Personal tools

FFCP PHASE1:Mm9::chr3:106288977..106289010,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72121
|EntrezGene=72121
|HGNC=
|HGNC=
|MCL_coexpression_id=291
|TSSclassifier=NA
|UniProt=Q91VV4
|UniProt=Q91VV4
|association_with_transcript=9bp_to_ENSMUST00000061206,NM_028110,uc008qwb.1_5end
|association_with_transcript=9bp_to_ENSMUST00000061206,NM_028110,uc008qwb.1_5end
|cluster_id=chr3:106288977..106289010,+
|description=CAGE_peak_2_at_Dennd2d_5end
|description=CAGE_peak_2_at_Dennd2d_5end
|id=chr3:106288977..106289010,+
|id=chr3:106288977..106289010,+
|ontology_enrichment_celltype=CL:0000791!6.09e-09!9;CL:0000789!6.09e-09!9;CL:0002420!6.09e-09!9;CL:0002419!6.09e-09!9;CL:0000790!6.09e-09!9;CL:0000624!3.99e-08!8;CL:0000988!6.35e-08!32;CL:0002032!6.35e-08!32;CL:0000037!6.35e-08!32;CL:0000566!6.35e-08!32;CL:0000837!6.35e-08!32;CL:0002031!7.77e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000791,3.65e-12,9;CL:0000789,3.65e-12,9;CL:0002420,3.65e-12,9;CL:0002419,3.65e-12,9;CL:0000790,3.65e-12,9;CL:0000624,5.42e-11,8;CL:0000084,2.11e-09,11;CL:0000827,2.11e-09,11;CL:0000893,1.14e-08,6;CL:0002489,1.14e-08,6;CL:0000898,1.14e-08,6;CL:0000809,1.14e-08,6;CL:0000810,1.14e-08,6;CL:0000895,1.14e-08,6;CL:0000808,1.14e-08,6;CL:0000894,1.14e-08,6;CL:0000806,1.14e-08,6;CL:0000807,1.14e-08,6;CL:0000805,1.14e-08,6;CL:0002425,1.14e-08,6;CL:0002436,1.14e-08,6;CL:0002427,1.14e-08,6;CL:0002428,1.14e-08,6;CL:0002429,1.14e-08,6;CL:0002433,1.14e-08,6;CL:0002431,1.14e-08,6;CL:0002432,1.14e-08,6;CL:0000988,1.49e-08,32;CL:0002032,1.49e-08,32;CL:0000037,1.49e-08,32;CL:0000837,1.49e-08,32;CL:0000838,2.24e-08,12;CL:0002031,3.62e-08,25;CL:0000738,1.45e-07,17;CL:0002087,1.45e-07,17;CL:0000542,1.64e-07,13;CL:0000051,1.64e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!5.15e-14!48;UBERON:0002390!2.72e-12!45;UBERON:0003061!2.72e-12!45;UBERON:0001007!2.59e-10!128;UBERON:0001555!2.59e-10!128;UBERON:0007026!2.59e-10!128;UBERON:0004119!3.27e-10!130;UBERON:0000925!3.27e-10!130;UBERON:0006595!3.27e-10!130;UBERON:0004921!1.58e-09!126;UBERON:0004185!1.58e-09!126;UBERON:0004177!4.89e-09!29;UBERON:0006562!3.73e-08!24;UBERON:0001557!3.73e-08!24;UBERON:0001042!3.73e-08!24;UBERON:0008814!3.73e-08!24;UBERON:0009145!3.73e-08!24;UBERON:0003408!3.95e-08!24;UBERON:0002370!1.67e-07!23;UBERON:0000974!1.67e-07!23;UBERON:0004807!1.67e-07!23;UBERON:0005058!1.67e-07!23;UBERON:0003351!1.67e-07!23;UBERON:0009113!1.67e-07!23;UBERON:0003295!1.67e-07!23;UBERON:0009722!1.67e-07!23;UBERON:0005562!1.67e-07!23;UBERON:0007690!1.67e-07!23;UBERON:0001004!3.66e-07!42;UBERON:0002405!3.93e-07!70
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.33e-14,48;UBERON:0002405,5.33e-14,48;UBERON:0002390,8.14e-12,45;UBERON:0003061,8.14e-12,45;UBERON:0001007,3.62e-11,116;UBERON:0001555,3.62e-11,116;UBERON:0007026,3.62e-11,116;UBERON:0004119,9.96e-11,118;UBERON:0000925,9.96e-11,118;UBERON:0006595,9.96e-11,118;UBERON:0004177,1.25e-10,29;UBERON:0005057,1.25e-10,29;UBERON:0000077,3.23e-10,35;UBERON:0004921,3.69e-10,114;UBERON:0006562,7.58e-10,24;UBERON:0001557,7.58e-10,24;UBERON:0001042,7.58e-10,24;UBERON:0008814,7.58e-10,24;UBERON:0009145,7.58e-10,24;UBERON:0003408,8.19e-10,24;UBERON:0002370,5.94e-09,23;UBERON:0000974,5.94e-09,23;UBERON:0004807,5.94e-09,23;UBERON:0005058,5.94e-09,23;UBERON:0003351,5.94e-09,23;UBERON:0009113,5.94e-09,23;UBERON:0003295,5.94e-09,23;UBERON:0009722,5.94e-09,23;UBERON:0005562,5.94e-09,23;UBERON:0007690,5.94e-09,23;UBERON:0000072,3.53e-08,27;UBERON:0001004,3.82e-07,42;UBERON:0005409,4.34e-07,47;UBERON:0007023,6.24e-07,51
