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FFCP PHASE1:Mm9::chr2:11093915..11093929,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18761
|EntrezGene=18761
|HGNC=
|HGNC=
|MCL_coexpression_id=40
|TSSclassifier=NA
|UniProt=Q8CAV6
|UniProt=Q8CAV6
|association_with_transcript=-7bp_to_ENSMUST00000102970_5end
|association_with_transcript=-7bp_to_ENSMUST00000102970_5end
|cluster_id=chr2:11093915..11093929,+
|description=CAGE_peak_7_at_Prkcq_5end
|description=CAGE_peak_7_at_Prkcq_5end
|id=chr2:11093915..11093929,+
|id=chr2:11093915..11093929,+
|ontology_enrichment_celltype=CL:0000791!1.80e-08!9;CL:0000789!1.80e-08!9;CL:0002420!1.80e-08!9;CL:0002419!1.80e-08!9;CL:0000790!1.80e-08!9;CL:0000624!1.10e-07!8
|ontology_enrichment_celltype=CL:0000791!1.80e-08!9;CL:0000789!1.80e-08!9;CL:0002420!1.80e-08!9;CL:0002419!1.80e-08!9;CL:0000790!1.80e-08!9;CL:0000624!1.10e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,5.41e-23,9;CL:0000789,5.41e-23,9;CL:0002420,5.41e-23,9;CL:0002419,5.41e-23,9;CL:0000790,5.41e-23,9;CL:0000624,1.48e-20,8;CL:0000084,1.85e-18,11;CL:0000827,1.85e-18,11;CL:0000838,9.25e-17,12;CL:0000893,1.03e-15,6;CL:0002489,1.03e-15,6;CL:0000898,1.03e-15,6;CL:0000809,1.03e-15,6;CL:0000810,1.03e-15,6;CL:0000895,1.03e-15,6;CL:0000808,1.03e-15,6;CL:0000894,1.03e-15,6;CL:0000806,1.03e-15,6;CL:0000807,1.03e-15,6;CL:0000805,1.03e-15,6;CL:0002425,1.03e-15,6;CL:0002436,1.03e-15,6;CL:0002427,1.03e-15,6;CL:0002428,1.03e-15,6;CL:0002429,1.03e-15,6;CL:0002433,1.03e-15,6;CL:0002431,1.03e-15,6;CL:0002432,1.03e-15,6;CL:0000542,2.53e-15,13;CL:0000051,2.53e-15,13;CL:0000738,2.89e-11,17;CL:0002087,2.89e-11,17;CL:0002031,1.46e-10,25;CL:0002612,5.30e-08,3;CL:0000988,1.02e-07,32;CL:0002032,1.02e-07,32;CL:0000037,1.02e-07,32;CL:0000837,1.02e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!2.23e-11!29;UBERON:0005057!8.60e-11!51;UBERON:0002370!3.68e-10!23;UBERON:0000974!3.68e-10!23;UBERON:0004807!3.68e-10!23;UBERON:0005058!3.68e-10!23;UBERON:0003351!3.68e-10!23;UBERON:0009113!3.68e-10!23;UBERON:0003295!3.68e-10!23;UBERON:0009722!3.68e-10!23;UBERON:0005562!3.68e-10!23;UBERON:0007690!3.68e-10!23;UBERON:0006562!2.49e-09!24;UBERON:0003408!2.49e-09!24;UBERON:0001557!2.49e-09!24;UBERON:0001042!2.49e-09!24;UBERON:0008814!2.49e-09!24;UBERON:0009145!2.49e-09!24;UBERON:0000065!4.61e-08!41;UBERON:0002405!9.28e-08!70;UBERON:0001004!1.38e-07!42;UBERON:0000072!2.88e-07!27;UBERON:0005911!5.24e-07!69;UBERON:0002193!8.00e-07!48
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.09e-20,23;UBERON:0000974,1.09e-20,23;UBERON:0004807,1.09e-20,23;UBERON:0005058,1.09e-20,23;UBERON:0003351,1.09e-20,23;UBERON:0009113,1.09e-20,23;UBERON:0003295,1.09e-20,23;UBERON:0009722,1.09e-20,23;UBERON:0005562,1.09e-20,23;UBERON:0007690,1.09e-20,23;UBERON:0004177,2.54e-20,29;UBERON:0005057,2.54e-20,29;UBERON:0006562,1.12e-19,24;UBERON:0003408,1.12e-19,24;UBERON:0001557,1.12e-19,24;UBERON:0001042,1.12e-19,24;UBERON:0008814,1.12e-19,24;UBERON:0009145,1.12e-19,24;UBERON:0000072,4.33e-17,27;UBERON:0000077,3.92e-16,35;UBERON:0002193,1.12e-15,48;UBERON:0002405,1.12e-15,48;UBERON:0002390,4.64e-15,45;UBERON:0003061,4.64e-15,45;UBERON:0007811,1.39e-13,36;UBERON:0000065,1.53e-11,41;UBERON:0001004,3.52e-11,42;UBERON:0000153,9.21e-11,43;UBERON:0003929,1.02e-08,55;UBERON:0001948,4.50e-08,5;UBERON:0002315,4.50e-08,5;UBERON:0002257,5.30e-08,3;UBERON:0002368,1.13e-07,60;UBERON:0000490,1.52e-07,66;UBERON:0001041,2.94e-07,80;UBERON:0005911,4.34e-07,69;UBERON:0002530,8.52e-07,65
|phase1_expression=0.160148847104794,0,0,0,0,0,0,13.1705789910408,2.39340827657833,6.55380673701582,2.91070545983358,3.98860794976682,15.5792664237397,13.8998439846206,0.333109761815663,0.202475267389826,0,1.89277299214943,2.33094537129756,0.42438965179803,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,10.1550699881588,11.0910953717013,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0.571301968807607,2.20868540951614,0.122490799214954,0,1.83843757322004,2.20231761998777,0.638436690425939,0.307213066512487,0,0.274462930807229,0,0,0.56276261003168,0,3.83017161115768,1.85083185038834,2.23679334990361,0.530083353332288,0.226714680320357,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0.22836775