Personal tools

FFCP PHASE1:Mm9::chr1:72871120..72871131,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr1:72871120..72871131,+
|DHSsupport=NA
|short_description=p2@Igfbp2
|DPIdataset=NA
|description=CAGE_peak_2_at_Igfbp2_5end
|association_with_transcript=-9bp_to_ENSMUST00000080287_5end
|EntrezGene=16008
|EntrezGene=16008
|HGNC=
|HGNC=
|MCL_coexpression_id=427
|TSSclassifier=NA
|UniProt=E9Q9K3
|UniProt=E9Q9K3
|association_with_transcript=-9bp_to_ENSMUST00000080287_5end
|cluster_id=chr1:72871120..72871131,+
|description=CAGE_peak_2_at_Igfbp2_5end
|id=chr1:72871120..72871131,+
|ontology_enrichment_celltype=CL:0002453!6.60e-07!8
|ontology_enrichment_celltype_v019_2=CL:0002453,3.84e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!4.33e-13!63;UBERON:0004111!6.24e-13!122;UBERON:0000025!5.48e-11!114;UBERON:0004121!8.39e-11!102;UBERON:0000924!8.39e-11!102;UBERON:0006601!8.39e-11!102;UBERON:0002346!1.13e-10!71;UBERON:0003075!1.13e-10!71;UBERON:0007284!1.13e-10!71;UBERON:0001049!1.16e-10!52;UBERON:0005068!1.16e-10!52;UBERON:0006241!1.16e-10!52;UBERON:0007135!1.16e-10!52;UBERON:0003056!1.62e-10!49;UBERON:0001017!2.94e-10!73;UBERON:0005743!2.94e-10!73;UBERON:0000073!3.51e-09!75;UBERON:0001016!3.51e-09!75;UBERON:0000955!3.92e-09!50;UBERON:0006238!3.92e-09!50;UBERON:0002616!8.45e-09!49;UBERON:0002780!8.78e-08!39;UBERON:0001890!8.78e-08!39;UBERON:0006240!8.78e-08!39;UBERON:0003080!9.91e-08!40;UBERON:0000468!1.32e-07!333;UBERON:0002020!5.68e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.76e-12,64;UBERON:0003075,2.76e-12,64;UBERON:0007284,2.76e-12,64;UBERON:0004121,6.10e-12,95;UBERON:0000924,6.10e-12,95;UBERON:0006601,6.10e-12,95;UBERON:0010371,6.19e-12,73;UBERON:0004111,1.44e-11,122;UBERON:0001049,4.64e-11,52;UBERON:0005068,4.64e-11,52;UBERON:0006241,4.64e-11,52;UBERON:0007135,4.64e-11,52;UBERON:0000073,5.75e-11,54;UBERON:0003056,6.56e-11,49;UBERON:0001017,3.84e-10,73;UBERON:0000025,1.12e-09,114;UBERON:0000955,1.33e-09,47;UBERON:0006238,1.33e-09,47;UBERON:0002616,3.00e-09,46;UBERON:0001016,3.20e-09,75;UBERON:0002780,4.68e-08,39;UBERON:0001890,4.68e-08,39;UBERON:0006240,4.68e-08,39;UBERON:0003080,5.31e-08,40;UBERON:0002020,3.28e-07,34
|phase1_expression=35.7131929043691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,457.698936443603,158.504288688585,554.268239039072,523.210858408897,47.3154105093725,172.503077237966,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,8.49729135610311,9.52183762689659,12.0427966666174,19.3141383279405,27.5681386794453,0,0.988866362566974,0,59.6204219931625,117.186583123074,6.42875596312561,7.83034442323806,6.30974884054146,24.2803336743233,20.7616428494517,5.63457676388789,4.40889166683887,5.51531271966013,3.30347642998166,4.46905683298157,3.07213066512487,6.4624280987795,6.12967212136145,10.4182674111352,8.37548997004143,4.50210088025344,6.26472815884921,10.9012576625257,10.6778760599327,5.96478226640962,0,0,0,52.4858564958646,38.078394687634,29.6836755400799,51.3323369783659,51.5230920161936,7.16266542671934,0,0,0,3.38024207464033,0,0,0,0,0,0,11.8751234907822,0,0.29688427812965,1.90833859442749,1.82679286987285,2.53677046981664,1.05505848386836,2.3517741427141,0.628332956648377,1.23597483867187,0.433798070759735,0,3.07357014900077,0.662524555381181,0,3.72783522436244,4.68449275218475,2.93225389538837,0,0,0,0,3.59497534571574,1.83000241127451,5.40313714085317,2.9550134432687,6.39288643325826,3.94797284663164,2.59586020908412,23.2193749578721,0.497627882440372,1.0108910337347,4.20883711772948,6.76626303406059,18.6220704591113,14.4049703844279,9.49440352365005,12.654788842147,10.1209839025031,11.2442069471675,12.1590584247337,5.6047678162539,4.72765200419548,5.63043597324636,7.23345917010997,7.50727572909114,5.2237824978325,5.14455341019859,4.17971960318836,0,0,0,1.86413195281952,4.22146907965973,2.