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FFCP PHASE1:Mm9::chr5:107788562..107788605,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:107788562..107788605,+
|DHSsupport=NA
|short_description=p2@Brdt
|DPIdataset=NA
|description=CAGE_peak_2_at_Brdt_5end
|association_with_transcript=-185bp_to_uc008ymd.1_5end
|EntrezGene=114642
|EntrezGene=114642
|HGNC=
|HGNC=
|MCL_coexpression_id=848
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-185bp_to_uc008ymd.1_5end
|cluster_id=chr5:107788562..107788605,+
|description=CAGE_peak_2_at_Brdt_5end
|id=chr5:107788562..107788605,+
|ontology_enrichment_celltype=CL:0000117!3.79e-10!23;CL:0000337!3.79e-10!23;CL:0000540!1.10e-07!33;CL:0000047!1.10e-07!33;CL:0000031!1.10e-07!33;CL:0000404!1.10e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.29e-10,23;CL:0000337,1.29e-10,23;CL:0000540,1.36e-07,33;CL:0000047,1.36e-07,33;CL:0000031,1.36e-07,33;CL:0000404,1.36e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!1.41e-18!86;UBERON:0000153!2.09e-18!94;UBERON:0001017!1.71e-17!73;UBERON:0005743!1.71e-17!73;UBERON:0002346!2.17e-17!71;UBERON:0003075!2.17e-17!71;UBERON:0007284!2.17e-17!71;UBERON:0001049!6.88e-17!52;UBERON:0005068!6.88e-17!52;UBERON:0006241!6.88e-17!52;UBERON:0007135!6.88e-17!52;UBERON:0000073!2.15e-16!75;UBERON:0001016!2.15e-16!75;UBERON:0000955!5.23e-16!50;UBERON:0006238!5.23e-16!50;UBERON:0002616!1.19e-15!49;UBERON:0000033!1.53e-15!63;UBERON:0004121!2.38e-15!102;UBERON:0000924!2.38e-15!102;UBERON:0006601!2.38e-15!102;UBERON:0002020!1.08e-14!34;UBERON:0003056!7.62e-14!49;UBERON:0003080!6.15e-13!40;UBERON:0002780!2.20e-12!39;UBERON:0001890!2.20e-12!39;UBERON:0006240!2.20e-12!39;UBERON:0002791!4.11e-12!29;UBERON:0003528!4.11e-12!29;UBERON:0001893!4.11e-12!29;UBERON:0000956!8.71e-09!21;UBERON:0001869!8.71e-09!21;UBERON:0000203!8.71e-09!21;UBERON:0002021!2.13e-07!10;UBERON:0000411!2.13e-07!10;UBERON:0001950!2.13e-07!10;UBERON:0000475!2.74e-07!200;UBERON:0002619!4.45e-07!17;UBERON:0000468!5.64e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.32e-19,54;UBERON:0001049,2.58e-17,52;UBERON:0005068,2.58e-17,52;UBERON:0006241,2.58e-17,52;UBERON:0007135,2.58e-17,52;UBERON:0001017,2.95e-17,73;UBERON:0002346,1.05e-16,64;UBERON:0003075,1.05e-16,64;UBERON:0007284,1.05e-16,64;UBERON:0001016,6.40e-16,75;UBERON:0002020,4.52e-15,34;UBERON:0010371,1.95e-14,73;UBERON:0000955,2.20e-14,47;UBERON:0006238,2.20e-14,47;UBERON:0003056,3.10e-14,49;UBERON:0002616,5.12e-14,46;UBERON:0004121,1.41e-13,95;UBERON:0000924,1.41e-13,95;UBERON:0006601,1.41e-13,95;UBERON:0003080,2.90e-13,40;UBERON:0002780,1.10e-12,39;UBERON:0001890,1.10e-12,39;UBERON:0006240,1.10e-12,39;UBERON:0003528,2.32e-12,29;UBERON:0002791,2.32e-12,29;UBERON:0001893,2.32e-12,29;UBERON:0010314,6.47e-12,92;UBERON:0000956,7.26e-09,21;UBERON:0001869,7.26e-09,21;UBERON:0000203,7.26e-09,21;UBERON:0002021,1.02e-07,10;UBERON:0000411,1.02e-07,10;UBERON:0001950,1.02e-07,10;UBERON:0002619,4.48e-07,17
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|phase1_expression=3.36312578920067,0,0.454999239389536,0.30246421130683,0.500895729946347,0.16787927191189,0,1.42035655785734,0.281577444303333,0.468129052643987,0,0.239316476986009,3.93761678841773,4.28359971853087,0,0,0,1.89277299214943,1.23402990245165,0.84877930359606,1.9559956734746,0,0.261199789138935,0.159992422793407,0,0,0.430761996159075,0,0,0.252030129759931,0.443461021310609,0,0,0,0.866554859253824,0,0.204169356262369,0,0,0,0,0,0,1.38486499773135,1.4192770370732,0.917733760808408,0.782391344348039,0.218025156380447,0.659058548203415,0.58328969722285,1.25987779462826,2.87505128729943,0.671130424230945,4.35217285206807,4.03312558970957,1.54355661621568,2.29226751951005,0.515672092277442,3.23706337375356,4.7609188134483,1.26766280701236,0.338844532069132,1.77858959222228,0,0.988866362566974,0,0.898800331555214,3.07374644257244,4.45865332926454,4.72520784160917,4.20649922702764,7.9982275633065,5.52171352379034,2.9397791811589,2.77951865952885,2.75765635983006,12.1127469099328,10.0872997087298,9.67721159514334,3