|phase1_expression=0,1.04692622291808,0.909998478779072,0.60492842261366,0,4.8684988854448,6.54115393667472,75.0206509195558,24.2156602100867,43.0678728432468,84.9241122398505,77.299222066481,84.5731605860156,107.964196987462,0.999329285446988,2.42970320867791,0.699561878128147,7.88655413395594,6.44437837946972,1.69755860719212,0.765389611359628,0,0,1.91990907352088,3.21172993494038,0.57423196411502,0,1.72376986148711,3.80046838912748,2.26827116783938,4.8780712344167,0,0,0,0,0,0.204169356262369,1.67412652294763,1.5626706890476,4.18818995179039,1.76469446409304,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,0.671130424230945,36.9934692425786,44.3643814868052,0,0,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.59857431606684,30.0367945030719,1.03909497345377,0,0,0.230615497256059,0,0,0,0,1.3013942122792,1.76922110389975,0.161766849947409,0,0.484875253135222,7.45567044872489,0,0,2.55457055208591,0.479260498023681,1.19980546198682,1.65191295194984,0,0,0,0,0,0.20778804455956,0,0,0.746441823660558,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.556094498451196,2.78601733217733,2.67516777330327,0,2.1066395619397,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0.219550115291051,0.134206418760372,0,0.102904612379284,1.65209391491899,0.793351699990633,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.951128130562796,1.89811624617805,0.823494773620054,1.25667604400135,0.994782360205754,2.14460495831032,2.69645822596266,1.29682829924817,1.99141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,1.11642284300551,0,0,0.179397413521912,0,3.32555742299888,0,0,0,0,0,0.476087281772027,0.585400943573396,0.630540576424764,0.8858587585951,0.478364305972461,2.29408640602033,1.89953480052485,1.59113964439663,3.01582567878545,2.71952841909355,1.96705709207614,2.48343071674259,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,1.31909002353184,3.71368181400583,2.65376869683886,2.38744688006273,2.1338316966858,0.874442509889552,0,4.78438466233988,0.412773735926445,0,2.26042148405629,2.05041341581538,3.88922894451088,0.169978429993855,0,0.276399947608848,4.77335309007557,0,0,0.108005340821801,0.627264888043406,1.52853794622324,3.10187996685088,2.72756403893609,3.40282724579238,1.42576470620972,4.97071450469541,0,0,0,0,0,0,0,0,0,0,0,3.47612232690996,0,0.205421914329655,0.389762468933385,0,0.79472541912506,5.4087952283986,4.87375439676105,3.02899349844443,1.600342939755,2.82313318383153,4.67797827550812,4.13710919053417,4.79195298944433,7.02864189207155,0,0,0,9.65947970160952,1.12609485270709,0.549454872801795,5.78794623513478,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0,0,0,0.128050304809739,0.229741875822453,0,0,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.365855945745545,0.789209134313529,0,0,0.355905054372522,0,0,0,1.92906610981141,1.49886346762768,1.87145286756327,1.50409737833809,0.765153328275374,0.441182838239031,0.463735671240843