88099298337624,4.49814997611899,0.983821158737019,0.617068451549513,1.16266972375204,0.804820204198858,0.700592054203017,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,9.88362758251398,12.657267322652,0,0,9.59797127408553,6.50262681209228,2.70621668776396,1.81515172161008,0.667134131534611,1.52180500890047,0.474529061544512,2.63518327558417,1.75934646160189,2.98434708061726,1.75467678407208,0.898819408654221,0.432276099749388,0.796565093017469,6.63837653335786,2.62771579002376,0,2.24016460629846,3.49114476901726,3.50679099451593,1.45444035385792,1.03327103585722,0,0.246794327843601,45.6537045714209,0.667380422864376,0.786235980452812,0.224862112384854,0.202860121388503,0,2.80088436959562,6.61701116136864,38.2639135189084,52.7157913321116,30.1913233707445,71.0789210046841,69.8964387776616,54.5570376365761,30.3181628852032,79.1207375035922,18.4753190166605,7.20067364727842,5.70377417547091,7.29903868833309,6.80601720036656,3.68513766371995,1.19021820443007,1.75620283072019,10.0886492227962,12.4020226203314,16.2643864030637,9.5040722535128,11.9152637487468,18.0811323226889,0,0,2.45882136509518,3.03530420935206,5.29816946959713,4.80567915028033,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,10.2822821254978,2.12910127812403,14.9575107080494,12.0536349921646,0.659880491890142,0,4.61283208694465,3.32555912661226,2.26326095707078,1.47650946440386,2.15204603560749,2.32585463851399,1.81766864738753,2.13898427030833,0.632073515871632,0,1.03135543248187,1.36175842301515,12.9643987702543,27.424040961944,18.8616590827801,14.1872186913819,23.7230527410754,22.2141177812863,23.1393361327095,0.469343416127421,9.32061111800809,4.6310963591542,0.49465875882444,2.58343082713449,2.65376869683886,5.72987251215055,4.26766339337159,0,3.52308073819968,0.170870880797853,2.88941615148511,0.925972636848558,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,9.54670618015114,8.22473583310952,9.75933442208874,11.9885928312199,14.4270924249983,12.8833912610245,15.2396711414847,17.5225326137712,16.4906243449939,1.16653475962614,8.69875038321696,1.69107881605257,2.39226473670366,2.81279433777066,1.75006069509643,4.64975364519832,1.01373675294467,1.5256441023948,7.03103678157331,2.62148361064277,1.20792060413003,2.30424005006292,0.948033361884535,4.25722952109345,2.77319584345034,0.51968329191118,0.358053391334963,0.596044064343795,0,0.147689527174577,0.100966449948148,0.304827226619999,0.201652370273681,0.584747284438515,0.288635524920988,0.116876902181569,8.84248496099324,3.10780334723691,0.269141569828427,0.167884616364078,58.3432573977215,30.5922434985427,0,7.28852488868824,3.00943262421218,7.90652579663893,8.74617949363636,5.15605962095457,4.98374228796694,4.7955776383945,6.0431511791176,8.10027000278167,2.70192721934532,3.62513927187364,1.03552062350364,2.17953429926771,5.58634822761443,7.17081144167364,4.61902762429759,2.72497111416377,2.38996560985018,7.11189528965169,5.15087643097235,5.77654577265267,7.58091635291392,5.32306529769503,4.33840585187975,5.52484894072306,6.01836432605771,3.84817642002609,5.71552429539688,5.67833197129792,4.82273051159263,6.59337441285291,6.32955356577908,4.4573002810104,4.61437096014278,5.00715998889374,4.79643174886684,4.51725025993587,4.65380343404221,4.39027134894654,4.73525480588117,4.20992752922171,6.17256498823512,6.76219603307793,6.69830480153832,4.09231043169689,4.33823155320705,6.75173138433995,16.2376875659665,5.6143586026898,9.66919743217342,5.16478496585877,5.29419405886837,0.927471342481686
