FFCP PHASE1:Mm9::chr16:22657255..22657315,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110197 | |EntrezGene=110197 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3037 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C413,F2Z409,B1B183,Q570Z5,Q91WG7 | |UniProt=Q8C413,F2Z409,B1B183,Q570Z5,Q91WG7 | ||
|association_with_transcript=0bp_to_ENSMUST00000023578,ENSMUST00000137311,NM_138650,uc007ysg.2,uc007ysh.2_5end | |association_with_transcript=0bp_to_ENSMUST00000023578,ENSMUST00000137311,NM_138650,uc007ysg.2,uc007ysh.2_5end | ||
|cluster_id=chr16:22657255..22657315,- | |||
|description=CAGE_peak_1_at_Dgkg_5end | |description=CAGE_peak_1_at_Dgkg_5end | ||
|id=chr16:22657255..22657315,- | |id=chr16:22657255..22657315,- | ||
|ontology_enrichment_celltype=CL:0000540!2.70e-07!33;CL:0000047!2.70e-07!33;CL:0000031!2.70e-07!33;CL:0000404!2.70e-07!33 | |ontology_enrichment_celltype=CL:0000540!2.70e-07!33;CL:0000047!2.70e-07!33;CL:0000031!2.70e-07!33;CL:0000404!2.70e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.79e-07,33;CL:0000047,3.79e-07,33;CL:0000031,3.79e-07,33;CL:0000404,3.79e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.00e-17!73;UBERON:0005743!6.00e-17!73;UBERON:0000073!1.38e-15!75;UBERON:0001016!1.38e-15!75;UBERON:0000033!5.79e-15!63;UBERON:0002346!1.67e-14!71;UBERON:0003075!1.67e-14!71;UBERON:0007284!1.67e-14!71;UBERON:0007811!1.83e-14!86;UBERON:0001049!2.12e-14!52;UBERON:0005068!2.12e-14!52;UBERON:0006241!2.12e-14!52;UBERON:0007135!2.12e-14!52;UBERON:0000955!3.89e-14!50;UBERON:0006238!3.89e-14!50;UBERON:0002020!9.75e-14!34;UBERON:0002616!1.69e-13!49;UBERON:0004121!1.17e-12!102;UBERON:0000924!1.17e-12!102;UBERON:0006601!1.17e-12!102;UBERON:0002791!9.41e-12!29;UBERON:0003528!9.41e-12!29;UBERON:0001893!9.41e-12!29;UBERON:0000153!1.08e-11!94;UBERON:0000956!4.61e-11!21;UBERON:0001869!4.61e-11!21;UBERON:0000203!4.61e-11!21;UBERON:0003056!1.55e-10!49;UBERON:0003080!2.80e-10!40;UBERON:0002780!8.80e-10!39;UBERON:0001890!8.80e-10!39;UBERON:0006240!8.80e-10!39;UBERON:0002619!1.15e-09!17;UBERON:0002021!1.85e-07!10;UBERON:0000411!1.85e-07!10;UBERON:0001950!1.85e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!6.00e-17!73;UBERON:0005743!6.00e-17!73;UBERON:0000073!1.38e-15!75;UBERON:0001016!1.38e-15!75;UBERON:0000033!5.79e-15!63;UBERON:0002346!1.67e-14!71;UBERON:0003075!1.67e-14!71;UBERON:0007284!1.67e-14!71;UBERON:0007811!1.83e-14!86;UBERON:0001049!2.12e-14!52;UBERON:0005068!2.12e-14!52;UBERON:0006241!2.12e-14!52;UBERON:0007135!2.12e-14!52;UBERON:0000955!3.89e-14!50;UBERON:0006238!3.89e-14!50;UBERON:0002020!9.75e-14!34;UBERON:0002616!1.69e-13!49;UBERON:0004121!1.17e-12!102;UBERON:0000924!1.17e-12!102;UBERON:0006601!1.17e-12!102;UBERON:0002791!9.41e-12!29;UBERON:0003528!9.41e-12!29;UBERON:0001893!9.41e-12!29;UBERON:0000153!1.08e-11!94;UBERON:0000956!4.61e-11!21;UBERON:0001869!4.61e-11!21;UBERON:0000203!4.61e-11!21;UBERON:0003056!1.55e-10!49;UBERON:0003080!2.80e-10!40;UBERON:0002780!8.80e-10!39;UBERON:0001890!8.80e-10!39;UBERON:0006240!8.80e-10!39;UBERON:0002619!1.15e-09!17;UBERON:0002021!1.85e-07!10;UBERON:0000411!1.85e-07!10;UBERON:0001950!1.85e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.84e-18,73;UBERON:0001016,1.34e-16,75;UBERON:0000073,1.76e-16,54;UBERON:0002346,2.93e-15,64;UBERON:0003075,2.93e-15,64;UBERON:0007284,2.93e-15,64;UBERON:0001049,3.01e-15,52;UBERON:0005068,3.01e-15,52;UBERON:0006241,3.01e-15,52;UBERON:0007135,3.01e-15,52;UBERON:0002020,2.76e-14,34;UBERON:0000955,3.21e-13,47;UBERON:0006238,3.21e-13,47;UBERON:0004121,6.69e-13,95;UBERON:0000924,6.69e-13,95;UBERON:0006601,6.69e-13,95;UBERON:0002616,1.47e-12,46;UBERON:0003528,3.81e-12,29;UBERON:0002791,3.81e-12,29;UBERON:0001893,3.81e-12,29;UBERON:0000956,7.74e-12,21;UBERON:0001869,7.74e-12,21;UBERON:0000203,7.74e-12,21;UBERON:0010371,1.90e-11,73;UBERON:0003080,1.42e-10,40;UBERON:0002619,2.50e-10,17;UBERON:0003056,2.60e-10,49;UBERON:0002780,4.82e-10,39;UBERON:0001890,4.82e-10,39;UBERON:0006240,4.82e-10,39;UBERON:0010314,3.79e-08,92;UBERON:0002021,6.09e-08,10;UBERON:0000411,6.09e-08,10;UBERON:0001950,6.09e-08,10 | |||
