FFCP PHASE1:Mm9::chr8:108734893..108734911,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:108734893..108734911,+
|short_description=p2@Prmt7
|description=CAGE_peak_2_at_Prmt7_5end
|association_with_transcript=-11bp_to_ENSMUST00000109297_5end
|E...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=214572 | |EntrezGene=214572 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z1C9 | |UniProt=D3Z1C9 | ||
|association_with_transcript=-11bp_to_ENSMUST00000109297_5end | |||
|cluster_id=chr8:108734893..108734911,+ | |||
|description=CAGE_peak_2_at_Prmt7_5end | |||
|id=chr8:108734893..108734911,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.53e-11!23;CL:0000337!3.53e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.63e-15,23;CL:0000337,2.63e-15,23;CL:0000540,2.77e-08,33;CL:0000047,2.77e-08,33;CL:0000031,2.77e-08,33;CL:0000404,2.77e-08,33;CL:0002319,1.76e-07,43;CL:0000221,3.95e-07,44;CL:0000133,3.95e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.57e-11!52;UBERON:0005068!2.57e-11!52;UBERON:0006241!2.57e-11!52;UBERON:0007135!2.57e-11!52;UBERON:0002616!8.27e-11!49;UBERON:0002020!1.13e-10!34;UBERON:0000955!1.22e-10!50;UBERON:0006238!1.22e-10!50;UBERON:0000033!1.46e-10!63;UBERON:0001017!1.50e-10!73;UBERON:0005743!1.50e-10!73;UBERON:0000073!1.60e-10!75;UBERON:0001016!1.60e-10!75;UBERON:0002346!3.84e-09!71;UBERON:0003075!3.84e-09!71;UBERON:0007284!3.84e-09!71;UBERON:0002791!4.78e-09!29;UBERON:0003528!4.78e-09!29;UBERON:0001893!4.78e-09!29;UBERON:0003056!1.35e-08!49;UBERON:0007811!5.29e-08!86;UBERON:0003080!5.43e-08!40;UBERON:0004121!5.43e-08!102;UBERON:0000924!5.43e-08!102;UBERON:0006601!5.43e-08!102;UBERON:0002780!1.60e-07!39;UBERON:0001890!1.60e-07!39;UBERON:0006240!1.60e-07!39;UBERON:0000153!4.07e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.28e-15,54;UBERON:0002020,1.74e-13,34;UBERON:0001049,3.27e-13,52;UBERON:0005068,3.27e-13,52;UBERON:0006241,3.27e-13,52;UBERON:0007135,3.27e-13,52;UBERON:0001017,8.31e-12,73;UBERON:0001016,1.06e-11,75;UBERON:0003528,2.39e-11,29;UBERON:0002791,2.39e-11,29;UBERON:0001893,2.39e-11,29;UBERON:0002346,2.80e-11,64;UBERON:0003075,2.80e-11,64;UBERON:0007284,2.80e-11,64;UBERON:0002616,1.48e-10,46;UBERON:0000955,4.09e-10,47;UBERON:0006238,4.09e-10,47;UBERON:0003080,2.33e-09,40;UBERON:0004121,5.92e-09,95;UBERON:0000924,5.92e-09,95;UBERON:0006601,5.92e-09,95;UBERON:0003056,9.99e-09,49;UBERON:0002780,1.03e-08,39;UBERON:0001890,1.03e-08,39;UBERON:0006240,1.03e-08,39;UBERON:0010371,2.37e-08,73;UBERON:0002420,4.27e-07,8;UBERON:0007245,4.27e-07,8;UBERON:0010009,4.27e-07,8;UBERON:0010011,4.27e-07,8;UBERON:0000454,4.27e-07,8 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0.33575854382378,0,0.387369970324729,0,0.468129052643987,0.856089841127525,1.99430397488341,0.856003649656029,0.262261207256992,0.666219523631325,0.607425802169478,0.699561878128147,0.630924330716475,0.822686601634433,0,3.40173160604279,0.297872853602656,1.04479915655574,0.319984845586813,0.45881856213434,0,0,0.430942465371778,0.190023419456374,0.504060259519861,0.443461021310609,4.44521471421742,5.53558308826113,0,1.73310971850765,1.82858109894342,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.550640256485045,0.782391344348039,1.52617609466313,0.439372365468944,0.777719596297134,2.2397827460058,1.43752564364972,0.503347818173209,0,1.68046899571232,1.28629718017973,0,0.515672092277442,2.22548106945558,0.528990979272033,2.53532561402472,0.677689064138264,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,1.8664130215526,1.89008313664367,2.10324961351382,0.571301968807607,1.76694832761291,1.34739879136449,1.62937300731002,2.75765635983006,5.50579404996943,1.91531007127782,2.91852413186863,1.71452174049252,3.38504281328916,4.16730696445408,3.35019598801657,3.93933827022176,1.5279824777681,2.94628585473668,1.70846016958924,2.60959224155421,1.06016670666458,0.529000920747499,0,0,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,0.702222100658759,0.170430322578058,1.29893002301434,1.06001872353102,0.563373679106722,0,0,0,1.29894624606728,1.26679932737549