FF:10196-103E7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005067 | ||
|accession_numbers=CAGE;DRX008644;DRR009516;DRZ000941;DRZ002326;DRZ012291;DRZ013676 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0001000,UBERON:0000479,UBERON:0000058,UBERON:0005156,UBERON:0000062,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003135,UBERON:0003133,UBERON:0005904,UBERON:0004175,UBERON:0010317,UBERON:0003101,UBERON:0000079,UBERON:0005352,UBERON:0006947,UBERON:0004054 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010196 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/ductus%2520deferens%252c%2520adult.CNhs12846.10196-103E7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/ductus%2520deferens%252c%2520adult.CNhs12846.10196-103E7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/ductus%2520deferens%252c%2520adult.CNhs12846.10196-103E7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/ductus%2520deferens%252c%2520adult.CNhs12846.10196-103E7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/ductus%2520deferens%252c%2520adult.CNhs12846.10196-103E7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10196-103E7 | |id=FF:10196-103E7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010196 | ||
|is_obsolete= | |||
|library_id=CNhs12846 | |||
|library_id_phase_based=2:CNhs12846 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10196 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10196 | |||
|name=ductus deferens, adult | |name=ductus deferens, adult | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12846,LSID973,release012,COMPLETED | |profile_hcage=CNhs12846,LSID973,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0.144444803709627,0.724175317191243,0.318414207296946,0,0,0,0,0,0,0,0,0,0.144444803709627,0,0,0,0.465423082366078,0,0.0722224018548135,0,0,0,0.241245659824243,0,0,0.485789502935643,0,0,0,0,0,0,0,0,0,0,0,0,0.437542714811508,0.252651317607602,0,0,0,0,0,0,0,0.048007380741979,0,0.0297343048086105,0,0.144444803709627,0,0.142989595104013,0,0.376191155689734,0,0,0.313996156699193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344768176944879,0.126325658803801,0,0,0.060394305554985,0,0.077843755596913,0.209092410919351,0.599385861395063,0,0.131771833813861,0.0859979768978015,0.0847300341540825,0,0.144444803709627,0,0,0.241168204854594,0.293580991554567,0,0,0,0,0,0,0.144444803709627,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0.415704412610198,0.486079565710829,0,0,0,0.144444803709627,0,0 | |||
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| |||
|rna_box=103 | |rna_box=103 | ||
|rna_catalog_number=R1234100-10 | |rna_catalog_number=R1234100-10 | ||
| Line 54: | Line 76: | ||
|rna_rin= | |rna_rin= | ||
|rna_sample_type= | |rna_sample_type= | ||
|rna_tube_id= | |rna_tube_id=1.03E+09 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age=24 | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.3013626752728e-225!GO:0005737;cytoplasm;2.48386501223951e-164!GO:0043226;organelle;2.08304561892252e-145!GO:0043229;intracellular organelle;3.64971384342478e-145!GO:0043231;intracellular membrane-bound organelle;2.68144090282836e-138!GO:0043227;membrane-bound organelle;3.59906892119005e-138!GO:0044444;cytoplasmic part;9.81036423554329e-115!GO:0044422;organelle part;8.18514080670957e-83!GO:0044446;intracellular organelle part;2.24624744302215e-81!GO:0005515;protein binding;5.76267189625442e-71!GO:0044238;primary metabolic process;2.2219602815178e-58!GO:0044237;cellular metabolic process;8.92787804286617e-58!GO:0032991;macromolecular complex;4.40627130000625e-57!GO:0043170;macromolecule metabolic process;8.8377072807983e-53!GO:0030529;ribonucleoprotein complex;2.05768410901063e-48!GO:0003723;RNA binding;7.71111929241164e-46!GO:0005739;mitochondrion;1.39159160225106e-45!GO:0043233;organelle lumen;1.39159160225106e-45!GO:0031974;membrane-enclosed lumen;1.39159160225106e-45!GO:0005634;nucleus;3.0053979177319e-43!GO:0031090;organelle membrane;1.09558044643116e-42!GO:0044428;nuclear part;8.79598546355375e-42!GO:0015031;protein transport;1.02812202523662e-41!GO:0033036;macromolecule localization;1.32521013357734e-41!GO:0008104;protein localization;9.33519847169018e-39!GO:0045184;establishment of protein localization;2.0254318777614e-38!GO:0016043;cellular component organization and biogenesis;1.198022119175e-35!GO:0019538;protein metabolic process;5.80154567275884e-34!GO:0044429;mitochondrial part;1.85331702090444e-32!GO:0031967;organelle envelope;6.67176030909349e-30!GO:0031975;envelope;1.02766259976763e-29!GO:0010467;gene expression;3.2610385134504e-29!GO:0043234;protein complex;3.31374568397421e-29!GO:0044260;cellular macromolecule metabolic process;4.76115866793746e-29!GO:0005840;ribosome;1.30995355324465e-28!GO:0043283;biopolymer metabolic process;1.46145623635123e-28!GO:0005829;cytosol;1.54808059237563e-28!GO:0044267;cellular protein metabolic process;3.04042995191131e-28!GO:0016071;mRNA metabolic process;3.74726572495635e-28!GO:0046907;intracellular transport;4.05693633453959e-28!GO:0006396;RNA processing;9.90351646577711e-28!GO:0006412;translation;3.33459227060469e-27!GO:0006886;intracellular protein transport;2.79827425277146e-26!GO:0008380;RNA splicing;1.33974135229108e-25!GO:0031981;nuclear lumen;1.54839324599698e-25!GO:0003735;structural constituent of ribosome;2.91723029219605e-24!GO:0006397;mRNA processing;3.98114794220865e-23!GO:0033279;ribosomal subunit;5.01986999586792e-23!GO:0065003;macromolecular complex assembly;1.60349516108252e-22!GO:0006119;oxidative phosphorylation;6.07337394974464e-22!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.48455863000574e-22!GO:0009058;biosynthetic process;8.67185531324568e-22!GO:0005740;mitochondrial envelope;1.6547127480139e-21!GO:0022607;cellular component assembly;2.19936236813387e-21!GO:0031966;mitochondrial membrane;1.13912941954968e-20!GO:0044249;cellular biosynthetic process;1.60432579929004e-20!GO:0009059;macromolecule biosynthetic process;6.30600492922262e-20!GO:0005783;endoplasmic reticulum;9.15691766944073e-20!GO:0019866;organelle inner membrane;1.15415280164022e-19!GO:0005743;mitochondrial inner membrane;1.15378727705433e-18!GO:0012505;endomembrane system;2.61663210211768e-18!GO:0005681;spliceosome;5.34334452967881e-18!GO:0005794;Golgi apparatus;9.95506267367179e-18!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.28836185676525e-17!GO:0008134;transcription factor binding;1.52949357067697e-17!GO:0005654;nucleoplasm;1.98866033684878e-17!GO:0051649;establishment of cellular localization;9.74433502680837e-17!GO:0051641;cellular localization;1.22925214001402e-16!