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FFCP PHASE1:Mm9::chr1:7078998..7079074,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=319263
|EntrezGene=319263
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P59913,E9QAJ0,Q3TGS5,Q3TSP0,D3Z0C8
|UniProt=P59913,E9QAJ0,Q3TGS5,Q3TSP0,D3Z0C8
|association_with_transcript=0bp_to_ENSMUST00000061280,ENSMUST00000172291,NM_183028,uc007agb.1,uc007agc.1,uc011why.1_5end
|association_with_transcript=0bp_to_ENSMUST00000061280,ENSMUST00000172291,NM_183028,uc007agb.1,uc007agc.1,uc011why.1_5end
|cluster_id=chr1:7078998..7079074,+
|description=CAGE_peak_2_at_Pcmtd1_5end
|description=CAGE_peak_2_at_Pcmtd1_5end
|id=chr1:7078998..7079074,+
|id=chr1:7078998..7079074,+
|ontology_enrichment_celltype=CL:0000117!4.37e-09!23;CL:0000337!4.37e-09!23
|ontology_enrichment_celltype=CL:0000117!4.37e-09!23;CL:0000337!4.37e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.37e-09,23;CL:0000337,4.37e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!3.39e-18!94;UBERON:0007811!2.67e-17!86;UBERON:0002020!9.78e-15!34;UBERON:0001049!8.61e-13!52;UBERON:0005068!8.61e-13!52;UBERON:0006241!8.61e-13!52;UBERON:0007135!8.61e-13!52;UBERON:0002791!9.88e-13!29;UBERON:0003528!9.88e-13!29;UBERON:0001893!9.88e-13!29;UBERON:0000955!3.26e-12!50;UBERON:0006238!3.26e-12!50;UBERON:0002616!1.18e-11!49;UBERON:0000033!3.90e-11!63;UBERON:0003080!4.14e-10!40;UBERON:0000956!6.85e-10!21;UBERON:0001869!6.85e-10!21;UBERON:0000203!6.85e-10!21;UBERON:0002780!1.31e-09!39;UBERON:0001890!1.31e-09!39;UBERON:0006240!1.31e-09!39;UBERON:0001017!2.80e-09!73;UBERON:0005743!2.80e-09!73;UBERON:0003056!1.09e-08!49;UBERON:0000073!1.12e-08!75;UBERON:0001016!1.12e-08!75;UBERON:0002021!5.94e-08!10;UBERON:0000411!5.94e-08!10;UBERON:0001950!5.94e-08!10;UBERON:0002619!6.25e-08!17;UBERON:0002346!7.15e-08!71;UBERON:0003075!7.15e-08!71;UBERON:0007284!7.15e-08!71;UBERON:0000064!7.43e-08!99;UBERON:0004121!1.25e-07!102;UBERON:0000924!1.25e-07!102;UBERON:0006601!1.25e-07!102;UBERON:0000477!3.28e-07!154;UBERON:0000475!8.51e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.78e-15,34;UBERON:0000073,1.25e-13,54;UBERON:0001049,8.61e-13,52;UBERON:0005068,8.61e-13,52;UBERON:0006241,8.61e-13,52;UBERON:0007135,8.61e-13,52;UBERON:0003528,9.88e-13,29;UBERON:0002791,9.88e-13,29;UBERON:0001893,9.88e-13,29;UBERON:0010371,8.70e-12,73;UBERON:0000955,6.67e-11,47;UBERON:0006238,6.67e-11,47;UBERON:0002616,2.33e-10,46;UBERON:0002346,2.41e-10,64;UBERON:0003075,2.41e-10,64;UBERON:0007284,2.41e-10,64;UBERON:0003080,4.13e-10,40;UBERON:0000956,6.85e-10,21;UBERON:0001869,6.85e-10,21;UBERON:0000203,6.85e-10,21;UBERON:0002780,1.31e-09,39;UBERON:0001890,1.31e-09,39;UBERON:0006240,1.31e-09,39;UBERON:0004121,1.59e-09,95;UBERON:0000924,1.59e-09,95;UBERON:0006601,1.59e-09,95;UBERON:0001017,2.80e-09,73;UBERON:0003056,1.09e-08,49;UBERON:0001016,1.12e-08,75;UBERON:0002021,5.94e-08,10;UBERON:0000411,5.94e-08,10;UBERON:0001950,5.94e-08,10;UBERON:0002619,6.25e-08,17
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6934,7.77638453916969,3.76358932826044,6.33251434863915,9.03591120778299,9.4224939526883,5.49687478166462,4.40690909192096,12.4267862617385,4.50954350947352,11.5127740453864,6.9492565991981,5.83353565032143,4.52059382172059,7.09615727061268,12.3225100578042,10.416350787516,11.8491059201053,5.79801889982414,4.89651010638371,35.0772343897278,5.0681303822541,10.9900724166365,16.8897069871134,17.1865627840782,20.8615422520328,17.1879492813555,23.1872557664086,20.496189339474,28.7299661089349,27.6263747274943,31.868727001899,28.5749169671778,41.3744233722754,13.6038230169127,3.55177525398503,2.9605572681127,2.85403847818933,14.2960299583821,9.75948872346146,8.97442958909599,12.4333659865858,10.0314420807073,67.770221114048,62.6042321649761,63.0185064783336,89.8792143657486,71.2485820561468,55.1437545094481,47.9265975164582,58.0914352159244,57.549085940994,62.6489977219702,5.50072942196136,11.1726964552289,12.6342868258059,10.4535888339366,11.738337107167,14.1559