943812,6.21450920753212,0,0,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0.662524555381181,0.969750506270444,1.86391761218122,0,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0,0,0,0.173824320192276,0.255715457330331,0.41557608911912,0.486723789203273,0,0.248813941220186,0,0.841767423545896,0.130120442962704,0.459804208866946,0.540186389416048,0.150704817835715,0.476255494059295,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,1.20149420536089,1.47610147979602,0.470996183524124,0.616985819609003,0.296452627087149,1.00107063429656,0.589676985339609,0,0.811440485554012,0.72353147925725,0,0.287696137450811,0.162135226775035,0.549122826376163,1.43768206527355,0.744281895337007,0,0.252578877947112,0.538192240565737,0,1.47802552133284,0.189491411770485,0,0.339490171550376,0,0,0.238043640886014,0,0.945810864637146,0.44292937929755,0.478364305972461,0.655453258862952,0.690739927463582,0.578596234326046,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0.404810701674894,0.584511715822624,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0.36012218806262,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.716234064018819,1.31312719796049,0,0.556275906031529,1.53783792718067,0,0.370389054739423,0.376736914009382,0.683471138605126,1.60144721244566,0.169978429993855,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,2.21207784439725,0.202725215290164,0.924398614483445,0.77952493786677,0.716106782669926,0.39736270956253,2.28371354087941,1.77227432609493,1.9183625490148,1.37172251979,1.31074040677893,2.43644701849381,1.05833025804362,1.98690733708667,0,0,0,0,0.386379188064381,0,0,0,0,1.12950368523413,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.367687016900028,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.280924522409647,0.448176066834085,0.229741875822453,0,0.231768651889711,0,0,0.588795680537589,0.685738504770831,0.177475806159338,0.715308569841963,0.290692833264657,0.282328141245992,0.423073039458382,0.73171189149109,0.263069711437843,0.407412341537585,0.561142271657738,0.474540072496697,0.788035859004508,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0.191288332068843,0.882365676478062,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0,0,0,0,13.1705789910408,2.39340827657833,6.55380673701582,2.91070545983358,3.98860794976682,15.5792664237397,13.8998439846206,0.333109761815663,0.202475267389826,0,1.89277299214943,2.33094537129756,0.42438965179803,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,10.1550699881588,11.0910953717013,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0.571301968807607,2.20868540951614,0.122490799214954,0,1.83843757322004,2.20231761998777,0.638436690425939,0.307213066512487,0,0.274462930807229,0,0,0.56276261003168,0,3.83017161115768,1.85083185038834,2.23679334990361,0.530083353332288,0.226714680320357,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0.22836775943812,6.21450920753212,0,0,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0.662524555381181,0.969750506270444,1.86391761218122,0,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0,0,0,0.173824320192276,0.255715457330331,0.41557608911912,0.486723789203273,0,0.248813941220186,0,0.841767423545896,0.130120442962704,0.459804208866946,0.540186389416048,0.150704817835715,0.476255494059295,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,1.20149420536089,1.47610147979602,0.470996183524124,0.616985819609003,0.296452627087149,1.00107063429656,0.589676985339609,0,0.811440485554012,0.72353147925725,0,0.287696137450811,0.162135226775035,0.549122826376163,1.43768206527355,0.744281895337007,0,0.252578877947112,0.538192240565737,0,1.47802552133284,0.189491411770485,0,0.339490171550376,0,0,0.238043640886014,0,0.945810864637146,0.44292937929755,0.478364305972461,0.655453258862952,0.690739927463582,0.578596234326046,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0.404810701674894,0.584511715822624,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0.36012218806262,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.716234064018819,1.31312719796049,0,0.556275906031529,1.53783792718067,0,0.370389054739423,0.376736914009382,0.683471138605126,1.60144721244566,0.169978429993855