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.15666603831357e-16!GO:0048770;pigment granule;4.62783840200442e-16!GO:0042470;melanosome;4.62783840200442e-16!GO:0016192;vesicle-mediated transport;5.9909220075151e-16!GO:0044455;mitochondrial membrane part;1.47707205306243e-15!GO:0048193;Golgi vesicle transport;1.64570318903706e-15!GO:0006457;protein folding;2.88943281012926e-15!GO:0044445;cytosolic part;3.22039299480464e-15!GO:0005746;mitochondrial respiratory chain;3.51967025580708e-15!GO:0000166;nucleotide binding;3.57539776423411e-15!GO:0006996;organelle organization and biogenesis;3.70808434557761e-15!GO:0016070;RNA metabolic process;5.63407658629597e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.63846234261103e-15!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.66190210298562e-15!GO:0044451;nucleoplasm part;9.27558251176513e-15!GO:0022618;protein-RNA complex assembly;1.51583935778354e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.78825512761104e-14!GO:0003954;NADH dehydrogenase activity;1.78825512761104e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.78825512761104e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;2.73033009916458e-14!GO:0031980;mitochondrial lumen;3.1584947290563e-14!GO:0005759;mitochondrial matrix;3.1584947290563e-14!GO:0006511;ubiquitin-dependent protein catabolic process;4.06813299953839e-14!GO:0044432;endoplasmic reticulum part;4.06813299953839e-14!GO:0043228;non-membrane-bound organelle;4.35334401106491e-14!GO:0043232;intracellular non-membrane-bound organelle;4.35334401106491e-14!GO:0019941;modification-dependent protein catabolic process;5.63518522720878e-14!GO:0043632;modification-dependent macromolecule catabolic process;5.63518522720878e-14!GO:0044257;cellular protein catabolic process;8.35677900433703e-14!GO:0016874;ligase activity;1.61650115601377e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;2.95564646103155e-13!GO:0003676;nucleic acid binding;3.64990857330672e-13!GO:0016462;pyrophosphatase activity;4.23856906450815e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.40738687992668e-13!GO:0044265;cellular macromolecule catabolic process;4.91069230717771e-13!GO:0006512;ubiquitin cycle;6.89400542201528e-13!GO:0015935;small ribosomal subunit;1.13431393424189e-12!GO:0006605;protein targeting;2.03232414340141e-12!GO:0030964;NADH dehydrogenase complex (quinone);2.3398596121504e-12!GO:0045271;respiratory chain complex I;2.3398596121504e-12!GO:0005747;mitochondrial respiratory chain complex I;2.3398596121504e-12!GO:0003712;transcription cofactor activity;2.92677282712215e-12!GO:0008135;translation factor activity, nucleic acid binding;3.68268699514388e-12!GO:0042775;organelle ATP synthesis coupled electron transport;4.62713314753119e-12!GO:0042773;ATP synthesis coupled electron transport;4.62713314753119e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.10818625989743e-12!GO:0017111;nucleoside-triphosphatase activity;1.28488194201743e-11!GO:0043285;biopolymer catabolic process;1.64901169716714e-11!GO:0051186;cofactor metabolic process;2.23659778468233e-11!GO:0015934;large ribosomal subunit;2.26685403130967e-11!GO:0016604;nuclear body;5.19894471566458e-11!GO:0051082;unfolded protein binding;8.27627073060648e-11!GO:0030163;protein catabolic process;9.44497725583812e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.44497725583812e-11!GO:0005789;endoplasmic reticulum membrane;1.20350910480149e-10!GO:0006446;regulation of translational initiation;1.20456422603411e-10!GO:0009055;electron carrier activity;1.39844550975778e-10!GO:0006732;coenzyme metabolic process;2.09105001193128e-10!GO:0044248;cellular catabolic process;2.63200321463424e-10!GO:0000502;proteasome complex (sensu Eukaryota);3.89189731630472e-10!GO:0043412;biopolymer modification;4.15580489855945e-10!GO:0006413;translational initiation;4.82780607281253e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.94863325843882e-10!GO:0016607;nuclear speck;4.98133116947702e-10!GO:0017076;purine nucleotide binding;5.48677535641326e-10!GO:0031982;vesicle;7.39248684537545e-10!GO:0050794;regulation of cellular process;7.70544376868017e-10!GO:0008565;protein transporter activity;9.69598891269069e-10!GO:0003743;translation initiation factor activity;9.8312640751842e-10!GO:0009057;macromolecule catabolic process;1.05735962680348e-09!GO:0005793;ER-Golgi intermediate compartment;1.11718912742628e-09!GO:0031410;cytoplasmic vesicle;1.22881986036906e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.59743813871476e-09!GO:0032553;ribonucleotide binding;1.74459617251606e-09!GO:0032555;purine ribonucleotide binding;1.74459617251606e-09!GO:0006461;protein complex assembly;1.99904559595759e-09!GO:0019829;cation-transporting ATPase activity;2.37611256940179e-09!GO:0008092;cytoskeletal protein binding;3.58341950723276e-09!GO:0006464;protein modification process;3.83566440065661e-09!GO:0015986;ATP synthesis coupled proton transport;4.07834385607035e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.07834385607035e-09!GO:0005635;nuclear envelope;4.88214393593138e-09!GO:0006913;nucleocytoplasmic transport;5.2467237336563e-09!GO:0031988;membrane-bound vesicle;5.51655308816774e-09!GO:0048523;negative regulation of cellular process;6.02545165034259e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.53013634469113e-09!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.55963107917465e-09!GO:0031965;nuclear membrane;8.05183028864096e-09!GO:0016023;cytoplasmic membrane-bound vesicle;8.61645852255364e-09!GO:0006259;DNA metabolic process;8.90733031869661e-09!GO:0016564;transcription repressor activity;1.17475142574479e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;1.17475142574479e-08!GO:0000375;RNA splicing, via transesterification reactions;1.17475142574479e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.17475142574479e-08!GO:0051169;nuclear transport;1.20263524499317e-08!GO:0043687;post-translational protein modification;1.36732318493844e-08!GO:0005730;nucleolus;3.18692841245207e-08!GO:0015078;hydrogen ion transmembrane transporter activity;3.68390885927013e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.71136695504615e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.71136695504615e-08!GO:0005761;mitochondrial ribosome;4.13314783159558e-08!GO:0000313;organellar ribosome;4.13314783159558e-08!GO:0006366;transcription from RNA polymerase II promoter;4.41152197591346e-08!GO:0016469;proton-transporting two-sector ATPase complex;4.48047184036337e-08!GO:0050789;regulation of biological process;4.61566761062293e-08!GO:0009199;ribonucleoside triphosphate metabolic process;5.30191979933102e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.46962975755174e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.46962975755174e-08!GO:0006754;ATP biosynthetic