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FFCP PHASE1:Mm9::chr3:143865314..143865331,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:143865314..143865331,-
|DHSsupport=NA
|short_description=p5@Lmo4
|DPIdataset=NA
|description=CAGE_peak_5_at_Lmo4_5end
|association_with_transcript=-18bp_to_ENSMUST00000121112,NM_001161770,uc008rpm.1_5end
|EntrezGene=16911
|EntrezGene=16911
|HGNC=
|HGNC=
|MCL_coexpression_id=2365
|TSSclassifier=NA
|UniProt=P61969,Q542S1
|UniProt=P61969,Q542S1
|association_with_transcript=-18bp_to_ENSMUST00000121112,NM_001161770,uc008rpm.1_5end
|cluster_id=chr3:143865314..143865331,-
|description=CAGE_peak_5_at_Lmo4_5end
|id=chr3:143865314..143865331,-
|ontology_enrichment_celltype=CL:0000055!3.01e-09!50;CL:0000221!3.18e-08!44;CL:0000133!3.18e-08!44;CL:0002319!7.96e-08!43;CL:0000107!6.50e-07!9;CL:0000393!8.21e-07!39;CL:0000211!8.21e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000221,4.94e-09,44;CL:0000133,4.94e-09,44;CL:0002319,1.34e-08,43;CL:0000393,1.69e-07,39;CL:0000211,1.69e-07,39;CL:0000107,2.57e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!5.38e-22!102;UBERON:0000924!5.38e-22!102;UBERON:0006601!5.38e-22!102;UBERON:0000073!1.83e-20!75;UBERON:0001016!1.83e-20!75;UBERON:0001017!4.01e-20!73;UBERON:0005743!4.01e-20!73;UBERON:0000033!2.28e-13!63;UBERON:0000955!2.29e-12!50;UBERON:0006238!2.29e-12!50;UBERON:0002346!3.39e-12!71;UBERON:0003075!3.39e-12!71;UBERON:0007284!3.39e-12!71;UBERON:0002616!4.41e-12!49;UBERON:0001049!8.35e-12!52;UBERON:0005068!8.35e-12!52;UBERON:0006241!8.35e-12!52;UBERON:0007135!8.35e-12!52;UBERON:0003080!4.43e-11!40;UBERON:0002780!5.21e-11!39;UBERON:0001890!5.21e-11!39;UBERON:0006240!5.21e-11!39;UBERON:0003056!6.55e-11!49;UBERON:0002619!1.16e-09!17;UBERON:0002021!1.15e-07!10;UBERON:0000411!1.15e-07!10;UBERON:0001950!1.15e-07!10;UBERON:0000956!2.41e-07!21;UBERON:0001869!2.41e-07!21;UBERON:0000203!2.41e-07!21;UBERON:0002020!2.66e-07!34;UBERON:0002410!6.50e-07!9;UBERON:0000010!7.40e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.04e-24,95;UBERON:0000924,1.04e-24,95;UBERON:0006601,1.04e-24,95;UBERON:0001016,1.01e-21,75;UBERON:0001017,2.36e-21,73;UBERON:0010371,1.34e-17,73;UBERON:0002346,8.07e-14,64;UBERON:0003075,8.07e-14,64;UBERON:0007284,8.07e-14,64;UBERON:0000073,1.83e-13,54;UBERON:0001049,1.97e-12,52;UBERON:0005068,1.97e-12,52;UBERON:0006241,1.97e-12,52;UBERON:0007135,1.97e-12,52;UBERON:0000955,3.06e-12,47;UBERON:0006238,3.06e-12,47;UBERON:0003080,3.56e-12,40;UBERON:0002780,4.21e-12,39;UBERON:0001890,4.21e-12,39;UBERON:0006240,4.21e-12,39;UBERON:0002616,6.13e-12,46;UBERON:0003056,1.33e-11,49;UBERON:0010314,3.10e-11,92;UBERON:0002619,2.86e-10,17;UBERON:0002021,3.99e-08,10;UBERON:0000411,3.99e-08,10;UBERON:0001950,3.99e-08,10;UBERON:0002020,4.69e-08,34;UBERON:0000956,6.89e-08,21;UBERON:0001869,6.89e-08,21;UBERON:0000203,6.89e-08,21;UBERON:0003528,2.11e-07,29;UBERON:0002791,2.11e-07,29;UBERON:0001893,2.11e-07,29;UBERON:0002410,2.57e-07,9;UBERON:0000010,2.95e-07,11
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|phase1_expression=4.00372117761985,0,0,0,0.500895729946347,0.503637815735669,0,0.387369970324729,0.140788722151667,0,0,0,0.684802919724823,0.262261207256992,0.333109761815663,0,0,0.630924330716475,1.37114433605739,0.84877930359606,1.9559956734746,0.496454756004426,0.783599367416806,0.319984845586813,0.45881856213434,0,0.430761996159075,0.430942465371778,1.14014051673824,0,0.443461021310609,0,0,0,0.288851619751275,0.332469290716985,0,5.02237956884289,3.1253413780952,4.71171369576418,5.88231488031014,6.83045484958446,6.311634589405,4.02869817521847,2.33166941804883,3.30384153891027,10.1710874765245,2.39827672018491,3.73466510648602,4.6663175777828,7.55926676776958,7.18762821824858,2.01339127269284,0.725362142011344,0,2.31533492432352,4.01146815914259,7.73508138416164,1.21389876515759,1.05798195854407,1.90149421051854,2.71075625655306,2.66788438833342,0.899899717281399,1.97773272513395,0.7104801149461,2.09720077362883,1.92109152660777,0.518448061542388,0.675029691658453,0,2.