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FFCP PHASE1:Mm9::chrX:139953214..139953246,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:139953214..139953246,+
|DHSsupport=NA
|short_description=p3@Pak3
|DPIdataset=NA
|description=CAGE_peak_3_at_Pak3_5end
|association_with_transcript=0bp_to_ENSMUST00000134402_5end
|EntrezGene=18481
|EntrezGene=18481
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=A3KGC5
|UniProt=A3KGC5
|association_with_transcript=0bp_to_ENSMUST00000134402_5end
|cluster_id=chrX:139953214..139953246,+
|description=CAGE_peak_3_at_Pak3_5end
|id=chrX:139953214..139953246,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.39e-17!63;UBERON:0004121!2.73e-17!102;UBERON:0000924!2.73e-17!102;UBERON:0006601!2.73e-17!102;UBERON:0002346!2.49e-16!71;UBERON:0003075!2.49e-16!71;UBERON:0007284!2.49e-16!71;UBERON:0001049!3.03e-15!52;UBERON:0005068!3.03e-15!52;UBERON:0006241!3.03e-15!52;UBERON:0007135!3.03e-15!52;UBERON:0003056!4.40e-15!49;UBERON:0000955!2.26e-14!50;UBERON:0006238!2.26e-14!50;UBERON:0002616!6.89e-14!49;UBERON:0002020!1.49e-13!34;UBERON:0003080!4.02e-13!40;UBERON:0001017!7.05e-13!73;UBERON:0005743!7.05e-13!73;UBERON:0000073!8.25e-13!75;UBERON:0001016!8.25e-13!75;UBERON:0002780!1.45e-12!39;UBERON:0001890!1.45e-12!39;UBERON:0006240!1.45e-12!39;UBERON:0002791!3.88e-12!29;UBERON:0003528!3.88e-12!29;UBERON:0001893!3.88e-12!29;UBERON:0000956!9.76e-10!21;UBERON:0001869!9.76e-10!21;UBERON:0000203!9.76e-10!21;UBERON:0000153!3.34e-09!94;UBERON:0007811!3.54e-09!86;UBERON:0002619!6.10e-09!17;UBERON:0002021!3.09e-08!10;UBERON:0000411!3.09e-08!10;UBERON:0001950!3.09e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.10e-20,73;UBERON:0002346,2.88e-17,64;UBERON:0003075,2.88e-17,64;UBERON:0007284,2.88e-17,64;UBERON:0004121,2.66e-16,95;UBERON:0000924,2.66e-16,95;UBERON:0006601,2.66e-16,95;UBERON:0000073,4.87e-16,54;UBERON:0001049,8.97e-16,52;UBERON:0005068,8.97e-16,52;UBERON:0006241,8.97e-16,52;UBERON:0007135,8.97e-16,52;UBERON:0003056,2.22e-15,49;UBERON:0002020,7.29e-15,34;UBERON:0000955,8.19e-14,47;UBERON:0006238,8.19e-14,47;UBERON:0003080,2.85e-13,40;UBERON:0002616,2.95e-13,46;UBERON:0003528,3.99e-13,29;UBERON:0002791,3.99e-13,29;UBERON:0001893,3.99e-13,29;UBERON:0002780,1.26e-12,39;UBERON:0001890,1.26e-12,39;UBERON:0006240,1.26e-12,39;UBERON:0001017,5.03e-12,73;UBERON:0010314,6.04e-12,92;UBERON:0001016,1.01e-11,75;UBERON:0000956,3.54e-10,21;UBERON:0001869,3.54e-10,21;UBERON:0000203,3.54e-10,21;UBERON:0002021,1.05e-09,10;UBERON:0000411,1.05e-09,10;UBERON:0001950,1.05e-09,10;UBERON:0002619,3.81e-09,17
|phase1_expression=4.96461426024861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8343008897043,13.990016508293,11.9305388905093,0,1.09012578190223,0.878744730937887,1.36100929351998,0.139986421625363,0,0,0,0,3.60163210450326,5.15760191889762,6.70373719960675,2.22548106945558,0.528990979272033,2.53532561402472,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,2.69592992002042,1.35005938331691,1.89292465216244,1.99955689082663,2.65042249141936,4.04219637409348,1.53352753629178,0.919218786610021,1.10115880999389,4.59674417106676,3.68655679814984,2.63772575460388,1.28082701043374,3.12548022334056,3.35019598801657,2.8138130501584,4.88954392885792,3.83017161115768,3.70166370077668,3.16879057903011,0.454357159999104,1.43585964202892,1.15945795480671,0,0,0,0,0,0.702222100658759,9.54409806437123,3.11743205523443,4.59341446863442,3.23939865486365,8.98285341900225,10.1922095882658,21.3320010945999,0.216491041011214,0.253359865475099,0.505524445014783,0.5709193985953,0.517875767294343,2.82040064223167,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,1.88141931417128,1.13099932196708,0.247194967734374,2.31358971071859,0.884610551949