.03338461779446,2.92760459527711,4.68822033501084,7.2587579740359,6.75315132038016,9.32069311438542,5.59794312399969,9.681274294339,4.47358669980721,0.302904773332736,0.906858721281426,0.869593466105033,0,0,2.15881276655127,0,4.48026887097336,0.280888840263504,0.340860645156116,0.259786004602869,0.35333957451034,0.985903938436763,1.28326477414318,0,7.11066703153331,0.216491041011214,0,0,0.5709193985953,0,1.92974780784272,1.38788261412909,2.13125834818499,2.07553947530453,2.41156224884196,4.23319345688537,2.01066546127481,0.741584903203122,0.433798070759735,0.884610551949874,2.42650274921114,1.32504911076236,1.45462575940567,1.86391761218122,7.61230072230023,10.2628886338593,0.766371165625774,0.239630249011841,0.599902730993408,0.381210681219194,8.53806644607489,5.03250663100489,4.02093926761166,8.34356736922927,9.97290283588289,8.10373373782284,7.30085683804909,2.85150218780886,1.49288364732112,0.252722758433675,1.26265113531884,1.69156575851515,2.5289231487682,1.98068342785884,2.86339153887859,3.26575195926374,3.84341160854549,3.09215691047105,1.81092359517311,0.862271971731369,1.13463648100692,2.46331573829528,2.19195732427575,2.78047249225598,5.57203466435466,2.46938563689532,0.59710280045548,0,0,0.568326998791185,0.828503090142008,0.469052119962192,0.540186184383045,1.18372367792605,1.18058539048442,1.23413690309903,1.86027155800326,0.268273401399619,1.86824547787471,1.6455984991348,1.31333971263276,1.13496333364198,0.877199924551994,1.3173006917463,1.34206418760372,8.83217783969334,6.68879980465349,0,0,0.426576501070468,1.16118335930219,1.67527699718721,0.403367049246685,0.444756087689741,0.570676878337677,0.949058123089023,1.31759163779209,2.01068167040216,1.39269530428806,2.14460495831032,0,0.864552199498777,1.1948476395262,0.758671603812327,1.02823661348756,0,1.62921062276251,1.16371492300575,2.17421041659988,1.89709611372772,0.738050739898011,1.41298855057237,1.97435462274881,1.77871576252289,0.500535317148282,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0.575392274901621,1.13494658742525,0.823684239564244,2.87536413054709,2.23284568601102,0.312037673114561,1.51547326768267,0.717589654087649,2.8946611281802,0.923765950833023,0.37898282354097,0.814824882210129,1.18821560042632,1.87752198630802,3.01511263395268,2.85652369063216,2.14647012643579,4.57141917907954,1.99318220683897,2.23236676120482,1.47476983244164,1.72684981865896,1.3018415272336,0,0,0.491764273019036,1.10374698521893,8.99083303931635,8.32202974804643,1.80328439914343,1.26235463602186,0.94652465824877,0.780877488593277,1.50796378412959,1.19484398976276,1.55959071857676,1.13230612315533,2.02405350837447,1.46127928955656,1.18586333383957,3.53453448063988,1.70328102249922,0.890328018336276,3.90928702448583,2.8044920905331,0,0.485561272309963,0.302323556964751,0.565815239267694,0.295301892880773,1.84461088766356,1.29214146584111,1.45413491791002,1.06949213515416,1.58018378967908,1.05418608574999,0,4.08527526904546,1.08036656418786,1.29358683782755,1.92903331528433,2.30542303734956,1.60531935841864,1.97458824722545,1.8267896946876,0.23467170806371,0.42366414172764,0.661585194164886,1.15420377059036,3.55221738730992,1.74907482291652,1.07435109602823,0.328281799490123,0.582961673259701,8.15871328846243,0.170870880797853,1.857481811669,0.925972636848558,0.941842285023455,0.820165366326151,0.457556346413045,0.679913719975421,0.69975726161829,1.10559979043539,0.954670618015114,0.474503990371703,0.813277868507395,0.86404272657441,1.25452977608681,1.31017538247707,1.88810084938749,1.57041565878138,1.57053565190418,1.68499465279331,0,2.25477175473676,1.19613236835183,0.992750942742586,2.52786544847262,2.45403664607689,1.85851738039856,4.22486059124714,1.3020438484395,2.30690557736564,1.20792060413003,2.88030006257865,6.00421129193539,1.01362607645082,1.54066435747241,2.33857481360031,4.47566739168704,5.36439657909415,5.16840432935866,5.61220203263393,7.06765149637033,9.52585083187498,8.67105192176829,9.64833019323549,10.7757262637169,13.557720653062,0.906921534460845,0.443971906748129,