FFCP PHASE1:Mm9::chr19:21346747..21346753,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22682 | |EntrezGene=22682 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=O88878 | |UniProt=O88878 | ||
|association_with_transcript=-14bp_to_ENSMUST00000025659,NM_009551,uc008gyw.1_5end | |association_with_transcript=-14bp_to_ENSMUST00000025659,NM_009551,uc008gyw.1_5end | ||
|cluster_id=chr19:21346747..21346753,+ | |||
|description=CAGE_peak_2_at_Zfand5_5end | |description=CAGE_peak_2_at_Zfand5_5end | ||
|id=chr19:21346747..21346753,+ | |id=chr19:21346747..21346753,+ | ||
|ontology_enrichment_celltype=CL:0000117!7.96e-10!23;CL:0000337!7.96e-10!23;CL:0000540!2.55e-07!33;CL:0000047!2.55e-07!33;CL:0000031!2.55e-07!33;CL:0000404!2.55e-07!33 | |ontology_enrichment_celltype=CL:0000117!7.96e-10!23;CL:0000337!7.96e-10!23;CL:0000540!2.55e-07!33;CL:0000047!2.55e-07!33;CL:0000031!2.55e-07!33;CL:0000404!2.55e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.96e-10,23;CL:0000337,7.96e-10,23;CL:0000540,2.55e-07,33;CL:0000047,2.55e-07,33;CL:0000031,2.55e-07,33;CL:0000404,2.55e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.08e-14!34;UBERON:0001049!8.57e-14!52;UBERON:0005068!8.57e-14!52;UBERON:0006241!8.57e-14!52;UBERON:0007135!8.57e-14!52;UBERON:0000955!2.85e-13!50;UBERON:0006238!2.85e-13!50;UBERON:0002791!9.52e-13!29;UBERON:0003528!9.52e-13!29;UBERON:0001893!9.52e-13!29;UBERON:0002616!1.14e-12!49;UBERON:0000073!2.91e-12!75;UBERON:0001016!2.91e-12!75;UBERON:0007811!4.75e-12!86;UBERON:0002346!6.12e-12!71;UBERON:0003075!6.12e-12!71;UBERON:0007284!6.12e-12!71;UBERON:0001017!8.46e-12!73;UBERON:0005743!8.46e-12!73;UBERON:0000033!1.02e-11!63;UBERON:0004121!6.14e-11!102;UBERON:0000924!6.14e-11!102;UBERON:0006601!6.14e-11!102;UBERON:0003080!7.72e-11!40;UBERON:0000153!1.75e-10!94;UBERON:0002780!2.59e-10!39;UBERON:0001890!2.59e-10!39;UBERON:0006240!2.59e-10!39;UBERON:0003056!3.69e-09!49;UBERON:0000956!5.72e-09!21;UBERON:0001869!5.72e-09!21;UBERON:0000203!5.72e-09!21;UBERON:0002021!8.10e-08!10;UBERON:0000411!8.10e-08!10;UBERON:0001950!8.10e-08!10;UBERON:0000064!1.39e-07!99;UBERON:0002619!3.04e-07!17 | |ontology_enrichment_uberon=UBERON:0002020!1.08e-14!34;UBERON:0001049!8.57e-14!52;UBERON:0005068!8.57e-14!52;UBERON:0006241!8.57e-14!52;UBERON:0007135!8.57e-14!52;UBERON:0000955!2.85e-13!50;UBERON:0006238!2.85e-13!50;UBERON:0002791!9.52e-13!29;UBERON:0003528!9.52e-13!29;UBERON:0001893!9.52e-13!29;UBERON:0002616!1.14e-12!49;UBERON:0000073!2.91e-12!75;UBERON:0001016!2.91e-12!75;UBERON:0007811!4.75e-12!86;UBERON:0002346!6.12e-12!71;UBERON:0003075!6.12e-12!71;UBERON:0007284!6.12e-12!71;UBERON:0001017!8.46e-12!73;UBERON:0005743!8.46e-12!73;UBERON:0000033!1.02e-11!63;UBERON:0004121!6.14e-11!102;UBERON:0000924!6.14e-11!102;UBERON:0006601!6.14e-11!102;UBERON:0003080!7.72e-11!40;UBERON:0000153!1.75e-10!94;UBERON:0002780!2.59e-10!39;UBERON:0001890!2.59e-10!39;UBERON:0006240!2.59e-10!39;UBERON:0003056!3.69e-09!49;UBERON:0000956!5.72e-09!21;UBERON:0001869!5.72e-09!21;UBERON:0000203!5.72e-09!21;