FFCP PHASE1:Mm9::chr13:46764814..46764870,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=97863 | |EntrezGene=97863 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=616 | |||
|TSSclassifier=NA | |||
|UniProt=E9PXH4 | |UniProt=E9PXH4 | ||
|association_with_transcript=0bp_to_ENSMUST00000091627_5end | |association_with_transcript=0bp_to_ENSMUST00000091627_5end | ||
|cluster_id=chr13:46764814..46764870,+ | |||
|description=CAGE_peak_1_at_C78339_5end | |description=CAGE_peak_1_at_C78339_5end | ||
|id=chr13:46764814..46764870,+ | |id=chr13:46764814..46764870,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.87e-09!23;CL:0000337!1.87e-09!23;CL:0000393!5.40e-08!39;CL:0000211!5.40e-08!39;CL:0000540!3.72e-07!33;CL:0000047!3.72e-07!33;CL:0000031!3.72e-07!33;CL:0000404!3.72e-07!33 | |ontology_enrichment_celltype=CL:0000117!1.87e-09!23;CL:0000337!1.87e-09!23;CL:0000393!5.40e-08!39;CL:0000211!5.40e-08!39;CL:0000540!3.72e-07!33;CL:0000047!3.72e-07!33;CL:0000031!3.72e-07!33;CL:0000404!3.72e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-09,23;CL:0000337,1.87e-09,23;CL:0000393,5.40e-08,39;CL:0000211,5.40e-08,39;CL:0000540,3.72e-07,33;CL:0000047,3.72e-07,33;CL:0000031,3.72e-07,33;CL:0000404,3.72e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.03e-11!63;UBERON:0000955!1.81e-11!50;UBERON:0006238!1.81e-11!50;UBERON:0002616!3.68e-11!49;UBERON:0000073!9.76e-11!75;UBERON:0001016!9.76e-11!75;UBERON:0001049!1.20e-10!52;UBERON:0005068!1.20e-10!52;UBERON:0006241!1.20e-10!52;UBERON:0007135!1.20e-10!52;UBERON:0004121!1.22e-10!102;UBERON:0000924!1.22e-10!102;UBERON:0006601!1.22e-10!102;UBERON:0003056!1.97e-10!49;UBERON:0001017!2.12e-10!73;UBERON:0005743!2.12e-10!73;UBERON:0002346!1.13e-09!71;UBERON:0003075!1.13e-09!71;UBERON:0007284!1.13e-09!71;UBERON:0002020!1.66e-09!34;UBERON:0003080!2.52e-09!40;UBERON:0002791!3.21e-09!29;UBERON:0003528!3.21e-09!29;UBERON:0001893!3.21e-09!29;UBERON:0002780!8.73e-09!39;UBERON:0001890!8.73e-09!39;UBERON:0006240!8.73e-09!39;UBERON:0007023!3.10e-08!51;UBERON:0004111!2.97e-07!122;UBERON:0000025!6.33e-07!114 | |ontology_enrichment_uberon=UBERON:0000033!1.03e-11!63;UBERON:0000955!1.81e-11!50;UBERON:0006238!1.81e-11!50;UBERON:0002616!3.68e-11!49;UBERON:0000073!9.76e-11!75;UBERON:0001016!9.76e-11!75;UBERON:0001049!1.20e-10!52;UBERON:0005068!1.20e-10!52;UBERON:0006241!1.20e-10!52;UBERON:0007135!1.20e-10!52;UBERON:0004121!1.22e-10!102;UBERON:0000924!1.22e-10!102;UBERON:0006601!1.22e-10!102;UBERON:0003056!1.97e-10!49;UBERON:0001017!2.12e-10!73;UBERON:0005743!2.12e-10!73;UBERON:0002346!1.13e-09!71;UBERON:0003075!1.13e-09!71;UBERON:0007284!1.13e-09!71;UBERON:0002020!1.66e-09!34;UBERON:0003080!2.52e-09!40;UBERON:0002791!3.21e-09!29;UBERON:0003528!3.21e-09!29;UBERON:0001893!3.21e-09!29;UBERON:0002780!8.73e-09!39;UBERON:0001890!8.73e-09!39;UBERON:0006240!8.73e-09!39;UBERON:0007023!3.10e-08!51;UBERON:0004111!2.97e-07!122;UBERON:0000025!6.33e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.27e-11,54;UBERON:0004121,1.27e-11,95;UBERON:0000924,1.27e-11,95;UBERON:0006601,1.27e-11,95;UBERON:0002346,5.71e-11,64;UBERON:0003075,5.71e-11,64;UBERON:0007284,5.71e-11,64;UBERON:0001016,9