FFCP PHASE1:Mm9::chrX:35954386..35954451,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68995 | |EntrezGene=68995 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DB27 | |UniProt=Q9DB27 | ||
|association_with_transcript=0bp_to_uc009tae.1,uc009taf.1_5end | |association_with_transcript=0bp_to_uc009tae.1,uc009taf.1_5end | ||
|cluster_id=chrX:35954386..35954451,+ | |||
|description=CAGE_peak_2_at_Mcts1_5end | |description=CAGE_peak_2_at_Mcts1_5end | ||
|id=chrX:35954386..35954451,+ | |id=chrX:35954386..35954451,+ | ||
|ontology_enrichment_celltype=CL:0000393!4.47e-11!39;CL:0000211!4.47e-11!39;CL:0000540!1.38e-09!33;CL:0000047!1.38e-09!33;CL:0000031!1.38e-09!33;CL:0000404!1.38e-09!33;CL:0000117!1.81e-07!23;CL:0000337!1.81e-07!23 | |ontology_enrichment_celltype=CL:0000393!4.47e-11!39;CL:0000211!4.47e-11!39;CL:0000540!1.38e-09!33;CL:0000047!1.38e-09!33;CL:0000031!1.38e-09!33;CL:0000404!1.38e-09!33;CL:0000117!1.81e-07!23;CL:0000337!1.81e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.43e-11,39;CL:0000211,4.43e-11,39;CL:0000540,1.37e-09,33;CL:0000047,1.37e-09,33;CL:0000031,1.37e-09,33;CL:0000404,1.37e-09,33;CL:0000117,1.79e-07,23;CL:0000337,1.79e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.95e-16!75;UBERON:0001016!1.95e-16!75;UBERON:0001017!2.33e-16!73;UBERON:0005743!2.33e-16!73;UBERON:0002346!7.98e-16!71;UBERON:0003075!7.98e-16!71;UBERON:0007284!7.98e-16!71;UBERON:0004121!1.04e-14!102;UBERON:0000924!1.04e-14!102;UBERON:0006601!1.04e-14!102;UBERON:0001049!2.87e-14!52;UBERON:0005068!2.87e-14!52;UBERON:0006241!2.87e-14!52;UBERON:0007135!2.87e-14!52;UBERON:0000955!3.30e-13!50;UBERON:0006238!3.30e-13!50;UBERON:0000033!8.74e-13!63;UBERON:0002616!9.78e-13!49;UBERON:0002020!1.14e-12!34;UBERON:0002791!4.13e-10!29;UBERON:0003528!4.13e-10!29;UBERON:0001893!4.13e-10!29;UBERON:0003056!4.83e-10!49;UBERON:0003080!5.62e-10!40;UBERON:0002780!2.16e-09!39;UBERON:0001890!2.16e-09!39;UBERON:0006240!2.16e-09!39;UBERON:0002021!1.61e-07!10;UBERON:0000411!1.61e-07!10;UBERON:0001950!1.61e-07!10;UBERON:0007811!2.18e-07!86;UBERON:0000956!8.77e-07!21;UBERON:0001869!8.77e-07!21;UBERON:0000203!8.77e-07!21 | |ontology_enrichment_uberon=UBERON:0000073!1.95e-16!75;UBERON:0001016!1.95e-16!75;UBERON:0001017!2.33e-16!73;UBERON:0005743!2.33e-16!73;UBERON:0002346!7.98e-16!71;UBERON:0003075!7.98e-16!71;UBERON:0007284!7.98e-16!71;UBERON:0004121!1.04e-14!102;UBERON:0000924!1.04e-14!102;UBERON:0006601!1.04e-14!102;UBERON:0001049!2.87e-14!52;UBERON:0005068!2.87e-14!52;UBERON:0006241!2.87e-14!52;UBERON:0007135!2.87e-14!52;UBERON:0000955!3.30e-13!50;UBERON:0006238!3.30e-13!50;UBERON:0000033!8.74e-13!63;UBERON:0002616!9.78e-13!49;UBERON:0002020!1.14e-12!34;UBERON:0002791!4.13e-10!29;UBERON:0003528!4.13e-10!29;UBERON:0001893!4.13e-10!29;UBERON:0003056!4.83e-10!49;UBERON:0003080!5.62e-10!40;UBERON:0002780!2.16e-09!39;UBERON:0001890!2.16e-09!39;UBERON:0006240!2.16e-09!39;UBERON:0002021!1.61e-07!10;UBERON:0000411!1.61e-07!10;UBERON:0001