|phase1_expression=35.7131929043691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,457.698936443603,158.504288688585,554.268239039072,523.210858408897,47.3154105093725,172.503077237966,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,8.49729135610311,9.52183762689659,12.0427966666174,19.3141383279405,27.5681386794453,0,0.988866362566974,0,59.6204219931625,117.186583123074,6.42875596312561,7.83034442323806,6.30974884054146,24.2803336743233,20.7616428494517,5.63457676388789,4.40889166683887,5.51531271966013,3.30347642998166,4.46905683298157,3.07213066512487,6.4624280987795,6.12967212136145,10.4182674111352,8.37548997004143,4.50210088025344,6.26472815884921,10.9012576625257,10.6778760599327,5.96478226640962,0,0,0,52.4858564958646,38.078394687634,29.6836755400799,51.3323369783659,51.5230920161936,7.16266542671934,0,0,0,3.38024207464033,0,0,0,0,0,0,11.8751234907822,0,0.29688427812965,1.90833859442749,1.82679286987285,2.53677046981664,1.05505848386836,2.3517741427141,0.628332956648377,1.23597483867187,0.433798070759735,0,3.07357014900077,0.662524555381181,0,3.72783522436244,4.68449275218475,2.93225389538837,0,0,0,0,3.59497534571574,1.83000241127451,5.40313714085317,2.9550134432687,6.39288643325826,3.94797284663164,2.59586020908412,23.2193749578721,0.497627882440372,1.0108910337347,4.20883711772948,6.76626303406059,18.6220704591113,14.4049703844279,9.49440352365005,12.654788842147,10.1209839025031,11.2442069471675,12.1590584247337,5.6047678162539,4.72765200419548,5.63043597324636,7.23345917010997,7.50727572909114,5.2237824978325,5.14455341019859,4.17971960318836,0,0,0,1.86413195281952,4.22146907965973,2.88099298337624,4.49814997611899,0.983821158737019,0.617068451549513,1.16266972375204,0.804820204198858,0.700592054203017,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,9.88362758251398,12.657267322652,0,0,9.59797127408553,6.50262681209228,2.70621668776396,1.81515172161008,0.667134131534611,1.52180500890047,0.474529061544512,2.63518327558417,1.75934646160189,2.98434708061726,1.75467678407208,0.898819408654221,0.432276099749388,0.796565093017469,6.63837653335786,2.62771579002376,0,2.24016460629846,3.49114476901726,3.50679099451593,1.45444035385792,1.03327103585722,0,0.246794327843601,45.6537045714209,0.667380422864376,0.786235980452812,0.224862112384854,0.202860121388503,0,2.80088436959562,6.61701116136864,38.2639135189084,52.7157913321116,30.1913233707445,71.0789210046841,69.8964387776616,54.5570376365761,30.3181628852032,79.1207375035922,18.4753190166605,7.20067364727842,5.70377417547091,7.29903868833309,6.80601720036656,3.68513766371995,1.19021820443007,1.75620283072019,10.0886492227962,12.4020226203314,16.2643864030637,9.5040722535128,11.9152637487468,18.0811323226889,0,0,2.45882136509518,3.03530420935206,5.29816946959713,4.80567915028033,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,10.2822821254978,2.12910127812403,14.9575107080494,12.0536349921646,0.659880491890142,0,4.61283208694465,3.32555912661226,2.26326095707078,1.47650946440386,2.15204603560749,2.32585463851399,1.81766864738753,2.13898427030833,0.632073515871632,0,1.03135543248187,1.36175842301515,12.9643987702543,27.424040961944,18.8616590827801,14.1872186913819,23.7230527410754,22.2141177812863,23.1393361327095,0.469343416127421,9.32061111800809,4.6310963591542,0.49465875882444,2.58343082713449,2.65376869683886,5.72987251215055,4.26766339337159,0,3.52308073819968,0.170870880797853,2.88941615148511,0.925972636848558,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,9.54670618015114,8.22473583310952,9.75933442208874,11.9885928312199,14.4270924249983,12.8833912610245,15.2396711414847,17.5225326137712,16.4906243449939,1.16653475962614,8.69875038321696,1.69107881605257,2.39226473670366,2.81279433777066,1.75006069509643,4.64975364519832,1.01373675294467,1.5256441023948,7.03103678157331,2.62148361064277,1.20792060413003,2.30424005006292,0.948033361884535,4.25722952109345,2.77319584345034,0.51968329191118,0.358053391334963,0.596044064343795,0,0.147689527174577,0.100966449948148,0.304827226619999,0.201652370273681,0.584747284438515,0.288635524920988,0.116876902181569,8.84248496099