.76e-11,75;UBERON:0001049,1.20e-10,52;UBERON:0005068,1.20e-10,52;UBERON:0006241,1.20e-10,52;UBERON:0007135,1.20e-10,52;UBERON:0010371,1.44e-10,73;UBERON:0003056,1.97e-10,49;UBERON:0001017,2.12e-10,73;UBERON:0000955,5.91e-10,47;UBERON:0006238,5.91e-10,47;UBERON:0002616,1.17e-09,46;UBERON:0002020,1.66e-09,34;UBERON:0003080,2.52e-09,40;UBERON:0003528,3.21e-09,29;UBERON:0002791,3.21e-09,29;UBERON:0001893,3.21e-09,29;UBERON:0010314,3.26e-09,92;UBERON:0002780,8.73e-09,39;UBERON:0001890,8.73e-09,39;UBERON:0006240,8.73e-09,39;UBERON:0007023,3.10e-08,51;UBERON:0000160,8.29e-08,31;UBERON:0004111,2.97e-07,122;UBERON:0000025,6.33e-07,114 | |||
|phase1_expression=23.0614339830903,128.073974603646,149.694749759157,149.114856174267,199.356500518646,40.2910252588536,48.3578166032738,21.6927183381848,2.67498572088167,4.21316147379588,7.36237263369671,4.46724090373884,11.641649635322,18.1834437031515,9.32707333083856,14.1732687172878,7.69518065940961,14.8267217718372,11.6547268564878,14.8536378129311,45.5832035209734,8.04256704727171,7.57479388502913,39.0381511615912,47.7171304619714,84.986330689023,74.5218253355199,48.481027354325,62.7077284206034,56.4547490662245,30.1553494491214,5.08024538767705,1.84519436275371,15.8481681015439,17.3310971850765,19.6156881523021,15.3127017196777,18.4153917524239,15.626706890476,12.0410461113974,14.1175557127443,19.8083190637949,14.5653105909346,23.2909113254818,26.4593790482933,20.5572362421083,11.7358701652206,17.2239873540553,17.7945808014922,20.8039992009483,15.9584520652913,14.3752564364972,9.2280433331755,7.25362142011344,8.06625117941913,28.5557973999901,28.6533439938757,36.097046459421,44.9142543108307,43.3772603003067,36.1283899998522,14.5703148789727,5.33576877666684,10.7987966073768,6.92206453796882,9.2362414942993,12.2836045312546,17.28982373947,38.1577773295198,30.6463480012938,35.9655683910863,21.4238238302853,22.5285911770646,38.4621109534956,29.1370231895439,31.2534387447407,59.4625757396699,45.584379696412,48.0788449092042,46.5558595687584,45.2863835831928,58.3422975023571,46.6235608332306,53.4624479530096,47.3674568108111,29.1682299618931,21.6404954814636,35.7886935984577,23.5508461266202,29.1706222012192,20.0006497204158,38.7190744641624,20.3991400112325,47.4938808641279,32.4888208723835,42.5625542742469,24.8586623633201,16.3613109674935,9.35229616570328,14.8402621294343,19.858922188512,23.0987659345772,17.8363667794652,35.5533351576666,10.8245520505607,11.6545538118545,11.62706223534,38.5941513450423,7.76813650941515,23.1569736941127,18.0424739836781,22.2259799167863,16.8349312996923,22.1562281612355,16.344830291863,18.975655290781,31.8881508377342,20.8223073964673,17.6922110389975,15.0443170451091,12.5879665522424,12.1218813283806,22.3670113461747,29.8636412951778,28.4847521266299,51.0914110417183,5.15205035375457,4.19931911695385,5.59108999121485,69.5028566838377,48.4950638987744,45.7381841690826,42.5869584471077,33.7544403676036,52.3625872290091,43.9673822913623,26.070877145681,14.1823946495506,25.0195530849338,25.4634645622634,21.3397526458834,25.9789378009824,27.7295679900238,20.9479696791644,28.3712201461037,26.2633126583942,29.6097449608743,26.9051