0.0897138566094757,0.671538465456314,0.965947970160952,1.50145980360946,1.09890974560359,0,0.501572104035363,11.2950368523413,8.74617949363636,9.16632821503035,5.32744865265431,8.90607275701835,9.06472676867641,8.77529250301348,13.0593148935024,6.79713613476307,14.497288729051,0.62272408550506,1.99512436700516,1.70733605754134,0.972426868273176,2.30574478890781,2.94149613520023,2.66696073361938,2.47242068686673,2.56735367673452,2.52697211763797,3.29523089857312,2.45214243801899,2.34103768674706,2.11283002936069,2.35485422718014,2.85776214769844,3.36064545240081,3.08654752741928,3.70877310722976,3.38557516309114,2.05721551431249,2.30718548007139,1.90748951957857,2.32554266611726,3.19971893412124,2.45382362885862,3.65855945745545,2.89376682581627,2.58027816307137,1.12228454331548,2.01679530811096,2.1670986122624,1.63692417267876,2.63392630016142,1.54325288784913,1.49886346762768,3.04111090979031,3.00819475667618,4.59091996965224,3.08827986767322,2.08681052058379
|short_description=p2@Brdt
}}
}}

Latest revision as of 14:01, 1 October 2015

Short description:p2@Brdt
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Brdt_5end
Coexpression cluster:MCL_coexpression_mm9:848
Association with transcript: -185bp_to_uc008ymd.1_5end
EntrezGene:Brdt
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Brdt

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.28
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C14.23
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I210.26
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A48.54
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F14.02
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F29.97
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B27.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C63.27
eyeball, neonate N01.CNhs11140.1532-43E73.84
eyeball, neonate N02.CNhs11205.1551-44G83.09
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C45.57
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E88.83
hippocampus, neonate N00.CNhs11228.627-43G16.69
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E54.57
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C28.99
medulla oblongata, neonate N30.CNhs11200.1396-42A38.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C98.16
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B74.22
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C14.48
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F85.17
thymus, neonate N03.CNhs11137.2104-43C75.61
thymus, neonate N06.CNhs11197.681-26C47.07
thymus, neonate N07.CNhs11211.713-19D39.53
thymus, neonate N10.CNhs11194.748-24E48.67
thymus, neonate N20.CNhs11186.820-7A29.65
thymus, neonate N25.CNhs11125.1362-25G710.78
thymus, neonate N30.CNhs11132.1393-42G213.56
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.29e-1023
neuroblast (sensu Vertebrata)1.29e-1023
neuron1.36e-0733
neuronal stem cell1.36e-0733
neuroblast1.36e-0733
electrically signaling cell1.36e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.32e-1954
neural tube2.58e-1752
neural rod2.58e-1752
future spinal cord2.58e-1752
neural keel2.58e-1752
central nervous system2.95e-1773
neurectoderm1.05e-1664
neural plate1.05e-1664
presumptive neural plate1.05e-1664
nervous system6.40e-1675
gray matter4.52e-1534
ecto-epithelium1.95e-1473
brain2.20e-1447
future brain2.20e-1447
pre-chordal neural plate3.10e-1449
regional part of brain5.12e-1446
ectoderm-derived structure1.41e-1395
ectoderm1.41e-1395
presumptive ectoderm1.41e-1395
anterior neural tube2.90e-1340
regional part of forebrain1.10e-1239
forebrain1.10e-1239
future forebrain1.10e-1239
brain grey matter2.32e-1229
regional part of telencephalon2.32e-1229
telencephalon2.32e-1229
structure with developmental contribution from neural crest6.47e-1292
cerebral cortex7.26e-0921
cerebral hemisphere7.26e-0921
pallium7.26e-0921
occipital lobe1.02e-0710
visual cortex1.02e-0710
neocortex1.02e-0710
regional part of cerebral cortex4.48e-0717
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