process;5.61423606051128e-08!GO:0006753;nucleoside phosphate metabolic process;5.61423606051128e-08!GO:0009141;nucleoside triphosphate metabolic process;6.9722909612337e-08!GO:0048475;coated membrane;6.97547571431271e-08!GO:0030117;membrane coat;6.97547571431271e-08!GO:0006888;ER to Golgi vesicle-mediated transport;7.60195455087172e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.73409402867279e-08!GO:0009144;purine nucleoside triphosphate metabolic process;7.73409402867279e-08!GO:0016887;ATPase activity;1.05172768216184e-07!GO:0046034;ATP metabolic process;1.33307033225457e-07!GO:0030554;adenyl nucleotide binding;1.42453250595979e-07!GO:0042623;ATPase activity, coupled;1.47500472635617e-07!GO:0009060;aerobic respiration;1.57920052641854e-07!GO:0008639;small protein conjugating enzyme activity;1.60487585979428e-07!GO:0030036;actin cytoskeleton organization and biogenesis;1.74109372365996e-07!GO:0031252;leading edge;1.74109372365996e-07!GO:0005768;endosome;1.81633712408995e-07!GO:0004842;ubiquitin-protein ligase activity;2.30710246176035e-07!GO:0017038;protein import;2.40404642502146e-07!GO:0030120;vesicle coat;2.42154001294351e-07!GO:0030662;coated vesicle membrane;2.42154001294351e-07!GO:0032559;adenyl ribonucleotide binding;3.4406876204212e-07!GO:0019787;small conjugating protein ligase activity;3.70054668921602e-07!GO:0048519;negative regulation of biological process;3.93929427046564e-07!GO:0009150;purine ribonucleotide metabolic process;4.11878592413728e-07!GO:0045333;cellular respiration;4.2006287980455e-07!GO:0012501;programmed cell death;4.20640560855134e-07!GO:0005524;ATP binding;4.40411345189769e-07!GO:0009259;ribonucleotide metabolic process;4.6952451577344e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.80455024912651e-07!GO:0006793;phosphorus metabolic process;5.25316981075813e-07!GO:0006796;phosphate metabolic process;5.25316981075813e-07!GO:0006915;apoptosis;6.58967638970127e-07!GO:0006163;purine nucleotide metabolic process;6.97856796429114e-07!GO:0007264;small GTPase mediated signal transduction;7.69907845336824e-07!GO:0051188;cofactor biosynthetic process;7.80287245345594e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.22216944389441e-07!GO:0009152;purine ribonucleotide biosynthetic process;8.99568597828233e-07!GO:0006091;generation of precursor metabolites and energy;1.33195459646523e-06!GO:0008219;cell death;1.56550798402484e-06!GO:0016265;death;1.56550798402484e-06!GO:0016568;chromatin modification;1.61068330952182e-06!GO:0006164;purine nucleotide biosynthetic process;1.64212012478277e-06!GO:0003714;transcription corepressor activity;1.81471635240013e-06!GO:0030029;actin filament-based process;1.86338911934412e-06!GO:0016310;phosphorylation;1.92021921689653e-06!GO:0005773;vacuole;2.01854879550101e-06!GO:0009260;ribonucleotide biosynthetic process;2.04534271111699e-06!GO:0006099;tricarboxylic acid cycle;2.11901587282641e-06!GO:0046356;acetyl-CoA catabolic process;2.11901587282641e-06!GO:0009108;coenzyme biosynthetic process;2.70185511394534e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;3.24338951746424e-06!GO:0016881;acid-amino acid ligase activity;3.27251662048657e-06!GO:0044431;Golgi apparatus part;4.01247975960337e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.16942277616562e-06!GO:0006084;acetyl-CoA metabolic process;5.61281545234843e-06!GO:0008654;phospholipid biosynthetic process;6.49466293052355e-06!GO:0009056;catabolic process;6.61734462672382e-06!GO:0003713;transcription coactivator activity;6.67978200806825e-06!GO:0006323;DNA packaging;6.73536488022679e-06!GO:0005798;Golgi-associated vesicle;6.94022543960687e-06!GO:0022890;inorganic cation transmembrane transporter activity;7.45469236006706e-06!GO:0044453;nuclear membrane part;7.79486903851366e-06!GO:0009109;coenzyme catabolic process;9.86124453860811e-06!GO:0031324;negative regulation of cellular metabolic process;1.05185114084967e-05!GO:0016563;transcription activator activity;1.27104135547671e-05!GO:0006606;protein import into nucleus;1.40768783676606e-05!GO:0051170;nuclear import;1.54735657862693e-05!GO:0005770;late endosome;1.63983932095613e-05!GO:0045259;proton-transporting ATP synthase complex;1.68862698218053e-05!GO:0051789;response to protein stimulus;1.71132437065789e-05!GO:0006986;response to unfolded protein;1.71132437065789e-05!GO:0019899;enzyme binding;1.78601121526983e-05!GO:0006613;cotranslational protein targeting to membrane;1.84126656750115e-05!GO:0009892;negative regulation of metabolic process;2.29014646548415e-05!GO:0000151;ubiquitin ligase complex;2.66574181383748e-05!GO:0030133;transport vesicle;2.79230190856575e-05!GO:0016481;negative regulation of transcription;2.91094570470422e-05!GO:0000323;lytic vacuole;3.16587442511766e-05!GO:0005764;lysosome;3.16587442511766e-05!GO:0045786;negative regulation of progression through cell cycle;3.2765972078412e-05!GO:0003779;actin binding;3.56776517730474e-05!GO:0019222;regulation of metabolic process;4.27240615839355e-05!GO:0006752;group transfer coenzyme metabolic process;4.31067079123998e-05!GO:0051246;regulation of protein metabolic process;4.7906402460499e-05!GO:0043566;structure-specific DNA binding;5.13707439714762e-05!GO:0015992;proton transport;5.25559590859349e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;5.67117168770466e-05!GO:0015399;primary active transmembrane transporter activity;5.67117168770466e-05!GO:0005643;nuclear pore;5.89659634031349e-05!GO:0006818;hydrogen transport;6.14500172702084e-05!GO:0016491;oxidoreductase activity;6.16512394592503e-05!GO:0051427;hormone receptor binding;6.2288084793421e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.61217709909102e-05!GO:0051187;cofactor catabolic process;7.42751925392933e-05!GO:0004386;helicase activity;7.43166558112834e-05!GO:0008026;ATP-dependent helicase activity;7.73700581556042e-05!GO:0008361;regulation of cell size;8.49328176801288e-05!GO:0006650;glycerophospholipid metabolic process;8.54819318795236e-05!GO:0050657;nucleic acid transport;8.57092438024035e-05!GO:0051236;establishment of RNA localization;8.57092438024035e-05!GO:0050658;RNA transport;8.57092438024035e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.26083868618765e-05!GO:0044440;endosomal part;9.94714643663468e-05!GO:0010008;endosome membrane;9.94714643663468e-05!GO:0016049;cell growth;0.000103584873598853!GO:0000245;spliceosome assembly;0.000114948500543666!GO:0006403;RNA localization;0.00011899354987197!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000119748399556666!GO:0004812;aminoacyl-tRNA ligase activity;0.000119748399556666!