505568576,25.0058871802097,26.8530633838303,24.2812551346249,24.1115305670332,23.3559689349502,21.9398864908965,20.9897779136102,20.1024609486678,2.80885274925294,3.60287069960601,3.9782889915383,22.3695834338342,17.8239805585633,19.6267646992506,26.5154103855435,22.8246508826988,21.9059300300077,19.9979192485351,24.1446061259657,20.2004042295203,19.7471819896177,18.0584210487005,20.1861335769181,19.0059983652932,19.3204101456125,21.6072334204199,41.8476997642613,33.9585220851639,109.699035950621,40.9898378328494,15.5700422890721,18.8111704206955,19.0723842756698,22.5885547578144,26.4629872175396,32.3383564391351,41.758557415917,33.1044898995262,28.1495433856302,27.4559931416788,30.4143975905827,38.6492345721315,41.4985055759413,44.2093626624695,17.0701110857774,18.8510045806053,34.9393980586549,16.0884548997798,20.1710586654331,20.4095235880827,20.5518745653836,18.5988786454299,25.7477913659855,30.4790994886847,34.0920521150221,14.181833985868,12.579775687245,15.5154857545549,14.6059287399722,13.5059209461353,15.786802810448,14.6725030099913,16.0513874507285,15.3754391385326,77.6348315247715,20.8398930694362,18.0981850406445,26.5207821844467,25.4744327201115,31.3588288886189,19.7685913478267,18.5701583535075,16.7853925735287,16.2955282344181,13.3773441524446,25.1259386162724,23.3282768068293,27.123577052234,17.339865851681,18.3815692408483,20.7291199254733,18.6804178775941,17.2684981865896,17.9364832641074,9.04747703635634,4.89515115436839,39.8329061145419,28.6974216156922,56.0321559057394,45.595346084367,20.1639982813311,18.4303776859192,17.9839685067266,16.7888660047555,20.8960695800815,16.2498782607735,23.171062104569,26.0430408325726,20.6453457854196,23.9649803487276,20.5549644532192,31.1681676929153,23.1362338889478,16.2039699337202,23.1299482282078,25.0754586918254,17.2568679841952,12.3818124439041,16.3254720760966,17.7288774970544,18.8993211443695,26.1319875752338,20.4158351602895,16.3590178264877,16.7553767840819,19.5942789920206,18.9753495434998,19.5957532171555,36.4270378156553,20.1668425315067,16.0404767890616,17.1469628025274,26.0690143454142,25.6851097346982,27.6442354611563,9.74287837166718,21.1204537257339,32.4103068421645,28.2276349510351,21.6000991353339,17.2766936564619,16.8876189798836,19.0995750405018,24.6211349617592,42.5562021479582,58.0381195292895,11.2774781326583,15.4790150972417,11.6672552242918,10.5486335922627,8.20165366326151,10.7525741407066,7.13909405974192,6.71766971153558,7.87739850685216,16.2294005062569,21.51084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|phase1_expression=23.0614339830903,128.073974603646,149.694749759157,149.114856174267,199.356500518646,40.2910252588536,48.3578166032738,21.6927183381848,2.67498572088167,4.21316147379588,7.36237263369671,4.46724090373884,11.641649635322,18.1834437031515,9.32707333083856,14.1732687172878,7.69518065940961,14.8267217718372,11.6547268564878,14.8536378129311,45.5832035209734,8.04256704727171,7.57479388502913,39.0381511615912,47.7171304619714,84.986330689023,74.5218253355199,48.481027354325,62.7077284206034,56.4547490662245,30.1553494491214,5.08024538767705,1.84519436275371,15.8481681015439,17.3310971850