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FFCP PHASE1:Mm9::chr16:20716232..20716239,-: Difference between revisions

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{{FFCP|EntrezGene=12724|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000153075_5end|description=CAGE_peak_3_at_Clcn2_5end|id=chr16:20716232..20716239,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,4.86e-08,23;CL:0000337,4.86e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.56e-17!73;UBERON:0005743!1.56e-17!73;UBERON:0000073!3.84e-16!75;UBERON:0001016!3.84e-16!75;UBERON:0001049!1.04e-15!52;UBERON:0005068!1.04e-15!52;UBERON:0006241!1.04e-15!52;UBERON:0007135!1.04e-15!52;UBERON:0000033!2.90e-15!63;UBERON:0002346!3.93e-15!71;UBERON:0003075!3.93e-15!71;UBERON:0007284!3.93e-15!71;UBERON:0002616!6.90e-15!49;UBERON:0000955!8.07e-15!50;UBERON:0006238!8.07e-15!50;UBERON:0003056!4.05e-13!49;UBERON:0004121!2.48e-12!102;UBERON:0000924!2.48e-12!102;UBERON:0006601!2.48e-12!102;UBERON:0003080!9.10e-12!40;UBERON:0002780!3.16e-11!39;UBERON:0001890!3.16e-11!39;UBERON:0006240!3.16e-11!39;UBERON:0002020!1.19e-09!34;UBERON:0002791!1.45e-07!29;UBERON:0003528!1.45e-07!29;UBERON:0001893!1.45e-07!29;UBERON:0007811!2.89e-07!86;UBERON:0000153!7.54e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.66e-23,73;UBERON:0000073,1.26e-22,54;UBERON:0001016,4.19e-22,75;UBERON:0002346,6.74e-20,64;UBERON:0003075,6.74e-20,64;UBERON:0007284,6.74e-20,64;UBERON:0001049,7.87e-20,52;UBERON:0005068,7.87e-20,52;UBERON:0006241,7.87e-20,52;UBERON:0007135,7.87e-20,52;UBERON:0004121,1.65e-18,95;UBERON:0000924,1.65e-18,95;UBERON:0006601,1.65e-18,95;UBERON:0010371,6.81e-17,73;UBERON:0002616,8.04e-17,46;UBERON:0000955,3.16e-16,47;UBERON:0006238,3.16e-16,47;UBERON:0003056,9.72e-15,49;UBERON:0003080,4.07e-14,40;UBERON:0002780,2.72e-13,39;UBERON:0001890,2.72e-13,39;UBERON:0006240,2.72e-13,39;UBERON:0010314,9.44e-12,92;UBERON:0002020,7.24e-11,34;UBERON:0003528,9.38e-08,29;UBERON:0002791,9.38e-08,29;UBERON:0001893,9.38e-08,29;UBERON:0002021,1.04e-07,10;UBERON:0000411,1.04e-07,10;UBERON:0001950,1.04e-07,10;UBERON:0001894,2.34e-07,10;UBERON:0006222,2.34e-07,10|phase1_expression=2.5623815536767,3.48975407639361,3.18499467572675,4.53696316960245,4.50806156951712,0.671517087647559,0.934450562382103,0,0,0.234064526321993,0.171217968225505,0,0,0.0874204024189974,0.999329285446988,1.01237633694913,0.699561878128147,0,0,0.42438965179803,0.850432901510698,0.198581902401771,0.261199789138935,1.11994695955385,1.60586496747019,0.57423196411502,1.29228598847722,0.861884930743556,1.71021077510736,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0.577703239502549,0.498703936075477,0.816677425049476,0,0,0,0,0,0,0,0.202753862439029,0.550640256485045,1.56478268869608,0.436050312760893,0.878744730937887,0.972149495371417,1.53985063787899,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,1.41621522601718,2.11596391708813,3.1691570175309,0.677689064138264,0.889294796111139,0,0,0,1.49800055259202,0.768436610643109,1.03689612308478,1.08004750665353,0.630974884054146,2.57085885963423,2.87129103237098,0.367472397644862,0.575072826109418,0,3.30347642998166,1.14918604276669,1.38245879930619,0.791317726381163,1.46380229763855,1.04182674111352,1.67509799400829,0.56276261003168,2.44477196442896,1.17851434189467,1.70846016958924,1.3047961207771,0.151452386666368,0,0.579728977403356,0.860423876