FFCP PHASE1:Mm9::chr6:88824978..88825024,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319655 | |EntrezGene=319655 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CAE9 | |UniProt=Q8CAE9 | ||
|association_with_transcript=0bp_to_ENSMUST00000153852,uc009cvw.1_5end | |association_with_transcript=0bp_to_ENSMUST00000153852,uc009cvw.1_5end | ||
|cluster_id=chr6:88824978..88825024,- | |||
|description=CAGE_peak_1_at_Podxl2_5end | |description=CAGE_peak_1_at_Podxl2_5end | ||
|id=chr6:88824978..88825024,- | |id=chr6:88824978..88825024,- | ||
|ontology_enrichment_celltype=CL:0000540!1.96e-19!33;CL:0000047!1.96e-19!33;CL:0000031!1.96e-19!33;CL:0000404!1.96e-19!33;CL:0000221!1.32e-18!44;CL:0000133!1.32e-18!44;CL:0002319!1.74e-18!43;CL:0000393!1.62e-17!39;CL:0000211!1.62e-17!39;CL:0000055!3.61e-16!50;CL:0000117!7.12e-16!23;CL:0000337!7.12e-16!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.05e-19,33;CL:0000047,1.05e-19,33;CL:0000031,1.05e-19,33;CL:0000404,1.05e-19,33;CL:0000221,7.23e-19,44;CL:0000133,7.23e-19,44;CL:0002319,9.61e-19,43;CL:0000393,9.23e-18,39;CL:0000211,9.23e-18,39;CL:0000117,4.31e-16,23;CL:0000337,4.31e-16,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.24e-35!73;UBERON:0005743!5.24e-35!73;UBERON:0000073!1.03e-33!75;UBERON:0001016!1.03e-33!75;UBERON:0004121!2.48e-33!102;UBERON:0000924!2.48e-33!102;UBERON:0006601!2.48e-33!102;UBERON:0002346!2.54e-29!71;UBERON:0003075!2.54e-29!71;UBERON:0007284!2.54e-29!71;UBERON:0000033!1.72e-25!63;UBERON:0001049!1.98e-24!52;UBERON:0005068!1.98e-24!52;UBERON:0006241!1.98e-24!52;UBERON:0007135!1.98e-24!52;UBERON:0000955!4.76e-23!50;UBERON:0006238!4.76e-23!50;UBERON:0002616!1.84e-22!49;UBERON:0003056!5.94e-21!49;UBERON:0002020!6.61e-18!34;UBERON:0003080!1.04e-17!40;UBERON:0002780!4.51e-17!39;UBERON:0001890!4.51e-17!39;UBERON:0006240!4.51e-17!39;UBERON:0002791!9.29e-15!29;UBERON:0003528!9.29e-15!29;UBERON:0001893!9.29e-15!29;UBERON:0007811!3.65e-12!86;UBERON:0000153!4.13e-12!94;UBERON:0000956!7.64e-10!21;UBERON:0001869!7.64e-10!21;UBERON:0000203!7.64e-10!21;UBERON:0000468!1.71e-09!333;UBERON:0002619!1.50e-07!17;UBERON:0003076!2.48e-07!12;UBERON:0003057!2.48e-07!12;UBERON:0000025!2.90e-07!114;UBERON:0000922!6.69e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.61e-35,73;UBERON:0001016,3.32e-34,75;UBERON:0004121,6.86e-33,95;UBERON:0000924,6.86e-33,95;UBERON:0006601,6.86e-33,95;UBERON:0002346,8.41e-30,64;UBERON:0003075,8.41e-30,64;UBERON:0007284,8.41e-30,64;UBERON:0010371,7.42e-27,73;UBERON:0000073,3.21e-26,54;UBERON:0010314,1.78e-25,92;UBERON:0001049,8.85e-25,52;UBERON:0005068,8.85e-25,52;UBERON:0006241,8.85e-25,52;UBERON:0007135,8.85e-25,52;UBERON:0000955,2.33e-21,47;UBERON:0006238,2.33e-21,47;UBERON:0003056,3.00e-21,49;UBERON:0002616,8.94e-21,46;UBERON:0002020,3.72e-18,34;UBERON:0003080,5.87e-18,40;UBERON:0002780,2.61e-17,39;UBERON:0001890,2.61e-17,39;UBERON:0006240,2.61e-17,39;UBERON:0003528,5.85e-15,29;UBERON:0002791,5.85e-15,29;UBERON:0001893,5.85e-15,29;UBERON:0000956,5.71e-10,21;UBERON:0001869,5.71e-10,21;UBERON:0000203,5.71e-10,21;UBERON:0002619,1.22e-07,17;UBERON:0003076,2.02e-07,12;UBERON:0003057,2.02e-07,12;UBERON:0000922,3.91e-07,320;UBERON:0000025,6.23e-07,114 | |||