874,2.42650274921114,0.220841518460394,1.93950101254089,0,0.585561594023094,1.46612694769419,0.255457055208591,0,0,0,11.3840885947665,12.8100168789215,4.02093926761166,22.5971616249959,18.4115129277838,8.51930982694196,12.1680947300818,2.03678727700633,0.870848794270651,1.26361379216837,2.52530227063769,0.390361328888111,1.37941262660084,1.80062129805349,3.16480117455002,4.62648194229029,4.99643509110914,3.27956035959051,3.88055056108524,0.431135985865684,0.945530400839096,0.879755620819744,0.657587197282725,1.39023624612799,0.696504333044333,1.64625709126355,0.59710280045548,0,0,0,0.414251545071004,0,0,0,0,0.462801338662135,0.697601834251224,0.536546802799238,0.700592054203017,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0.439100230582101,0.402619256281115,26.0759536219518,12.0398396483763,0,0,0.639864751605702,0.928946687441754,0.38660238396628,1.00841762311671,0.667134131534611,0.380451252225118,0.949058123089023,0.329397909448022,0.251335208800269,0.795825888164603,0.38992817423824,0.898819408654221,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.739012760666419,0.757965647081939,0.162964976442026,0.339490171550376,0.469380496577004,0,0.238043640886014,0.780534591431195,0.788175720530955,1.32878813789265,0.159454768657487,1.3109065177259,0.690739927463582,1.44649058581512,0,0,0.491764273019036,1.10374698521893,11.8807436590966,7.61875962849321,11.3115112309906,2.52470927204373,0.315508219416257,0.780877488593277,3.44677436372478,0.477937595905104,0.222798674082394,0.283076530788832,0,0,0.395287777946524,6.10510501201433,4.40014264145633,0.35613120733451,2.60619134965722,3.13443233647817,0,0,0,0,0,0.922305443831782,1.29214146584111,0,1.06949213515416,0.316036757935816,0,0,3.06395645178409,0.900305470156551,0.129358683782755,0.857348140126369,1.95074257006501,1.07021290561242,1.31639216481697,1.522324745573,0.23467170806371,0,0.882113592219848,6.43056386471772,5.65125493435669,4.82503399425247,7.04296829618505,7.2221995887827,0,13.9068976507882,0,0,0.370389054739423,0.376736914009382,0.27338845544205,0.457556346413045,0,0,0,0,0,0.406638934253697,0.432021363287205,0.418176592028937,0.436725127492355,0.269728692769641,0.826534557253359,0.523511883968059,0.259229946583586,0.621339313086926,6.20062232552609,1.79419855252775,1.98550188548517,3.69457257853691,2.32487682259916,8.27885014904813,4.81164678447591,12.1090077904874,18.7698226522022,9.66336483304024,7.4887801627045,0.316011120628178,0.405450430580328,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,4.30787728868902,0,0,0,0.19318959403219,2.62755465631655,2.01466786693992,3.00115730710692,10.5330141847426,25.9785847603851,17.9526842237799,22.3429250241365,19.4194096048367,22.6077231524312,17.3740596399631,23.6257875081132,20.2644541450899,31.2668262199101,23.2992140288319,0.93408612825759,3.99024873401031,2.04880326904961,1.94485373654635,1.67690530102386,1.65459157605013,2.889207461421,3.5025959730612,1.92551525755089,2.27427490587418,3.8021894983536,1.88626341386076,1.68554713445788,2.43295579138503,2.52716063404698,3.81034953026459,1.97003354106254,0.578727661391115,4.94503080963968,1.47198920134397,2.05721551431249,2.30718548007139,3.33810665926249,2.0348498328526,1.88218760830661,2.876896668317,2.19513567447327,2.36762740294059,2.58027816307137,0.561142271657738,2.37270036248348,2.1670986122624,3.6830793885272,1.54936841185966,2.12197272079256,3.49734809113124,3.27504251823572,1.28922632428979,2.86932498103265,1.54413993383661,1.85494268496337
