FFCP PHASE1:Mm9::chrX:71550578..71550617,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14567 | |EntrezGene=14567 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000145580,ENSMUST00000149391_5end | |association_with_transcript=0bp_to_ENSMUST00000145580,ENSMUST00000149391_5end | ||
|cluster_id=chrX:71550578..71550617,+ | |||
|description=CAGE_peak_1_at_Gdi1_5end | |description=CAGE_peak_1_at_Gdi1_5end | ||
|id=chrX:71550578..71550617,+ | |id=chrX:71550578..71550617,+ | ||
|ontology_enrichment_celltype=CL:0000540!3.74e-14!33;CL:0000047!3.74e-14!33;CL:0000031!3.74e-14!33;CL:0000404!3.74e-14!33;CL:0000221!2.70e-13!44;CL:0000133!2.70e-13!44;CL:0002319!5.90e-13!43;CL:0000117!7.28e-13!23;CL:0000337!7.28e-13!23;CL:0000393!7.65e-12!39;CL:0000211!7.65e-12!39;CL:0000055!1.41e-10!50 | |ontology_enrichment_celltype=CL:0000540!3.74e-14!33;CL:0000047!3.74e-14!33;CL:0000031!3.74e-14!33;CL:0000404!3.74e-14!33;CL:0000221!2.70e-13!44;CL:0000133!2.70e-13!44;CL:0002319!5.90e-13!43;CL:0000117!7.28e-13!23;CL:0000337!7.28e-13!23;CL:0000393!7.65e-12!39;CL:0000211!7.65e-12!39;CL:0000055!1.41e-10!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.74e-14,33;CL:0000047,3.74e-14,33;CL:0000031,3.74e-14,33;CL:0000404,3.74e-14,33;CL:0000221,2.70e-13,44;CL:0000133,2.70e-13,44;CL:0002319,5.90e-13,43;CL:0000117,7.28e-13,23;CL:0000337,7.28e-13,23;CL:0000393,7.65e-12,39;CL:0000211,7.65e-12,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.41e-32!73;UBERON:0005743!4.41e-32!73;UBERON:0000073!8.16e-32!75;UBERON:0001016!8.16e-32!75;UBERON:0002346!2.05e-29!71;UBERON:0003075!2.05e-29!71;UBERON:0007284!2.05e-29!71;UBERON:0004121!3.18e-28!102;UBERON:0000924!3.18e-28!102;UBERON:0006601!3.18e-28!102;UBERON:0000033!3.72e-27!63;UBERON:0001049!2.51e-26!52;UBERON:0005068!2.51e-26!52;UBERON:0006241!2.51e-26!52;UBERON:0007135!2.51e-26!52;UBERON:0000955!2.02e-25!50;UBERON:0006238!2.02e-25!50;UBERON:0002616!8.15e-25!49;UBERON:0003056!7.30e-24!49;UBERON:0003080!7.39e-22!40;UBERON:0002780!4.20e-21!39;UBERON:0001890!4.20e-21!39;UBERON:0006240!4.20e-21!39;UBERON:0002020!1.33e-19!34;UBERON:0002791!5.00e-17!29;UBERON:0003528!5.00e-17!29;UBERON:0001893!5.00e-17!29;UBERON:0000153!4.90e-16!94;UBERON:0007811!4.93e-16!86;UBERON:0000956!3.19e-12!21;UBERON:0001869!3.19e-12!21;UBERON:0000203!3.19e-12!21;UBERON:0002619!2.26e-10!17;UBERON:0002021!1.34e-07!10;UBERON:0000411!1.34e-07!10;UBERON:0001950!1.34e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!4.41e-32!73;UBERON:0005743!4.41e-32!73;UBERON:0000073!8.16e-32!75;UBERON:0001016!8.16e-32!75;UBERON:0002346!2.05e-29!71;UBERON:0003075!2.05e-29!71;UBERON:0007284!2.05e-29!71;UBERON:0004121!3.18e-28!102;UBERON:0000924!3.18e-28!102;UBERON:0006601!3.18e-28!102;UBERON:0000033!3.72e-27!63;UBERON:0001049!2.51e-26!52;UBERON:0005068!2.51e-26!52;UBERON:0006241!2.51e-26!52;UBERON:0007135!2.51e-26!52;UBERON:0000955!2.02e-25!50;UBERON:0006238!2.02e-25!50;UBERON:0002616!8.15e-25!49;UBERON:0003056!7.30e-24!49;UBERON:0003080!7.39e-22!40;UBERON:0002780!4.20e-21!39;UBERON:0001890!4.20e-21!39;UBERON:0006240!4.20e-21!39;UBERON:0002020!1.33e-19!34;UBERON:0002791!5.00e-17!29;UBERON:0003528!5.00e-17!29;UBERON:0001893!5.00e-17!29;UBERON:0000153!4.90e-16!94;UBERON:0007811!4.93e-16!86;UBERON:0000956!3.19e-12!21;UBERON:0001869!3.19e-12!21;UBERON:0000203!3.19e-12!21;UBERON:0002619!2.26e-10!17;UBERON:0002021!1.34e-07!10;UBERON:0000411!1.34e-07!10;UBERON:0001950!1.34e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.41e-32,73;UBERON:0001016,8.16e-32,75;UBERON:0002346,2.31e-29,64;UBERON:0003075,2.31e-29,64;UBERON:0007284,2.31e-29,64;UBERON:0000073,1.18e-27,54;UBERON:0004121,1.70e-27,95;UBERON:0000924,1.70e-27,95;UBERON:0006601,1.70e-27,95;UBERON:0001049,2.51e-26,52;UBERON:0005068,2.51e-26,52;UBERON:0006241,2.51e-26,52;UBERON:0007135,2.51e-26,52;UBERON:0003056,7.30e-24,49;UBERON:0000955,1.81e-23,47;UBERON:0006238,1.81e-23,47;UBERON:0010371,3.24e-23,73;UBERON:0002616,7.14e-23,46;UBERON:0003080,7.39e-22,40;UBERON:0002780,4.20e-21,39;UBERON:0001890,4.20e-21,39;UBERON:0006240,4.20e-21,39;UBERON:0010314,2.39e-20,92;UBERON:0002020,1.33e-19,34;UBERON:0003528,5.00e-17,29;UBERON:0002791,5.00e-17,29;UBERON:0001893,5.00e-17,29;UBERON:0000956,3.19e-12,21;UBERON:0001869,3.19e-12,21;UBERON:0000203,3.19e-12,21;UBERON:0002619,2.26e-10,17;UBERON:0002021,1.34e-07,10;UBERON:0000411,1.34e-07,10;UBERON:0001950,1.34e-07,10 | |||