85650984403804,3.97563373712904,1.95985278743926,1.24599112323707,2.75765635983006,2.20231761998777,2.29837208553338,1.84327839907492,1.18697658957174,1.64677758484337,1.04182674111352,0,1.12552522006336,1.68078072554491,1.17851434189467,2.27794689278565,1.1183966749518,1.36307147999731,2.49386148352392,2.31891590961342,0,0,0,0,1.34408066129201,1.54488862144927,1.36344258062446,1.29893002301434,0.70667914902068,5.0703631119605,0,0,0,0,0,0,1.25602267690966,1.03575153458869,1.1875371125186,1.04091196059682,0.913396434936424,0.461230994512117,0.904335843315735,1.52865319276416,1.88499886994513,0,3.03658649531814,0.884610551949874,1.13236794963186,0.883366073841574,0.484875253135222,1.86391761218122,0.878342391034642,0.83778682725382,0.255457055208591,0.599075622529601,0,0.381210681219194,1.64769703345305,3.20250421973039,7.53926112677186,8.34356736922927,10.4843337505436,1.87009240103604,3.40706652442291,1.01839363850316,0.995255764880744,0.505445516867349,1.05220927943237,0.780722657776222,2.29902104433473,0.720248519221397,1.80845781402858,1.2246569847239,1.7935920839879,2.15513966487376,2.58703370739016,0.431135985865684,1.51284864134255,1.23165786914764,1.53437012699302,2.50242524303038,1.0447564995665,2.05782136407943,0.59710280045548,0.702213187313235,0.772043721344145,0.852490498186778,1.44988040774851,1.17263029990548,0.720248245844059,1.65721314909647,1.18058539048442,1.23413690309903,1.39520366850245,0.804820204198858,0.700592054203017,0.822799249567402,0.656669856316381,1.21603214318784,1.02339991197733,1.75640092232841,0.939444931322602,11.3556572224629,6.48299057989492,0,0.264450566663544,1.91959425481711,3.0190767341857,1.54640953586512,0.80673409849337,1.11189021922435,0.760902504450237,0,1.31759163779209,0.502670417600539,1.1937388322469,0.58489226135736,0,1.08069024937347,0.199141273254367,2.0863469104839,0.799739588268102,0,0.407302655690628,0.969762435838129,1.26244475802573,0.885311519739602,0.885660887877613,1.72698600625512,1.48076596706161,0.889357881261447,0.83422552858047,0.982794975566015,0.674586337154561,1.21716072833102,1.4470629585145,0.50925170356284,0.575392274901621,0.162135226775035,0.823684239564244,0,0,0,0.252578877947112,0.358794827043824,0.482443521363367,1.29327233116623,0.37898282354097,0,0.509235257325564,0.938760993154008,1.17254380209271,0.476087281772027,1.56106918286239,1.57635144106191,1.55025282754142,1.75400245523236,0.327726629431476,0.863424909329478,2.16973587872267,1.50791283939272,2.17562273527484,3.44234991113325,3.58717770196152,1.60550589987792,1.87538698547525,1.14754461763673,1.00988370881749,6.94118082715765,12.1036010731958,6.89354872744957,8.12493913038677,10.6943363559549,8.20921939287614,11.334699646897,9.64444331107329,10.2774822266096,2.24924921495265,0.709700426041343,1.24645922567079,1.79175655288934,1.48473110675282,0,0.971122544619926,0.302323556964751,1.50884063804718,0.590603785761546,0.922305443831782,1.03371317267288,0.727067458955011,0.356497378384721,1.26414703174326,1.05418608574999,2.06271086496374,5.10659408630682,4.14140516272013,5.95049945400671,8.78781843629528,6.38424841112185,9.81028496811388,7.0756078858912,7.00269382963578,0.704015124191131,0.63549621259146,3.74898276693435,3.2977250588296,2.42196640043858,1.86970067277283,3.22305328808468,4.26766339337159,0,1.11255181206306,0.341741761595705,2.06386867963222,0.555583582109135,0.565105371014073,0.546776910884101,0.228778173206523,0.339956859987711,0.139951452323658,0,6.68269432610579,2.68885594543965,1.01659733563424,1.51207477150522,1.25452977608681,1.9652630737156,1.07891477107857,1.73572257023205,3.66458318777641,1.16653475962614,1.86401793926078,0,1.49516546043979,1.15820943319968,1.16670713006429,1.80823752868824,1.85851738039856,1.17357238645754,0.39061315453185,0.838874755405687,0.241584120826006,0.288030006257865,0.948033361884535,2.63542779877213,0.616265742988964,0.389762468933385,1.07416017400489,1.19208812868759,1.08175904567972,0.147689527174577,0.504832249740738,0.762068066549998,1.20991422164209,0.877120926657