FF:10589-108D4: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00005178 | ||
| | |DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00005178 | ||
| | |accession_numbers=CAGE;DRX007829;DRR008701;DRZ000126;DRZ001511;DRZ011476;DRZ012861 | ||
| | |accession_numbers_RNASeq=RNA-Seq;DRX057130;DRR062889;DRZ007965 | ||
| | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000002,UBERON:0000995,UBERON:0000483,UBERON:0003134,UBERON:0000479,UBERON:0001560,UBERON:0005156,UBERON:0000064,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0006955,UBERON:0004801,UBERON:0003100,UBERON:0000474 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000255,CL:0002535 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:0050687,DOID:193,DOID:305,DOID:120,DOID:4362 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120,FF:0101967 | |||
|comment= | |||
|created_by= | |||
|creation_date= | |||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |||
|expression_enrichment_score=chr2:182545234..182545252,-!p1@NEUROD1!2.75!558.28!NEUROD1;;chr20:20348740..20348757,+!p1@INSM1!2.72!518.73!INSM1;;chrX:25034067..25034088,-!p1@ARX!2.38!236.56!ARX;;chr8:41508327..41508355,-!p1@NKX6-3!2.34!217.92!NKX6-3;;chr7:73038839..73038862,-!p1@MLXIPL!2.29!193.99!MLXIPL;;chr4:57547454..57547469,-!p1@HOPX!2.22!165.02!HOPX;;chr6:117198400..117198441,+!p1@RFX6!2.12!129.75!RFX6;;chr13:28494130..28494168,+!p1@PDX1!2.02!104.30!PDX1;;chr13:72441315..72441454,-!p1@DACH1!1.99!189.20!DACH1;;chr11:31839488..31839515,-!p3@PAX6!1.99!95.99!PAX6;;chr5:50679228..50679288,+!p1@ISL1!1.95!88.43!ISL1;;chr7:127258139..127258173,-!p@chr7:127258139..127258173,-!1.95!87.67!PAX4;;chr18:55102628..55102646,+!p2@ONECUT2!1.92!81.88!ONECUT2;;chr8:76319876..76319926,+!p1@HNF4G!1.87!73.82!HNF4G;;chr20:42984330..42984364,+!p2@HNF4A!1.84!67.52!HNF4A;;chr11:31832658..31832681,-!p1@PAX6!1.83!66.01!PAX6;;chr18:55102598..55102623,+!p1@ONECUT2!1.80!61.47!ONECUT2;;chr20:22564895..22564910,-!p1@FOXA2!1.78!58.95!FOXA2;;chr2:219849897..219849928,-!p2@FEV!1.78!58.70!FEV;;chr1:214161272..214161322,+!p1@PROX1!1.75!76.84!PROX1;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!1.61!39.55!SEBOX;;chr13:72441506..72441562,-!p3@DACH1!1.59!38.29!DACH1;;chr11:16419037..16419064,-!p3@SOX6!1.59!37.54!SOX6;;chr1:201979743..201979762,+!p1@ELF3!1.55!34.51!ELF3;;chr7:156803329..156803362,-!p1@MNX1!1.54!34.01!MNX1;;chr6:10412392..10412409,-!p4@TFAP2A!1.53!37.54!TFAP2A;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.53!33.26!SEBOX;;chr8:53166899..53166914,-!p3@ST18!1.53!33.00!ST18;;chr8:53162037..53162058,-!p5@ST18!1.52!32.25!ST18;;chr16:85932760..85932775,+!p1@IRF8!1.51!31.24!IRF8;;chr11:61520075..61520136,+!p1@C11orf9!1.49!61.98!C11orf9;;chr6:10412600..10412637,-!p1@TFAP2A!1.49!49.38!TFAP2A;;chr1:10754477..10754517,-!p1@CASZ1!1.49!48.62!CASZ1;;chr3:157824202..157824211,-!p3@SHOX2!1.49!30.23!SHOX2;;chr11:31832610..31832639,-!p5@PAX6!1.49!29.73!PAX6;;chr14:33403881..33403924,+!p1@NPAS3!1.46!27.96!NPAS3;;chr13:72441074..72441172,-!p2@DACH1!1.43!25.95!DACH1;;chr12:103351444..103351461,+!p1@ASCL1!1.39!23.68!ASCL1;;chr7:127258190..127258201,-!p@chr7:127258190..127258201,-!1.37!22.67!PAX4;;chr7:127258120..127258138,-!p@chr7:127258120..127258138,-!1.37!22.42!PAX4;;chr11:31832581..31832601,-!p7@PAX6!1.37!22.42!PAX6;;chr20:22565370..22565388,-!p2@FOXA2!1.36!21.