FFCP PHASE1:Mm9::chr1:95532269..95532288,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:95532269..95532288,- to FFCP PHASE1:Mm9::chr1:95532269..95532288,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=59041 | |EntrezGene=59041 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9Z2W1 | |UniProt=Q9Z2W1 | ||
|association_with_transcript=10bp_to_ENSMUST00000027498_5end | |||
|cluster_id=chr1:95532269..95532288,- | |||
|description=CAGE_peak_2_at_Stk25_5end | |||
|id=chr1:95532269..95532288,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.35e-14!52;UBERON:0005068!6.35e-14!52;UBERON:0006241!6.35e-14!52;UBERON:0007135!6.35e-14!52;UBERON:0000955!4.14e-13!50;UBERON:0006238!4.14e-13!50;UBERON:0002616!8.45e-13!49;UBERON:0001017!1.23e-11!73;UBERON:0005743!1.23e-11!73;UBERON:0003080!3.85e-11!40;UBERON:0000073!1.19e-10!75;UBERON:0001016!1.19e-10!75;UBERON:0002780!1.47e-10!39;UBERON:0001890!1.47e-10!39;UBERON:0006240!1.47e-10!39;UBERON:0000033!2.96e-10!63;UBERON:0002020!3.11e-10!34;UBERON:0002346!2.82e-09!71;UBERON:0003075!2.82e-09!71;UBERON:0007284!2.82e-09!71;UBERON:0003056!1.03e-08!49;UBERON:0002791!3.99e-08!29;UBERON:0003528!3.99e-08!29;UBERON:0001893!3.99e-08!29;UBERON:0004121!2.78e-07!102;UBERON:0000924!2.78e-07!102;UBERON:0006601!2.78e-07!102;UBERON:0002021!5.09e-07!10;UBERON:0000411!5.09e-07!10;UBERON:0001950!5.09e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.69e-15,54;UBERON:0001049,6.35e-14,52;UBERON:0005068,6.35e-14,52;UBERON:0006241,6.35e-14,52;UBERON:0007135,6.35e-14,52;UBERON:0001017,1.23e-11,73;UBERON:0000955,1.75e-11,47;UBERON:0006238,1.75e-11,47;UBERON:0002616,3.50e-11,46;UBERON:0003080,3.85e-11,40;UBERON:0001016,1.19e-10,75;UBERON:0002780,1.47e-10,39;UBERON:0001890,1.47e-10,39;UBERON:0006240,1.47e-10,39;UBERON:0002346,2.10e-10,64;UBERON:0003075,2.10e-10,64;UBERON:0007284,2.10e-10,64;UBERON:0002020,3.11e-10,34;UBERON:0003056,1.03e-08,49;UBERON:0010371,2.58e-08,73;UBERON:0003528,3.99e-08,29;UBERON:0002791,3.99e-08,29;UBERON:0001893,3.99e-08,29;UBERON:0004121,6.61e-08,95;UBERON:0000924,6.61e-08,95;UBERON:0006601,6.61e-08,95;UBERON:0010314,3.71e-07,92;UBERON:0002021,5.09e-07,10;UBERON:0000411,5.09e-07,10;UBERON:0001950,5.09e-07,10 | |||
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| ||
|short_description=p2@Stk25 | |||
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Latest revision as of 20:08, 1 October 2015
Short description: | p2@Stk25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Stk25_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENSMUST00000027498_5end |
EntrezGene: | Stk25 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.69e-15 | 54 |
neural tube | 6.35e-14 | 52 |
neural rod | 6.35e-14 | 52 |
future spinal cord | 6.35e-14 | 52 |
neural keel | 6.35e-14 | 52 |
central nervous system | 1.23e-11 | 73 |
brain | 1.75e-11 | 47 |
future brain | 1.75e-11 | 47 |
regional part of brain | 3.50e-11 | 46 |
anterior neural tube | 3.85e-11 | 40 |
nervous system | 1.19e-10 | 75 |
regional part of forebrain | 1.47e-10 | 39 |
forebrain | 1.47e-10 | 39 |
future forebrain | 1.47e-10 | 39 |
neurectoderm | 2.10e-10 | 64 |
neural plate | 2.10e-10 | 64 |
presumptive neural plate | 2.10e-10 | 64 |
gray matter | 3.11e-10 | 34 |
pre-chordal neural plate | 1.03e-08 | 49 |
ecto-epithelium | 2.58e-08 | 73 |
brain grey matter | 3.99e-08 | 29 |
regional part of telencephalon | 3.99e-08 | 29 |
telencephalon | 3.99e-08 | 29 |
ectoderm-derived structure | 6.61e-08 | 95 |
ectoderm | 6.61e-08 | 95 |
presumptive ectoderm | 6.61e-08 | 95 |
structure with developmental contribution from neural crest | 3.71e-07 | 92 |
occipital lobe | 5.09e-07 | 10 |
visual cortex | 5.09e-07 | 10 |
neocortex | 5.09e-07 | 10 |