FFCP PHASE1:Mm9::chr1:7078998..7079074,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319263 | |EntrezGene=319263 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P59913,E9QAJ0,Q3TGS5,Q3TSP0,D3Z0C8 | |UniProt=P59913,E9QAJ0,Q3TGS5,Q3TSP0,D3Z0C8 | ||
|association_with_transcript=0bp_to_ENSMUST00000061280,ENSMUST00000172291,NM_183028,uc007agb.1,uc007agc.1,uc011why.1_5end | |association_with_transcript=0bp_to_ENSMUST00000061280,ENSMUST00000172291,NM_183028,uc007agb.1,uc007agc.1,uc011why.1_5end | ||
|cluster_id=chr1:7078998..7079074,+ | |||
|description=CAGE_peak_2_at_Pcmtd1_5end | |description=CAGE_peak_2_at_Pcmtd1_5end | ||
|id=chr1:7078998..7079074,+ | |id=chr1:7078998..7079074,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.37e-09!23;CL:0000337!4.37e-09!23 | |ontology_enrichment_celltype=CL:0000117!4.37e-09!23;CL:0000337!4.37e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.37e-09,23;CL:0000337,4.37e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!3.39e-18!94;UBERON:0007811!2.67e-17!86;UBERON:0002020!9.78e-15!34;UBERON:0001049!8.61e-13!52;UBERON:0005068!8.61e-13!52;UBERON:0006241!8.61e-13!52;UBERON:0007135!8.61e-13!52;UBERON:0002791!9.88e-13!29;UBERON:0003528!9.88e-13!29;UBERON:0001893!9.88e-13!29;UBERON:0000955!3.26e-12!50;UBERON:0006238!3.26e-12!50;UBERON:0002616!1.18e-11!49;UBERON:0000033!3.90e-11!63;UBERON:0003080!4.14e-10!40;UBERON:0000956!6.85e-10!21;UBERON:0001869!6.85e-10!21;UBERON:0000203!6.85e-10!21;UBERON:0002780!1.31e-09!39;UBERON:0001890!1.31e-09!39;UBERON:0006240!1.31e-09!39;UBERON:0001017!2.80e-09!73;UBERON:0005743!2.80e-09!73;UBERON:0003056!1.09e-08!49;UBERON:0000073!1.12e-08!75;UBERON:0001016!1.12e-08!75;UBERON:0002021!5.94e-08!10;UBERON:0000411!5.94e-08!10;UBERON:0001950!5.94e-08!10;UBERON:0002619!6.25e-08!17;UBERON:0002346!7.15e-08!71;UBERON:0003075!7.15e-08!71;UBERON:0007284!7.15e-08!71;UBERON:0000064!7.43e-08!99;UBERON:0004121!1.25e-07!102;UBERON:0000924!1.25e-07!102;UBERON:0006601!1.25e-07!102;UBERON:0000477!3.28e-07!154;UBERON:0000475!8.51e-07!200 | |ontology_enrichment_uberon=UBERON:0000153!3.39e-18!94;UBERON:0007811!2.67e-17!86;UBERON:0002020!9.78e-15!34;UBERON:0001049!8.61e-13!52;UBERON:0005068!8.61e-13!52;UBERON:0006241!8.61e-13!52;UBERON:0007135!8.61e-13!52;UBERON:0002791!9.88e-13!29;UBERON:0003528!9.88e-13!29;UBERON:0001893!9.88e-13!29;UBERON:0000955!3.26e-12!50;UBERON:0006238!3.26e-12!50;UBERON:0002616!1.18e-11!49;UBERON:0000033!3.90e-11!63;UBERON:0003080!4.14e-10!40;UBERON:0000956!6.85e-10!21;UBERON:0001869!6.85e-10!21;UBERON:0000203!6.85e-10!21;UBERON:0002780!1.31e-09!39;UBERON:0001890!1.31e-09!39;UBERON:0006240!1.31e-09!39;UBERON:0001017!2.80e-09!73;UBERON:0005743!2.80e-09!73;UBERON:0003056!1.09e-08!49;UBERON:0000073!1.12e-08!75;UBERON:0001016!1.12e-08!75;UBERON:0002021!5.94e-08!10;UBERON:0000411!5.94e-08!10;UBERON:0001950!5.94e-08!10;UBERON:0002619!6.25e-08!17;UBERON:0002346!7.15e-08!71;UBERON:0003075!7.15e-08!71;UBERON:0007284!7.15e-08!71;UBERON:0000064!7.43e-08!99;UBERON:0004121!1.25e-07!102;UBERON:0000924!1.25e-07!102;UBERON:0006601!1.25e-07!102;UBERON:0000477!3.28e-07!154;UBERON:0000475!8.51e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.78e-15,34