67!FOXA2;;chr11:2292226..2292270,-!p1@ASCL2!1.35!21.16!ASCL2;;chr8:41508303..41508308,-!p2@NKX6-3!1.34!20.66!NKX6-3;;chr2:239148671..239148686,-!p1@HES6!1.31!70.29!HES6;;chr17:53342311..53342400,+!p1@HLF!1.30!21.92!HLF;;chr1:27240455..27240474,-!p1@NR0B2!1.30!19.15!NR0B2;;chr2:242556880..242556899,-!p5@THAP4!1.30!19.15!THAP4;;chr11:31832807..31832823,-!p4@PAX6!1.30!18.89!PAX6;;chr1:209979467..209979494,-!p1@IRF6!1.29!20.91!IRF6;;chr8:11561684..11561751,+!p1@GATA4!1.28!17.89!GATA4;;chr13:41593493..41593506,-!p8@ELF1!1.27!17.64!ELF1;;chr6:19837592..19837621,+!p1@ID4!1.26!103.54!ID4;;chr13:28494109..28494122,+!p2@PDX1!1.26!17.13!PDX1;;chr7:27213893..27213954,-!p1@HOXA10!1.25!16.63!HOXA10;;chr4:149363494..149363543,-!p1@NR3C2!1.24!16.38!NR3C2;;chr1:201979703..201979721,+!p2@ELF3!1.23!15.87!ELF3;;chr7:73038867..73038878,-!p2@MLXIPL!1.23!15.87!MLXIPL;;chr11:31832862..31832884,-!p2@PAX6!1.18!14.11!PAX6;;chr13:28543285..28543314,-!p2@CDX2!1.18!14.11!CDX2;;chr5:50681985..50682031,+!p2@ISL1!1.17!13.86!ISL1;;chr1:165325006..165325012,-!p2@LMX1A!1.17!13.86!LMX1A;;chr11:31839453..31839462,-!p9@PAX6!1.16!13.35!PAX6;;chr13:28543431..28543487,-!p1@CDX2!1.15!13.10!CDX2;;chr17:46622440..46622477,-!p5@HOXB2!1.14!14.36!HOXB2;;chr2:242556900..242556916,-!p6@THAP4!1.13!12.60!THAP4;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.13!12.60!ZBED1;;chr18:56940611..56940660,-!p1@RAX!1.13!12.34!RAX;;chr9:3525867..3525902,-!p3@RFX3!1.12!41.82!RFX3;;chr2:176994408..176994492,+!p1@HOXD8!1.12!12.09!HOXD8;;chr7:27219833..27219845,-!p7@HOXA10!1.12!12.09!HOXA10;;chr10:131762504..131762555,-!p1@EBF3!1.11!11.84!EBF3;;chr20:39317868..39317884,-!p1@MAFB!1.10!137.56!MAFB;;chr2:46524897..46524911,+!p2@EPAS1!1.10!32.75!EPAS1;;chr11:31832687..31832704,-!p6@PAX6!1.10!11.59!PAX6;;chr5:158526917..158526932,-!p1@EBF1!1.09!28.47!EBF1;;chr1:41827095..41827155,+!p1@FOXO6!1.08!14.86!FOXO6;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.08!11.09!POU3F3;;chr4:149363475..149363492,-!p2@NR3C2!1.08!11.09!NR3C2;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.07!10.83!HOXC5;;chr3:157824437..157824459,-!p5@SHOX2!1.06!10.58!SHOX2;;chr16:67197654..67197716,+!p3@HSF4!1.05!10.33!HSF4;;chr2:182545282..182545294,-!p2@NEUROD1!1.04!10.08!NEUROD1;;chr13:37494275..37494304,-!p2@SMAD9!1.04!10.08!SMAD9;;chr5:124084493..124084524,-!p2@ZNF608!1.03!21.92!ZNF608;;chr2:182545296..182545307,-!p3@NEUROD1!1.03!9.83!NEUROD1;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!1.02!20.41!ZNF395;;chr6:117198376..117198383,+!p2@RFX6!1.02!9.57!RFX6;;chr7:149471046..149471070,-!p4@ZNF467!1.02!9.57!ZNF467;;chr9:20382446..20382493,-!p4@MLLT3!1.02!9.57!MLLT3;;chr7:9961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| |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0010316 | |||
| | |||
| | |||
| | |||
| | |||
|fonse_cell_line=FF:0101120,FF:0101967 | |fonse_cell_line=FF:0101120,FF:0101967 | ||
|fonse_cell_line_closure=FF:0101120,FF:0101967 | |fonse_cell_line_closure=FF:0101120,FF:0101967 | ||
Line 66: | Line 42: | ||
