00841762311671,3.11329261382818,5.89699440948933,5.69434873853414,5.27036655116835,4.77536896720512,8.55512829776949,7.99352757188393,7.19055526923377,13.8328351919804,8.36393347668342,0,0,1.1270773567308,0,0.387904974335251,0.140271639780637,0.0632365371242573,0.442830443938806,0.470996183524124,0.370191491765402,0,0,0.393117990226406,0,0.202860121388503,0,0,0.575392274901621,0,0.274561413188081,0,0.744281895337007,0,0,0,0,5.35784251483154,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.780534591431195,0.945810864637146,1.55025282754142,2.07291199254733,4.91589944147214,4.48980952851328,4.05017364028232,0,3.80733978673097,4.42587845717133,3.03530420935206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0.178065603667255,0.162886959353576,0.494910368917606,1.32745138339963,0,0,0,0,0.307435147943927,0.775284879504663,0,0.712994756769443,0.948110273807448,0,0,0,0,0,0,0,0,0,0,3.28540391289194,0.42366414172764,0.220528398054962,1.97863503529776,3.22928853391811,3.37752379597673,4.53614907211919,4.76008609260678,6.41257840585672,0,9.56876932467975,0.206386867963223,0.370389054739423,4.1441060541032,8.20165366326151,8.92234875505438,0,0,0,30.5494597764836,0,0.203319467126849,0.86404272657441,1.46361807210128,8.95286511359328,13.7561633312517,10.6622957885683,19.8934515907862,11.6653475962614,13.0481255748254,0,0,0,0,0,0,0,0,0,0,0,8.21628913633263,0.202725215290164,0.102710957164827,1.55904987573354,0.716106782669926,0.993406773906324,12.0195449519969,11.2244040652679,6.3608863467333,3.12447907285499,6.957006774442,10.9152826428523,10.1984552138749,8.41513695707296,18.3651610728321,0,0,0,46.1723129736935,3.56596703357246,2.74727436400898,11.1471557121114,5.517293144389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0.824140228955577,1.60459604795908,0.252697211763798,0.760437899670719,0.188626341386076,0.468207537349412,0.384150914429216,0.402048282689293,0,0.231768651889711,0.964546102318525,0.824171801606613,0.294397840268795,0,0.532427418478012,0.953744759789284,0.581385666529314,0.658765662907314,0.676916863133412,0,1.31534855718921,0.271608227691724,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0.154936841185966,1.54325288784913,1.24905288968973,1.40358965067245,2.57845264857958,0.57386499620653,0.661774257358546,0.463735671240843
|phase1_expression=0,4.18770489167233,0.454999239389536,4.83942738090928,3.50627010962443,24.342494427224,29.2015800744407,144.618122254565,46.46027831005,90.3489071602895,188.682200984506,174.701028199787,192.087218982813,259.638595184422,4.66353666541928,4.04950534779652,3.49780939064073,16.5617636813075,15.4939309974485,5.94145512517242,1.10556277196391,0.0992909512008853,0,10.8794847499517,12.6175104586944,1.14846392823004,10.7690499039769,11.8509177977239,20.9025761402011,19.1542898617547,24.8338171933941,0,0,0,2.3108129580102,1.16364251750945,1.42918549383658,4.18531630736908,9.37602413428561,6.80580867165938,1.76469446409304,2.73218193983378,1.94204141212461,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,108.07895915969,99.1476707470269,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.302904773332736,0,0.289864488701678,0.860423876981386,0,0,0,0,4.49422144421606,0.170430322578058,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,5.02409070763864,61.886154191674,2.07818994690755,0,0,0,0,0.117588707135705,0,0,1.59059292611903,0.884610551949874,0,0.441683036920787,0,22.3670113461747,0,0,11.4955674843866,0,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0.995255764880744,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0,0,0,0.517406741478031,0,0,0,0,0.278047249225598,7.66154766348766,5.96768195583036,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.292399974850665,0,0,0,0,17.8426142811251,3.17340679996253,0,0,1.15980715189884,1.00841762311671,3.11329261382818,5.89699440948933,5.69434873853414,5.27036655116835,4.77536896720512,8.55512829776949,7.99352757188393,7.19055526923377,13.8328351919804,8.36393347668342,0,0,1.1270773