|phase1_expression=4.96461426024861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8343008897043,13.990016508293,11.9305388905093,0,1.09012578190223,0.878744730937887,1.36100929351998,0.139986421625363,0,0,0,0,3.60163210450326,5.15760191889762,6.70373719960675,2.22548106945558,0.528990979272033,2.53532561402472,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,2.69592992002042,1.35005938331691,1.89292465216244,1.99955689082663,2.65042249141936,4.04219637409348,1.53352753629178,0.919218786610021,1.10115880999389,4.59674417106676,3.68655679814984,2.63772575460388,1.28082701043374,3.12548022334056,3.35019598801657,2.8138130501584,4.88954392885792,3.83017161115768,3.70166370077668,3.16879057903011,0.454357159999104,1.43585964202892,1.15945795480671,0,0,0,0,0,0.702222100658759,9.54409806437123,3.11743205523443,4.59341446863442,3.23939865486365,8.98285341900225,10.1922095882658,21.3320010945999,0.216491041011214,0.253359865475099,0.505524445014783,0.5709193985953,0.517875767294343,2.82040064223167,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,1.88141931417128,1.13099932196708,0.247194967734374,2.31358971071859,0.884610551949874,2.42650274921114,0.220841518460394,1.93950101254089,0,0.585561594023094,1.46612694769419,0.255457055208591,0,0,0,11.3840885947665,12.8100168789215,4.02093926761166,22.5971616249959,18.4115129277838,8.51930982694196,12.1680947300818,2.03678727700633,0.870848794270651,1.26361379216837,2.52530227063769,0.390361328888111,1.37941262660084,1.80062129805349,3.16480117455002,4.62648194229029,4.99643509110914,3.27956035959051,3.88055056108524,0.431135985865684,0.945530400839096,0.879755620819744,0.657587197282725,1.39023624612799,0.696504333044333,1.64625709126355,0.59710280045548,0,0,0,0.414251545071004,0,0,0,0,0.462801338662135,0.697601834251224,0.536546802799238,0.700592054203017,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0.439100230582101,0.402619256281115,26.0759536219518,12.0398396483763,0,0,0.639864751605702,0.928946687441754,0.38660238396628,1.00841762311671,0.667134131534611,0.380451252225118,0.949058123089023,0.329397909448022,0.251335208800269,0.795825888164603,0.38992817423824,0.898819408654221,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.739012760666419,0.757965647081939,0.162964976442026,0.339490171550376,0.469380496577004,0,0.238043640886014,0.780534591431195,0.788175720530955,1.32878813789265,0.159454768657487,1.3109065177259,0.690739927463582,1.44649058581512,0,0,0.491764273019036,1.10374698521893,11.8807436590966,7.61875962849321,11.3115112309906,2.52470927204373,0.315508219416257,0.780877488593277,3.44677436372478,0.477937595905104,0.222798674082394,0.283076530788832,0,0,0.395287777946524,6.10510501201433,4.40014264145633,0.35613120733451,2.60619134965722,3.13443233647817,0,0,0,0,0,0.922305443831782,1.29214146584111,0,1.06949213515416,0.316036757935816,0,0,3.06395645178409,0.900305470156551,0.129358683782755,0.857348140126369,1.95074257006501,1.07021290561242,1.31639216481697,1.522324745573,0.23467170806371,0,0.882113592219848,6.43056386471772,5.65125493435669,4.82503399425247,7.04296829618505,7.2221995887827,0,13.9068976507882,0,0,0.370389054739423,0.376736914009382,0.27338845544205,0.457556346413045,0,0,0,0,0,0.406638934253697,0.432021363287205,0.418176592028937,0.436725127492355,0.269728692769641,0.826534557253359,0.523511883968059,0.259229946583586,0.621339313086926,6.20062232552609,1.79419855252775,1.98550188548517,3.69457257853691,2.32487682259916,8.27885014904813,4.81164678447591,12.1090077904874,18.7698226522022,9.66336483304024,7.4887801627045,0.316011120628178,0.405450430580328,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,4.30787728868902,0,0,0,0.19318959403219,2.62755465631655,2.01466786693992,3.00115730710692,10.5330141847426,25.9785847603851,17.9526842237799,22.3429250241365,19.4194096048367,22.6077231524312,17.3740596399631,23.6257875081132,20.2644541450899,31.2668262199101,23.2992140288319,0.93408