|phase1_expression=168.476587154243,103.296720661251,90.9998478779072,96.7885476181856,100.179145989269,65.1371575018132,72.6535312252085,129.898063382226,41.814250479045,57.3458089488884,39.7225686283172,39.0085857487195,111.794076645077,131.130603628496,46.6353666541928,64.7920855647443,66.4583784221739,113.566379528966,106.537914911659,125.619336932217,122.717467687994,53.7164045996789,59.2923521345383,81.7561280474308,74.5580163468303,75.2243872990676,67.6296333969747,71.9673917170869,84.5604216580864,55.4466285471848,62.0845429834853,40.6419631014164,24.6025915033828,47.5445043046316,39.5726719059246,29.7560015191701,44.5089196651965,315.154317944892,235.963274046188,288.461582929563,357.644744722857,379.090244151937,335.973164297558,103.990771647827,93.1653997907339,78.9251034295231,63.3736988921912,95.4950184946356,144.114135873814,140.572817030707,70.8331293424334,87.6890642626327,121.474606785801,68.1840413490664,71.2518854182024,76.4060525026763,70.7737596648729,79.9291743030036,378.129465346588,414.199936770002,285.857962981287,61.669704836582,46.2433293977792,37.3458382671781,39.554654502679,34.1030455174128,124.633645975656,121.797202786933,238.693487534116,298.498129651368,251.969303698956,356.778079520351,388.949500615791,286.016016166918,300.188015229116,286.796261422327,389.810218737836,431.838577404105,444.383700710312,469.910843182681,471.435827483217,406.312429034273,437.479759435164,387.743438311828,423.098348093987,329.689387145034,357.352918805748,375.781282783806,76.7106338465154,132.325801746981,93.9160943393436,60.229671388697,36.0384806865108,67.4628989547271,60.4292068226332,50.6270382419989,72.469320787984,82.48827612778,74.2987973164205,63.9544629863716,160.279811705862,56.4636500622998,61.153257529595,14.2213340630666,27.9273442904466,30.6565437224869,25.2762222507392,61.0883756496971,103.834091342516,166.997406447928,92.8146498198827,134.878206892279,92.7074298969355,120.578112442098,98.3041591654492,89.0976132527399,101.349936771093,100.062754988579,102.614824026185,58.3978328310147,72.6568595734695,71.2766622108776,85.7402101603362,344.310217285579,348.519320137589,68.9734049063197,31.1519323715393,12.5979573508616,23.63506223559,539.545883136171,507.368168525857,357.863594817438,477.321583247991,472.817880603781,492.249877561598,457.358120588009,63.4459236787471,80.7401239259504,80.6185599403422,93.0153003018215,107.739726773119,151.045682612792,150.351878387467,147.992131114672,137.365691786531,182.177710245056,143.551042025505,189.629570751698,65.9638058374497,114.220072421363,115.072035203223,101.706819846395,105.657954705727,93.3315806279406,93.2193077927984,85.1866661983151,26.6841011179029,13.8967869841946,17.9023004619223,81.6075543789877,83.4912773532702,71.4846384000229,83.5708916615792,75.5574649910031,75.1280839761532,73.7132604858793,68.4097173569029,68.89155199663,63.6846619165169,82.5762344317849,64.611841208047,75.4391935114715,74.2079389683751,67.3716222177066,503.223846913956,371.0740322397,109.699035950621,56.3279706993349,81.9026882055298,87.3209886195249,79.8978260196979,86.1188650141673,78.4994494772392,82.9383729850758,69.7557720470432,60.444516383712,79.1705907720849,72.61911229502,84.6144138096981,68.3102750577208,75.4321794062683,67.1106090867218,76.8154998859981