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FFCP PHASE1:Mm9::chrX:20281034..20281035,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=236733
|EntrezGene=236733
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q3TFK2,Q8BX45,Q8C0C2,Q99K46
|UniProt=Q3TFK2,Q8BX45,Q8C0C2,Q99K46
|association_with_transcript=0bp_to_NM_145628,uc009stp.2,uc009stq.3_5end
|association_with_transcript=0bp_to_NM_145628,uc009stp.2,uc009stq.3_5end
|cluster_id=chrX:20281034..20281035,+
|description=CAGE_peak_2_at_Usp11_5end
|description=CAGE_peak_2_at_Usp11_5end
|id=chrX:20281034..20281035,+
|id=chrX:20281034..20281035,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,1.96e-07,23;CL:0000337,1.96e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.93e-17!71;UBERON:0003075!4.93e-17!71;UBERON:0007284!4.93e-17!71;UBERON:0000033!1.01e-15!63;UBERON:0000153!1.43e-15!94;UBERON:0004121!3.93e-15!102;UBERON:0000924!3.93e-15!102;UBERON:0006601!3.93e-15!102;UBERON:0001017!4.47e-15!73;UBERON:0005743!4.47e-15!73;UBERON:0000073!2.06e-14!75;UBERON:0001016!2.06e-14!75;UBERON:0007811!2.59e-14!86;UBERON:0001049!3.65e-14!52;UBERON:0005068!3.65e-14!52;UBERON:0006241!3.65e-14!52;UBERON:0007135!3.65e-14!52;UBERON:0003056!1.21e-13!49;UBERON:0000955!1.22e-13!50;UBERON:0006238!1.22e-13!50;UBERON:0002616!2.88e-13!49;UBERON:0003080!1.99e-11!40;UBERON:0002780!7.65e-11!39;UBERON:0001890!7.65e-11!39;UBERON:0006240!7.65e-11!39;UBERON:0002020!1.08e-07!34;UBERON:0002791!8.54e-07!29;UBERON:0003528!8.54e-07!29;UBERON:0001893!8.54e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.53e-16,54;UBERON:0002616,8.90e-14,46;UBERON:0001049,1.07e-13,52;UBERON:0005068,1.07e-13,52;UBERON:0006241,1.07e-13,52;UBERON:0007135,1.07e-13,52;UBERON:0000955,2.41e-13,47;UBERON:0006238,2.41e-13,47;UBERON:0001017,5.56e-13,73;UBERON:0001016,2.05e-12,75;UBERON:0003080,5.52e-12,40;UBERON:0002346,6.88e-12,64;UBERON:0003075,6.88e-12,64;UBERON:0007284,6.88e-12,64;UBERON:0003056,6.05e-11,49;UBERON:0002780,6.11e-11,39;UBERON:0001890,6.11e-11,39;UBERON:0006240,6.11e-11,39;UBERON:0004121,1.32e-10,95;UBERON:0000924,1.32e-10,95;UBERON:0006601,1.32e-10,95;UBERON:0010371,1.60e-10,73;UBERON:0010314,4.84e-09,92;UBERON:0001894,1.98e-07,10;UBERON:0006222,1.98e-07,10;UBERON:0002420,2.01e-07,8;UBERON:0007245,2.01e-07,8;UBERON:0010009,2.01e-07,8;UBERON:0010011,2.01e-07,8;UBERON:0000454,2.01e-07,8
|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,0.645616617207881,0,0,0.171217968225505,0,0.342401459862411,0,0,0,0,0.788655413395594,0.548457734422955,0,0.510259740906419,0.198581902401771,0.522399578277871,0,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0,0.183546752161682,0,0.65407546914134,0,0.194429899074283,0.279972843250725,0,0.335565212115473,0,0.336093799142464,0,0.286533439938757,0,1.21389876515759,2.11596391708813,0,0,0,0,0,0,0.599200221036809,0,1.14058573539325,1.08004750665353,0.630974884054146,1.14260393761521,1.10434270475807,0.734944795289724,0.766763768145891,0,0,2.80912143787413,1.68967186581868,1.84640802822271,1.37231465403614,0.52091337055676,1.3959149950069,0.56276261003168,2.90316670775939,0.294628585473668,0.854230084794618,0.559198337475902,0.075726193333184,0.226714680320357,0.579728977403356,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0.70667914902068,1.40843419776681,0,0,0,0.432982082022428,0,0,0,0,1.1875371125186,1.38788261412909,0.913396434936424,0.230615497256059,0.301445281105245,0.705532242814229,0.502666365318702,0.494389935468748,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,0.878342391034642,1.46612694769419,0.255457055208591,0.11981512450592,0,0.127070227073065,1.79748767285787,2.28750301409313,1.25654352112864,0.869121600961382,2.30143911597297,1.66230435647648,2.59586020908412,0.203678727700633,0.124406970610093,0,0.631325567659422,1.17108398666433,0.459804208866946,0.720248519221397,0.90422890701429,0.544291993210623,0.768682321709099,0.937017245597288,1.29351685369508,1.29340795759705,1.13463648100692,1.75951124163949,1.09597866213787,0.834141747676794,0.696504333044333,0,1.59227413454795,0.702213187313235,0,0.284163499395593,0.414251545071004,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,1.07309360559848,0.583826711835847,0.329119699826961,0,0,0.146199987425332,0,0.134206418760372,0.841159794256509,0.823236899034275,0.330418782983798,0.264450566663544,0.853153002140936,0.464473343720877,0.515469845288373,