|phase1_expression=16.9757777931082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,11.6509307506966,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5753327099485,11.9624778839027,5.68994931701213,57.1145681374069,6.75877984779384,5.71184075109627,5.24960727500565,7.55926676776958,8.62515386189829,0,0,0,3.34437266846731,4.01146815914259,2.06268836910977,95.088736604011,84.1095657042532,113.455821227606,5.76035704517525,5.33576877666684,2.2497492932035,2.96659908770092,2.1314403448383,19.4740071836963,25.3584081512226,100.475234326915,87.6188539772672,81.1854350816335,84.5526913835259,66.4814308264357,54.0184424537947,45.3349077916258,68.0221902091416,55.0579404996944,72.6540953704718,73.7311359629969,72.801230827067,67.6093686221807,72.9278718779464,104.135258627515,120.993961156811,89.2341767016571,48.9083451886288,58.3723891276322,89.4717339961443,1.8931548333296,2.72057616384428,0.289864488701678,0,0,0.539703191637817,0,0,5.33688796500657,0,0,0,11.4083170019111,0,0,0,0,0,0,2.16949371466214,0,13.5082346548991,7.98032503124225,6.69824052286711,6.45723392316964,6.48107354376277,6.82014501387088,8.92232798440696,1.23597483867187,1.01219549843938,0,11.8089800461609,7.95029466457417,4.84875253135222,0,31.034764483224,44.4027018444525,0.766371165625774,0,0.599902730993408,0,71.4501349961004,21.5025283324754,85.0679963804092,27.1165939499951,37.0787413128979,51.3236470062113,37.3154905055843,13.4427960282417,5.10068579501381,2.52722758433675,7.78634866779954,9.75903322220278,22.7603083389138,17.2859644613135,24.866294942893,35.7191620544471,34.8469319174791,48.0689846991409,27.9399640398137,5.17363183038821,5.67318240503458,7.9178005873777,8.32943783224784,13.0682207136031,9.4028084960985,5.76189981942242,7.76233640592123,0,0,0,3.31401236056803,5.8631514995274,5.58192390529146,4.02466050494857,5.50939848892731,4.78228049950873,4.18561100550734,3.75582761959467,3.85325629811659,7.07607354627966,9.35754545250843,6.48550476366846,4.5321996101853,2.19550115291051,3.62357330653004,22.7113144449257,66.3734749846385,0,0,8.10495352033889,9.52170354627798,6.70110798874885,3.63030344322017,3.55804870151792,3.42406127002606,1.89811624617805,5.27036655116835,5.27803938480566,8.15721535368718,6.62877896205008,1.79763881730844,0.864552199498777,1.1948476395262,4.1726938209678,4.68418901699888,5.63538678365402,3.46207257337034,4.65485969202302,5.19005067188357,6.57659986092276,1.32849133181642,1.41298855057237,0.740382983530803,0,1.00107063429656,0.982794975566015,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0.549122826376163,0,2.23284568601102,1.24815069245824,2.02063102357689,0.538192240565737,0,0.554259570499814,8.7166049414423,4.88894929326078,3.73439188705414,3.52035372432753,3.1826188913945,1.42826184531608,1.75620283072019,5.51723004371669,9.52298165489732,9.40783135079174,2.94953966488328,3.7990696010497,2.89298117163023,0,0,0,0.275936746304732,61.8119771452999,67.2795081039246,0.327869890753351,15.4007265594668,19.8770178232242,21.8645696806118,35.329437228179,16.2498782607735,24.0622568008986,34.5353367562376,15.382806663646,29.2255857911312,29.6465833459893,45.9489482483184,2.55492153374884,12.6426578603751,12.5422958702254,6.92874516484649,1.32745138339963,3.64170954232472,5.13950046840077,2.26326095707078,3.54362271456927,2.45948118355142,3.6179961043551,3.99887102425256,4.9909632973861,3.79244109522979,0,0,6.46835250932197,8.46287141947158,15.3936833701478,12.6458850668639,11.1724347194632,18.5503570306153,12.8348236069654,28.6197052167723,0.938686832254841,0.63549621259146,1.32317038832977,1.31909002353184,8.23468576149118,6.03129249281559,6.08798954415996,4.43180429311665,1.7488850197791,54.8858893951109,0,8.04908785056568,2.59272338317596,0.941842285023455,0.27338845544205,0.228778173206523,0.169978429993855,0,0,0,6.32671987162271,6.30290348093231,5.07625101862466,8.36353184057875,3.49380101993884,5.12484516262319,6.69492991375221,2.35580347785627,0.90730481304255,0.621339313086926,1.69107881605257,4.33597983527538,3.97100377097034,5.44463327363333,7.62042958518613,6.08242051766801,6.10257640957921,5.7289929331338,8.28388820963116,3.14059357073808,2.88030006257865,0.948033361884535,2.63542779877213,