981386,0,3.2382191498269,0.649776417447669,0.448026887097336,0.421333260395256,0.170430322578058,0.259786004602869,0,0.845060518660083,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.593768556259299,1.04091196059682,0.304465478312141,0,0.904335843315735,0.23517741427141,1.0053327306374,0,0.144599356919912,0,0,0.220841518460394,0,1.86391761218122,2.63502717310392,1.04723353406728,1.78819938646014,0.11981512450592,0,0.127070227073065,2.54644086988199,1.37250180845588,1.25654352112864,2.60736480288415,4.09144731728529,2.0778804455956,1.78465389374533,1.12023300235348,0.248813941220186,0.252722758433675,0,1.69156575851515,1.14951052216736,1.0803727788321,1.50704817835715,1.7009124787832,0.896796041993948,0.937017245597288,0.776110112217047,0,2.26927296201383,1.58356011747554,0.876782929710299,0.556094498451196,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0,2.73376933133365,0.617427674275707,2.31293148088659,1.05780226665418,1.2797295032114,1.16118335930219,0.77320476793256,0.80673409849337,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,1.32767530667157,0.685491075658373,1.1270773567308,0.610953983535943,0.581857461502877,0.701358198903186,0.632365371242573,0.147610147979602,0.627994911365499,0.370191491765402,0,0.667380422864376,0.393117990226406,0.674586337154561,0.811440485554012,1.20588579876208,0.50925170356284,0.287696137450811,0.1621352267750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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12724
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000153075_5end
|cluster_id=chr16:20716232..20716239,-
|description=CAGE_peak_3_at_Clcn2_5end
|id=chr16:20716232..20716239,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,4.86e-08,23;CL:0000337,4.86e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.56e-17!73;UBERON:0005743!1.56e-17!73;UBERON:0000073!3.84e-16!75;UBERON:0001016!3.84e-16!75;UBERON:0001049!1.04e-15!52;UBERON:0005068!1.04e-15!52;UBERON:0006241!1.04e-15!52;UBERON:0007135!1.04e-15!52;UBERON:0000033!2.90e-15!63;UBERON:0002346!3.93e-15!71;UBERON:0003075!3.93e-15!71;UBERON:0007284!3.93e-15!71;UBERON:0002616!6.90e-15!49;UBERON:0000955!8.07e-15!50;UBERON:0006238!8.07e-15!50;UBERON:0003056!4.05e-13!49;UBERON:0004121!2.48e-12!102;UBERON:0000924!2.48e-12!102;UBERON:0006601!2.48e-12!102;UBERON:0003080!9.10e-12!40;UBERON:0002780!3.16e-11!39;UBERON:0001890!3.16e-11!39;UBERON:0006240!3.16e-11!39;UBERON:0002020!1.19e-09!34;UBERON:0002791!1.45e-07!29;UBERON:0003528!1.45e-07!29;UBERON:0001893!1.45e-07!29;UBERON:0007811!2.89e-07!86;UBERON:0000153!7.54e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.66e-23,73;UBERON:0000073,1.26e-22,54;UBERON:0001016,4.19e-22,75;UBERON:0002346,6.74e-20,64;UBERON:0003075,6.74e-20,64;UBERON:0007284,6.74e-20,64;UBERON:0001049,7.87e-20,52;UBERON:0005068,7.87e-20,52;UBERON:0006241,7.87e-20,52;UBERON:0007135,7.87e-20,52;UBERON:0004121,1.65e-18,95;UBERON:0000924,1.65e-18,95;UBERON:0006601,1.65e-18,95;UBERON:0010371,6.81e-17,73;UBERON:0002616,8.04e-17,46;UBERON:0000955,3.16e-16,47;UBERON:0006238,3.16e-16,47;UBERON:0003056,9.72e-15,49;UBERON:0003080,4.07e-14,40;UBERON:0002780,2.72e-13,39;UBERON:0001890,2.72e-13,39;UBERON:0006240,2.72e-13,39;UBERON:0010314,9.44e-12,92;UBERON:0002020,7.24e-11,34;UBERON:0003528,9.38e-08,29;UBERON:0002791,9.38e-08,29;UBERON:0001893,9.38e-08,29;UBERON:0002021,1.04e-07,10;UBERON:0000411,1.04e-07,10;UBERON:0001950,1.04e-07,10;UBERON:0001894,2.34e-07,10;UBERON:0006222,2.34e-07,10