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000119748399556666!GO:0016044;membrane organization and biogenesis;0.000126041429011552!GO:0035257;nuclear hormone receptor binding;0.000127602677806662!GO:0032446;protein modification by small protein conjugation;0.000128282584674426!GO:0005083;small GTPase regulator activity;0.000132751308484063!GO:0015980;energy derivation by oxidation of organic compounds;0.000142895766225385!GO:0065007;biological regulation;0.000156405901561259!GO:0030027;lamellipodium;0.000169999846939558!GO:0007265;Ras protein signal transduction;0.000176161609077154!GO:0016567;protein ubiquitination;0.000176786005167508!GO:0043492;ATPase activity, coupled to movement of substances;0.000188984852918994!GO:0065002;intracellular protein transport across a membrane;0.000191707756827975!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000203382663140128!GO:0005788;endoplasmic reticulum lumen;0.000216521445715624!GO:0043038;amino acid activation;0.000220381732397533!GO:0006418;tRNA aminoacylation for protein translation;0.000220381732397533!GO:0043039;tRNA aminoacylation;0.000220381732397533!GO:0000139;Golgi membrane;0.000227492712426325!GO:0033116;ER-Golgi intermediate compartment membrane;0.000239483151561353!GO:0005791;rough endoplasmic reticulum;0.000248157399283831!GO:0030532;small nuclear ribonucleoprotein complex;0.000277221677912593!GO:0005839;proteasome core complex (sensu Eukaryota);0.000286147143577721!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000297508587650258!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000322915474456913!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000333857247819672!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000397880820402906!GO:0003924;GTPase activity;0.00040826377821548!GO:0001726;ruffle;0.000421787051910011!GO:0051276;chromosome organization and biogenesis;0.000427570840898466!GO:0042802;identical protein binding;0.000442845486279798!GO:0003697;single-stranded DNA binding;0.000456594776227789!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000469391265806367!GO:0030867;rough endoplasmic reticulum membrane;0.000505193612391032!GO:0019843;rRNA binding;0.00053932878753713!GO:0005741;mitochondrial outer membrane;0.000558593117941101!GO:0016859;cis-trans isomerase activity;0.00058197901531259!GO:0048471;perinuclear region of cytoplasm;0.000635427225466672!GO:0030658;transport vesicle membrane;0.000688447264703815!GO:0031968;organelle outer membrane;0.000725775659047201!GO:0006612;protein targeting to membrane;0.000728969158948145!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00074556253869964!GO:0051028;mRNA transport;0.000818498052199265!GO:0045892;negative regulation of transcription, DNA-dependent;0.000840003766773699!GO:0046930;pore complex;0.000849352877091468!GO:0035258;steroid hormone receptor binding;0.000852555423497341!GO:0030118;clathrin coat;0.000859669063583031!GO:0043623;cellular protein complex assembly;0.000877749012539807!GO:0019867;outer membrane;0.000888464552172345!GO:0016197;endosome transport;0.000891958773158049!GO:0005525;GTP binding;0.000891958773158049!GO:0003724;RNA helicase activity;0.000891958773158049!GO:0031072;heat shock protein binding;0.000891958773158049!GO:0004298;threonine endopeptidase activity;0.000922256605071148!GO:0004576;oligosaccharyl transferase activity;0.000962365737727827!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00098775171228176!GO:0006916;anti-apoptosis;0.00108603176106652!GO:0006399;tRNA metabolic process;0.00109449345338837!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00109492942203268!GO:0045045;secretory pathway;0.00111570401900059!GO:0042254;ribosome biogenesis and assembly;0.0011386859711282!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00114089346689423!GO:0001558;regulation of cell growth;0.00114089346689423!GO:0005099;Ras GTPase activator activity;0.00114089346689423!GO:0006974;response to DNA damage stimulus;0.00116740945852838!GO:0016853;isomerase activity;0.00119269231426513!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00119651816216004!GO:0043021;ribonucleoprotein binding;0.00119890949706551!GO:0051920;peroxiredoxin activity;0.00128803317274834!GO:0005905;coated pit;0.00132830819801131!GO:0005762;mitochondrial large ribosomal subunit;0.00151637028340192!GO:0000315;organellar large ribosomal subunit;0.00151637028340192!GO:0045893;positive regulation of transcription, DNA-dependent;0.00154819554572767!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00155056511924329!GO:0030119;AP-type membrane coat adaptor complex;0.00157007793975962!GO:0008250;oligosaccharyl transferase complex;0.00157499940442381!GO:0046474;glycerophospholipid biosynthetic process;0.0016740008862064!GO:0006892;post-Golgi vesicle-mediated transport;0.00170487703624647!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00175357000830237!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00175357000830237!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00175357000830237!GO:0006979;response to oxidative stress;0.00178176051250274!GO:0042981;regulation of apoptosis;0.00178176051250274!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0019030488739415!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00193725819621949!GO:0031323;regulation of cellular metabolic process;0.00218549332464346!GO:0043067;regulation of programmed cell death;0.00229464475174929!GO:0003690;double-stranded DNA binding;0.00239079942099!GO:0009719;response to endogenous stimulus;0.00242689780971923!GO:0006402;mRNA catabolic process;0.00243696966148424!GO:0030127;COPII vesicle coat;0.00243696966148424!GO:0012507;ER to Golgi transport vesicle membrane;0.00243696966148424!GO:0006891;intra-Golgi vesicle-mediated transport;0.00246402684301635!GO:0046467;membrane lipid biosynthetic process;0.00247016808854738!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00252360912369887!GO:0043069;negative regulation of programmed cell death;0.00252875425824216!GO:0006333;chromatin assembly or disassembly;0.00253125869011496!GO:0005769;early endosome;0.00256966092982009!GO:0030134;ER to Golgi transport vesicle;0.00260186645738053!GO:0006350;transcription;0.00265870082007286!GO:0030660;Golgi-associated vesicle membrane;0.00278328421015632!GO:0007010;cytoskeleton organization and biogenesis;0.00289893397081148!GO:0043066;negative regulation of apoptosis;0.00290265246443003!GO:0000074;regulation of progression through cell cycle;0.00301644569235149!GO:0030384;phosphoinositide metabolic process;0.00301748850399319!