|phase1_expression=0,1.04692622291808,0.909998478779072,0.60492842261366,0,4.8684988854448,6.54115393667472,75.0206509195558,24.2156602100867,43.0678728432468,84.9241122398505,77.299222066481,84.5731605860156,107.964196987462,0.999329285446988,2.42970320867791,0.699561878128147,7.88655413395594,6.44437837946972,1.69755860719212,0.765389611359628,0,0,1.91990907352088,3.21172993494038,0.57423196411502,0,1.72376986148711,3.80046838912748,2.26827116783938,4.8780712344167,0,0,0,0,0,0.204169356262369,1.67412652294763,1.5626706890476,4.18818995179039,1.76469446409304,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,0.671130424230945,36.9934692425786,44.3643814868052,0,0,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.59857431606684,30.0367945030719,1.03909497345377,0,0,0.230615497256059,0,0,0,0,1.3013942122792,1.76922110389975,0.161766849947409,0,0.484875253135222,7.45567044872489,0,0,2.55457055208591,0.479260498023681,1.19980546198682,1.65191295194984,0,0,0,0,0,0.20778804455956,0,0,0.746441823660558,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.556094498451196,2.78601733217733,2.67516777330327,0,2.1066395619397,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0.219550115291051,0.134206418760372,0,0.102904612379284,1.65209391491899,0.793351699990633,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.951128130562796,1.89811624617805,0.823494773620054,1.25667604400135,0.994782360205754,2.14460495831032,2.69645822596266,1.29682829924817,1.99141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,1.11642284300551,0,0,0.179397413521912,0,3.32555742299888,0,0,0,0,0,0.476087281772027,0.585400943573396,0.630540576424764,0.8858587585951,0.478364305972461,2.29408640602033,1.89953480052485,1.59113964439663,3.01582567878545,2.71952841909355,1.96705709207614,2.48343071674259,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,1.31909002353184,3.71368181400583,2.65376869683886,2.38744688006273,2.1338316966858,0.874442509889552,0,4.78438466233988,0.412773735926445,0,2.26042148405629,2.05041341581538,3.88922894451088,0.169978429993855,0,0.276399947608848,4.77335309007557,0,0,0.108005340821801,0.627264888043406,1.52853794622324,3.10187996685088,2.72756403893609,3.40282724579238,1.42576470620972,4.97071450469541,0,0,0,0,0,0,0,0,0,0,0,3.47612232690996,0,0.205421914329655,0.389762468933385,0,0.79472541912506,5.4087952283986,4.87375439676105,3.02899349844443,1.600342939755,2.82313318383153,4.67797827550812,4.13710919053417,4.79195298944433,7.02864189207155,0,0,0,9.65947970160952,1.12609485270709,0.549454872801795,5.78794623513478,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0,0,0,0.128050304809739,0.229741875822453,0,0,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.365855945745545,0.789209134313529,0,0,0.355905054372522,0,0,0,1.92906610981141,1.49886346762768,1.87145286756327,1.50409737833809,0.765153328275374,0.441182838239031,0.463735671240843
|short_description=p2@Dennd2d
|short_description=p2@Dennd2d
}}
}}

Latest revision as of 06:20, 27 September 2015

Short description:p2@Dennd2d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Dennd2d_5end
Coexpression cluster:MCL_coexpression_mm9:291
Association with transcript: 9bp_to_ENSMUST00000061206, NM_028110, uc008qwb.1_5end
EntrezGene:Dennd2d
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Dennd2d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.87
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.54
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E975.02
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E724.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F243.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E684.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F177.30
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E484.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8107.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.44