324,3.10780334723691,0.269141569828427,0.167884616364078,58.3432573977215,30.5922434985427,0,7.28852488868824,3.00943262421218,7.90652579663893,8.74617949363636,5.15605962095457,4.98374228796694,4.7955776383945,6.0431511791176,8.10027000278167,2.70192721934532,3.62513927187364,1.03552062350364,2.17953429926771,5.58634822761443,7.17081144167364,4.61902762429759,2.72497111416377,2.38996560985018,7.11189528965169,5.15087643097235,5.77654577265267,7.58091635291392,5.32306529769503,4.33840585187975,5.52484894072306,6.01836432605771,3.84817642002609,5.71552429539688,5.67833197129792,4.82273051159263,6.59337441285291,6.32955356577908,4.4573002810104,4.61437096014278,5.00715998889374,4.79643174886684,4.51725025993587,4.65380343404221,4.39027134894654,4.73525480588117,4.20992752922171,6.17256498823512,6.76219603307793,6.69830480153832,4.09231043169689,4.33823155320705,6.75173138433995,16.2376875659665,5.6143586026898,9.66919743217342,5.16478496585877,5.29419405886837,0.927471342481686
|short_description=p2@Igfbp2
}}
}}

Latest revision as of 13:43, 1 October 2015

Short description:p2@Igfbp2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Igfbp2_5end
Coexpression cluster:MCL_coexpression_mm9:427
Association with transcript: -9bp_to_ENSMUST00000080287_5end
EntrezGene:Igfbp2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Igfbp2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G735.71
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7457.70
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2158.50
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8554.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3523.21
Mouse Astrocytes, donor2.CNhs12078.11552-120C447.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C4172.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C619.31
Mouse Meningeal cells, donor3.CNhs12109.11639-122D127.57
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C859.62
Mouse Microglia, donor2.CNhs12634.11736-123E8117.19
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.43
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F124.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.76
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.41
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.13
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F752.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C438.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C829.68
Mouse hepatocyte, donor6.CNhs13090.11822-124F451.33
Mouse hepatocyte, donor8.CNhs13091.11824-124F651.52
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.88
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.07
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F15.40
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B123.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C66.77
eyeball, embryo E14.CNhs10521.399-16E218.62
eyeball, embryo E15.CNhs10593.426-16C914.40
eyeball, embryo E17.CNhs11023.1261-18D49.49
eyeball, neonate N00.CNhs11207.633-15C612.65
eyeball, neonate N01.CNhs11140.1532-43E710.12
eyeball, neonate N02.CNhs11205.1551-44G811.24
eyeball, neonate N16.CNhs11188.777-19A212.16
forelimb, embryo E11.CNhs10596.335-25E25.60
forelimb, embryo E12.CNhs10600.359-14H24.73
forelimb, embryo E13.CNhs10589.384-1E25.63
forelimb, embryo E14.CNhs10577.413-26A87.23
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E89.88
hippocampus, neonate N00.CNhs11228.627-43G112.66
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I59.60
intestine, embryo E13.CNhs11010.381-16D56.50
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I96.64
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G73.51
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B245.65
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G46.62