|fonse_treatment= | |fonse_treatment= | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|is_a=CL:0002535;;EFO:0002091;;FF: | |hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/argyrophil%2520small%2520cell%2520carcinoma%2520cell%2520line%253aTC-YIK.CNhs11725.10589-108D4.hg19.nobarcode.bam | ||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/argyrophil%2520small%2520cell%2520carcinoma%2520cell%2520line%253aTC-YIK.CNhs11725.10589-108D4.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/argyrophil%2520small%2520cell%2520carcinoma%2520cell%2520line%253aTC-YIK.CNhs11725.10589-108D4.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/argyrophil%2520small%2520cell%2520carcinoma%2520cell%2520line%253aTC-YIK.CNhs11725.10589-108D4.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/argyrophil%2520small%2520cell%2520carcinoma%2520cell%2520line%253aTC-YIK.CNhs11725.10589-108D4.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10589-108D4 | |||
|is_a=CL:0002535;;EFO:0002091;;FF:0000210;;FF:0100297;;FF:0101967 | |||
|is_obsolete= | |||
|library_id=CNhs11725 | |||
|library_id_phase_based=2:CNhs11725 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10589 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10589 | |||
|name=argyrophil small cell carcinoma cell line:TC-YIK | |||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
|part_of= | |part_of= | ||
|profile_cagescan=,,, | |||
|profile_hcage=CNhs11725,LSID819,release009,COMPLETED | |||
|profile_rnaseq= | |||
|profile_srnaseq=,,, | |||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.0841565801503228,0.0975809997847489,-0.179781132408765,0.117210816171492,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0238859847610804,0,0,0,0.0487904998923745,0,0.25608592029341,0,0,0.111518020457847,0,0,0,0,0,0,0,0,0,0,0,0,-0.228294289697694,0.0975809997847489,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0,0.0975809997847489,0.147482248994104,0,0,0.147130983023612,0,0,0,0,0,0,0,0,0.0975809997847489,0,0,0,0,0,0,0,0,0.0412380481419851,0.0487904998923745,0,0.0975809997847489,0,0,0,-0.140443645177397,0,0,0,0.059926269249047,0.131771934063091,0,0,0,0,0.343428712043505,0.331343614063706,0,0,0,0,0,0,0,0,0,0,0.244474610236709,0,0,0,0,0,0,0.124358437718145,0.177208995109508,0,0,-0.057439935027299,-0.0619424684363849,0,0,0.0975809997847489,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.343428712043505,0,0,0.177208995109508,0,0.0975809997847489,0,0,0.0975809997847489,0,0,0,-0.149597875500816,0.0487904998923745,-0.37650521896726,0.159190380307313,0,0,0.0043323250004155,0,0,0,0.0422035252203855,0.244474610236709,0,0,0.0975809997847489,0,-0.128119866952565,0,-0.0504125515893149,0.0975809997847489,0,0.0975809997847489,0,0.328374669696126,-0.305472230898407,0,-0.0229052997341174,0.234361261753417,0,0,0,0,-0.22145016944195,0,-0.120879483793741,-0.0827201683234173,1.09332433212772,0.296476476525591,-0.04680465889238,0,0,0,-0.584868773813248,-0.140417498317997,0,0,0.294297404058584,0.199866698749188,0,0,-0.391044581551635,0,-0.296801219417699,-0.0604397418968705,0,0.0986579369708597,0,0,0,0,0,0.0975809997847489,0,0.0975809997847489,0.399949866955586,0,0,-0.0574934668214365,0.15236526083389,0.0108706098950349,0.302705522830785,0.441464063281211,0,-0.404630828477883,0,0,-0.373286155956567,-0.202339029186585,0.107399042478179,0.675662173116268,0,-0.302389727009913,-0.144033201233346,0.145074766792619,-0.176425555024581,-0.147401849371139,-0.189981719549847,0,-0.328205585492923,0.0769501947059608,-0.137502126469395,-0.263904788848122,0,-0.399253996666189,-0.109689348038431,0,0.302705522830785,-0.0687008764653178,-0.0858075548