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|phase1_expression=4.32401887182944,0,0,0,0,0.33575854382378,0.700837921786577,1.54947988129892,0.281577444303333,0.468129052643987,0.68487187290202,1.03703806693937,0.171200729931206,0.262261207256992,0.999329285446988,0.607425802169478,0,0.315462165358238,0.411343300817216,1.27316895539409,15.3077922271926,2.58156473122302,2.35079810225042,0,0.22940928106717,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,43.9458212273753,23.440060335714,35.5996145902183,45.8820560664191,51.9114568568419,46.1234835379596,0.503587271902309,0.202753862439029,0.367093504323363,0,4.57852828398938,9.00713349211335,19.6374198065026,1.1198913730029,0,0.167782606057736,2.90144856804538,0.336093799142464,0,0.286533439938757,0.515672092277442,0.404632921719196,2.64495489636016,0.633831403506179,0,0,0,0.988866362566974,0,1.19840044207362,2.68952813725088,4.25127410464758,4.3201900266141,3.78584930432488,12.5686433137674,13.9147180799517,4.28717797252339,2.68367318851062,2.75765635983006,40.7428759697738,33.326395240234,31.7965523840424,0.395658863190582,0.640413505216868,1.56274011167028,28.4766658981409,30.9519435517424,48.8954392885792,14.4368006882097,13.6676813567139,3.54158947068071,0.151452386666368,0.151143120213571,1.15945795480671,0,0,0,0,0,5.33688796500657,0,0,0,1.12674735821344,0,0,0,0,0,0,2.39786147410026,2.58937883647172,4.89859058913922,1.73485326766136,0.608930956624282,0,3.01445281105245,3.29248379979973,1.88499886994513,0,9.25435884287435,7.07688441559899,2.10296904931632,3.75430581382669,2.90925151881133,1.86391761218122,172.740670236813,196.670457697834,1.02182822083437,1.07833612055328,1.79970819298022,2.03312363316904,32.953940669061,50.3250663100489,3.01570445070875,58.4049715846049,49.0973678074235,30.7526305948149,48.5101376572595,0.407357455401265,4.10543003013307,3.79084137650512,3.78795340595653,0.780722657776222,0.919608417733892,1.98068342785884,1.20563854268572,3.33378845841506,3.84341160854549,2.15513966487376,8.01980449290949,0,0.189106080167819,0.175951124163949,0.43839146485515,0,1.39300866608867,0.823128545631774,0.199034266818493,4.21327912387941,2.57347907114715,3.6941254921427,0,0.469052119962192,0.36012412292203,0.23674473558521,0.393528463494808,0.925602677324269,0.697601834251224,0.804820204198858,1.05088808130453,0.329119699826961,2.29834449710733,0.729619285912702,1.90059983652932,0.439100230582101,0.671032093801859,198.093131547408,18.9344486777883,0,0.528901133327089,0.213288250535234,1.62565670302307,1.54640953586512,2.21851877085677,1.55664630691409,2.66315876557583,1.42358718463353,1.97638745668813,2.5133520880027,2.98434708061726,2.72949721966768,3.59527763461689,2.37751854862164,1.7922714592893,0.569003702859245,0.456994050438915,0,0.203651327845314,0.387904974335251,0.841629838683823,1.26473074248515,1.77132177575523,0.784993639206874,0.863780147452604,0,0.667380422864376,0.589676985339609,0.674586337154561,1.01430060694251,1.68824011826692,2.29163266603278,3.45235364940973,4.21551589615092,1.37280706594041,0,2.23284568601102,1.5601883655728,0,0,0,1.29327233116623,0.37898282354097,0.325929952884052,0.339490171550376,0.704070744865506,0.670025029767263,0.714130922658041,0.195133647857799,0.945810864