liver, neonate N00.CNhs11117.641-24F438.26
liver, neonate N03.CNhs11123.1345-25G252.72
liver, neonate N06.CNhs11101.684-20A830.19
liver, neonate N07.CNhs11103.716-20H271.08
liver, neonate N10.CNhs11115.751-24B969.90
liver, neonate N20.CNhs11220.823-25A354.56
liver, neonate N25.CNhs11198.1368-26H130.32
liver, neonate N30.CNhs11106.1382-42D179.12
lung, adult.CNhs10474.28-22B118.48
lung, embryo E12.CNhs10522.354-16G27.20
lung, embryo E14.CNhs10604.404-26F85.70
lung, embryo E15.CNhs11020.432-17C57.30
lung, embryo E16.CNhs10998.458-17B66.81
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E510.09
lung, neonate N07.CNhs11111.715-19A312.40
lung, neonate N10.CNhs11219.750-23E616.26
lung, neonate N20.CNhs11109.822-18A49.50
lung, neonate N25.CNhs11119.1359-25C711.92
lung, neonate N30.CNhs11133.1394-42H218.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A34.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H714.96
ovary, neonate N00.CNhs11217.1299-22I412.05
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E612.96
pituitary gland, embryo E13.CNhs11009.370-44C727.42
pituitary gland, embryo E14.CNhs11037.398-44A518.86
pituitary gland, embryo E15.CNhs10592.427-16B914.19
pituitary gland, embryo E16.CNhs11036.449-43F623.72
pituitary gland, embryo E17.CNhs11039.1265-44F522.21
pituitary gland, neonate N00.CNhs11190.1308-22E923.14
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G39.32
prostate, adult.CNhs10470.859-1F84.63
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.65
skin, neonate N06.CNhs11097.693-20I55.73
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E38.22
stomach, embryo E15.CNhs10603.1252-16G89.76
stomach, embryo E16.CNhs11022.459-17D411.99
stomach, embryo E17.CNhs11006.1035-18D514.43
stomach, embryo E18.CNhs10999.1286-20C612.88
stomach, neonate N03.CNhs11193.1340-24B815.24
stomach, neonate N07.CNhs11210.718-18A917.52
stomach, neonate N25.CNhs11104.1355-25E416.49
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C18.70
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F52.39
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I54.65
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I47.03
testis, neonate N10.CNhs11204.763-44D92.62
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I22.77
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B48.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E458.34
uterus, adult pregnant day19.CNhs10497.590-15F530.59
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D57.29
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H27.17
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.76
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.70
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F96.75
whole body, embryo E17.CNhs10517.475-3I516.24
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C29.67
whole body, neonate N01.CNhs10576.659-23C65.16
whole body, neonate N06.CNhs10515.692-21D15.29
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
oligodendrocyte precursor cell3.84e-078

Uber anatomy
Ontology termp-valuen
neurectoderm2.76e-1264
neural plate2.76e-1264
presumptive neural plate2.76e-1264
ectoderm-derived structure6.10e-1295
ectoderm6.10e-1295
presumptive ectoderm6.10e-1295
ecto-epithelium6.19e-1273
anatomical conduit1.44e-11122
neural tube4.64e-1152
neural rod4.64e-1152
future spinal cord4.64e-1152
neural keel4.64e-1152
regional part of nervous system5.75e-1154
pre-chordal neural plate6.56e-1149
central nervous system3.84e-1073
tube1.12e-09114
brain1.33e-0947
future brain1.33e-0947
regional part of brain3.00e-0946
nervous system3.20e-0975
regional part of forebrain4.68e-0839
forebrain4.68e-0839
future forebrain4.68e-0839
anterior neural tube5.31e-0840
gray matter3.28e-0734
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:72871120..72871131,%2B&oldid=4305662"