;UBERON:0000073,1.25e-13,54;UBERON:0001049,8.61e-13,52;UBERON:0005068,8.61e-13,52;UBERON:0006241,8.61e-13,52;UBERON:0007135,8.61e-13,52;UBERON:0003528,9.88e-13,29;UBERON:0002791,9.88e-13,29;UBERON:0001893,9.88e-13,29;UBERON:0010371,8.70e-12,73;UBERON:0000955,6.67e-11,47;UBERON:0006238,6.67e-11,47;UBERON:0002616,2.33e-10,46;UBERON:0002346,2.41e-10,64;UBERON:0003075,2.41e-10,64;UBERON:0007284,2.41e-10,64;UBERON:0003080,4.13e-10,40;UBERON:0000956,6.85e-10,21;UBERON:0001869,6.85e-10,21;UBERON:0000203,6.85e-10,21;UBERON:0002780,1.31e-09,39;UBERON:0001890,1.31e-09,39;UBERON:0006240,1.31e-09,39;UBERON:0004121,1.59e-09,95;UBERON:0000924,1.59e-09,95;UBERON:0006601,1.59e-09,95;UBERON:0001017,2.80e-09,73;UBERON:0003056,1.09e-08,49;UBERON:0001016,1.12e-08,75;UBERON:0002021,5.94e-08,10;UBERON:0000411,5.94e-08,10;UBERON:0001950,5.94e-08,10;UBERON:0002619,6.25e-08,17 | |||
|phase1_expression=9.12848428497326,1.04692622291808,0,2.41971369045464,5.00895729946347,2.85394762250213,1.86890112476421,30.6022276556536,16.1907030474417,24.3427107374873,9.58820622062828,11.0883301003518,29.4465255481674,31.9084468829341,7.32841475994458,8.70643649776252,3.49780939064073,25.3947043113381,29.2053743580224,22.9170411970936,13.6069264241712,8.24114894967348,7.31359409589019,2.3998863419011,3.44113921600755,2.8711598205751,1.29228598847722,1.29282739611533,3.23039813075836,3.78045194639896,1.77384408524244,3.17515336729816,0.61506478758457,15.8481681015439,1.44425809875637,4.3221007793208,1.83752420636132,6.69650609179052,9.37602413428561,7.85285615960697,15.2940186888064,9.56263678941824,7.76816564849846,5.91715044485213,5.87986201073184,7.15832333430558,2.34717403304412,3.92445281484804,2.41654801007919,5.05517737593137,4.61955191363696,1.43752564364972,23.6573474541408,29.0144856804538,35.6259427091012,4.11615097657515,5.15760191889762,5.67239301505187,16.7922662513466,10.0508286061686,14.5781222806421,4.40497891689872,1.77858959222228,1.7997994345628,1.97773272513395,0.7104801149461,1.79760066311043,1.92109152660777,28.7220226094483,21.0609263797437,23.7667206327062,16.5677570954206,18.3320888989839,24.2531782445609,21.2776945660485,26.6573448116906,22.0231761998777,27.7081523644857,26.4203237200739,14.6393779380515,12.7167824607349,13.022834263919,18.9844439320939,19.1339287410771,22.3085441754143,21.2132581541041,26.338760947834,23.6727296198132,4.31639301999149,7.3304413303582,8.40607017234866,5.16254326188832,2.719885334831,4.31762553310254,7.14754059192436,12.0967259516281,8.84799846830037,5.28333999991979,3.89679006904303,4.59341446863442,9.71819596459095,11.5493829672886,5.09610479413291,7.11066703153331,5.41227602528035,4.05375784760158,5.05524445014783,7.87868770061514,25.63485048107,9.20341262201914,3.46970653532272,4.56698217468212,4.15107895060905,4.37095657602605,7.05532242814229,6.03199638382442,5.43828929015623,14.3153363350713,4.42305275974937,7.76480879747564,6.40440403535141,5.81850303762267,9.31958806090611,34.5481340473626,28.6941988334433,4.34276993854605,4.43315960671905,1.19980546198682,3.68503658511888,31.1564529962031,82.3501085073528,53.6544083521931,72.1370928797947,63.1617179605916,28.0513860155406,49.3213439725