037588,0,-0.118502648994435,0.140834176426918,0.0460881794327285,-0.0916423915024475,-0.39355087542415,0.119097114891405,-0.0508660738493958,-0.0395325284566706,-0.457436452896595,0,-0.0707484480476405,0,0,0,0.106158535079624,0.322681298707872,0.303568351604032,0,0.0302241425157952,0.0292367387073807,0,-0.376099350599466,-0.0498217040933013,0.479353857512859,0.191424854338734,-0.137313167590201,0.0975809997847489,0,0,0,0,0.469139671289763,-0.185448326468699,-0.135274561770796,0,-0.0079672749556229,0.185722313453539,-0.0401852781891986,0,0.342451253566599,0,0.0559696642001754,-0.0728623183102002,0,-0.110775109617305,-0.0657129780444216,-0.164990696339003,0.0190692578894739,0.383017236469386,-0.0995230428720394,-0.0525645480178438,0.059926269249047,-0.611730869680718,0.166268400233503,-0.0881268324752877,0.0975809997847489,-0.140443645177397,-0.279548264665938,-0.0763278999397194,-0.372688101556463,0,-0.523132832067396,0,-0.0136213882925521,0,0.11204124553275,-0.0610798939603816,-0.262080379471178,-0.0112293024878927,0,-0.213640787188364,0.40533036925458,0,-0.111235073812846,0,0.877961415074891,-0.150367083334639,0.346738339793421,-0.0602976664491965,0.0380324516015393,0.0520225595419403,-0.185509294189629,0,0.177208995109508,0.416345891482207,0.46617171594773,0,0.290491756512075,0.254019909606576,0.138885064145688,0.061237921674574,0.244474610236709,0,-0.166346480479866,0,0.0975809997847489,0.209817025158653,0,0.195961765018049,-0.253326341486756,0.0332161984944067,-0.108622809454255,0,0,0.176516050596292,0,0.097986756700087,0,0,0.00721950556456449,0,0,0,0,0.00470924292002897,0,0,0,0,0,0,0,0.0926304331622241,0.249737533983579,0,-0.0160131076506801,0,0.0975809997847489,0,0,0,0,0,0,-1.19238097186409,0.0390842928581051,-0.0254364158916714,0,0.0487904998923745,0,0,0.0287512076832342,0.0412380481419851,0,0.0453462886118764,0,0.088604497554754,0.0975809997847489,0,0.216564533041573,0,0,0.0487904998923745,0.088604497554754,0.0398505427310849,-0.0266067504138545,0,0,0,0.485478233017904,0,0,0,0,-0.226039187759998,0,0,-0.0554436725402837,0,-0.222058344400741,0.162892730689867,0,-0.15571809223477,-2.10521855035645,-0.0696798153204008,0,0,-0.261347131789888,0,0,-0.116549796850537,0,0.177208995109508,0.131858312950849,0,0,0,0,0.0975809997847489,0,-0.214314512399756,0,0,0,0,0,0,0,0,0,0,0,-0.348923355576783,0.152250553578198,0,0,0,0,0,0,0,-0.0241060230789031,0.24305432852966,0.0487904998923745,0,0,0,0,0.0975809997847489,0,0,-0.0299618763820307,0.244474610236709,0,0,0,0,0.147482248994104,0,0,0,0,0.136840632558235,0,0,-0.179781132408765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276630780920139,-0.187764415363916,0,0.0975809997847489,0,0.177208995109508,0,0.0975809997847489,0,-0.177252298421342,0,0.0975809997847489,0,0,-0.113884373708977,0,0,0,0.249247431772311,0,0.0841565801503228,0,0,0,0,0,0.244474610236709,0.199974933477793,0.088604497554754,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.71395498016402,0.0301042532088024,-0.109998520863402,-0.000521839700303506,0,0,-0.110391047514687,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177208995109508,0,0,0,0,0,0.0487904998923745,0.169400434545485,0,0,0,0,0,0,0,0.25608592029341,0,0,0.35821893870469,0,0,0.0298267954169728,0.0975809997847489,0,0,0.234240312496292,-0.160983094704793,0.0914297715002069,0,0,0,-0.054385572482455,0,0,0,0.0975809997847489,-0.0667773874189013,0.0975809997847489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0238859847610804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177208995109508,0,0,0,0,0,0,0,0,0,0.103383634171712,0.302705522830785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0487904998923745,0,0,0,0,0,0.0175625315161105,0,0,0,0.0313883805796652,0,0,0,0,0,0,0.0975809997847489,0,0.1772089951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| |||