501506511,16.2240111295179,10.7138229764225,13.7995260124481,15.4145299175916,13.4344028941827,12.260712190095,13.3907355681932,13.8934580718566,12.7506741081461,11.9073422820768,13.7902347874378,10.9958255664312,14.0109206273124,15.4558866141117,13.0290315906458,12.2458306249943,14.7830437767339,14.5346416632329,16.5632509530982,13.7921810863433,11.1586063452391,12.6273461490165,12.9013908153569,13.4674145197857,16.1343624648877,12.3130602969454,15.1415485972785,16.4233051657124,14.2750892126045,10.4920442733937,10.9947855969342,13.9666185131394,10.9034349279241,5.7353768971074,9.50658126043728
|phase1_expression=9.12848428497326,1.04692622291808,0,2.41971369045464,5.00895729946347,2.85394762250213,1.86890112476421,30.6022276556536,16.1907030474417,24.3427107374873,9.58820622062828,11.0883301003518,29.4465255481674,31.9084468829341,7.32841475994458,8.70643649776252,3.49780939064073,25.3947043113381,29.2053743580224,22.9170411970936,13.6069264241712,8.24114894967348,7.31359409589019,2.3998863419011,3.44113921600755,2.8711598205751,1.29228598847722,1.29282739611533,3.23039813075836,3.78045194639896,1.77384408524244,3.17515336729816,0.61506478758457,15.8481681015439,1.44425809875637,4.3221007793208,1.83752420636132,6.69650609179052,9.37602413428561,7.85285615960697,15.2940186888064,9.56263678941824,7.76816564849846,5.91715044485213,5.87986201073184,7.15832333430558,2.34717403304412,3.92445281484804,2.41654801007919,5.05517737593137,4.61955191363696,1.43752564364972,23.6573474541408,29.0144856804538,35.6259427091012,4.11615097657515,5.15760191889762,5.67239301505187,16.7922662513466,10.0508286061686,14.5781222806421,4.40497891689872,1.77858959222228,1.7997994345628,1.97773272513395,0.7104801149461,1.79760066311043,1.92109152660777,28.7220226094483,21.0609263797437,23.7667206327062,16.5677570954206,18.3320888989839,24.2531782445609,21.2776945660485,26.6573448116906,22.0231761998777,27.7081523644857,26.4203237200739,14.6393779380515,12.7167824607349,13.022834263919,18.9844439320939,19.1339287410771,22.3085441754143,21.2132581541041,26.338760947834,23.6727296198132,4.31639301999149,7.3304413303582,8.40607017234866,5.16254326188832,2.719885334831,4.31762553310254,7.14754059192436,12.0967259516281,8.84799846830037,5.28333999991979,3.89679006904303,4.59341446863442,9.71819596459095,11.5493829672886,5.09610479413291,7.11066703153331,5.41227602528035,4.05375784760158,5.05524445014783,7.87868770061514,25.63485048107,9.20341262201914,3.46970653532272,4.56698217468212,4.15107895060905,4.37095657602605,7.05532242814229,6.03199638382442,5.43828929015623,14.3153363350713,4.42305275974937,7.76480879747564,6.40440403535141,5.81850303762267,9.31958806090611,34.5481340473626,28.6941988334433,4.34276993854605,4.43315960671905,1.19980546198682,3.68503658511888,31.1564529962031,82.3501085073528,53.6544083521931,72.1370928797947,63.1617179605916,28.0513860155406,49.3213439725983,9.16554274652847,10.0769646194175,19.2069296409593,11.3638602178696,5.33493816147085,6.43725892413724,7.38254732201932,9.19299388797862,11.0219128625151,7.55870949680614,8.99536555773397,8.2785078636485,4.095791865724,10.7790465695657,9.85326295318113,10.302199424096,12.7901734643775,15.3230953269753,15.2278780941878,13.335295876839,0.702213187313235,4.37491442095016,3.6941254921427,6.42089894860056,5.62862543954631,6.66229627405755,8.52281048106757,6.68998387941173,5.707883176833,6.97601834251224,6.70683503499048,7.70651259623319,6.58239399653922,8.53670813211295,11.3496333364198,8.91819923294527,7.68425403518677,8.18659154438268,69.8162629232902,43.5286510364373,6.27795687669216,1.85115396664481,4.90562976231038,5.57368012465052,6.57224052742676,6.25218926332362,6.22658522765637,4.94586627892654,3.79623249235609,3.62337700392824,4.02136334080431,5.96869416123452,7.01870713628832,2.69645822596266,3.24207074812041,4.18196673834171,1.51734320762465,7.5404018322421,11.270773567308,5.49858585182348,5.23671715352589,6.94344616914154,9.04282480876879,6.6424566590821