983,9.16554274652847,10.0769646194175,19.2069296409593,11.3638602178696,5.33493816147085,6.43725892413724,7.38254732201932,9.19299388797862,11.0219128625151,7.55870949680614,8.99536555773397,8.2785078636485,4.095791865724,10.7790465695657,9.85326295318113,10.302199424096,12.7901734643775,15.3230953269753,15.2278780941878,13.335295876839,0.702213187313235,4.37491442095016,3.6941254921427,6.42089894860056,5.62862543954631,6.66229627405755,8.52281048106757,6.68998387941173,5.707883176833,6.97601834251224,6.70683503499048,7.70651259623319,6.58239399653922,8.53670813211295,11.3496333364198,8.91819923294527,7.68425403518677,8.18659154438268,69.8162629232902,43.5286510364373,6.27795687669216,1.85115396664481,4.90562976231038,5.57368012465052,6.57224052742676,6.25218926332362,6.22658522765637,4.94586627892654,3.79623249235609,3.62337700392824,4.02136334080431,5.96869416123452,7.01870713628832,2.69645822596266,3.24207074812041,4.18196673834171,1.51734320762465,7.5404018322421,11.270773567308,5.49858585182348,5.23671715352589,6.94344616914154,9.04282480876879,6.6424566590821,7.69293766422737,5.05928372079382,6.81841042300442,4.33797274861845,5.11053387294328,2.02375901146368,4.86864291332407,5.54707467430559,4.58326533206556,8.0554918486227,6.32327384422638,4.3929826110093,5.75072826109418,6.32639611036456,3.74445207737473,4.79899868099512,6.45830688678884,7.23665282045051,9.79191907883005,6.63219941196697,5.86673915191293,7.1292936025579,5.63256595892405,6.86775655511445,5.95109102215034,8.78101415360095,10.5615546551148,12.1805579306826,11.0023790373666,7.20998584749247,8.80693407516067,7.08780387049407,13.5712155545345,4.35124547054968,8.35999264132362,8.55403913544671,23.6009367282054,26.8414762296145,7.70494243270374,9.84636616097055,7.88770548540642,4.29482618726302,6.67812532971677,4.06246956519338,7.12955757063661,8.49229592366497,3.64329631507405,6.13737301613755,8.30104333687699,53.6606598424418,7.94864477166304,4.62970569534864,11.0763132360432,10.2281476242972,2.65490276679926,3.39892890616974,2.72091201268276,11.3163047853539,7.38254732201932,8.30074899448604,6.97756391554197,9.81541069589265,7.12994756769443,7.58488219045958,8.4334886859999,7.21948802737308,7.83011093233712,7.20244376125241,2.19909762430683,5.78709994585299,11.1724347194632,7.49149033928696,6.91105886528908,1.522324745573,5.16277757740163,10.1679394014634,8.15955072803359,21.6000991353339,25.5113794179531,16.646367280171,15.9958940964203,13.459553779095,4.08073171281791,30.2243242277131,9.22702756308404,6.3979929068599,8.14855920426731,6.78126445216888,6.97140561377228,8.69357058184786,9.85874893964361,8.11718423477216,9.67399816630967,0.954670618015114,6.48488786841327,7.522820283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|phase1_expression=9.12848428497326,1.04692622291808,0,2.41971369045464,5.00895729946347,2.85394762250213,1.86890112476421,30.6022276556536,16.1907030474417,24.3427107374873,9.58820622062828,11.0883301003518,29.4465255481674,31.9084468829341,7.32841475994458,8.70643649776252,3.49780939064073,25.3947043113381,29.2053743580224,22.9170411970936,13.6069264241712,8.24114894967348,7.31359409589019,2.3998863419011,3.44113