765,19.6156881523021,15.3127017196777,18.4153917524239,15.626706890476,12.0410461113974,14.1175557127443,19.8083190637949,14.5653105909346,23.2909113254818,26.4593790482933,20.5572362421083,11.7358701652206,17.2239873540553,17.7945808014922,20.8039992009483,15.9584520652913,14.3752564364972,9.2280433331755,7.25362142011344,8.06625117941913,28.5557973999901,28.6533439938757,36.097046459421,44.9142543108307,43.3772603003067,36.1283899998522,14.5703148789727,5.33576877666684,10.7987966073768,6.92206453796882,9.2362414942993,12.2836045312546,17.28982373947,38.1577773295198,30.6463480012938,35.9655683910863,21.4238238302853,22.5285911770646,38.4621109534956,29.1370231895439,31.2534387447407,59.4625757396699,45.584379696412,48.0788449092042,46.5558595687584,45.2863835831928,58.3422975023571,46.6235608332306,53.4624479530096,47.3674568108111,29.1682299618931,21.6404954814636,35.7886935984577,23.5508461266202,29.1706222012192,20.0006497204158,38.7190744641624,20.3991400112325,47.4938808641279,32.4888208723835,42.5625542742469,24.8586623633201,16.3613109674935,9.35229616570328,14.8402621294343,19.858922188512,23.0987659345772,17.8363667794652,35.5533351576666,10.8245520505607,11.6545538118545,11.62706223534,38.5941513450423,7.76813650941515,23.1569736941127,18.0424739836781,22.2259799167863,16.8349312996923,22.1562281612355,16.344830291863,18.975655290781,31.8881508377342,20.8223073964673,17.6922110389975,15.0443170451091,12.5879665522424,12.1218813283806,22.3670113461747,29.8636412951778,28.4847521266299,51.0914110417183,5.15205035375457,4.19931911695385,5.59108999121485,69.5028566838377,48.4950638987744,45.7381841690826,42.5869584471077,33.7544403676036,52.3625872290091,43.9673822913623,26.070877145681,14.1823946495506,25.0195530849338,25.4634645622634,21.3397526458834,25.9789378009824,27.7295679900238,20.9479696791644,28.3712201461037,26.2633126583942,29.6097449608743,26.9051505568576,25.0058871802097,26.8530633838303,24.2812551346249,24.1115305670332,23.3559689349502,21.9398864908965,20.9897779136102,20.1024609486678,2.80885274925294,3.60287069960601,3.9782889915383,22.3695834338342,17.8239805585633,19.6267646992506,26.5154103855435,22.8246508826988,21.9059300300077,19.9979192485351,24.1446061259657,20.2004042295203,19.7471819896177,18.0584210487005,20.1861335769181,19.0059983652932,19.3204101456125,21.6072334204199,41.8476997642613,33.9585220851639,109.699035950621,40.9898378328494,15.5700422890721,18.8111704206955,19.0723842756698,22.5885547578144,26.4629872175396,32.3383564391351,41.758557415917,33.1044898995262,28.1495433856302,27.4559931416788,30.4143975905827,38.6492345721315,41.4985055759413,44.2093626624695,17.0701110857774,18.8510045806053,34.9393980586549,16.0884548997798,20.1710586654331,20.4095235880827,20.5518745653836,18.5988786454299,25.7477913659855,30.4790994886847,34.0920521150221,14.181833985868,12.579775687245,15.5154857545549,14.6059287399722,13.5059209461353,15.786802810448,14.6725030099913,16.0513874507285,15.3754391385326,77.6348315247715,20.8398930694362,18.0981850406445,26.5207821844467,25.4744327201115,31.3588288886189,19.7685913478267,18.5701583535075,16.7853925735287