950!1.61e-07!10;UBERON:0007811!2.18e-07!86;UBERON:0000956!8.77e-07!21;UBERON:0001869!8.77e-07!21;UBERON:0000203!8.77e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.51e-18,92;UBERON:0001016,1.80e-16,75;UBERON:0001017,2.15e-16,73;UBERON:0000073,2.42e-15,54;UBERON:0002346,3.14e-15,64;UBERON:0003075,3.14e-15,64;UBERON:0007284,3.14e-15,64;UBERON:0001049,2.65e-14,52;UBERON:0005068,2.65e-14,52;UBERON:0006241,2.65e-14,52;UBERON:0007135,2.65e-14,52;UBERON:0004121,7.47e-14,95;UBERON:0000924,7.47e-14,95;UBERON:0006601,7.47e-14,95;UBERON:0010371,9.71e-13,73;UBERON:0002020,1.13e-12,34;UBERON:0000955,1.21e-11,47;UBERON:0006238,1.21e-11,47;UBERON:0002616,3.45e-11,46;UBERON:0003528,4.09e-10,29;UBERON:0002791,4.09e-10,29;UBERON:0001893,4.09e-10,29;UBERON:0003056,4.53e-10,49;UBERON:0003080,5.25e-10,40;UBERON:0002780,2.02e-09,39;UBERON:0001890,2.02e-09,39;UBERON:0006240,2.02e-09,39;UBERON:0002021,1.60e-07,10;UBERON:0000411,1.60e-07,10;UBERON:0001950,1.60e-07,10;UBERON:0000956,8.72e-07,21;UBERON:0001869,8.72e-07,21;UBERON:0000203,8.72e-07,21 | |||
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| ||
|short_description=p2@Mcts1 | |short_description=p2@Mcts1 | ||
}} | }} |
Latest revision as of 20:28, 1 October 2015
Short description: | p2@Mcts1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mcts1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_uc009tae.1, uc009taf.1_5end |
EntrezGene: | Mcts1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.43e-11 | 39 |
electrically active cell | 4.43e-11 | 39 |
neuron | 1.37e-09 | 33 |
neuronal stem cell | 1.37e-09 | 33 |
neuroblast | 1.37e-09 | 33 |
electrically signaling cell | 1.37e-09 | 33 |
CNS neuron (sensu Vertebrata) | 1.79e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.79e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 4.51e-18 | 92 |
nervous system | 1.80e-16 | 75 |
central nervous system | 2.15e-16 | 73 |
regional part of nervous system | 2.42e-15 | 54 |
neurectoderm | 3.14e-15 | 64 |
neural plate | 3.14e-15 | 64 |
presumptive neural plate | 3.14e-15 | 64 |
neural tube | 2.65e-14 | 52 |
neural rod | 2.65e-14 | 52 |
future spinal cord | 2.65e-14 | 52 |
neural keel | 2.65e-14 | 52 |
ectoderm-derived structure | 7.47e-14 | 95 |
ectoderm | 7.47e-14 | 95 |
presumptive ectoderm | 7.47e-14 | 95 |
ecto-epithelium | 9.71e-13 | 73 |
gray matter | 1.13e-12 | 34 |
brain | 1.21e-11 | 47 |
future brain | 1.21e-11 | 47 |
regional part of brain | 3.45e-11 | 46 |
brain grey matter | 4.09e-10 | 29 |
regional part of telencephalon | 4.09e-10 | 29 |
telencephalon | 4.09e-10 | 29 |
pre-chordal neural plate | 4.53e-10 | 49 |
anterior neural tube | 5.25e-10 | 40 |
regional part of forebrain | 2.02e-09 | 39 |
forebrain | 2.02e-09 | 39 |
future forebrain | 2.02e-09 | 39 |
occipital lobe | 1.60e-07 | 10 |
visual cortex | 1.60e-07 | 10 |
neocortex | 1.60e-07 | 10 |
cerebral cortex | 8.72e-07 | 21 |
cerebral hemisphere | 8.72e-07 | 21 |
pallium | 8.72e-07 | 21 |