,2.02209778005913,0.79928715803342,0,0.29688427812965,0.867426633830679,0.304465478312141,0.922461989024234,0.452167921657868,0.470354828542819,0.502666365318702,0.247194967734374,0.433798070759735,0.884610551949874,0.647067399789637,0.220841518460394,0.484875253135222,0,0.585561594023094,1.46612694769419,0.510914110417183,0.718890747035522,1.19980546198682,0.635351135365324,2.24685959107234,1.37250180845588,1.50785222535437,1.21677024134594,0.767146371990992,1.45451631191692,0.811206315338788,0.407357455401265,0.248813941220186,0.252722758433675,0.210441855886474,1.43132487258974,0.919608417733892,1.62055916824814,0.90422890701429,0.884474488967262,1.2811372028485,1.12442069471675,0.776110112217047,1.5089759505299,0.756424320671277,1.05570674498369,0.876782929710299,0.556094498451196,0,0.205782136407943,1.79130840136644,1.40442637462647,1.54408744268829,0.852490498186778,1.86413195281952,0.234526059981096,1.44049649168812,0.946978942340841,0.983821158737019,0.771335564436891,0.697601834251224,1.3413670069981,0.467061369468678,0.822799249567402,1.14917224855367,0.56748166682099,0.730999937126662,0.658650345873152,0.402619256281115,1.68231958851302,1.44066457330998,0,0.793351699990633,0.853153002140936,1.16118335930219,1.41754207454303,0.605050573870028,0.889512175379481,0.951128130562796,0,0.494096864172033,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0.597423819763102,1.89667900953082,1.25673363870702,0,1.01825663922657,0.775809948670503,0.280543279561274,0.379419222745544,0.147610147979602,0.941992367048249,0.370191491765402,0.296452627087149,1.66845105716094,0.982794975566015,0.674586337154561,1.21716072833102,0.72353147925725,0.25462585178142,0.287696137450811,0.810676133875177,0.549122826376163,0,0,0,0.505157755894224,0.179397413521912,0.482443521363367,0.184753190166605,2.08440552947533,1.14075483509418,1.18821560042632,0.704070744865506,0.335012514883631,0.476087281772027,0.975668239288994,0,0.44292937929755,0.318909537314974,0.491589944147214,0.863424909329478,0.433947175744535,0,0,0.491764273019036,0.275936746304732,3.05046120976805,1.64096361229084,0.655739781506702,0.252470927204373,0.631016438832513,0.390438744296638,0,0.716906393857656,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,0.642642632843614,0.425820255624806,0.890328018336276,1.30309567482861,0.164970122972535,0,1.45668381692989,2.11626489875326,0.754420319023592,0,0.922305443831782,0,0.363533729477506,0,0.316036757935816,0,1.03135543248187,0.340439605753788,1.08036656418786,0.776152102696527,0.857348140126369,0.354680467284547,0.356737635204141,1.48094118541909,0.304464949114599,0.23467170806371,0.42366414172764,0,0.49465875882444,0.161464426695906,0.542816324353403,0.596861720015682,0.820704498725306,0,1.8542530201051,0,1.44470807574256,0.370389054739423,0.376736914009382,0.956859594047176,0.915112692826091,0.339956859987711,0.419854356970974,0.414599921413271,0,1.42351197111511,1.21991680276109,0.972048067396211,0.627264888043406,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,0.518459893167171,1.24267862617385,19.1655599152625,0.897099276263873,2.31641886639937,1.94451188344048,1.80823752868824,1.85851738039856,0.938857909166032,1.69265700297135,3.46035836604846,8.69702834973622,16.7057403629562,0,1.41907650703115,1.43795340030758,1.03936658382236,1.07416017400489,0.993406773906324,0.721172697119813,0.590758108698309,1.21159739937777,0.762068066549998,0.907435666231565,0.487289403698762,0.865906574762965,0.116876902181569,0,1.33191572024439,2.33256027184637,2.18250001273302,0.579568782096571,0.187682475451182,0.36630324853453,1.50057865355346,0,1.12950368523413,0,1.71868654031819,1.3748254587495,2.05524755931193,1.5107877947794,2.02506750069542,0.900642406448441,0.906284817968409,1.03552062350364,2.07574695168353,2.39414924040619,1.70733605754134,0.243106717068294,0.628839487883947,0.551530525350042,1.77797382241292,0.412070114477788,0,0.505394423527595,0.50695859978048,1.32038438970253,0.561849044819294,0.512201219238954,0.746661096422973,0.476293691283074,0.811190281613988,1.15745532278223,1.23625770240992,0.147198920134397,0.685738504770831,0.887379030796687,0.476872379894642,0.581385666529314,0.658765662907314,1.01537529470012,0.365855945745545,1.05227884575137,0.543216455383447,1.12228454331548,0.593175090620871,0.689531376628944,0.818462086339379,0.929621047115796,0.578719832943424,1.24905288968973,0.467863216890817,0,0.57386499620653,0.661774257358546,0.927471342481686 | |phase1_expression=0.80074423552397,0,0,0,0,0.33575854382378,0,0.387369970324729,0,0.468129052643987,0.856089841127525,1.99430397488341,0.856003649656029,0.262261207256992,0.666219523631325,0.607425802169478,0.699561878128147,0.630924330716475,0.822686601634433,0,3.40173160604279,0.297872853602656,1.04479915655574,0.319984845586813,0.45881856213434,0,0,0.430942465371778,0.190023419456374,0.504060259519861,0.443461021310609,4.44521471421742,5.53558308826113,0,1.73310971850765,1.82858109894342,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.550640256485045,0.782391344348039,1.52617609466313,0.439372365468944,0.777719596297134,2.2397827460058,1.43752564364972,0.503347818173209,0,1.68046899571232,1.28629718017973,0,0.515672092277442,2.22548106945558,0.528990979272033,2.53532561402472,0.677689064138264,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,1.8664130215526,1.89008313664367,2.10324961351382,0.571301968807607,1.76694832761291,1.34739879136449,1.62937300731002,2.75765635983006,5.50579404996943,1.91531007127782,2.91852413186863,1.71452174049252,3.38504281328916,4.16730696445408,3.35019598801657,3.93933827022176,1.5279824777681,2.94628585473668,1.70846016958924,2.60959224155421,1.06016670666458,0.529000920747499,0,0,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,0.702222100658759,0.170430322578058,1.29893002301434,1.06001872353102,0.563373679106722,0,0,0,1.29894624606728,1.26679932737549,2.02209778005913,0.79928715803342,0,0.29688427812965,0.867426633830679,0.304465478312141,0.922461989024234,0.452167921657868,0.470354828542819,0.502666365318702,0.247194967734374,0.433798070759735,0.884610551949874,0.647067399789637,0.220841518460394,0.484875253135222,0,0.585561594023094,1.46612694769419,0.510914110417183,0.718890747035522,1.19980546198682,0.635351135365324,2.24685959107234,1.37250180845588,1.50785222535437,1.21677024134594,0.767146371990992,1.45451631191692,0.811206315338788,0.407357455401265,0.248813941220186,0.252722758433675,0.210441855886474,1.43132487258974,0.919608417733892,1.62055916824814,0.90422890701429,0.884474488967262,1.2811372028485,1.12442069471675,0.776110112217047,1.5089759505299,0.756424320671277,1.05570674498369,0.876782929710299,0.556094498451196,0,0.205782136407943,1.79130840136644,1.40442637462647,1.54408744268829,0.852490498186778,1.86413195281952,0.234526059981096,1.44049649168812,0.946978942340841,0.983821158737019,0.771335564436891,0.697601834251224,1.3413670069981,0.467061369468678,0.822799249567402,1.14917224855367,0.56748166682099,0.730999937126662,0.658650345873152,0.402619256281115,1.68231958851302,1.44066457330998,0,0.793351699990633,0.853153002140936,1.16118335930219,1.41754207454303,0.605050573870028,0.889512175379481,0.951128130562796,0,0.494096864172033,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0.597423819763102,1.89667900953082,1.25673363870702,0,1.01825663922657,0.775809948670503,0.280543279561274,0.379419222745544,0.147610147979602,0.941992367048249,0.370191491765402,0.296452627087149,1.66845105716094,0.982794975566015,0.674586337154561,1.21716072833102,0.72353147925725,0.25462585178142,0.287696137450811,0.810676133875177,0.549122826376163,0,0,0,0.505157755894224,0.179397413521912,0.482443521363367,0.184753190166605,2.08440552947533,1.14075483509418,1.18821560042632,0.704070744865506,0.335012514883631,0.476087281772027,0.975668239288994,0,0.44292937929755,0.318909537314974,0.491589944147214,0.863424909329478,0.433947175744535,0,0,0.491764273019036,0.275936746304732,3.05046120976805,1.64096361229084,0.655739781506702,0.252470927204373,0.631016438832513,0.390438744296638,0,0.716906393857656,