|rna_box=108 | |||
|rna_catalog_number= | |||
|rna_concentration=1.65996 | |||
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0 | |||
|rna_lot_number= | |||
|rna_od260/230=1.85 | |||
|rna_od260/280=2.11 | |||
|rna_position=D4 | |||
|rna_rin= | |||
|rna_sample_type=total RNA | |||
|rna_tube_id=108D4 | |||
|rna_weight_ug=78.01812 | |||
|rnaseq_library_id=RDhi10073 | |||
|sample_age=31 | |||
|sample_category=cell lines | |||
|sample_cell_catalog=RCB0443 | |||
|sample_cell_line=TC-YIK | |||
|sample_cell_lot= | |||
|sample_cell_type=unclassifiable | |||
|sample_collaboration=Yukio Nakamura (RIKEN BRC) | |||
|sample_company=RIKEN Bioresource centre | |||
|sample_description= | |||
|sample_dev_stage= | |||
|sample_disease=argyrophil small cell carcinoma | |||
|sample_donor(cell lot)= | |||
|sample_ethnicity=J | |||
|sample_experimental_condition= | |||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.6126786470618e-247!GO:0043226;organelle;1.78205504007087e-218!GO:0043229;intracellular organelle;5.2747508541334e-218!GO:0043231;intracellular membrane-bound organelle;7.0885230505836e-212!GO:0043227;membrane-bound organelle;1.18394234171253e-211!GO:0044422;organelle part;5.69342756259729e-170!GO:0044446;intracellular organelle part;1.49065700955785e-168!GO:0005737;cytoplasm;6.24023627714267e-166!GO:0044444;cytoplasmic part;2.74474769404046e-136!GO:0032991;macromolecular complex;3.46292946807651e-113!GO:0044237;cellular metabolic process;8.5252608697168e-98!GO:0044238;primary metabolic process;5.43339970673261e-96!GO:0030529;ribonucleoprotein complex;9.19032046380507e-91!GO:0044428;nuclear part;7.27254887325083e-85!GO:0043170;macromolecule metabolic process;8.49748235213157e-85!GO:0005634;nucleus;2.28106692171722e-82!GO:0005739;mitochondrion;2.87996407008564e-82!GO:0043233;organelle lumen;7.51558072129698e-81!GO:0031974;membrane-enclosed lumen;7.51558072129698e-81!GO:0003723;RNA binding;1.76357170417557e-73!GO:0043234;protein complex;9.52163322809555e-59!GO:0044429;mitochondrial part;3.41155309295561e-56!GO:0005840;ribosome;8.92070808304867e-56!GO:0031090;organelle membrane;2.31030200994654e-55!GO:0006396;RNA processing;3.28142921326946e-54!GO:0043283;biopolymer metabolic process;1.00868553753736e-49!GO:0006412;translation;1.0289346696626e-49!GO:0005515;protein binding;9.20382955777023e-49!GO:0031967;organelle envelope;4.9945288838254e-48!GO:0003735;structural constituent of ribosome;6.97237706185682e-48!GO:0031975;envelope;1.35680015798522e-47!GO:0015031;protein transport;3.60618608224224e-46!GO:0031981;nuclear lumen;4.24487191903778e-46!