,7.69293766422737,5.05928372079382,6.81841042300442,4.33797274861845,5.11053387294328,2.02375901146368,4.86864291332407,5.54707467430559,4.58326533206556,8.0554918486227,6.32327384422638,4.3929826110093,5.75072826109418,6.32639611036456,3.74445207737473,4.79899868099512,6.45830688678884,7.23665282045051,9.79191907883005,6.63219941196697,5.86673915191293,7.1292936025579,5.63256595892405,6.86775655511445,5.95109102215034,8.78101415360095,10.5615546551148,12.1805579306826,11.0023790373666,7.20998584749247,8.80693407516067,7.08780387049407,13.5712155545345,4.35124547054968,8.35999264132362,8.55403913544671,23.6009367282054,26.8414762296145,7.70494243270374,9.84636616097055,7.88770548540642,4.29482618726302,6.67812532971677,4.06246956519338,7.12955757063661,8.49229592366497,3.64329631507405,6.13737301613755,8.30104333687699,53.6606598424418,7.94864477166304,4.62970569534864,11.0763132360432,10.2281476242972,2.65490276679926,3.39892890616974,2.72091201268276,11.3163047853539,7.38254732201932,8.30074899448604,6.97756391554197,9.81541069589265,7.12994756769443,7.58488219045958,8.4334886859999,7.21948802737308,7.83011093233712,7.20244376125241,2.19909762430683,5.78709994585299,11.1724347194632,7.49149033928696,6.91105886528908,1.522324745573,5.16277757740163,10.1679394014634,8.15955072803359,21.6000991353339,25.5113794179531,16.646367280171,15.9958940964203,13.459553779095,4.08073171281791,30.2243242277131,9.22702756308404,6.3979929068599,8.14855920426731,6.78126445216888,6.97140561377228,8.69357058184786,9.85874893964361,8.11718423477216,9.67399816630967,0.954670618015114,6.48488786841327,7.5228202836934,7.77638453916969,3.76358932826044,6.33251434863915,9.03591120778299,9.4224939526883,5.49687478166462,4.40690909192096,12.4267862617385,4.50954350947352,11.5127740453864,6.9492565991981,5.83353565032143,4.52059382172059,7.09615727061268,12.3225100578042,10.416350787516,11.8491059201053,5.79801889982414,4.89651010638371,35.0772343897278,5.0681303822541,10.9900724166365,16.8897069871134,17.1865627840782,20.8615422520328,17.1879492813555,23.1872557664086,20.496189339474,28.7299661089349,27.6263747274943,31.868727001899,28.5749169671778,41.3744233722754,13.6038230169127,3.55177525398503,2.9605572681127,2.85403847818933,14.2960299583821,9.75948872346146,8.97442958909599,12.4333659865858,10.0314420807073,67.770221114048,62.6042321649761,63.0185064783336,89.8792143657486,71.2485820561468,55.1437545094481,47.9265975164582,58.0914352159244,57.549085940994,62.6489977219702,5.50072942196136,11.1726964552289,12.6342868258059,10.4535888339366,11.738337107167,14.1559501506511,16.2240111295179,10.7138229764225,13.7995260124481,15.4145299175916,13.4344028941827,12.260712190095,13.3907355681932,13.8934580718566,12.7506741081461,11.9073422820768,13.7902347874378,10.9958255664312,14.0109206273124,15.4558866141117,13.0290315906458,12.2458306249943,14.7830437767339,14.5346416632329,16.5632509530982,13.7921810863433,11.1586063452391,12.6273461490165,12.9013908153569,13.4674145197857,16.1343624648877,12.3130602969454,15.1415485972785,16.4233051657124,14.2750892126045,10.4920442733937,10.9947855969342,13.9666185131394,10.9034349279241,5.7353768971074,9.50658126043728
|short_description=p2@Pcmtd1
|short_description=p2@Pcmtd1
}}
}}

Latest revision as of 13:07, 1 October 2015

Short description:p2@Pcmtd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pcmtd1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000061280, ENSMUST00000172291, NM_183028, uc007agb.1, uc007agc.1, uc011why.1_5end
EntrezGene:Pcmtd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pcmtd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E930.60
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.19
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F224.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.59
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.09
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E429.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E831.91