637146,0.664394068946325,0.318909537314974,1.80249646187312,1.03610989119537,0.433947175744535,0,0,0,0,27.1330497079368,23.9111840648094,0,1.26235463602186,2.83957397474631,1.17131623288992,4.73931475012158,2.15071918157297,2.67358408898873,5.37845408498782,3.23848561339915,6.72188473196017,10.2774822266096,75.5105093591247,1.56134093729095,0.35613120733451,0.162886959353576,1.48473110675282,1.32745138339963,0.242780636154981,0,0.377210159511796,0.295301892880773,1.22974059177571,1.55056975900933,3.27180356529755,2.49548164869305,2.21225730555071,0,2.06271086496374,10.2131881726136,0.36012218806262,0.129358683782755,0.428674070063185,0.177340233642274,1.07021290561242,2.13913726782757,1.522324745573,0,0,3.52845436887939,0.49465875882444,0.484393280087717,0.542816324353403,0.358117032009409,0.492422699235184,3.20628920292836,27.999220603587,3.41741761595705,1.03193433981611,2.22233432843654,3.76736914009382,1.50363650493128,1.14389086603261,5.09935289981566,5.03825228365169,4.28419918793714,0.954670618015114,0.316335993581135,0.813277868507395,0.324016022465404,1.04544148007234,0.436725127492355,0.944050424693745,1.57041565878138,0.785267825952089,1.16653475962614,22.3682152711293,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.337912250981556,0.469428954583016,0.5208175393758,0.524296722128554,0,0.864090018773596,20.5407228408316,1.01362607645082,1.33524244314275,2.33857481360031,5.72885426135941,5.96044064343795,7.21172697119813,7.38447635872886,9.69277919502217,17.67997914396,12.5024469569682,14.7161399917026,15.2976828208124,31.9073942955683,2.0405734525369,0,0,0,2.70465431645067,16.7037403151552,2.93042598827624,1.92931541171159,8.52672576860118,35.0146142422581,36.365693684067,34.9466263198032,33.8550769217065,47.2706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| ||
|short_description=p1@Dgkg | |short_description=p1@Dgkg | ||
}} | }} |
Latest revision as of 18:45, 1 October 2015
Short description: | p1@Dgkg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dgkg_5end |
Coexpression cluster: | MCL_coexpression_mm9:3037 |
Association with transcript: | 0bp_to_ENSMUST00000023578, ENSMUST00000137311, NM_138650, uc007ysg.2, uc007ysh.2_5end |
EntrezGene: | Dgkg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.79e-07 | 33 |
neuronal stem cell | 3.79e-07 | 33 |
neuroblast | 3.79e-07 | 33 |
electrically signaling cell | 3.79e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.84e-18 | 73 |
nervous system | 1.34e-16 | 75 |
regional part of nervous system | 1.76e-16 | 54 |
neurectoderm | 2.93e-15 | 64 |
neural plate | 2.93e-15 | 64 |
presumptive neural plate | 2.93e-15 | 64 |
neural tube | 3.01e-15 | 52 |
neural rod | 3.01e-15 | 52 |
future spinal cord | 3.01e-15 | 52 |
neural keel | 3.01e-15 | 52 |
gray matter | 2.76e-14 | 34 |
brain | 3.21e-13 | 47 |
future brain | 3.21e-13 | 47 |
ectoderm-derived structure | 6.69e-13 | 95 |
ectoderm | 6.69e-13 | 95 |
presumptive ectoderm | 6.69e-13 | 95 |
regional part of brain | 1.47e-12 | 46 |
brain grey matter | 3.81e-12 | 29 |
regional part of telencephalon | 3.81e-12 | 29 |
telencephalon | 3.81e-12 | 29 |
cerebral cortex | 7.74e-12 | 21 |
cerebral hemisphere | 7.74e-12 | 21 |
pallium | 7.74e-12 | 21 |
ecto-epithelium | 1.90e-11 | 73 |
anterior neural tube | 1.42e-10 | 40 |
regional part of cerebral cortex | 2.50e-10 | 17 |
pre-chordal neural plate | 2.60e-10 | 49 |
regional part of forebrain | 4.82e-10 | 39 |
forebrain | 4.82e-10 | 39 |
future forebrain | 4.82e-10 | 39 |
structure with developmental contribution from neural crest | 3.79e-08 | 92 |
occipital lobe | 6.09e-08 | 10 |
visual cortex | 6.09e-08 | 10 |
neocortex | 6.09e-08 | 10 |