|phase1_expression=2.5623815536767,3.48975407639361,3.18499467572675,4.53696316960245,4.50806156951712,0.671517087647559,0.934450562382103,0,0,0.234064526321993,0.171217968225505,0,0,0.0874204024189974,0.999329285446988,1.01237633694913,0.699561878128147,0,0,0.42438965179803,0.850432901510698,0.198581902401771,0.261199789138935,1.11994695955385,1.60586496747019,0.57423196411502,1.29228598847722,0.861884930743556,1.71021077510736,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0.577703239502549,0.498703936075477,0.816677425049476,0,0,0,0,0,0,0,0.202753862439029,0.550640256485045,1.56478268869608,0.436050312760893,0.878744730937887,0.972149495371417,1.53985063787899,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,1.41621522601718,2.11596391708813,3.1691570175309,0.677689064138264,0.889294796111139,0,0,0,1.49800055259202,0.768436610643109,1.03689612308478,1.08004750665353,0.630974884054146,2.57085885963423,2.87129103237098,0.367472397644862,0.575072826109418,0,3.30347642998166,1.14918604276669,1.38245879930619,0.791317726381163,1.46380229763855,1.04182674111352,1.67509799400829,0.56276261003168,2.44477196442896,1.17851434189467,1.70846016958924,1.3047961207771,0.151452386666368,0,0.579728977403356,0.860423876981386,0,3.2382191498269,0.649776417447669,0.448026887097336,0.421333260395256,0.170430322578058,0.259786004602869,0,0.845060518660083,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.593768556259299,1.04091196059682,0.304465478312141,0,0.904335843315735,0.23517741427141,1.0053327306374,0,0.144599356919912,0,0,0.220841518460394,0,1.86391761218122,2.63502717310392,1.04723353406728,1.78819938646014,0.11981512450592,0,0.127070227073065,2.54644086988199,1.37250180845588,1.25654352112864,2.60736480288415,4.09144731728529,2.0778804455956,1.78465389374533,1.12023300235348,0.248813941220186,0.252722758433675,0,1.69156575851515,1.14951052216736,1.0803727788321,1.50704817835715,1.7009124787832,0.896796041993948,0.937017245597288,0.776110112217047,0,2.26927296201383,1.58356011747554,0.876782929710299,0.556094498451196,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0,2.73376933133365,0.617427674275707,2.31293148088659,1.05780226665418,1.2797295032114,1.16118335930219,0.77320476793256,0.80673409849337,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,1.32767530667157,0.685491075658373,1.1270773567308,0.610953983535943,0.581857461502877,0.701358198903186,0.632365371242573,0.147610147979602,0.627994911365499,0.370191491765402,0,0.667380422864376,0.393117990226406,0.674586337154561,0.811440485554012,1.20588579876208,0.50925170356284,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0.964887042726734,0.369506380333209,0.568474235311454,0.977789858652155,0.169745085775188,0.938760993154008,0.502518772325447,0.476087281772027,0,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,1.44495530989013,1.99259867206745,0,0,0,1.17131623288992,0.215423397732799,0.477937595905104,1.33679204449436,0.283076530788832,0.404810701674894,0.292255857911312,0,0.642642632843614,0.425820255624806,3.20518086601059,0.488660878060728,1.31976098378028,0,1.21390318077491,0.604647113929502,0.188605079755898,0.885905678642318,0,0.258428293168221,0.727067458955011,0,0,0,0,0.340439605753788,1.26042765821917,2.71653235943784