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00309843509768119!GO:0030659;cytoplasmic vesicle membrane;0.00310983450609281!GO:0051726;regulation of cell cycle;0.00310983450609281!GO:0048500;signal recognition particle;0.00314832495781475!GO:0030518;steroid hormone receptor signaling pathway;0.00326510286295632!GO:0005885;Arp2/3 protein complex;0.00337521960365815!GO:0030131;clathrin adaptor complex;0.00345882636875679!GO:0010468;regulation of gene expression;0.00348770873117328!GO:0030695;GTPase regulator activity;0.00355629233382421!GO:0051168;nuclear export;0.0036469629737738!GO:0051287;NAD binding;0.0036469629737738!GO:0032561;guanyl ribonucleotide binding;0.0036469629737738!GO:0019001;guanyl nucleotide binding;0.0036469629737738!GO:0006693;prostaglandin metabolic process;0.0036469629737738!GO:0006692;prostanoid metabolic process;0.0036469629737738!GO:0016740;transferase activity;0.00371535818894676!GO:0008286;insulin receptor signaling pathway;0.00379782347824512!GO:0050662;coenzyme binding;0.00424958402024747!GO:0045454;cell redox homeostasis;0.00427261083858245!GO:0009117;nucleotide metabolic process;0.00427261083858245!GO:0043087;regulation of GTPase activity;0.00432215446545587!GO:0003729;mRNA binding;0.00477824488106559!GO:0008047;enzyme activator activity;0.00479491030120255!GO:0030663;COPI coated vesicle membrane;0.00490016160450619!GO:0030126;COPI vesicle coat;0.00490016160450619!GO:0005667;transcription factor complex;0.00500597070910362!GO:0051087;chaperone binding;0.00527600320327342!GO:0006644;phospholipid metabolic process;0.00538211094600217!GO:0006643;membrane lipid metabolic process;0.00564040626461704!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00564911256830527!GO:0006281;DNA repair;0.00571263562632071!GO:0012506;vesicle membrane;0.00596449356803128!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00607738060722049!GO:0045941;positive regulation of transcription;0.00612555847620182!GO:0051128;regulation of cellular component organization and biogenesis;0.00647009970706994!GO:0005774;vacuolar membrane;0.00652200428509716!GO:0005048;signal sequence binding;0.0067592435463016!GO:0022406;membrane docking;0.00695894260929083!GO:0048278;vesicle docking;0.00695894260929083!GO:0006414;translational elongation;0.00726643575939221!GO:0006904;vesicle docking during exocytosis;0.00727683594447392!GO:0007243;protein kinase cascade;0.00749566067139942!GO:0000314;organellar small ribosomal subunit;0.00761831772316239!GO:0005763;mitochondrial small ribosomal subunit;0.00761831772316239!GO:0003702;RNA polymerase II transcription factor activity;0.00762262108939451!GO:0016787;hydrolase activity;0.00783978874246501!GO:0009966;regulation of signal transduction;0.00792954596000694!GO:0008154;actin polymerization and/or depolymerization;0.00799320518731016!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00813942965116518!GO:0044433;cytoplasmic vesicle part;0.00815808939500441!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00824776771383739!GO:0045047;protein targeting to ER;0.00824776771383739!GO:0007049;cell cycle;0.00829941658088604!GO:0018196;peptidyl-asparagine modification;0.00833605512851824!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00833605512851824!GO:0017166;vinculin binding;0.00856816788581261!GO:0031902;late endosome membrane;0.00866765061956624!GO:0008186;RNA-dependent ATPase activity;0.00942812720174248!GO:0007005;mitochondrion organization and biogenesis;0.0104152159869635!GO:0032318;regulation of Ras GTPase activity;0.0104923122439025!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0106653625045634!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0109922736390523!GO:0051252;regulation of RNA metabolic process;0.01115002278129!GO:0008287;protein serine/threonine phosphatase complex;0.0111679558755351!GO:0045947;negative regulation of translational initiation;0.0115887585920528!GO:0006897;endocytosis;0.0116755658653402!GO:0010324;membrane invagination;0.0116755658653402!GO:0005096;GTPase activator activity;0.0124303641792306!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0124603889550834!GO:0008312;7S RNA binding;0.012592146292928!GO:0043488;regulation of mRNA stability;0.0129516374157199!GO:0043487;regulation of RNA stability;0.0129516374157199!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0130051000198307!GO:0043034;costamere;0.0131122468458818!GO:0032774;RNA biosynthetic process;0.0133000026199911!GO:0030137;COPI-coated vesicle;0.0133370416242464!GO:0006351;transcription, DNA-dependent;0.0133370416242464!GO:0019904;protein domain specific binding;0.0133915040797728!GO:0006984;ER-nuclear signaling pathway;0.0137139689733259!GO:0003746;translation elongation factor activity;0.0138961478404494!GO:0008139;nuclear localization sequence binding;0.0138976141294052!GO:0043681;protein import into mitochondrion;0.0142758140069257!GO:0040008;regulation of growth;0.0144773009776281!GO:0032940;secretion by cell;0.0149626570744957!GO:0030176;integral to endoplasmic reticulum membrane;0.0149726427812118!GO:0051540;metal cluster binding;0.0152663547823611!GO:0051536;iron-sulfur cluster binding;0.0152663547823611!GO:0001725;stress fiber;0.0155834748277132!GO:0032432;actin filament bundle;0.0155834748277132!GO:0005912;adherens junction;0.0157420017251179!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0158117030256079!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0158117030256079!GO:0030132;clathrin coat of coated pit;0.0158295904245119!GO:0030522;intracellular receptor-mediated signaling pathway;0.0160568555627139!GO:0046489;phosphoinositide biosynthetic process;0.016567147583655!GO:0006118;electron transport;0.0167066739732504!GO:0051056;regulation of small GTPase mediated signal transduction;0.0167382220075226!GO:0004674;protein serine/threonine kinase activity;0.0168956132529451!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0170858973669527!GO:0005813;centrosome;0.0175294966715454!GO:0006401;RNA catabolic process;0.0175817954926927!GO:0001516;prostaglandin biosynthetic process;0.0176163348655804!GO:0046457;prostanoid biosynthetic process;0.0176163348655804!GO:0030521;androgen receptor signaling pathway;0.0177724299661208!GO:0004177;aminopeptidase activity;0.0180423691258222!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0182275540049009!GO:0006364;rRNA processing;0.0183551041416876!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0187984761397658!GO:0015002;heme-copper terminal oxidase activity;0.0187984761397658!