612825759,3.99024873401031,2.04880326904961,1.94485373654635,1.67690530102386,1.65459157605013,2.889207461421,3.5025959730612,1.92551525755089,2.27427490587418,3.8021894983536,1.88626341386076,1.68554713445788,2.43295579138503,2.52716063404698,3.81034953026459,1.97003354106254,0.578727661391115,4.94503080963968,1.47198920134397,2.05721551431249,2.30718548007139,3.33810665926249,2.0348498328526,1.88218760830661,2.876896668317,2.19513567447327,2.36762740294059,2.58027816307137,0.561142271657738,2.37270036248348,2.1670986122624,3.6830793885272,1.54936841185966,2.12197272079256,3.49734809113124,3.27504251823572,1.28922632428979,2.86932498103265,1.54413993383661,1.85494268496337
|short_description=p3@Pak3
}}
}}

Latest revision as of 16:03, 1 October 2015

Short description:p3@Pak3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pak3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000134402_5end
EntrezGene:Pak3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pak3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.99
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.93
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.38
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F14.02
cortex, adult.CNhs10473.12-14D522.60
cortex, neonate N30.CNhs11107.1392-42F218.41
diencephalon, adult.CNhs10482.20-12F28.52
diencephalon, neonate N30.CNhs11201.1388-42B212.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C64.63
eyeball, neonate N01.CNhs11140.1532-43E75.00
eyeball, neonate N02.CNhs11205.1551-44G83.28
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E826.08
hippocampus, neonate N00.CNhs11228.627-43G112.04
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C211.88
medulla oblongata, neonate N30.CNhs11200.1396-42A37.62
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I74.40
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G45.65
skin, neonate N03.CNhs11215.662-22H34.83
skin, neonate N06.CNhs11097.693-20I57.04
skin, neonate N10.CNhs11108.762-6C47.22
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C913.91
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G58.28
testis, neonate N00.CNhs11189.1300-22B74.81
testis, neonate N07.CNhs11222.726-26I412.11
testis, neonate N10.CNhs11204.763-44D918.77
testis, neonate N20.CNhs11110.839-18H39.66
testis, neonate N30.CNhs11130.1391-42E27.49
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F810.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.98
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A623.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A831.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.30
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ecto-epithelium1.10e-2073
neurectoderm2.88e-1764
neural plate2.88e-1764
presumptive neural plate2.88e-1764
ectoderm-derived structure2.66e-1695
ectoderm2.66e-1695
presumptive ectoderm2.66e-1695
regional part of nervous system4.87e-1654
neural tube8.97e-1652
neural rod8.97e-1652
future spinal cord8.97e-1652
neural keel8.97e-1652
pre-chordal neural plate2.22e-1549
gray matter7.29e-1534
brain8.19e-1447
future brain8.19e-1447
anterior neural tube2.85e-1340
regional part of brain2.95e-1346
brain grey matter3.99e-1329
regional part of telencephalon3.99e-1329
telencephalon3.99e-1329
regional part of forebrain1.26e-1239
forebrain1.26e-1239
future forebrain1.26e-1239
central nervous system5.03e-1273
structure with developmental contribution from neural crest6.04e-1292
nervous system1.01e-1175
cerebral cortex3.54e-1021
cerebral hemisphere3.54e-1021
pallium3.54e-1021
occipital lobe1.05e-0910
visual cortex1.05e-0910
neocortex1.05e-0910
regional part of cerebral cortex3.81e-0917
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