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.569003702859245,0.342745537829186,1.1270773567308,0.610953983535943,0.969762435838129,0.561086559122548,0.442655759869801,0.590440591918409,0.156998727841375,0,0,0.500535317148282,0,0,0.811440485554012,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.184753190166605,1.51593129416388,0.488894929326078,0.169745085775188,0.938760993154008,0.837531287209079,0.238043640886014,0.195133647857799,0.472905432318573,0.44292937929755,0.478364305972461,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0,1.44495530989013,1.87538698547525,0.491804836130026,0,0.631016438832513,0,0.430846795465598,1.19484398976276,0.668396022247182,0.849229592366497,0.404810701674894,0.876767573733936,0.790575555893047,0.963963949265421,0.425820255624806,0.890328018336276,0.488660878060728,0.164970122972535,0,0.971122544619926,1.81394134178851,0.377210159511796,1.18120757152309,0,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,1.70219802876894,1.26042765821917,1.4229455216103,1.50035924522115,0.886701168211368,0.891844088010353,0.329098041204242,1.2178597964584,0,0,0,0,0.322928853391811,0.241251699712623,0.238744688006273,0,0,0.927126510052548,0.341741761595705,0.412773735926445,0.370389054739423,0,0.27338845544205,0.686334519619568,1.18984900995699,1.11961161858926,0.829199842826543,0,0.790839983952838,0.609958401380546,0.648032044930808,0.209088296014469,0.436725127492355,0,0.247960367176008,0,0.129614973291793,0,0,1.34564891439581,0.66183396182839,0.972255941720238,0.774958940866387,0.168956125490778,1.17357238645754,0.39061315453185,0.838874755405687,0,0.288030006257865,0.316011120628178,0.608175645870493,1.1298205288131,1.29920822977795,1.61124026100733,0.39736270956253,1.08175904567972,0.443068581523732,0.908698049533329,0.609654453239999,0.705783295957884,1.16949456887703,0.962118416403295,0.701261413089414,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0,0.564751842617067,1.84130094602871,0.572895513439397,0.859265911718438,2.05524755931193,0.755393897389701,2.02506750069542,0.45032120322422,1.81256963593682,0,1.14166082342594,0,0.682934423016537,0.972426868273176,0.419226325255965,0.183843508450014,0.666740183404846,0.824140228955577,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.384150914429216,0.34461281373368,0.476293691283074,0,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0,1.1921809497366,0.145346416632329,0.282328141245992,0.507687647350059,0.73171189149109,0.526139422875686,0.407412341537585,0,1.06771516311757,0.492522411877817,1.22769312950907,1.23949472948773,0.578719832943424,0,0.233931608445408,0.644613162144895,0.382576664137687,0,0.231867835620421
|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,0.645616617207881,0,0,0.171217968225505,0,0.342401459862411,0,0,0,0,0.788655413395594,0.548457734422955,0,0.510259740906419,0.198581902401771,0.522399578277871,0,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0,0.183546752161682,0,0.65407546914134,0,0.194429899074283,0.279972843250725,0,0.335565212115473,0,0.336093799142464,0,0.286533439938757,0,1.21389876515759,2.11596391708813,0,0,0,0,0,0,0.599200221036809,0,1.14058573539325,1.08004750665353,0.630974884054146,1.14260393761521,1.10434270475807,0.734944795289724,0.766763768145891,0,0,2.80912143787413,1.68967186581868,1.84640802822271,1.37231465403614,0.52091337055676,1.3959149950069,0.56276261003168,2.90316670775939,0.294628585473668,0.854230084794618,0.559198337475902,0.075726193333184,0.226714680320357,0.579728977403356,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0.70667914902068,1.40843419776681,0,0,0,0.432982082022428,0,0,0,0,1.1875371125186,1.38788261412909,0.913396434936424,0.230615497256059,0.301445281105245,0.705532242814229,0.502666365318702,0.494389935468748,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,0.878342391034642,1.46612694769419,0.255457055208591,0.11981512450592,0,0.127070227073065,1.79748767285787,2.28750301409313,1.25654352112864,0.869121600961382,2.30143911597297,1.66230435647648,2.59586020908412,0.203678727700633,0.124406970610093,0,0.631325567659422,1.17108398666433,0.459804208866946,0.720248519221397,0.90422890701429,0.544291993210623,0.768682321709099,0.937017245597288,1.29351685369508,1.29340795759705,1.13463648100692,1.75951124163949,1.09597866213787,0.834141747676794,0.696504333044333,0,1.59227413454795,0.702213187313235,0,0.284163499395593,0.414251545