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0187984761397658!GO:0004129;cytochrome-c oxidase activity;0.0187984761397658!GO:0030041;actin filament polymerization;0.0189788625095516!GO:0015631;tubulin binding;0.019127099748245!GO:0065004;protein-DNA complex assembly;0.0191417810185178!GO:0046914;transition metal ion binding;0.0192950989716095!GO:0044437;vacuolar part;0.01967539137114!GO:0003711;transcription elongation regulator activity;0.0197801005298401!GO:0006635;fatty acid beta-oxidation;0.0199357203552482!GO:0019371;cyclooxygenase pathway;0.0200337658704471!GO:0016301;kinase activity;0.0201264419451327!GO:0031625;ubiquitin protein ligase binding;0.0204657689671371!GO:0016584;nucleosome positioning;0.0206551363170898!GO:0050811;GABA receptor binding;0.021138371944773!GO:0015629;actin cytoskeleton;0.0225037039721917!GO:0043126;regulation of 1-phosphatidylinositol 4-kinase activity;0.0225272953498886!GO:0046813;virion attachment, binding of host cell surface receptor;0.0225272953498886!GO:0043128;positive regulation of 1-phosphatidylinositol 4-kinase activity;0.0225272953498886!GO:0044262;cellular carbohydrate metabolic process;0.0228888909010149!GO:0004004;ATP-dependent RNA helicase activity;0.022945400576201!GO:0000287;magnesium ion binding;0.022945400576201!GO:0035035;histone acetyltransferase binding;0.0230447782394223!GO:0030968;unfolded protein response;0.0232175141836555!GO:0005869;dynactin complex;0.0233838142720488!GO:0048487;beta-tubulin binding;0.0233838142720488!GO:0030140;trans-Golgi network transport vesicle;0.0233973804933183!GO:0032594;protein transport within lipid bilayer;0.0233973804933183!GO:0032907;transforming growth factor-beta3 production;0.0233973804933183!GO:0032596;protein transport into lipid raft;0.0233973804933183!GO:0032910;regulation of transforming growth factor-beta3 production;0.0233973804933183!GO:0032595;B cell receptor transport within lipid bilayer;0.0233973804933183!GO:0033606;chemokine receptor transport within lipid bilayer;0.0233973804933183!GO:0032600;chemokine receptor transport out of lipid raft;0.0233973804933183!GO:0032599;protein transport out of lipid raft;0.0233973804933183!GO:0032597;B cell receptor transport into lipid raft;0.0233973804933183!GO:0032913;negative regulation of transforming growth factor-beta3 production;0.0233973804933183!GO:0045792;negative regulation of cell size;0.0236656447551234!GO:0048522;positive regulation of cellular process;0.0240235439520008!GO:0008610;lipid biosynthetic process;0.0240235439520008!GO:0045449;regulation of transcription;0.0244667777738222!GO:0005815;microtubule organizing center;0.0256242234806765!GO:0016363;nuclear matrix;0.0256430087673284!GO:0006607;NLS-bearing substrate import into nucleus;0.0256664669727307!GO:0043414;biopolymer methylation;0.0258123996071518!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.025904533199971!GO:0030125;clathrin vesicle coat;0.0259095755513109!GO:0030665;clathrin coated vesicle membrane;0.0259095755513109!GO:0000059;protein import into nucleus, docking;0.0260505672367394!GO:0019752;carboxylic acid metabolic process;0.0261461328992211!GO:0007266;Rho protein signal transduction;0.0263439907835415!GO:0046578;regulation of Ras protein signal transduction;0.0271877569503283!GO:0030308;negative regulation of cell growth;0.0274811591400734!GO:0016072;rRNA metabolic process;0.0285283889609198!GO:0001666;response to hypoxia;0.0286891171606655!GO:0030241;muscle thick filament assembly;0.0287988684030934!GO:0031034;myosin filament assembly;0.0287988684030934!GO:0031033;myosin filament assembly or disassembly;0.0287988684030934!GO:0048739;cardiac muscle fiber development;0.0287988684030934!GO:0008270;zinc ion binding;0.0302599232804756!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0302676657472036!GO:0007030;Golgi organization and biogenesis;0.0303829923025292!GO:0006082;organic acid metabolic process;0.0307248596524358!GO:0006338;chromatin remodeling;0.0312017904414673!GO:0008147;structural constituent of bone;0.0325847125349232!GO:0045098;type III intermediate filament;0.0331059914770322!GO:0006383;transcription from RNA polymerase III promoter;0.034518507500986!GO:0015630;microtubule cytoskeleton;0.0358472340947255!GO:0046983;protein dimerization activity;0.0360869607210531!GO:0006376;mRNA splice site selection;0.0369153025439134!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0369153025439134!GO:0006658;phosphatidylserine metabolic process;0.0370422013612553!GO:0005765;lysosomal membrane;0.0379335666687046!GO:0006518;peptide metabolic process;0.0401744630014154!GO:0006595;polyamine metabolic process;0.0405068908506835!GO:0000096;sulfur amino acid metabolic process;0.0406669547226284!GO:0040029;regulation of gene expression, epigenetic;0.0407602529873326!GO:0006611;protein export from nucleus;0.0407856500467643!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0412869179064461!GO:0003756;protein disulfide isomerase activity;0.041441406225186!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.041441406225186!GO:0030433;ER-associated protein catabolic process;0.0415745213183396!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0415745213183396!GO:0031529;ruffle organization and biogenesis;0.042421179896944!GO:0042581;specific granule;0.0436173893643985!GO:0050681;androgen receptor binding;0.0438959826493269!GO:0000785;chromatin;0.0438959826493269!GO:0009165;nucleotide biosynthetic process;0.0438959826493269!GO:0030911;TPR domain binding;0.0439425725330103!GO:0005784;translocon complex;0.0439425725330103!GO:0004300;enoyl-CoA hydratase activity;0.0439425725330103!GO:0007004;telomere maintenance via telomerase;0.0440372815762301!GO:0009083;branched chain family amino acid catabolic process;0.0441147591982944!GO:0006354;RNA elongation;0.0442281331126869!GO:0016272;prefoldin complex;0.0446028831865364!GO:0005862;muscle thin filament tropomyosin;0.0454974692690131!GO:0005100;Rho GTPase activator activity;0.0464856049258259!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0467887179586745!GO:0007040;lysosome organization and biogenesis;0.0468196271258011!GO:0006260;DNA replication;0.0469821831584921!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0470320207931192!GO:0000118;histone deacetylase complex;0.0478013458221041!GO:0006355;regulation of transcription, DNA-dependent;0.0480389160037112!GO:0051539;4 iron, 4 sulfur cluster binding;0.0485433353536075!GO:0008601;protein phosphatase type 2A regulator activity;0.0492834090305103!GO:0030331;estrogen receptor binding;0.0498157326283976 | |||
|sample_id=10196 | |sample_id=10196 | ||
|sample_note= | |sample_note= | ||
|sample_sex= | |sample_sex=M | ||
|sample_species=Human (Homo sapiens) | |sample_species=Human (Homo sapiens) | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue= | |sample_tissue= | ||