,2.14337035031592,1.59606210278046,2.31879462882692,1.48094118541909,2.43571959291679,0,0.21183207086382,0.220528398054962,0.65954501176592,0,0.180938774784468,0.358117032009409,0,0.582961673259701,0.556275906031529,0.683483523191411,0.619160603889667,0.370389054739423,0.376736914009382,0.820165366326151,0.457556346413045,0.339956859987711,0,0.138199973804424,0.954670618015114,1.26534397432454,0.406638934253697,0.432021363287205,0.418176592028937,0.218362563746178,0.269728692769641,0.330613822901344,0,0.777689839750757,0,0,1.94371509857172,1.15820943319968,1.55560950675238,0.774958940866387,1.85851738039856,3.16864544343536,2.0832701575032,1.78260885523708,0.724752362478018,0.576060012515731,0.316011120628178,0.405450430580328,0.616265742988964,0.25984164595559,0.179026695667481,0,0.120195449519969,0.738447635872886,0.403865799792591,0.228620419965,0.302478555410522,0.584747284438515,0.577271049841977,0.233753804363138,0,0.221985953374065,0.448569283047378,0.335769232728157,0,0.563047426353546,0.549454872801795,0.214368379079066,0,2.25900737046827,1.84130094602871,2.86447756719698,1.03111909406213,0.685082519770642,3.0215755895588,2.70009000092722,1.35096360967266,1.81256963593682,4.14208249401456,0,2.79317411380722,1.87806966329548,0.729320151204882,0.628839487883947,0.735374033800057,0.888986911206461,1.23621034343337,0.64183841918363,0.758091635291392,0.760437899670719,0.188626341386076,0.749132059759059,0.768301828858431,0.918967503289812,0,0.463537303779422,0.38581844092741,0.824171801606613,0.883193520806384,1.02860775715625,0.887379030796687,0.238436189947321,0.436039249896986,0.846984423737976,0.592302255241736,0.548783918618318,0.526139422875686,0.950628796921032,1.68342681497322,0.711810108745045,0.689531376628944,0.818462086339379,0.464810523557898,0.578719832943424,1.49886346762768,0.467863216890817,0.429742108096597,0.191288332068843,0.661774257358546,0
|short_description=p3@Clcn2
}}

Latest revision as of 18:10, 1 October 2015

Short description:p3@Clcn2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Clcn2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000153075_5end
EntrezGene:Clcn2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Clcn2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B73.17
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.86e-0823
neuroblast (sensu Vertebrata)4.86e-0823

Uber anatomy
Ontology termp-valuen
central nervous system3.66e-2373
regional part of nervous system1.26e-2254
nervous system4.19e-2275
neurectoderm6.74e-2064
neural plate6.74e-2064
presumptive neural plate6.74e-2064
neural tube7.87e-2052
neural rod7.87e-2052
future spinal cord7.87e-2052
neural keel7.87e-2052
ectoderm-derived structure1.65e-1895
ectoderm1.65e-1895
presumptive ectoderm1.65e-1895
ecto-epithelium6.81e-1773
regional part of brain8.04e-1746
brain3.16e-1647
future brain3.16e-1647
pre-chordal neural plate9.72e-1549
anterior neural tube4.07e-1440
regional part of forebrain2.72e-1339
forebrain2.72e-1339
future forebrain2.72e-1339
structure with developmental contribution from neural crest9.44e-1292
gray matter7.24e-1134
brain grey matter9.38e-0829
regional part of telencephalon9.38e-0829
telencephalon9.38e-0829
occipital lobe1.04e-0710
visual cortex1.04e-0710
neocortex1.04e-0710
diencephalon2.34e-0710
future diencephalon2.34e-0710
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