772,0.577271049841977,1.28564592399726,1.36038230169127,1.33191572024439,0.0897138566094757,0.335769232728157,5.21611903886914,1.12609485270709,0.73260649706906,1.07184189539533,1.50471631210609,14.6835479080437,10.5874804396651,13.7494923225455,6.35856774671644,13.0165678756422,9.82012066606611,7.42524750254986,11.2580300806055,7.25027854374727,9.31968561153276,0.62272408550506,1.19707462020309,0.682934423016537,1.94485373654635,1.46729213839588,0.551530525350042,1.33348036680969,1.64828045791115,1.60459604795908,0.505394423527595,2.28131369901216,2.07488975524684,1.21733959710847,1.15245274328765,0.689225627467359,0.952587382566147,1.15884325944855,1.54327376370964,0.824171801606613,0.294397840268795,2.05721551431249,1.77475806159337,0.953744759789284,1.59881058295561,1.50575008664529,1.09998990259179,1.82927972872773,1.05227884575137,1.7654534799962,1.68342681497322,1.42362021749009,0.886540341380071,1.22769312950907,1.54936841185966,0.964533054905707,1.74867404556562,1.63752125911786,1.93383948643468,1.72159498861959,1.98532277207564,1.62307484934295
|short_description=p5@Lmo4
}}
}}

Latest revision as of 18:03, 1 October 2015

Short description:p5@Lmo4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Lmo4_5end
Coexpression cluster:MCL_coexpression_mm9:2365
Association with transcript: -18bp_to_ENSMUST00000121112, NM_001161770, uc008rpm.1_5end
EntrezGene:Lmo4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Lmo4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.03
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.33
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D91.36
Mouse Schwann, donor2.CNhs12573.11746-123F92.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H13.04
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F17.54
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E811.36
hippocampus, neonate N00.CNhs11228.627-43G16.48
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.10
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.89
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.33
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.28
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E64.14
pituitary gland, embryo E13.CNhs11009.370-44C75.95
pituitary gland, embryo E14.CNhs11037.398-44A58.79
pituitary gland, embryo E15.CNhs10592.427-16B96.38
pituitary gland, embryo E16.CNhs11036.449-43F69.81
pituitary gland, embryo E17.CNhs11039.1265-44F57.08
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F83.75
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H31.87
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.74
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E41.21
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell4.94e-0944
neurectodermal cell4.94e-0944
neural cell1.34e-0843
electrically responsive cell1.69e-0739
electrically active cell1.69e-0739
autonomic neuron2.57e-079

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.04e-2495
ectoderm1.04e-2495
presumptive ectoderm1.04e-2495
nervous system1.01e-2175
central nervous system2.36e-2173
ecto-epithelium1.34e-1773
neurectoderm8.07e-1464
neural plate8.07e-1464
presumptive neural plate8.07e-1464
regional part of nervous system1.83e-1354
neural tube1.97e-1252
neural rod1.97e-1252
future spinal cord1.97e-1252
neural keel1.97e-1252
brain3.06e-1247
future brain3.06e-1247
anterior neural tube3.56e-1240
regional part of forebrain4.21e-1239
forebrain4.21e-1239
future forebrain4.21e-1239
regional part of brain6.13e-1246
pre-chordal neural plate1.33e-1149
structure with developmental contribution from neural crest3.10e-1192
regional part of cerebral cortex2.86e-1017
occipital lobe3.99e-0810
visual cortex3.99e-0810
neocortex3.99e-0810
gray matter4.69e-0834
cerebral cortex6.89e-0821
cerebral hemisphere6.89e-0821
pallium6.89e-0821
brain grey matter2.11e-0729
regional part of telencephalon2.11e-0729
telencephalon2.11e-0729
autonomic nervous system2.57e-079
peripheral nervous system2.95e-0711
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