FFCP PHASE1:Mm9::chr5:121670256..121670283,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269700 | |EntrezGene=269700 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=E9PX61 | |UniProt=E9PX61 | ||
|association_with_transcript=28bp_to_ENSMUST00000119892,NM_181421_5end | |association_with_transcript=28bp_to_ENSMUST00000119892,NM_181421_5end | ||
|cluster_id=chr5:121670256..121670283,+ | |||
|description=CAGE_peak_2_at_Gm15800_5end | |description=CAGE_peak_2_at_Gm15800_5end | ||
|id=chr5:121670256..121670283,+ | |id=chr5:121670256..121670283,+ | ||
|ontology_enrichment_celltype=CL:0000117!5.51e-10!23;CL:0000337!5.51e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.48e-10,23;CL:0000337,5.48e-10,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.61e-13!52;UBERON:0005068!2.61e-13!52;UBERON:0006241!2.61e-13!52;UBERON:0007135!2.61e-13!52;UBERON:0000955!2.10e-12!50;UBERON:0006238!2.10e-12!50;UBERON:0002020!2.41e-12!34;UBERON:0002616!5.60e-12!49;UBERON:0001017!6.11e-12!73;UBERON:0005743!6.11e-12!73;UBERON:0000033!1.14e-11!63;UBERON:0007811!4.40e-11!86;UBERON:0000073!6.52e-11!75;UBERON:0001016!6.52e-11!75;UBERON:0003056!7.69e-11!49;UBERON:0003080!1.18e-10!40;UBERON:0002791!1.99e-10!29;UBERON:0003528!1.99e-10!29;UBERON:0001893!1.99e-10!29;UBERON:0002780!2.99e-10!39;UBERON:0001890!2.99e-10!39;UBERON:0006240!2.99e-10!39;UBERON:0002346!3.17e-10!71;UBERON:0003075!3.17e-10!71;UBERON:0007284!3.17e-10!71;UBERON:0000153!5.30e-09!94;UBERON:0004121!1.39e-07!102;UBERON:0000924!1.39e-07!102;UBERON:0006601!1.39e-07!102;UBERON:0000956!3.00e-07!21;UBERON:0001869!3.00e-07!21;UBERON:0000203!3.00e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.29e-14,54;UBERON:0001049,2.59e-13,52;UBERON:0005068,2.59e-13,52;UBERON:0006241,2.59e-13,52;UBERON:0007135,2.59e-13,52;UBERON:0002346,2.19e-12,64;UBERON:0003075,2.19e-12,64;UBERON:0007284,2.19e-12,64;UBERON:0002020,2.39e-12,34;UBERON:0001017,6.08e-12,73;UBERON:0000955,1.62e-11,47;UBERON:0006238,1.62e-11,47;UBERON:0002616,4.23e-11,46;UBERON:0001016,6.49e-11,75;UBERON:0003056,7.66e-11,49;UBERON:0003080,1.18e-10,40;UBERON:0003528,1.98e-10,29;UBERON:0002791,1.98e-10,29;UBERON:0001893,1.98e-10,29;UBERON:0002780,2.98e-10,39;UBERON:0001890,2.98e-10,39;UBERON:0006240,2.98e-10,39;UBERON:0010371,6.57e-10,73;UBERON:0004121,7.27e-09,95;UBERON:0000924,7.27e-09,95;UBERON:0006601,7.27e-09,95;UBERON:0011216,1.24e-07,194;UBERON:0000956,2.99e-07,21;UBERON:0001869,2.99e-07,21;UBERON:0000203,2.99e-07,21 | |||
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| ||
|short_description=p2@Gm15800 | |short_description=p2@Gm15800 | ||
}} | }} |
Latest revision as of 19:22, 1 October 2015
Short description: | p2@Gm15800 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm15800_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 28bp_to_ENSMUST00000119892, NM_181421_5end |
EntrezGene: | Gm15800 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.48e-10 | 23 |
neuroblast (sensu Vertebrata) | 5.48e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 6.29e-14 | 54 |
neural tube | 2.59e-13 | 52 |
neural rod | 2.59e-13 | 52 |
future spinal cord | 2.59e-13 | 52 |
neural keel | 2.59e-13 | 52 |
neurectoderm | 2.19e-12 | 64 |
neural plate | 2.19e-12 | 64 |
presumptive neural plate | 2.19e-12 | 64 |
gray matter | 2.39e-12 | 34 |
central nervous system | 6.08e-12 | 73 |
brain | 1.62e-11 | 47 |
future brain | 1.62e-11 | 47 |
regional part of brain | 4.23e-11 | 46 |
nervous system | 6.49e-11 | 75 |
pre-chordal neural plate | 7.66e-11 | 49 |
anterior neural tube | 1.18e-10 | 40 |
brain grey matter | 1.98e-10 | 29 |
regional part of telencephalon | 1.98e-10 | 29 |
telencephalon | 1.98e-10 | 29 |
regional part of forebrain | 2.98e-10 | 39 |
forebrain | 2.98e-10 | 39 |
future forebrain | 2.98e-10 | 39 |
ecto-epithelium | 6.57e-10 | 73 |
ectoderm-derived structure | 7.27e-09 | 95 |
ectoderm | 7.27e-09 | 95 |
presumptive ectoderm | 7.27e-09 | 95 |
organ system subdivision | 1.24e-07 | 194 |
cerebral cortex | 2.99e-07 | 21 |
cerebral hemisphere | 2.99e-07 | 21 |
pallium | 2.99e-07 | 21 |