|top_motifs=AR:3.06851309951;NR3C1:2.93681801041;IKZF2:2.45128033777;GATA4:2.02289351686;XBP1:1.98887785649;MYBL2:1.94811918312;SRF:1.90548763669;FOX{D1,D2}:1.71853719222;SP1:1.54538048375;SNAI1..3:1.50689839401;SOX5:1.49165284555;PRDM1:1.46422557972;ATF6:1.45520601009;TFAP2{A,C}:1.41538793559;XCPE1{core}:1.37579916483;RREB1:1.30297713795;FOXP1:1.29637671462;HOX{A6,A7,B6,B7}:1.26724927828;FOXO1,3,4:1.23131236229;GTF2I:1.21048115917;MZF1:1.21043654823;MAZ:1.18500124603;ZEB1:1.16270868301;PAX6:1.16162893603;GFI1B:1.13634693914;MYFfamily:1.08569320515;HNF1A:1.08535864309;NFATC1..3:1.0744424484;TFCP2:1.03391526169;TFAP2B:1.02782827001;POU6F1:1.01778614511;HIC1:1.01280383691;ESR1:1.01100797904;PAX5:0.976167246605;TLX1..3_NFIC{dimer}:0.975701547096;HBP1_HMGB_SSRP1_UBTF:0.972384065663;NKX3-2:0.96973046289;ARID5B:0.896888076484;PATZ1:0.869450858517;RFX2..5_RFXANK_RFXAP:0.855837150286;GATA6:0.849809541066;ZIC1..3:0.828741741857;FOXN1:0.824328236917;MED-1{core}:0.819514806051;BPTF:0.793609374285;TEAD1:0.729050517269;MYOD1:0.722824627731;HMX1:0.720511607076;FOXQ1:0.708815869598;TLX2:0.703960689897;EVI1:0.651598880182;FOX{I1,J2}:0.621295374211;GTF2A1,2:0.606354899046;HAND1,2:0.601852529224;TFAP4:0.590964347554;MTF1:0.587684065343;SREBF1,2:0.586412534594;ESRRA:0.570424647507;SMAD1..7,9:0.569620102599;FOXP3:0.550962065526;FOXL1:0.546499626928;ZBTB6:0.52077207628;SPZ1:0.502391395583;PITX1..3:0.493190327919;EGR1..3:0.487488806976;HOX{A4,D4}:0.487252974614;CDC5L:0.486063332954;EBF1:0.469774507741;RFX1:0.466152318342;NR1H4:0.439563054078;LMO2:0.432142074884;CDX1,2,4:0.406590065597;FOXM1:0.385643383099;HSF1,2:0.369472268693;TBP:0.369274136692;NR6A1:0.36516208293;RBPJ:0.331945846745;MTE{core}:0.329849409519;POU2F1..3:0.314505902926;TOPORS:0.282508022927;KLF4:0.281192440425;ZNF143:0.277739360132;TP53:0.266277198797;GZF1:0.261371339116;ZFP161:0.247897937204;ZNF384:0.240459811444;UFEwm:0.239457059972;POU3F1..4:0.238735476521;TEF:0.231686785282;HES1:0.215772072115;DBP:0.171307479754;BREu{core}:0.148622104746;TGIF1:0.140922211183;NKX2-3_NKX2-5:0.120287712741;CREB1:0.117429990516;MEF2{A,B,C,D}:0.105912813336;NFIX:0.0963239319809;STAT1,3:0.0931603767639;HMGA1,2:0.0681718387913;NHLH1,2:0.0474980242349;PBX1:0.0107972226131;FOXD3:0.0098877426704;NRF1:-0.0239841764676;PAX4:-0.0345253943245;ZNF423:-0.083019805027;GCM1,2:-0.0882811489579;IRF7:-0.0929633822221;EP300:-0.0974766067232;ADNP_IRX_SIX_ZHX:-0.128320862878;ATF2:-0.133642330602;SOX17:-0.179579268536;ONECUT1,2:-0.18359344206;LEF1_TCF7_TCF7L1,2:-0.184720562801;GFI1:-0.188794838164;NFY{A,B,C}:-0.208261868136;AIRE:-0.219620124138;NR5A1,2:-0.222744090642;TBX4,5:-0.245324003722;ZBTB16:-0.249393383147;SPI1:-0.25743265161;REST:-0.26791370045;ZNF238:-0.280007903169;IKZF1:-0.286445816332;ETS1,2:-0.298742154946;AHR_ARNT_ARNT2:-0.302699500607;ATF4:-0.312098288329;SOX{8,9,10}:-0.327772740123;HNF4A_NR2F1,2:-0.339824261279;POU5F1:-0.344773890994;NKX6-1,2:-0.353083258017;NANOG:-0.374035989024;ALX4:-0.378756649046;IRF1,2:-0.386700692963;SPIB:-0.401327351688;ELF1,2,4:-0.408063896883;T:-0.417793274041;PAX1,9:-0.437630318903;NFE2L1:-0.455486552692;ALX1:-0.463727009136;HLF:-0.467310993491;ATF5_CREB3:-0.47803004969;SOX2:-0.479117051513;STAT2,4,6:-0.493160291624;ELK1,4_GABP{A,B1}:-0.503318536681;PDX1:-0.50540507453;HOX{A5,B5}:-0.515128893942;ZNF148:-0.520904124801;NFIL3:-0.535542856722;CUX2:-0.544006126985;HOXA9_MEIS1:-0.552169367739;PRRX1,2:-0.562284737906;RORA:-0.566574843437;VSX1,2:-0.587263280736;DMAP1_NCOR{1,2}_SMARC:-0.597329505617;JUN:-0.626190838448;FOSL2:-0.635704113403;RXR{A,B,G}:-0.651288694698;YY1:-0.654968304784;RXRA_VDR{dimer}:-0.671521383088;CEBPA,B_DDIT3:-0.674347344429;NFKB1_REL_RELA:-0.695110881367;NKX2-1,4:-0.718850625215;FOX{F1,F2,J1}:-0.72503451841;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.731034924478;HIF1A:-0.757729248403;NFE2:-0.759056043679;PAX3,7:-0.772745084229;BACH2:-0.779419846838;POU1F1:-0.781426564894;LHX3,4:-0.82218983372;RUNX1..3:-0.838742756009;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.876670843962;PAX2:-0.931542365254;TFDP1:-0.932733679016;E2F1..5:-0.954208164126;STAT5{A,B}:-0.954713583515;FOS_FOS{B,L1}_JUN{B,D}:-0.965777074383;NFE2L2:-0.981057334844;GLI1..3:-1.00230247745;NKX2-2,8:-1.01334662763;NANOG{mouse}:-1.0187843962;FOXA2:-1.07111373667;EN1,2:-1.1295875426;TAL1_TCF{3,4,12}:-1.205367242;MAFB:-1.20585035425;bHLH_family:-1.25075197258;PAX8:-1.47534420087;NKX3-1:-1.61756123962;OCT4_SOX2{dimer}:-1.62622289865;MYB:-1.76499907557;CRX:-1.89975137312;PPARG:-1.92610705862 | |top_motifs=AR:3.06851309951;NR3C1:2.93681801041;IKZF2:2.45128033777;GATA4:2.02289351686;XBP1:1.98887785649;MYBL2:1.94811918312;SRF:1.90548763669;FOX{D1,D2}:1.71853719222;SP1:1.54538048375;SNAI1..3:1.50689839401;SOX5:1.49165284555;PRDM1:1.46422557972;ATF6:1.45520601009;TFAP2{A,C}:1.41538793559;XCPE1{core}:1.37579916483;RREB1:1.30297713795;FOXP1:1.29637671462;HOX{A6,A7,B6,B7}:1.26724927828;FOXO1,3,4:1.23131236229;GTF2I:1.21048115917;MZF1:1.21043654823;MAZ:1.18500124603;ZEB1:1.16270868301;PAX6:1.16162893603;GFI1B:1.13634693914;MYFfamily:1.08569320515;HNF1A:1.08535864309;NFATC1..3:1.0744424484;TFCP2:1.03391526169;TFAP2B:1.02782827001;POU6F1:1.01778614511;HIC1:1.01280383691;ESR1:1.01100797904;PAX5:0.976167246605;TLX1..3_NFIC{dimer}:0.975701547096;HBP1_HMGB_SSRP1_UBTF:0.972384065663;NKX3-2:0.96973046289;ARID5B:0.896888076484;PATZ1:0.869450858517;RFX2..5_RFXANK_RFXAP:0.855837150286;GATA6:0.849809541066;ZIC1..3:0.828741741857;FOXN1:0.824328236917;MED-1{core}:0.819514806051;BPTF:0.793609374285;TEAD1:0.729050517269;MYOD1:0.722824627731;HMX1:0.720511607076;FOXQ1:0.708815869598;TLX2:0.703960689897;EVI1:0.651598880182;FOX{I1,J2}:0.621295374211;GTF2A1,2:0.606354899046;HAND1,2:0.601852529224;TFAP4:0.590964347554;MTF1:0.587684065343;SREBF1,2:0.586412534594;ESRRA:0.570424647507;SMAD1..7,9:0.569620102599;FOXP3:0.550962065526;FOXL1:0.546499626928;ZBTB6:0.52077207628;SPZ1:0.502391395583;PITX1..3:0.493190327919;EGR1..3:0.487488806976;HOX{A4,D4}:0.487252974614;CDC5L:0.486063332954;EBF1:0.469774507741;RFX1:0.466152318342;NR1H4:0.439563054078;LMO2:0.432142074884;CDX1,2,4:0.406590065597;FOXM1:0.385643383099;HSF1,2:0.369472268693;TBP:0.369274136692;NR6A1:0.36516208293;RBPJ:0.331945846745;MTE{core}:0.329849409519;POU2F1..3:0.314505902926;TOPORS:0.282508022927;KLF4:0.281192440425;ZNF143:0.277739360132;TP53:0.266277198797;GZF1:0.261371339116;ZFP161:0.247897937204;ZNF384:0.240459811444;UFEwm:0.239457059972;POU3F1..4:0.238735476521;TEF:0.231686785282;HES1:0.215772072115;DBP:0.171307479754;BREu{core}:0.148622104746;TGIF1:0.140922211183;NKX2-3_NKX2-5:0.120287712741;CREB1:0.117429990516;MEF2{A,B,C,D}:0.105912813336;NFIX:0.0963239319809;STAT1,3:0.0931603767639;HMGA1,2:0.0681718387913;NHLH1,2:0.0474980242349;PBX1:0.0107972226131;FOXD3:0.0098877426704;NRF1:-0.0239841764676;PAX4:-0.0345253943245;ZNF423:-0.083019805027;GCM1,2:-0.0882811489579;IRF7:-0.0929633822221;EP300:-0.0974766067232;ADNP_IRX_SIX_ZHX:-0.128320862878;ATF2:-0.133642330602;SOX17:-0.179579268536;ONECUT1,2:-0.18