567308,0,0.387904974335251,0.140271639780637,0.0632365371242573,0.442830443938806,0.470996183524124,0.370191491765402,0,0,0.393117990226406,0,0.202860121388503,0,0,0.575392274901621,0,0.274561413188081,0,0.744281895337007,0,0,0,0,5.35784251483154,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.780534591431195,0.945810864637146,1.55025282754142,2.07291199254733,4.91589944147214,4.48980952851328,4.05017364028232,0,3.80733978673097,4.42587845717133,3.03530420935206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0.178065603667255,0.162886959353576,0.494910368917606,1.32745138339963,0,0,0,0,0.307435147943927,0.775284879504663,0,0.712994756769443,0.948110273807448,0,0,0,0,0,0,0,0,0,0,3.28540391289194,0.42366414172764,0.220528398054962,1.97863503529776,3.22928853391811,3.37752379597673,4.53614907211919,4.76008609260678,6.41257840585672,0,9.56876932467975,0.206386867963223,0.370389054739423,4.1441060541032,8.20165366326151,8.92234875505438,0,0,0,30.5494597764836,0,0.203319467126849,0.86404272657441,1.46361807210128,8.95286511359328,13.7561633312517,10.6622957885683,19.8934515907862,11.6653475962614,13.0481255748254,0,0,0,0,0,0,0,0,0,0,0,8.21628913633263,0.202725215290164,0.102710957164827,1.55904987573354,0.716106782669926,0.993406773906324,12.0195449519969,11.2244040652679,6.3608863467333,3.12447907285499,6.957006774442,10.9152826428523,10.1984552138749,8.41513695707296,18.3651610728321,0,0,0,46.1723129736935,3.56596703357246,2.74727436400898,11.1471557121114,5.517293144389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0.824140228955577,1.60459604795908,0.252697211763798,0.760437899670719,0.188626341386076,0.468207537349412,0.384150914429216,0.402048282689293,0,0.231768651889711,0.964546102318525,0.824171801606613,0.294397840268795,0,0.532427418478012,0.953744759789284,0.581385666529314,0.658765662907314,0.676916863133412,0,1.31534855718921,0.271608227691724,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0.154936841185966,1.54325288784913,1.24905288968973,1.40358965067245,2.57845264857958,0.57386499620653,0.661774257358546,0.463735671240843
|short_description=p1@Dennd2d
|short_description=p1@Dennd2d
}}
}}

Latest revision as of 06:20, 27 September 2015

Short description:p1@Dennd2d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dennd2d_5end
Coexpression cluster:MCL_coexpression_mm9:291
Association with transcript: 0bp_to_ENSMUST00000061206, NM_028110, uc008qwb.1_5end
EntrezGene:Dennd2d
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dennd2d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I829.20
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9144.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E746.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F290.35
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6188.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1174.70
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4192.09
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8259.64
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.56
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.49
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.62
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I110.77
GP2+ M cell, pool3.CNhs13240.11847-124I211.85
Ileum epithelium, pool1.CNhs13199.10252-104B920.90
Ileum epithelium, pool2.CNhs13232.10253-104C119.15
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C824.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9108.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A199.15
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.02
accessory axillary lymph node, adult.CNhs10475.1063-29H961.89
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H711.50
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B55.97
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I317.84
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F75.90
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E95.27