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.71
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A225.39
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A429.21
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A622.92
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.44
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C13.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G915.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H29.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.88
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.16
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.06
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A223.66
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.01
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A135.63
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C316.79
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D528.72
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.06
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D923.77
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.28
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F327.71
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.42
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.72
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.21
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F626.34
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E123.67
Mouse Schwann, donor1.CNhs12507.11728-123D94.32
Mouse Schwann, donor2.CNhs12573.11746-123F97.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.10
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.88
accessory axillary lymph node, adult.CNhs10475.1063-29H925.63
adrenal gland, adult.CNhs10508.49-24D79.20
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C17.06
adrenal gland, neonate N25.CNhs11223.1377-27I36.03
amnion, adult pregnant day17.5.CNhs10488.583-22A85.44
aorta, adult.CNhs10498.46-23H114.32
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F57.76
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B234.55
cerebellum, neonate N30.CNhs11135.1395-42I228.69
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.43
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.69
corpora quadrigemina, adult.CNhs10501.16-22A431.16
corpus striatum, adult.CNhs10487.19-21D882.35
corpus striatum, neonate N00.CNhs11226.630-43F153.65
cortex, adult.CNhs10473.12-14D572.14
cortex, neonate N30.CNhs11107.1392-42F263.16
diencephalon, adult.CNhs10482.20-12F228.05
diencephalon, neonate N30.CNhs11201.1388-42B249.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.17
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.08
epididymis, adult.CNhs10490.58-23B219.21
eyeball, adult.CNhs10484.31-12G411.36
eyeball, embryo E12.CNhs11016.345-16C65.33
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C97.38
eyeball, embryo E17.CNhs11023.1261-18D49.19
eyeball, neonate N00.CNhs11207.633-15C611.02
eyeball, neonate N01.CNhs11140.1532-43E77.56
eyeball, neonate N02.CNhs11205.1551-44G89.00
eyeball, neonate N16.CNhs11188.777-19A28.28
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H210.78
forelimb, embryo E13.CNhs10589.384-1E29.85
forelimb, embryo E14.CNhs10577.413-26A810.30
forelimb, embryo E15.CNhs11007.437-20E712.79
forelimb, embryo E17.CNhs10598.1517-43C415.32
forelimb, embryo E18.CNhs11008.1520-43B515.23
gonad, embryo E13.CNhs11044.1564-45I613.34
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.37
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E96.42
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I96.66
heart, embryo E14.CNhs10597.403-26D48.52
heart, embryo E15.CNhs11017.431-16C86.69
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E56.98
heart, embryo E18.CNhs11030.1283-20G36.71
heart, neonate N00.CNhs11213.639-21E37.71
heart, neonate N03.CNhs11221.1349-25I26.58
heart, neonate N10.CNhs11118.749-24G18.54
heart, neonate N16.CNhs11209.782-15G111.35