359344206;LEF1_TCF7_TCF7L1,2:-0.184720562801;GFI1:-0.188794838164;NFY{A,B,C}:-0.208261868136;AIRE:-0.219620124138;NR5A1,2:-0.222744090642;TBX4,5:-0.245324003722;ZBTB16:-0.249393383147;SPI1:-0.25743265161;REST:-0.26791370045;ZNF238:-0.280007903169;IKZF1:-0.286445816332;ETS1,2:-0.298742154946;AHR_ARNT_ARNT2:-0.302699500607;ATF4:-0.312098288329;SOX{8,9,10}:-0.327772740123;HNF4A_NR2F1,2:-0.339824261279;POU5F1:-0.344773890994;NKX6-1,2:-0.353083258017;NANOG:-0.374035989024;ALX4:-0.378756649046;IRF1,2:-0.386700692963;SPIB:-0.401327351688;ELF1,2,4:-0.408063896883;T:-0.417793274041;PAX1,9:-0.437630318903;NFE2L1:-0.455486552692;ALX1:-0.463727009136;HLF:-0.467310993491;ATF5_CREB3:-0.47803004969;SOX2:-0.479117051513;STAT2,4,6:-0.493160291624;ELK1,4_GABP{A,B1}:-0.503318536681;PDX1:-0.50540507453;HOX{A5,B5}:-0.515128893942;ZNF148:-0.520904124801;NFIL3:-0.535542856722;CUX2:-0.544006126985;HOXA9_MEIS1:-0.552169367739;PRRX1,2:-0.562284737906;RORA:-0.566574843437;VSX1,2:-0.587263280736;DMAP1_NCOR{1,2}_SMARC:-0.597329505617;JUN:-0.626190838448;FOSL2:-0.635704113403;RXR{A,B,G}:-0.651288694698;YY1:-0.654968304784;RXRA_VDR{dimer}:-0.671521383088;CEBPA,B_DDIT3:-0.674347344429;NFKB1_REL_RELA:-0.695110881367;NKX2-1,4:-0.718850625215;FOX{F1,F2,J1}:-0.72503451841;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.731034924478;HIF1A:-0.757729248403;NFE2:-0.759056043679;PAX3,7:-0.772745084229;BACH2:-0.779419846838;POU1F1:-0.781426564894;LHX3,4:-0.82218983372;RUNX1..3:-0.838742756009;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.876670843962;PAX2:-0.931542365254;TFDP1:-0.932733679016;E2F1..5:-0.954208164126;STAT5{A,B}:-0.954713583515;FOS_FOS{B,L1}_JUN{B,D}:-0.965777074383;NFE2L2:-0.981057334844;GLI1..3:-1.00230247745;NKX2-2,8:-1.01334662763;NANOG{mouse}:-1.0187843962;FOXA2:-1.07111373667;EN1,2:-1.1295875426;TAL1_TCF{3,4,12}:-1.205367242;MAFB:-1.20585035425;bHLH_family:-1.25075197258;PAX8:-1.47534420087;NKX3-1:-1.61756123962;OCT4_SOX2{dimer}:-1.62622289865;MYB:-1.76499907557;CRX:-1.89975137312;PPARG:-1.92610705862 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10196-103E7;search_select_hide=table117:FF:10196-103E7 | |||
}} | }} | ||
Latest revision as of 12:26, 3 June 2020
| Name: | ductus deferens, adult |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12846 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12846
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12846
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0999 |
| 10 | 10 | 0.125 |
| 100 | 100 | 0.461 |
| 101 | 101 | 0.76 |
| 102 | 102 | 0.955 |
| 103 | 103 | 0.289 |
| 104 | 104 | 0.467 |
| 105 | 105 | 0.0271 |
| 106 | 106 | 0.248 |
| 107 | 107 | 0.538 |
| 108 | 108 | 0.816 |
| 109 | 109 | 0.0114 |
| 11 | 11 | 0.0282 |
| 110 | 110 | 0.0346 |
| 111 | 111 | 0.181 |
| 112 | 112 | 0.548 |
| 113 | 113 | 0.577 |
| 114 | 114 | 0.342 |
| 115 | 115 | 0.992 |
| 116 | 116 | 0.804 |
| 117 | 117 | 0.0418 |
| 118 | 118 | 0.281 |
| 119 | 119 | 0.669 |
| 12 | 12 | 0.729 |
| 120 | 120 | 0.0211 |
| 121 | 121 | 0.806 |
| 122 | 122 | 0.903 |
| 123 | 123 | 0.847 |
| 124 | 124 | 0.204 |
| 125 | 125 | 0.254 |
| 126 | 126 | 0.537 |
| 127 | 127 | 0.413 |
| 128 | 128 | 0.592 |
| 129 | 129 | 0.641 |
| 13 | 13 | 0.259 |
| 130 | 130 | 0.211 |
| 131 | 131 | 0.934 |
| 132 | 132 | 0.0299 |
| 133 | 133 | 0.248 |
| 134 | 134 | 0.996 |
| 135 | 135 | 0.845 |
| 136 | 136 | 0.684 |
| 137 | 137 | 0.0708 |
| 138 | 138 | 0.538 |
| 139 | 139 | 0.505 |
| 14 | 14 | 0.869 |
| 140 | 140 | 0.713 |
| 141 | 141 | 0.368 |
| 142 | 142 | 0.524 |
| 143 | 143 | 0.0352 |
| 144 | 144 | 0.914 |
| 145 | 145 | 0.972 |
| 146 | 146 | 0.455 |
| 147 | 147 | 0.365 |
| 148 | 148 | 0.39 |
| 149 | 149 | 0.65 |
| 15 | 15 | 0.0202 |
| 150 | 150 | 0.5 |
| 151 | 151 | 0.67 |
| 152 | 152 | 0.591 |
| 153 | 153 | 0.873 |
| 154 | 154 | 0.835 |
| 155 | 155 | 0.796 |
| 156 | 156 | 0.579 |
| 157 | 157 | 0.174 |
| 158 | 158 | 0.621 |
| 159 | 159 | 0.0191 |
| 16 | 16 | 0.381 |
| 160 | 160 | 0.248 |
| 161 | 161 | 0.628 |
| 162 | 162 | 0.988 |
| 163 | 163 | 0.887 |
| 164 | 164 | 0.101 |
| 165 | 165 | 0.8 |
| 166 | 166 | 0.923 |
| 167 | 167 | 0.714 |
| 168 | 168 | 0.153 |
| 169 | 169 | 0.579 |
| 17 | 17 | 0.162 |
| 18 | 18 | 0.0086 |
| 19 | 19 | 0.612 |
| 2 | 2 | 0.225 |
| 20 | 20 | 0.304 |
| 21 | 21 | 0.868 |
| 22 | 22 | 0.727 |
| 23 | 23 | 0.759 |
| 24 | 24 | 0.306 |
| 25 | 25 | 0.157 |
| 26 | 26 | 0.0628 |
| 27 | 27 | 0.543 |
| 28 | 28 | 0.646 |
| 29 | 29 | 0.0224 |
| 3 | 3 | 0.0901 |
| 30 | 30 | 0.248 |
| 31 | 31 | 0.864 |
| 32 | 32 | 0.642 |
| 33 | 33 | 0.114 |
| 34 | 34 | 0.812 |
| 35 | 35 | 0.254 |
| 36 | 36 | 0.00974 |
| 37 | 37 | 0.168 |
| 38 | 38 | 0.723 |
| 39 | 39 | 0.696 |
| 4 | 4 | 0.139 |
| 40 | 40 | 0.0197 |
| 41 | 41 | 8.46895e-4 |
| 42 | 42 | 0.0923 |
| 43 | 43 | 0.12 |
| 44 | 44 | 0.666 |
| 45 | 45 | 0.916 |
| 46 | 46 | 0.033 |
| 47 | 47 | 0.022 |
| 48 | 48 | 0.186 |
| 49 | 49 | 0.162 |
| 5 | 5 | 0.201 |
| 50 | 50 | 0.597 |
| 51 | 51 | 0.151 |
| 52 | 52 | 0.204 |
| 53 | 53 | 0.666 |
| 54 | 54 | 0.358 |
| 55 | 55 | 0.761 |
| 56 | 56 | 0.716 |
| 57 | 57 | 0.37 |
| 58 | 58 | 0.479 |
| 59 | 59 | 0.134 |
| 6 | 6 | 0.323 |
| 60 | 60 | 0.568 |
| 61 | 61 | 0.377 |
| 62 | 62 | 0.102 |
| 63 | 63 | 0.475 |
| 64 | 64 | 0.219 |
| 65 | 65 | 0.48 |
| 66 | 66 | 0.0967 |
| 67 | 67 | 0.392 |
| 68 | 68 | 1 |
| 69 | 69 | 0.658 |
| 7 | 7 | 0.116 |
| 70 | 70 | 0.39 |
| 71 | 71 | 0.0646 |
| 72 | 72 | 0.35 |
| 73 | 73 | 0.0697 |
| 74 | 74 | 0.346 |
| 75 | 75 | 0.0187 |
| 76 | 76 | 0.0618 |
| 77 | 77 | 0.38 |
| 78 | 78 | 0.44 |
| 79 | 79 | 0.301 |
| 8 | 8 | 0.2 |
| 80 | 80 | 0.0293 |
| 81 | 81 | 0.682 |
| 82 | 82 | 0.723 |
| 83 | 83 | 0.805 |
| 84 | 84 | 0.949 |
| 85 | 85 | 0.309 |
| 86 | 86 | 0.382 |
| 87 | 87 | 0.0169 |
| 88 | 88 | 0.869 |
| 89 | 89 | 0.117 |
| 9 | 9 | 0.555 |
| 90 | 90 | 0.239 |
| 91 | 91 | 0.553 |
| 92 | 92 | 0.894 |
| 93 | 93 | 0.0579 |
| 94 | 94 | 0.0967 |
| 95 | 95 | 1.3681e-4 |
| 96 | 96 | 0.531 |
| 97 | 97 | 0.407 |
| 98 | 98 | 0.489 |
| 99 | 99 | 0.7 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12846
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0001000 (vas deferens)
0000479 (tissue)
0000058 (duct)
0005156 (reproductive structure)
0000062 (organ)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003135 (male reproductive organ)
0003133 (reproductive organ)
0005904 (duct of male reproductive system)
0004175 (internal genitalia)
0010317 (germ layer / neural crest derived structure)
0003101 (male organism)
0000079 (male reproductive system)
0005352 (spermatic cord)
0006947 (male genital duct)
0004054 (internal male genitalia)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010196 (human ductus deferens - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)
