FFCP PHASE1:Mm9::chr2:106533342..106533435,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:106533342..106533435,+ to FFCP PHASE1:Mm9::chr2:106533342..106533435,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=77015 | |EntrezGene=77015 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2322 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CZJ0 | |UniProt=Q9CZJ0 | ||
|association_with_transcript=0bp_to_ENSMUST00000111063_5end | |||
|cluster_id=chr2:106533342..106533435,+ | |||
|description=CAGE_peak_2_at_Mpped2_5end | |||
|id=chr2:106533342..106533435,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.53e-12!23;CL:0000337!8.53e-12!23;CL:0000540!6.02e-10!33;CL:0000047!6.02e-10!33;CL:0000031!6.02e-10!33;CL:0000404!6.02e-10!33;CL:0002319!1.73e-08!43;CL:0000221!2.87e-08!44;CL:0000133!2.87e-08!44;CL:0000393!8.84e-07!39;CL:0000211!8.84e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.84e-13,23;CL:0000337,6.84e-13,23;CL:0000540,2.65e-09,33;CL:0000047,2.65e-09,33;CL:0000031,2.65e-09,33;CL:0000404,2.65e-09,33;CL:0002319,3.96e-08,43;CL:0000221,1.21e-07,44;CL:0000133,1.21e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.67e-19!73;UBERON:0005743!5.67e-19!73;UBERON:0002346!2.25e-18!71;UBERON:0003075!2.25e-18!71;UBERON:0007284!2.25e-18!71;UBERON:0000073!1.43e-17!75;UBERON:0001016!1.43e-17!75;UBERON:0001049!6.44e-17!52;UBERON:0005068!6.44e-17!52;UBERON:0006241!6.44e-17!52;UBERON:0007135!6.44e-17!52;UBERON:0000033!1.79e-16!63;UBERON:0004121!1.65e-15!102;UBERON:0000924!1.65e-15!102;UBERON:0006601!1.65e-15!102;UBERON:0003056!2.69e-15!49;UBERON:0000955!5.54e-15!50;UBERON:0006238!5.54e-15!50;UBERON:0002616!1.66e-14!49;UBERON:0003080!1.70e-13!40;UBERON:0002780!3.17e-13!39;UBERON:0001890!3.17e-13!39;UBERON:0006240!3.17e-13!39;UBERON:0002020!1.30e-12!34;UBERON:0000153!1.55e-11!94;UBERON:0002791!4.14e-10!29;UBERON:0003528!4.14e-10!29;UBERON:0001893!4.14e-10!29;UBERON:0007811!2.10e-09!86;UBERON:0000468!1.26e-08!333;UBERON:0000956!1.87e-07!21;UBERON:0001869!1.87e-07!21;UBERON:0000203!1.87e-07!21;UBERON:0000025!2.90e-07!114;UBERON:0004111!3.08e-07!122;UBERON:0000922!8.51e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.01e-22,92;UBERON:0002346,1.52e-19,64;UBERON:0003075,1.52e-19,64;UBERON:0007284,1.52e-19,64;UBERON:0001017,7.20e-19,73;UBERON:0000073,2.17e-18,54;UBERON:0001049,3.70e-18,52;UBERON:0005068,3.70e-18,52;UBERON:0006241,3.70e-18,52;UBERON:0007135,3.70e-18,52;UBERON:0001016,1.34e-17,75;UBERON:0003056,5.93e-16,49;UBERON:0000955,1.66e-15,47;UBERON:0006238,1.66e-15,47;UBERON:0002616,5.54e-15,46;UBERON:0010371,6.61e-15,73;UBERON:0003080,2.25e-14,40;UBERON:0004121,2.42e-14,95;UBERON:0000924,2.42e-14,95;UBERON:0006601,2.42e-14,95;UBERON:0002780,4.48e-14,39;UBERON:0001890,4.48e-14,39;UBERON:0006240,4.48e-14,39;UBERON:0002020,8.55e-14,34;UBERON:0003528,5.03e-11,29;UBERON:0002791,5.03e-11,29;UBERON:0001893,5.03e-11,29;UBERON:0000956,4.34e-08,21;UBERON:0001869,4.34e-08,21;UBERON:0000203,4.34e-08,21;UBERON:0000025,1.39e-07,114;UBERON:0004111,6.32e-07,122 | |||
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| ||
|short_description=p2@Mpped2 | |||
}} | }} |
Latest revision as of 22:31, 1 October 2015
Short description: | p2@Mpped2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mpped2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2322 |
Association with transcript: | 0bp_to_ENSMUST00000111063_5end |
EntrezGene: | Mpped2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.84e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.84e-13 | 23 |
neuron | 2.65e-09 | 33 |
neuronal stem cell | 2.65e-09 | 33 |
neuroblast | 2.65e-09 | 33 |
electrically signaling cell | 2.65e-09 | 33 |
neural cell | 3.96e-08 | 43 |
ectodermal cell | 1.21e-07 | 44 |
neurectodermal cell | 1.21e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 5.01e-22 | 92 |
neurectoderm | 1.52e-19 | 64 |
neural plate | 1.52e-19 | 64 |
presumptive neural plate | 1.52e-19 | 64 |
central nervous system | 7.20e-19 | 73 |
regional part of nervous system | 2.17e-18 | 54 |
neural tube | 3.70e-18 | 52 |
neural rod | 3.70e-18 | 52 |
future spinal cord | 3.70e-18 | 52 |
neural keel | 3.70e-18 | 52 |
nervous system | 1.34e-17 | 75 |
pre-chordal neural plate | 5.93e-16 | 49 |
brain | 1.66e-15 | 47 |
future brain | 1.66e-15 | 47 |
regional part of brain | 5.54e-15 | 46 |
ecto-epithelium | 6.61e-15 | 73 |
anterior neural tube | 2.25e-14 | 40 |
ectoderm-derived structure | 2.42e-14 | 95 |
ectoderm | 2.42e-14 | 95 |
presumptive ectoderm | 2.42e-14 | 95 |
regional part of forebrain | 4.48e-14 | 39 |
forebrain | 4.48e-14 | 39 |
future forebrain | 4.48e-14 | 39 |
gray matter | 8.55e-14 | 34 |
brain grey matter | 5.03e-11 | 29 |
regional part of telencephalon | 5.03e-11 | 29 |
telencephalon | 5.03e-11 | 29 |
cerebral cortex | 4.34e-08 | 21 |
cerebral hemisphere | 4.34e-08 | 21 |
pallium | 4.34e-08 | 21 |
tube | 1.39e-07 | 114 |
anatomical conduit | 6.32e-07 | 122 |