,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,2.21207784439725,0.202725215290164,0.924398614483445,0.77952493786677,0.716106782669926,0.39736270956253,2.28371354087941,1.77227432609493,1.9183625490148,1.37172251979,1.31074040677893,2.43644701849381,1.05833025804362,1.98690733708667,0,0,0,0,0.386379188064381,0,0,0,0,1.12950368523413,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.367687016900028,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.280924522409647,0.448176066834085,0.229741875822453,0,0.231768651889711,0,0,0.588795680537589,0.685738504770831,0.177475806159338,0.715308569841963,0.290692833264657,0.282328141245992,0.423073039458382,0.73171189149109,0.263069711437843,0.407412341537585,0.561142271657738,0.474540072496697,0.788035859004508,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0.191288332068843,0.882365676478062,0.695603506861264
|short_description=p7@Prkcq
|short_description=p7@Prkcq
}}
}}

Latest revision as of 23:02, 1 October 2015

Short description:p7@Prkcq
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Prkcq_5end
Coexpression cluster:MCL_coexpression_mm9:40
Association with transcript: -7bp_to_ENSMUST00000102970_5end
EntrezGene:Prkcq
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Prkcq

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.58
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.90
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.09
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H96.21
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A22.44
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell5.41e-239
alpha-beta T cell5.41e-239
immature T cell5.41e-239
mature T cell5.41e-239
immature alpha-beta T cell5.41e-239
CD4-positive, alpha-beta T cell1.48e-208
T cell1.85e-1811
pro-T cell1.85e-1811
lymphoid lineage restricted progenitor cell9.25e-1712
thymocyte1.03e-156
double negative thymocyte1.03e-156
naive T cell1.03e-156
double-positive, alpha-beta thymocyte1.03e-156
CD4-positive, alpha-beta thymocyte1.03e-156
naive thymus-derived CD4-positive, alpha-beta T cell1.03e-156
DN4 thymocyte1.03e-156
DN1 thymic pro-T cell1.03e-156
DN2 thymocyte1.03e-156
DN3 thymocyte1.03e-156
immature single positive thymocyte1.03e-156
early T lineage precursor1.03e-156
mature CD4 single-positive thymocyte1.03e-156
resting double-positive thymocyte1.03e-156
double-positive blast1.03e-156
CD69-positive double-positive thymocyte1.03e-156
CD69-positive, CD4-positive single-positive thymocyte1.03e-156
CD4-positive, CD8-intermediate double-positive thymocyte1.03e-156
CD24-positive, CD4 single-positive thymocyte1.03e-156
lymphocyte2.53e-1513
common lymphoid progenitor2.53e-1513
leukocyte2.89e-1117
nongranular leukocyte2.89e-1117
hematopoietic lineage restricted progenitor cell1.46e-1025
neuron of the ventral spinal cord5.30e-083
hematopoietic cell1.02e-0732
hematopoietic oligopotent progenitor cell1.02e-0732
hematopoietic stem cell1.02e-0732
hematopoietic multipotent progenitor cell1.02e-0732

Uber anatomy
Ontology termp-valuen
thymus1.09e-2023
neck1.09e-2023
respiratory system epithelium1.09e-2023
hemolymphoid system gland1.09e-2023
pharyngeal epithelium1.09e-2023
thymic region1.09e-2023
pharyngeal gland1.09e-2023
entire pharyngeal arch endoderm1.09e-2023
thymus primordium1.09e-2023
early pharyngeal endoderm1.09e-2023
hemopoietic organ2.54e-2029
immune organ2.54e-2029
pharynx1.12e-1924
gland of gut1.12e-1924
upper respiratory tract1.12e-1924
chordate pharynx1.12e-1924
pharyngeal arch system1.12e-1924
pharyngeal region of foregut1.12e-1924
segment of respiratory tract4.33e-1727
mixed endoderm/mesoderm-derived structure3.92e-1635
hemolymphoid system1.12e-1548
immune system1.12e-1548
hematopoietic system4.64e-1545
blood island4.64e-1545
craniocervical region1.39e-1336
respiratory tract1.53e-1141
respiratory system3.52e-1142
anterior region of body9.21e-1143
gut epithelium1.02e-0855
regional part of spinal cord4.50e-085
gray matter of spinal cord4.50e-085
ventral horn of spinal cord5.30e-083
endocrine gland1.13e-0760
unilaminar epithelium1.52e-0766
foregut2.94e-0780
endo-epithelium4.34e-0769
gland8.52e-0765
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