intestine, neonate N06.CNhs11102.688-20B84.78
intestine, neonate N07.CNhs11095.720-20F28.56
intestine, neonate N10.CNhs11098.755-23A57.99
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E313.83
intestine, neonate N30.CNhs11131.1384-42G18.36
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A44.92
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H24.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H33.38
skin, neonate N06.CNhs11097.693-20I54.54
skin, neonate N10.CNhs11108.762-6C44.76
small intestine, neonate N16.CNhs11114.790-21I16.41
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G29.57
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H18.20
spleen, neonate N25.CNhs11099.1354-25G38.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H630.55
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C68.95
stomach, neonate N03.CNhs11193.1340-24B813.76
stomach, neonate N07.CNhs11210.718-18A910.66
stomach, neonate N25.CNhs11104.1355-25E419.89
stomach, neonate N30.CNhs11134.1386-42I111.67
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B58.22
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F812.02
thymus, neonate N03.CNhs11137.2104-43C711.22
thymus, neonate N06.CNhs11197.681-26C46.36
thymus, neonate N07.CNhs11211.713-19D33.12
thymus, neonate N10.CNhs11194.748-24E46.96
thymus, neonate N20.CNhs11186.820-7A210.92
thymus, neonate N25.CNhs11125.1362-25G710.20
thymus, neonate N30.CNhs11132.1393-42G28.42
tongue, adult.CNhs10499.32-1B418.37
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E446.17
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D511.15
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell9.30e-119
alpha-beta T cell9.30e-119
immature T cell9.30e-119
mature T cell9.30e-119
immature alpha-beta T cell9.30e-119
CD4-positive, alpha-beta T cell9.43e-108
T cell3.45e-0811
pro-T cell3.45e-0811
thymocyte1.03e-076
double negative thymocyte1.03e-076
naive T cell1.03e-076
double-positive, alpha-beta thymocyte1.03e-076
CD4-positive, alpha-beta thymocyte1.03e-076
naive thymus-derived CD4-positive, alpha-beta T cell1.03e-076
DN4 thymocyte1.03e-076
DN1 thymic pro-T cell1.03e-076
DN2 thymocyte1.03e-076
DN3 thymocyte1.03e-076
immature single positive thymocyte1.03e-076
early T lineage precursor1.03e-076
mature CD4 single-positive thymocyte1.03e-076
resting double-positive thymocyte1.03e-076
double-positive blast1.03e-076
CD69-positive double-positive thymocyte1.03e-076
CD69-positive, CD4-positive single-positive thymocyte1.03e-076
CD4-positive, CD8-intermediate double-positive thymocyte1.03e-076
CD24-positive, CD4 single-positive thymocyte1.03e-076
lymphoid lineage restricted progenitor cell3.08e-0712
hematopoietic lineage restricted progenitor cell3.95e-0725

Uber anatomy
Ontology termp-valuen
gastrointestinal system6.37e-1947
endoderm-derived structure1.43e-18118
endoderm1.43e-18118
presumptive endoderm1.43e-18118
digestive system1.79e-18116
digestive tract1.79e-18116
primitive gut1.79e-18116
subdivision of digestive tract4.01e-17114
intestine6.01e-1531
hemolymphoid system3.74e-1048
immune system3.74e-1048
mucosa3.21e-0915
mixed endoderm/mesoderm-derived structure4.50e-0935
organ component layer5.17e-0924
hemopoietic organ8.13e-0929
immune organ8.13e-0929
pharynx1.99e-0824
upper respiratory tract1.99e-0824
chordate pharynx1.99e-0824
pharyngeal arch system1.99e-0824
pharyngeal region of foregut1.99e-0824
gland of gut2.15e-0824
hematopoietic system2.84e-0845
blood island2.84e-0845
intestinal mucosa1.02e-0713
wall of intestine1.02e-0713
gastrointestinal system mucosa1.02e-0713
thymus1.07e-0723
neck1.07e-0723
respiratory system epithelium1.07e-0723
hemolymphoid system gland1.07e-0723
pharyngeal epithelium1.07e-0723
thymic region1.07e-0723
pharyngeal gland1.07e-0723
entire pharyngeal arch endoderm1.07e-0723
thymus primordium1.07e-0723
early pharyngeal endoderm1.07e-0723
adult organism6.16e-0751
segment of respiratory tract7.11e-0727
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