921600755,2.8711598205751,1.29228598847722,1.29282739611533,3.23039813075836,3.78045194639896,1.77384408524244,3.17515336729816,0.61506478758457,15.8481681015439,1.44425809875637,4.3221007793208,1.83752420636132,6.69650609179052,9.37602413428561,7.85285615960697,15.2940186888064,9.56263678941824,7.76816564849846,5.91715044485213,5.87986201073184,7.15832333430558,2.34717403304412,3.92445281484804,2.41654801007919,5.05517737593137,4.61955191363696,1.43752564364972,23.6573474541408,29.0144856804538,35.6259427091012,4.11615097657515,5.15760191889762,5.67239301505187,16.7922662513466,10.0508286061686,14.5781222806421,4.40497891689872,1.77858959222228,1.7997994345628,1.97773272513395,0.7104801149461,1.79760066311043,1.92109152660777,28.7220226094483,21.0609263797437,23.7667206327062,16.5677570954206,18.3320888989839,24.2531782445609,21.2776945660485,26.6573448116906,22.0231761998777,27.7081523644857,26.4203237200739,14.6393779380515,12.7167824607349,13.022834263919,18.9844439320939,19.1339287410771,22.3085441754143,21.2132581541041,26.338760947834,23.6727296198132,4.31639301999149,7.3304413303582,8.40607017234866,5.16254326188832,2.719885334831,4.31762553310254,7.14754059192436,12.0967259516281,8.84799846830037,5.28333999991979,3.89679006904303,4.59341446863442,9.71819596459095,11.5493829672886,5.09610479413291,7.11066703153331,5.41227602528035,4.05375784760158,5.05524445014783,7.87868770061514,25.63485048107,9.20341262201914,3.46970653532272,4.56698217468212,4.15107895060905,4.37095657602605,7.05532242814229,6.03199638382442,5.43828929015623,14.3153363350713,4.42305275974937,7.76480879747564,6.40440403535141,5.81850303762267,9.31958806090611,34.5481340473626,28.6941988334433,4.34276993854605,4.43315960671905,1.19980546198682,3.68503658511888,31.1564529962031,82.3501085073528,53.6544083521931,72.1370928797947,63.1617179605916,28.0513860155406,49.3213439725983,9.16554274652847,10.0769646194175,19.2069296409593,11.3638602178696,5.33493816147085,6.43725892413724,7.38254732201932,9.19299388797862,11.0219128625151,7.55870949680614,8.99536555773397,8.2785078636485,4.095791865724,10.7790465695657,9.85326295318113,10.302199424096,12.7901734643775,15.3230953269753,15.2278780941878,13.335295876839,0.702213187313235,4.37491442095016,3.6941254921427,6.42089894860056,5.62862543954631,6.66229627405755,8.52281048106757,6.68998387941173,5.707883176833,6.97601834251224,6.70683503499048,7.70651259623319,6.58239399653922,8.53670813211295,11.3496333364198,8.91819923294527,7.68425403518677,8.18659154438268,69.8162629232902,43.5286510364373,6.27795687669216,1.85115396664481,4.90562976231038,5.57368012465052,6.57224052742676,6.25218926332362,6.22658522765637,4.94586627892654,3.79623249235609,3.62337700392824,4.02136334080431,5.96869416123452,7.01870713628832,2.69645822596266,3.24207074812041,4.18196673834171,1.51734320762465,7.5404018322421,11.270773567308,5.49858585182348,5.23671715352589,6.94344616914154,9.04282480876879,6.6424566590821,7.69293766422737,5.05928372079382,6.81841042300442,4.33797274861845,5.11053387294328,2.02375901146368,4.86864291332407,5.54707467430559,4.58326533206556,8.0554918486227,6.32327384422638,4.3929826110093,5.75072