heart, neonate N20.CNhs11127.821-26I68.92
heart, neonate N25.CNhs11196.1351-25D37.68
heart, neonate N30.CNhs11202.1390-42D28.19
hippocampus, adult.CNhs10478.13-16E869.82
hippocampus, neonate N00.CNhs11228.627-43G143.53
intestinal mucosa, adult.CNhs10506.860-29I36.28
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D55.57
intestine, embryo E15.CNhs10602.976-16D86.57
intestine, embryo E16.CNhs10585.463-22H46.25
intestine, embryo E17.CNhs10582.482-18D36.23
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F25.97
intestine, neonate N10.CNhs11098.755-23A57.02
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F87.54
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C75.24
kidney, neonate N00.CNhs11214.646-21G76.94
kidney, neonate N10.CNhs11206.758-6D59.04
kidney, neonate N20.CNhs11113.832-19I16.64
kidney, neonate N25.CNhs11122.1353-25F37.69
kidney, neonate N30.CNhs11203.1385-42H15.06
liver, adult pregnant day01.CNhs10466.508-5B26.82
liver, embryo E12.CNhs10601.355-15F84.34
liver, embryo E13.CNhs10524.378-3H65.11
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D74.87
liver, embryo E16.CNhs10523.462-17F55.55
liver, embryo E17.CNhs10510.481-18A34.58
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F46.32
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H16.46
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B19.79
lung, embryo E12.CNhs10522.354-16G26.63
lung, embryo E14.CNhs10604.404-26F85.87
lung, embryo E15.CNhs11020.432-17C57.13
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A66.87
lung, embryo E18.CNhs10583.1287-20I65.95
lung, neonate N00.CNhs11224.640-42C68.78
lung, neonate N06.CNhs11212.683-20E510.56
lung, neonate N07.CNhs11111.715-19A312.18
lung, neonate N10.CNhs11219.750-23E611.00
lung, neonate N20.CNhs11109.822-18A47.21
lung, neonate N25.CNhs11119.1359-25C78.81
lung, neonate N30.CNhs11133.1394-42H27.09
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H28.55
medulla oblongata, adult.CNhs10477.17-12C223.60
medulla oblongata, neonate N30.CNhs11200.1396-42A326.84
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.70
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.85
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.49
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.14
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I953.66
ovary, adult.CNhs10507.91-2I77.95
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I411.08
oviduct, adult pregnant day01.CNhs10500.988-6G610.23
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E511.32
pancreas, embryo E17.CNhs10599.1558-45G37.38
pancreas, embryo E18.CNhs10580.1535-43I78.30
pancreas, neonate N00.CNhs11105.645-26G96.98
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B67.58
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E67.20
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B911.17
pituitary gland, embryo E16.CNhs11036.449-43F67.49
pituitary gland, embryo E17.CNhs11039.1265-44F56.91
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G310.17
prostate, adult.CNhs10470.859-1F88.16
skin, adult.CNhs10492.30-1C321.60
skin, neonate N00.CNhs11124.650-25G425.51
skin, neonate N03.CNhs11215.662-22H316.65
skin, neonate N06.CNhs11097.693-20I516.00
skin, neonate N10.CNhs11108.762-6C413.46
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C930.22
spleen, adult.CNhs10465.25-2G29.23
spleen, embryo E16.CNhs11035.461-43C16.40
spleen, embryo E18.CNhs11011.1271-21F28.15
spleen, neonate N10.CNhs11116.752-24D16.78
spleen, neonate N20.CNhs11112.824-19H16.97
spleen, neonate N25.CNhs11099.1354-25G38.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.67
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E36.48
stomach, embryo E15.CNhs10603.1252-16G87.52
stomach, embryo E16.CNhs11022.459-17D47.78
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B89.04
stomach, neonate N07.CNhs11210.718-18A99.42
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I14.41
submandibular gland, adult.CNhs10469.59-29C112.43