UBERON:0002021!8.10e-08!10;UBERON:0000411!8.10e-08!10;UBERON:0001950!8.10e-08!10;UBERON:0000064!1.39e-07!99;UBERON:0002619!3.04e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.08e-14,34;UBERON:0000073,1.22e-14,54;UBERON:0001049,8.57e-14,52;UBERON:0005068,8.57e-14,52;UBERON:0006241,8.57e-14,52;UBERON:0007135,8.57e-14,52;UBERON:0003528,9.52e-13,29;UBERON:0002791,9.52e-13,29;UBERON:0001893,9.52e-13,29;UBERON:0001016,2.90e-12,75;UBERON:0000955,6.42e-12,47;UBERON:0006238,6.42e-12,47;UBERON:0001017,8.43e-12,73;UBERON:0002616,2.47e-11,46;UBERON:0002346,4.17e-11,64;UBERON:0003075,4.17e-11,64;UBERON:0007284,4.17e-11,64;UBERON:0003080,7.72e-11,40;UBERON:0010371,2.18e-10,73;UBERON:0002780,2.59e-10,39;UBERON:0001890,2.59e-10,39;UBERON:0006240,2.59e-10,39;UBERON:0004121,5.29e-10,95;UBERON:0000924,5.29e-10,95;UBERON:0006601,5.29e-10,95;UBERON:0003056,3.69e-09,49;UBERON:0000956,5.72e-09,21;UBERON:0001869,5.72e-09,21;UBERON:0000203,5.72e-09,21;UBERON:0010314,1.60e-08,92;UBERON:0002021,8.10e-08,10;UBERON:0000411,8.10e-08,10;UBERON:0001950,8.10e-08,10;UBERON:0002619,3.04e-07,17 | |||
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| ||
|short_description=p2@Zfand5 | |short_description=p2@Zfand5 | ||
}} | }} |
Latest revision as of 23:31, 1 October 2015
Short description: | p2@Zfand5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zfand5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -14bp_to_ENSMUST00000025659, NM_009551, uc008gyw.1_5end |
EntrezGene: | Zfand5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.96e-10 | 23 |
neuroblast (sensu Vertebrata) | 7.96e-10 | 23 |
neuron | 2.55e-07 | 33 |
neuronal stem cell | 2.55e-07 | 33 |
neuroblast | 2.55e-07 | 33 |
electrically signaling cell | 2.55e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.08e-14 | 34 |
regional part of nervous system | 1.22e-14 | 54 |
neural tube | 8.57e-14 | 52 |
neural rod | 8.57e-14 | 52 |
future spinal cord | 8.57e-14 | 52 |
neural keel | 8.57e-14 | 52 |
brain grey matter | 9.52e-13 | 29 |
regional part of telencephalon | 9.52e-13 | 29 |
telencephalon | 9.52e-13 | 29 |
nervous system | 2.90e-12 | 75 |
brain | 6.42e-12 | 47 |
future brain | 6.42e-12 | 47 |
central nervous system | 8.43e-12 | 73 |
regional part of brain | 2.47e-11 | 46 |
neurectoderm | 4.17e-11 | 64 |
neural plate | 4.17e-11 | 64 |
presumptive neural plate | 4.17e-11 | 64 |
anterior neural tube | 7.72e-11 | 40 |
ecto-epithelium | 2.18e-10 | 73 |
regional part of forebrain | 2.59e-10 | 39 |
forebrain | 2.59e-10 | 39 |
future forebrain | 2.59e-10 | 39 |
ectoderm-derived structure | 5.29e-10 | 95 |
ectoderm | 5.29e-10 | 95 |
presumptive ectoderm | 5.29e-10 | 95 |
pre-chordal neural plate | 3.69e-09 | 49 |
cerebral cortex | 5.72e-09 | 21 |
cerebral hemisphere | 5.72e-09 | 21 |
pallium | 5.72e-09 | 21 |
structure with developmental contribution from neural crest | 1.60e-08 | 92 |
occipital lobe | 8.10e-08 | 10 |
visual cortex | 8.10e-08 | 10 |
neocortex | 8.10e-08 | 10 |
regional part of cerebral cortex | 3.04e-07 | 17 |