,82.0304320537853,104.818194175965,88.5883276127117,80.4902821745647,66.7693005355833,75.3779522521147,79.7094799089852,79.1273588320529,84.0334686307462,84.1925460927503,48.7187708690995,43.8326559102443,45.4221467017405,51.1207505899027,60.776644257609,68.4943541292019,74.2256034623091,47.8298918986354,44.4789489364692,66.1333750025831,60.2868335222975,64.9038360078286,64.6601927544606,54.5368137106613,54.9985614354239,115.101237473795,78.0704616494397,83.7639978912013,76.2155435130595,88.4782236047653,113.234230030667,116.403340393261,88.2004088317251,102.305208524918,90.1361286870514,95.3539516571773,124.863845813392,118.807267523736,103.424076885781,60.3165135757089,43.5124547054968,52.6187772130369,55.4632860072512,509.266471441276,405.083588862654,41.9673460164289,58.3207841842102,117.684565842264,119.083817010475,152.519765594822,94.6316439892106,118.083297263669,100.209091899247,124.276885414193,150.511766824326,162.858564513968,388.477471553965,108.016404843492,97.0457539986541,54.4042444240944,110.529982391599,76.9921802371784,71.8630683018745,68.022800317069,69.9724845894382,92.1341905788011,91.6156740872904,67.1913562237375,67.9808074122935,72.3689678120984,67.9479029562004,68.5220955737492,56.7245487865028,244.43563693122,124.782338163698,173.858071004022,137.390039455251,213.69498153894,171.590802533192,182.155765806548,189.377198349281,78.3803504932793,80.4961869282517,103.207290289722,61.5025723471721,62.3252687046195,56.4528977327539,56.5824910574867,64.5073735998091,85.1124042959164,429.25957415433,77.5753798822251,56.9627755578494,71.299893037339,88.1564378781954,78.4624867118685,86.0205931256525,51.673442718132,50.3825228365169,56.8001892336182,118.379156633874,94.10995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| ||
|short_description=p1@Gdi1 | |short_description=p1@Gdi1 | ||
}} | }} |
Latest revision as of 00:18, 2 October 2015
Short description: | p1@Gdi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gdi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000145580, ENSMUST00000149391_5end |
EntrezGene: | Gdi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.74e-14 | 33 |
neuronal stem cell | 3.74e-14 | 33 |
neuroblast | 3.74e-14 | 33 |
electrically signaling cell | 3.74e-14 | 33 |
ectodermal cell | 2.70e-13 | 44 |
neurectodermal cell | 2.70e-13 | 44 |
neural cell | 5.90e-13 | 43 |
CNS neuron (sensu Vertebrata) | 7.28e-13 | 23 |
neuroblast (sensu Vertebrata) | 7.28e-13 | 23 |
electrically responsive cell | 7.65e-12 | 39 |
electrically active cell | 7.65e-12 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.41e-32 | 73 |
nervous system | 8.16e-32 | 75 |
neurectoderm | 2.31e-29 | 64 |
neural plate | 2.31e-29 | 64 |
presumptive neural plate | 2.31e-29 | 64 |
regional part of nervous system | 1.18e-27 | 54 |
ectoderm-derived structure | 1.70e-27 | 95 |
ectoderm | 1.70e-27 | 95 |
presumptive ectoderm | 1.70e-27 | 95 |
neural tube | 2.51e-26 | 52 |
neural rod | 2.51e-26 | 52 |
future spinal cord | 2.51e-26 | 52 |
neural keel | 2.51e-26 | 52 |
pre-chordal neural plate | 7.30e-24 | 49 |
brain | 1.81e-23 | 47 |
future brain | 1.81e-23 | 47 |
ecto-epithelium | 3.24e-23 | 73 |
regional part of brain | 7.14e-23 | 46 |
anterior neural tube | 7.39e-22 | 40 |
regional part of forebrain | 4.20e-21 | 39 |
forebrain | 4.20e-21 | 39 |
future forebrain | 4.20e-21 | 39 |
structure with developmental contribution from neural crest | 2.39e-20 | 92 |
gray matter | 1.33e-19 | 34 |
brain grey matter | 5.00e-17 | 29 |
regional part of telencephalon | 5.00e-17 | 29 |
telencephalon | 5.00e-17 | 29 |
cerebral cortex | 3.19e-12 | 21 |
cerebral hemisphere | 3.19e-12 | 21 |
pallium | 3.19e-12 | 21 |
regional part of cerebral cortex | 2.26e-10 | 17 |
occipital lobe | 1.34e-07 | 10 |
visual cortex | 1.34e-07 | 10 |
neocortex | 1.34e-07 | 10 |