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F511.51
testis, embryo E15.CNhs11034.443-27C56.95
testis, embryo E16.CNhs11033.470-26G55.83
testis, embryo E17.CNhs11029.486-18I54.52
testis, embryo E18.CNhs11027.503-18G57.10
testis, neonate N00.CNhs11189.1300-22B712.32
testis, neonate N07.CNhs11222.726-26I410.42
testis, neonate N10.CNhs11204.763-44D911.85
testis, neonate N20.CNhs11110.839-18H35.80
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B535.08
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I210.99
thymus, embryo E16.CNhs11002.456-26C516.89
thymus, embryo E17.CNhs10581.478-18C117.19
thymus, embryo E18.CNhs10595.1273-19G420.86
thymus, neonate N02.CNhs11181.1541-43F817.19
thymus, neonate N03.CNhs11137.2104-43C723.19
thymus, neonate N06.CNhs11197.681-26C420.50
thymus, neonate N07.CNhs11211.713-19D328.73
thymus, neonate N10.CNhs11194.748-24E427.63
thymus, neonate N20.CNhs11186.820-7A231.87
thymus, neonate N25.CNhs11125.1362-25G728.57
thymus, neonate N30.CNhs11132.1393-42G241.37
tongue, adult.CNhs10499.32-1B413.60
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E414.30
uterus, adult pregnant day19.CNhs10497.590-15F59.76
uterus, adult.CNhs10509.92-27E58.97
vagina, adult.CNhs10502.89-27D512.43
vesicular gland, adult.CNhs10491.51-27F810.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A167.77
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A262.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A363.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D789.88
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A471.25
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A555.14
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A647.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A758.09
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A857.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A962.65
whole body, embryo E11.CNhs11014.324-5I85.50
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H212.63
whole body, embryo E14.5.CNhs10578.420-27D210.45
whole body, embryo E14.CNhs10519.395-14B111.74
whole body, embryo E16.CNhs10514.453-14F214.16
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.41
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.43
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.46
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.25
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.53
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.13
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.31
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.42
whole body, embryo E17.5.CNhs10513.490-9F914.28
whole body, embryo E17.CNhs10517.475-3I510.49
whole body, embryo E18.CNhs10516.493-3B310.99
whole body, neonate N00.CNhs10525.657-19C213.97
whole body, neonate N01.CNhs10576.659-23C610.90
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B49.51





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.37e-0923
neuroblast (sensu Vertebrata)4.37e-0923

Uber anatomy
Ontology termp-valuen
gray matter9.78e-1534
regional part of nervous system1.25e-1354
neural tube8.61e-1352
neural rod8.61e-1352
future spinal cord8.61e-1352
neural keel8.61e-1352
brain grey matter9.88e-1329
regional part of telencephalon9.88e-1329
telencephalon9.88e-1329
ecto-epithelium8.70e-1273
brain6.67e-1147
future brain6.67e-1147
regional part of brain2.33e-1046
neurectoderm2.41e-1064
neural plate2.41e-1064
presumptive neural plate2.41e-1064
anterior neural tube4.13e-1040
cerebral cortex6.85e-1021
cerebral hemisphere6.85e-1021
pallium6.85e-1021
regional part of forebrain1.31e-0939
forebrain1.31e-0939
future forebrain1.31e-0939
ectoderm-derived structure1.59e-0995
ectoderm1.59e-0995
presumptive ectoderm1.59e-0995
central nervous system2.80e-0973
pre-chordal neural plate1.09e-0849
nervous system1.12e-0875
occipital lobe5.94e-0810
visual cortex5.94e-0810
neocortex5.94e-0810
regional part of cerebral cortex6.25e-0817
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