,16.2955282344181,13.3773441524446,25.1259386162724,23.3282768068293,27.123577052234,17.339865851681,18.3815692408483,20.7291199254733,18.6804178775941,17.2684981865896,17.9364832641074,9.04747703635634,4.89515115436839,39.8329061145419,28.6974216156922,56.0321559057394,45.595346084367,20.1639982813311,18.4303776859192,17.9839685067266,16.7888660047555,20.8960695800815,16.2498782607735,23.171062104569,26.0430408325726,20.6453457854196,23.9649803487276,20.5549644532192,31.1681676929153,23.1362338889478,16.2039699337202,23.1299482282078,25.0754586918254,17.2568679841952,12.3818124439041,16.3254720760966,17.7288774970544,18.8993211443695,26.1319875752338,20.4158351602895,16.3590178264877,16.7553767840819,19.5942789920206,18.9753495434998,19.5957532171555,36.4270378156553,20.1668425315067,16.0404767890616,17.1469628025274,26.0690143454142,25.6851097346982,27.6442354611563,9.74287837166718,21.1204537257339,32.4103068421645,28.2276349510351,21.6000991353339,17.2766936564619,16.8876189798836,19.0995750405018,24.6211349617592,42.5562021479582,58.0381195292895,11.2774781326583,15.4790150972417,11.6672552242918,10.5486335922627,8.20165366326151,10.7525741407066,7.13909405974192,6.71766971153558,7.87739850685216,16.2294005062569,21.51084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| ||
|short_description=p1@C78339 | |short_description=p1@C78339 | ||
}} | }} |
Latest revision as of 16:07, 1 October 2015
Short description: | p1@C78339 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C78339_5end |
Coexpression cluster: | MCL_coexpression_mm9:616 |
Association with transcript: | 0bp_to_ENSMUST00000091627_5end |
EntrezGene: | C78339 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.87e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.87e-09 | 23 |
electrically responsive cell | 5.40e-08 | 39 |
electrically active cell | 5.40e-08 | 39 |
neuron | 3.72e-07 | 33 |
neuronal stem cell | 3.72e-07 | 33 |
neuroblast | 3.72e-07 | 33 |
electrically signaling cell | 3.72e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.27e-11 | 54 |
ectoderm-derived structure | 1.27e-11 | 95 |
ectoderm | 1.27e-11 | 95 |
presumptive ectoderm | 1.27e-11 | 95 |
neurectoderm | 5.71e-11 | 64 |
neural plate | 5.71e-11 | 64 |
presumptive neural plate | 5.71e-11 | 64 |
nervous system | 9.76e-11 | 75 |
neural tube | 1.20e-10 | 52 |
neural rod | 1.20e-10 | 52 |
future spinal cord | 1.20e-10 | 52 |
neural keel | 1.20e-10 | 52 |
ecto-epithelium | 1.44e-10 | 73 |
pre-chordal neural plate | 1.97e-10 | 49 |
central nervous system | 2.12e-10 | 73 |
brain | 5.91e-10 | 47 |
future brain | 5.91e-10 | 47 |
regional part of brain | 1.17e-09 | 46 |
gray matter | 1.66e-09 | 34 |
anterior neural tube | 2.52e-09 | 40 |
brain grey matter | 3.21e-09 | 29 |
regional part of telencephalon | 3.21e-09 | 29 |
telencephalon | 3.21e-09 | 29 |
structure with developmental contribution from neural crest | 3.26e-09 | 92 |
regional part of forebrain | 8.73e-09 | 39 |
forebrain | 8.73e-09 | 39 |
future forebrain | 8.73e-09 | 39 |
adult organism | 3.10e-08 | 51 |
intestine | 8.29e-08 | 31 |
anatomical conduit | 2.97e-07 | 122 |
tube | 6.33e-07 | 114 |