1.84879722896689,0.77952493786677,1.07416017400489,0.596044064343795,2.04332264183947,2.80610101631697,1.71642964911851,3.20068587950999,3.52891647978942,3.21611006441183,3.2712026157712,3.27255326108393,1.81384306892169,0.221985953374065,0.0897138566094757,0,1.15913756419314,1.50145980360946,2.93042598827624,1.50057865355346,0.501572104035363,24.2843292325339,33.6037422650239,28.6447756719698,45.7129465034209,26.0331357512844,25.6833925112498,28.3509450097358,33.7740902418165,36.7045351277206,30.0300980816056,2.69847103718859,17.5570944296454,19.6343646617254,14.8295097411659,9.01336599300324,9.00833191405069,13.7792971237001,13.8043488350059,11.8740107548972,13.1402550117175,13.1809235942925,10.1858224348481,16.0126977773499,13.701382614642,15.8521894317493,18.0991602687568,17.614417543618,18.5192851645157,14.0109206273124,7.80154276712306,12.6861623382604,12.2458306249943,11.6833733074187,9.44751708110135,15.9985946706062,14.63832716526,15.1830217484401,10.7858581689516,19.1483800522665,8.97827634652382,16.8461725736327,20.3904278517416,11.867700251921,13.789378865551,10.6098636039628,37.9712078465678,15.2055545489515,15.2558448374292,7.26895661861605,7.94129108830256,6.95603506861264 | |phase1_expression=16.9757777931082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,11.6509307506966,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5753327099485,11.9624778839027,5.68994931701213,57.1145681374069,6.75877984779384,5.71184075109627,5.24960727500565,7.55926676776958,8.62515386189829,0,0,0,3.34437266846731,4.01146815914259,2.06268836910977,95.088736604011,84.1095657042532,113.455821227606,5.76035704517525,5.33576877666684,2.2497492932035,2.96659908770092,2.1314403448383,19.4740071836963,25.3584081512226,100.475234326915,87.6188539772672,81.1854350816335,84.5526913835259,66.4814308264357,54.0184424537947,45.3349077916258,68.0221902091416,55.0579404996944,72.6540953704718,73.7311359629969,72.801230827067,67.6093686221807,72.9278718779464,104.135258627515,120.993961156811,89.2341767016571,48.9083451886288,58.3723891276322,89.4717339961443,1.8931548333296,2.72057616384428,0.289864488701678,0,0,0.539703191637817,0,0,5.33688796500657,0,0,0,11.4083170019111,0,0,0,0,0,0,2.16949371466214,0,13.5082346548991,7.98032503124225,6.69824052286711,6.45723392316964,6.48107354376277,6.82014501387088,8.92232798440696,1.23597483867187,1.01219549843938,0,11.8089800461609,7.95029466457417,4.84875253135222,0,31.034764483224,44.4027018444525,0.766371165625774,0,0.599902730993408,0,71.4501349961004,21.5025283324754,85.0679963804092,27.1165939499951,37.0787413128979,51.3236470062113,37.3154905055843,13.4427960282417,5.10068579501381,2.52722758433675,7.78634866779954,9.75903322220278,22.7603083389138,17.2859644613135,24.866294942893,35.7191620544471,34.8469319174791,48.0689846991409,27.9399640398137,5.17363183038821,5.67318240503458,7.9178005873777,8.32943783224784,13.0682207136031,9.4028084960985,5.76189981942242,7.76233640592123,0,0,0,3.31401236056803,5.8631514995274,5.58192390529146,4.02466050494857,5.50939848892731,4.78228049950873,4.18561100550734,3.75582761959467,3.85325629811659,7.07607354627966,9.35754545250843,6.48550476366846,4.5321996101853,2.19550115291051,3.62357330653004,22.7113144449257,66.3734749846385,0,0,8.10495352033889,9.52170354627798,6.70110798874885,3.63030344322017,3.55804870151792,3.42406127002606,1.89811624617805,5.27036655116835,5.27803938480566,8.15721535368718,6.62877896205008,1.79763881730844,0.864552199498777,1.1948476395262,4.1726938209678,4.68418901699888,5.63538678365402,3.46207257337034,4.65485969202302,5.19005067188357,6.57659986092276,1.32849133181642,1.41298855057237,0.740382983530803,0,1.00107063429656,0.982