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B93.80
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I936.99
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A144.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H930.04
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G43.71
skin, neonate N03.CNhs11215.662-22H32.65
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G24.78
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A92.73
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F85.41
thymus, neonate N03.CNhs11137.2104-43C74.87
thymus, neonate N06.CNhs11197.681-26C43.03
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E42.82
thymus, neonate N20.CNhs11186.820-7A24.68
thymus, neonate N25.CNhs11125.1362-25G74.14
thymus, neonate N30.CNhs11132.1393-42G24.79
tongue, adult.CNhs10499.32-1B47.03
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E49.66
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell3.65e-129
alpha-beta T cell3.65e-129
immature T cell3.65e-129
mature T cell3.65e-129
immature alpha-beta T cell3.65e-129
CD4-positive, alpha-beta T cell5.42e-118
T cell2.11e-0911
pro-T cell2.11e-0911
thymocyte1.14e-086
double negative thymocyte1.14e-086
naive T cell1.14e-086
double-positive, alpha-beta thymocyte1.14e-086
CD4-positive, alpha-beta thymocyte1.14e-086
naive thymus-derived CD4-positive, alpha-beta T cell1.14e-086
DN4 thymocyte1.14e-086
DN1 thymic pro-T cell1.14e-086
DN2 thymocyte1.14e-086
DN3 thymocyte1.14e-086
immature single positive thymocyte1.14e-086
early T lineage precursor1.14e-086
mature CD4 single-positive thymocyte1.14e-086
resting double-positive thymocyte1.14e-086
double-positive blast1.14e-086
CD69-positive double-positive thymocyte1.14e-086
CD69-positive, CD4-positive single-positive thymocyte1.14e-086
CD4-positive, CD8-intermediate double-positive thymocyte1.14e-086
CD24-positive, CD4 single-positive thymocyte1.14e-086
hematopoietic cell1.49e-0832
hematopoietic oligopotent progenitor cell1.49e-0832
hematopoietic stem cell1.49e-0832
hematopoietic multipotent progenitor cell1.49e-0832
lymphoid lineage restricted progenitor cell2.24e-0812
hematopoietic lineage restricted progenitor cell3.62e-0825
leukocyte1.45e-0717
nongranular leukocyte1.45e-0717
lymphocyte1.64e-0713
common lymphoid progenitor1.64e-0713

Uber anatomy
Ontology termp-valuen
hemolymphoid system5.33e-1448
immune system5.33e-1448
hematopoietic system8.14e-1245
blood island8.14e-1245
digestive system3.62e-11116
digestive tract3.62e-11116
primitive gut3.62e-11116
endoderm-derived structure9.96e-11118
endoderm9.96e-11118
presumptive endoderm9.96e-11118
hemopoietic organ1.25e-1029
immune organ1.25e-1029
mixed endoderm/mesoderm-derived structure3.23e-1035
subdivision of digestive tract3.69e-10114
pharynx7.58e-1024
upper respiratory tract7.58e-1024
chordate pharynx7.58e-1024
pharyngeal arch system7.58e-1024
pharyngeal region of foregut7.58e-1024
gland of gut8.19e-1024
thymus5.94e-0923
neck5.94e-0923
respiratory system epithelium5.94e-0923
hemolymphoid system gland5.94e-0923
pharyngeal epithelium5.94e-0923
thymic region5.94e-0923
pharyngeal gland5.94e-0923
entire pharyngeal arch endoderm5.94e-0923
thymus primordium5.94e-0923
early pharyngeal endoderm5.94e-0923
segment of respiratory tract3.53e-0827
respiratory system3.82e-0742
gastrointestinal system4.34e-0747
adult organism6.24e-0751
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:106288977..106289010,%2B&oldid=4296856"