071004,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,1.07309360559848,0.583826711835847,0.329119699826961,0,0,0.146199987425332,0,0.134206418760372,0.841159794256509,0.823236899034275,0.330418782983798,0.264450566663544,0.853153002140936,0.464473343720877,0.515469845288373,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.569003702859245,0.342745537829186,1.1270773567308,0.610953983535943,0.969762435838129,0.561086559122548,0.442655759869801,0.590440591918409,0.156998727841375,0,0,0.500535317148282,0,0,0.811440485554012,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.184753190166605,1.51593129416388,0.488894929326078,0.169745085775188,0.938760993154008,0.837531287209079,0.238043640886014,0.195133647857799,0.472905432318573,0.44292937929755,0.478364305972461,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0,1.44495530989013,1.87538698547525,0.491804836130026,0,0.631016438832513,0,0.430846795465598,1.19484398976276,0.668396022247182,0.849229592366497,0.404810701674894,0.876767573733936,0.790575555893047,0.963963949265421,0.425820255624806,0.890328018336276,0.488660878060728,0.164970122972535,0,0.971122544619926,1.81394134178851,0.377210159511796,1.18120757152309,0,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,1.70219802876894,1.26042765821917,1.4229455216103,1.50035924522115,0.886701168211368,0.891844088010353,0.329098041204242,1.2178597964584,0,0,0,0,0.322928853391811,0.241251699712623,0.238744688006273,0,0,0.927126510052548,0.341741761595705,0.412773735926445,0.370389054739423,0,0.27338845544205,0.686334519619568,1.18984900995699,1.11961161858926,0.829199842826543,0,0.790839983952838,0.609958401380546,0.648032044930808,0.209088296014469,0.436725127492355,0,0.247960367176008,0,0.129614973291793,0,0,1.34564891439581,0.66183396182839,0.972255941720238,0.774958940866387,0.168956125490778,1.17357238645754,0.39061315453185,0.838874755405687,0,0.288030006257865,0.316011120628178,0.608175645870493,1.1298205288131,1.29920822977795,1.61124026100733,0.39736270956253,1.08175904567972,0.443068581523732,0.908698049533329,0.609654453239999,0.705783295957884,1.16949456887703,0.962118416403295,0.701261413089414,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0,0.564751842617067,1.84130094602871,0.572895513439397,0.859265911718438,2.05524755931193,0.755393897389701,2.02506750069542,0.45032120322422,1.81256963593682,0,1.14166082342594,0,0.682934423016537,0.972426868273176,0.419226325255965,0.183843508450014,0.666740183404846,0.824140228955577,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.384150914429216,0.34461281373368,0.476293691283074,0,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0,1.1921809497366,0.145346416632329,0.282328141245992,0.507687647350059,0.73171189149109,0.526139422875686,0.407412341537585,0,1.06771516311757,0.492522411877817,1.22769312950907,1.23949472948773,0.578719832943424,0,0.233931608445408,0.644613162144895,0.382576664137687,0,0.231867835620421
|short_description=p2@Usp11
|short_description=p2@Usp11
}}
}}

Latest revision as of 19:28, 1 October 2015

Short description:p2@Usp11
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Usp11_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_145628, uc009stp.2, uc009stq.3_5end
EntrezGene:Usp11
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Usp11

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.96e-0723
neuroblast (sensu Vertebrata)1.96e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.53e-1654
regional part of brain8.90e-1446
neural tube1.07e-1352
neural rod1.07e-1352
future spinal cord1.07e-1352
neural keel1.07e-1352
brain2.41e-1347
future brain2.41e-1347
central nervous system5.56e-1373
nervous system2.05e-1275
anterior neural tube5.52e-1240
neurectoderm6.88e-1264
neural plate6.88e-1264
presumptive neural plate6.88e-1264
pre-chordal neural plate6.05e-1149
regional part of forebrain6.11e-1139
forebrain6.11e-1139
future forebrain6.11e-1139
ectoderm-derived structure1.32e-1095
ectoderm1.32e-1095
presumptive ectoderm1.32e-1095
ecto-epithelium1.60e-1073
structure with developmental contribution from neural crest4.84e-0992
diencephalon1.98e-0710
future diencephalon1.98e-0710
basal ganglion2.01e-078
nuclear complex of neuraxis2.01e-078
aggregate regional part of brain2.01e-078
collection of basal ganglia2.01e-078
cerebral subcortex2.01e-078
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