794975566015,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0.549122826376163,0,2.23284568601102,1.24815069245824,2.02063102357689,0.538192240565737,0,0.554259570499814,8.7166049414423,4.88894929326078,3.73439188705414,3.52035372432753,3.1826188913945,1.42826184531608,1.75620283072019,5.51723004371669,9.52298165489732,9.40783135079174,2.94953966488328,3.7990696010497,2.89298117163023,0,0,0,0.275936746304732,61.8119771452999,67.2795081039246,0.327869890753351,15.4007265594668,19.8770178232242,21.8645696806118,35.329437228179,16.2498782607735,24.0622568008986,34.5353367562376,15.382806663646,29.2255857911312,29.6465833459893,45.9489482483184,2.55492153374884,12.6426578603751,12.5422958702254,6.92874516484649,1.32745138339963,3.64170954232472,5.13950046840077,2.26326095707078,3.54362271456927,2.45948118355142,3.6179961043551,3.99887102425256,4.9909632973861,3.79244109522979,0,0,6.46835250932197,8.46287141947158,15.3936833701478,12.6458850668639,11.1724347194632,18.5503570306153,12.8348236069654,28.6197052167723,0.938686832254841,0.63549621259146,1.32317038832977,1.31909002353184,8.23468576149118,6.03129249281559,6.08798954415996,4.43180429311665,1.7488850197791,54.8858893951109,0,8.04908785056568,2.59272338317596,0.941842285023455,0.27338845544205,0.228778173206523,0.169978429993855,0,0,0,6.32671987162271,6.30290348093231,5.07625101862466,8.36353184057875,3.49380101993884,5.12484516262319,6.69492991375221,2.35580347785627,0.90730481304255,0.621339313086926,1.69107881605257,4.33597983527538,3.97100377097034,5.44463327363333,7.62042958518613,6.08242051766801,6.10257640957921,5.7289929331338,8.28388820963116,3.14059357073808,2.88030006257865,0.948033361884535,2.63542779877213,1.84879722896689,0.77952493786677,1.07416017400489,0.596044064343795,2.04332264183947,2.80610101631697,1.71642964911851,3.20068587950999,3.52891647978942,3.21611006441183,3.2712026157712,3.27255326108393,1.81384306892169,0.221985953374065,0.0897138566094757,0,1.15913756419314,1.50145980360946,2.93042598827624,1.50057865355346,0.501572104035363,24.2843292325339,33.6037422650239,28.6447756719698,45.7129465034209,26.0331357512844,25.6833925112498,28.3509450097358,33.7740902418165,36.7045351277206,30.0300980816056,2.69847103718859,17.5570944296454,19.6343646617254,14.8295097411659,9.01336599300324,9.00833191405069,13.7792971237001,13.8043488350059,11.8740107548972,13.1402550117175,13.1809235942925,10.1858224348481,16.0126977773499,13.701382614642,15.8521894317493,18.0991602687568,17.614417543618,18.5192851645157,14.0109206273124,7.80154276712306,12.6861623382604,12.2458306249943,11.6833733074187,9.44751708110135,15.9985946706062,14.63832716526,15.1830217484401,10.7858581689516,19.1483800522665,8.97827634652382,16.8461725736327,20.3904278517416,11.867700251921,13.789378865551,10.6098636039628,37.9712078465678,15.2055545489515,15.2558448374292,7.26895661861605,7.94129108830256,6.95603506861264 | ||
|short_description=p1@Podxl2 | |short_description=p1@Podxl2 | ||
}} | }} |
Latest revision as of 21:30, 1 October 2015
Short description: | p1@Podxl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Podxl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000153852, uc009cvw.1_5end |
EntrezGene: | Podxl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.05e-19 | 33 |
neuronal stem cell | 1.05e-19 | 33 |
neuroblast | 1.05e-19 | 33 |
electrically signaling cell | 1.05e-19 | 33 |
ectodermal cell | 7.23e-19 | 44 |
neurectodermal cell | 7.23e-19 | 44 |
neural cell | 9.61e-19 | 43 |
electrically responsive cell | 9.23e-18 | 39 |
electrically active cell | 9.23e-18 | 39 |
CNS neuron (sensu Vertebrata) | 4.31e-16 | 23 |
neuroblast (sensu Vertebrata) | 4.31e-16 | 23 |