826109418,6.32639611036456,3.74445207737473,4.79899868099512,6.45830688678884,7.23665282045051,9.79191907883005,6.63219941196697,5.86673915191293,7.1292936025579,5.63256595892405,6.86775655511445,5.95109102215034,8.78101415360095,10.5615546551148,12.1805579306826,11.0023790373666,7.20998584749247,8.80693407516067,7.08780387049407,13.5712155545345,4.35124547054968,8.35999264132362,8.55403913544671,23.6009367282054,26.8414762296145,7.70494243270374,9.84636616097055,7.88770548540642,4.29482618726302,6.67812532971677,4.06246956519338,7.12955757063661,8.49229592366497,3.64329631507405,6.13737301613755,8.30104333687699,53.6606598424418,7.94864477166304,4.62970569534864,11.0763132360432,10.2281476242972,2.65490276679926,3.39892890616974,2.72091201268276,11.3163047853539,7.38254732201932,8.30074899448604,6.97756391554197,9.81541069589265,7.12994756769443,7.58488219045958,8.4334886859999,7.21948802737308,7.83011093233712,7.20244376125241,2.19909762430683,5.78709994585299,11.1724347194632,7.49149033928696,6.91105886528908,1.522324745573,5.16277757740163,10.1679394014634,8.15955072803359,21.6000991353339,25.5113794179531,16.646367280171,15.9958940964203,13.459553779095,4.08073171281791,30.2243242277131,9.22702756308404,6.3979929068599,8.14855920426731,6.78126445216888,6.97140561377228,8.69357058184786,9.85874893964361,8.11718423477216,9.67399816630967,0.954670618015114,6.48488786841327,7.522820283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| ||
|short_description=p2@Pcmtd1 | |short_description=p2@Pcmtd1 | ||
}} | }} |
Latest revision as of 13:07, 1 October 2015
Short description: | p2@Pcmtd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pcmtd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000061280, ENSMUST00000172291, NM_183028, uc007agb.1, uc007agc.1, uc011why.1_5end |
EntrezGene: | Pcmtd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.37e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.37e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
gray matter | 9.78e-15 | 34 |
regional part of nervous system | 1.25e-13 | 54 |
neural tube | 8.61e-13 | 52 |
neural rod | 8.61e-13 | 52 |
future spinal cord | 8.61e-13 | 52 |
neural keel | 8.61e-13 | 52 |
brain grey matter | 9.88e-13 | 29 |
regional part of telencephalon | 9.88e-13 | 29 |
telencephalon | 9.88e-13 | 29 |
ecto-epithelium | 8.70e-12 | 73 |
brain | 6.67e-11 | 47 |
future brain | 6.67e-11 | 47 |
regional part of brain | 2.33e-10 | 46 |
neurectoderm | 2.41e-10 | 64 |
neural plate | 2.41e-10 | 64 |
presumptive neural plate | 2.41e-10 | 64 |
anterior neural tube | 4.13e-10 | 40 |
cerebral cortex | 6.85e-10 | 21 |
cerebral hemisphere | 6.85e-10 | 21 |
pallium | 6.85e-10 | 21 |
regional part of forebrain | 1.31e-09 | 39 |
forebrain | 1.31e-09 | 39 |
future forebrain | 1.31e-09 | 39 |
ectoderm-derived structure | 1.59e-09 | 95 |
ectoderm | 1.59e-09 | 95 |
presumptive ectoderm | 1.59e-09 | 95 |
central nervous system | 2.80e-09 | 73 |
pre-chordal neural plate | 1.09e-08 | 49 |
nervous system | 1.12e-08 | 75 |
occipital lobe | 5.94e-08 | 10 |
visual cortex | 5.94e-08 | 10 |
neocortex | 5.94e-08 | 10 |
regional part of cerebral cortex | 6.25e-08 | 17 |