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,0.642642632843614,0.425820255624806,0.890328018336276,1.30309567482861,0.164970122972535,0,1.45668381692989,2.11626489875326,0.754420319023592,0,0.922305443831782,0,0.363533729477506,0,0.316036757935816,0,1.03135543248187,0.340439605753788,1.08036656418786,0.776152102696527,0.857348140126369,0.354680467284547,0.356737635204141,1.48094118541909,0.304464949114599,0.23467170806371,0.42366414172764,0,0.49465875882444,0.161464426695906,0.542816324353403,0.596861720015682,0.820704498725306,0,1.8542530201051,0,1.44470807574256,0.370389054739423,0.376736914009382,0.956859594047176,0.915112692826091,0.339956859987711,0.419854356970974,0.414599921413271,0,1.42351197111511,1.21991680276109,0.972048067396211,0.627264888043406,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,0.518459893167171,1.24267862617385,19.1655599152625,0.897099276263873,2.31641886639937,1.94451188344048,1.80823752868824,1.85851738039856,0.938857909166032,1.69265700297135,3.46035836604846,8.69702834973622,16.7057403629562,0,1.41907650703115,1.43795340030758,1.03936658382236,1.07416017400489,0.993406773906324,0.721172697119813,0.590758108698309,1.21159739937777,0.762068066549998,0.907435666231565,0.487289403698762,0.865906574762965,0.116876902181569,0,1.33191572024439,2.33256027184637,2.18250001273302,0.579568782096571,0.187682475451182,0.36630324853453,1.50057865355346,0,1.12950368523413,0,1.71868654031819,1.3748254587495,2.05524755931193,1.5107877947794,2.02506750069542,0.900642406448441,0.906284817968409,1.03552062350364,2.07574695168353,2.39414924040619,1.70733605754134,0.243106717068294,0.628839487883947,0.551530525350042,1.77797382241292,0.412070114477788,0,0.505394423527595,0.50695859978048,1.32038438970253,0.561849044819294,0.512201219238954,0.746661096422973,0.476293691283074,0.811190281613988,1.15745532278223,1.23625770240992,0.147198920134397,0.685738504770831,0.887379030796687,0.476872379894642,0.581385666529314,0.658765662907314,1.01537529470012,0.365855945745545,1.05227884575137,0.543216455383447,1.12228454331548,0.593175090620871,0.689531376628944,0.818462086339379,0.929621047115796,0.578719832943424,1.24905288968973,0.467863216890817,0,0.57386499620653,0.661774257358546,0.927471342481686 | ||
|short_description=p2@Prmt7 | |||
}} | }} |
Latest revision as of 08:36, 27 September 2015
Short description: | p2@Prmt7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Prmt7_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -11bp_to_ENSMUST00000109297_5end |
EntrezGene: | Prmt7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.63e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.63e-15 | 23 |
neuron | 2.77e-08 | 33 |
neuronal stem cell | 2.77e-08 | 33 |
neuroblast | 2.77e-08 | 33 |
electrically signaling cell | 2.77e-08 | 33 |
neural cell | 1.76e-07 | 43 |
ectodermal cell | 3.95e-07 | 44 |
neurectodermal cell | 3.95e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 8.28e-15 | 54 |
gray matter | 1.74e-13 | 34 |
neural tube | 3.27e-13 | 52 |
neural rod | 3.27e-13 | 52 |
future spinal cord | 3.27e-13 | 52 |
neural keel | 3.27e-13 | 52 |
central nervous system | 8.31e-12 | 73 |
nervous system | 1.06e-11 | 75 |
brain grey matter | 2.39e-11 | 29 |
regional part of telencephalon | 2.39e-11 | 29 |
telencephalon | 2.39e-11 | 29 |
neurectoderm | 2.80e-11 | 64 |
neural plate | 2.80e-11 | 64 |
presumptive neural plate | 2.80e-11 | 64 |
regional part of brain | 1.48e-10 | 46 |
brain | 4.09e-10 | 47 |
future brain | 4.09e-10 | 47 |
anterior neural tube | 2.33e-09 | 40 |
ectoderm-derived structure | 5.92e-09 | 95 |
ectoderm | 5.92e-09 | 95 |
presumptive ectoderm | 5.92e-09 | 95 |
pre-chordal neural plate | 9.99e-09 | 49 |
regional part of forebrain | 1.03e-08 | 39 |
forebrain | 1.03e-08 | 39 |
future forebrain | 1.03e-08 | 39 |
ecto-epithelium | 2.37e-08 | 73 |
basal ganglion | 4.27e-07 | 8 |
nuclear complex of neuraxis | 4.27e-07 | 8 |
aggregate regional part of brain | 4.27e-07 | 8 |
collection of basal ganglia | 4.27e-07 | 8 |
cerebral subcortex | 4.27e-07 | 8 |