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.51530014148358e-46!GO:0033036;macromolecule localization;1.02716086329211e-45!GO:0009058;biosynthetic process;1.08126692743749e-45!GO:0010467;gene expression;2.9725893814548e-45!GO:0016043;cellular component organization and biogenesis;2.45104603278098e-44!GO:0016071;mRNA metabolic process;4.88472713260671e-44!GO:0044249;cellular biosynthetic process;5.9975549715172e-44!GO:0033279;ribosomal subunit;5.91059693990837e-42!GO:0008104;protein localization;1.76912395116909e-41!GO:0045184;establishment of protein localization;2.15894385523558e-41!GO:0009059;macromolecule biosynthetic process;2.11849287855006e-40!GO:0008380;RNA splicing;3.69463777492455e-40!GO:0019538;protein metabolic process;6.37182570840007e-40!GO:0006397;mRNA processing;5.89277777161214e-39!GO:0006996;organelle organization and biogenesis;4.65120888856633e-38!GO:0044260;cellular macromolecule metabolic process;1.48044750736641e-37!GO:0044267;cellular protein metabolic process;1.8924882972173e-36!GO:0043228;non-membrane-bound organelle;1.8924882972173e-36!GO:0043232;intracellular non-membrane-bound organelle;1.8924882972173e-36!GO:0046907;intracellular transport;1.24600919178447e-34!GO:0005740;mitochondrial envelope;1.5666868075555e-33!GO:0019866;organelle inner membrane;4.1214280377825e-33!GO:0006259;DNA metabolic process;6.35419737736588e-33!GO:0065003;macromolecular complex assembly;1.89093424551595e-32!GO:0005829;cytosol;2.82465477957467e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.03752307899377e-32!GO:0005743;mitochondrial inner membrane;7.44449237323893e-32!GO:0031966;mitochondrial membrane;1.71437190653962e-31!GO:0003676;nucleic acid binding;1.61885078920772e-30!GO:0005654;nucleoplasm;1.43143095241228e-29!GO:0005681;spliceosome;2.9435459147602e-29!GO:0022607;cellular component assembly;4.29655833207674e-29!GO:0000166;nucleotide binding;7.41172296609757e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.25768686040736e-28!GO:0006886;intracellular protein transport;3.8351030311499e-28!GO:0051649;establishment of cellular localization;4.29811502930702e-28!GO:0031980;mitochondrial lumen;1.28588842632245e-27!GO:0005759;mitochondrial matrix;1.28588842632245e-27!GO:0051641;cellular localization;3.12281394382432e-27!GO:0006119;oxidative phosphorylation;6.5952282921014e-25!GO:0044451;nucleoplasm part;6.31617233645746e-24!GO:0007049;cell cycle;8.05345713223086e-24!GO:0044455;mitochondrial membrane part;1.86477541224145e-23!GO:0012505;endomembrane system;2.72224013812822e-22!GO:0044445;cytosolic part;4.74177194200847e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.71899799502256e-22!GO:0016462;pyrophosphatase activity;6.06811549306468e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;8.01811986052778e-22!GO:0015935;small ribosomal subunit;1.04230321999511e-21!GO:0015934;large ribosomal subunit;2.10173838566179e-21!GO:0016070;RNA metabolic process;3.0150713373054e-21!GO:0017111;nucleoside-triphosphatase activity;9.56862988286693e-21!GO:0006974;response to DNA damage stimulus;3.33416047744891e-20!GO:0044265;cellular macromolecule catabolic process;5.09958406926272e-20!GO:0005694;chromosome;6.54046304089431e-20!GO:0006457;protein folding;7.89094327592484e-20!GO:0022618;protein-RNA complex assembly;8.82224397943936e-20!GO:0032553;ribonucleotide binding;1.34507713104351e-19!GO:0032555;purine ribonucleotide binding;1.34507713104351e-19!GO:0017076;purine nucleotide binding;2.45006600547907e-19!GO:0016874;ligase activity;3.69781622458562e-19!GO:0044248;cellular catabolic process;4.11930673041364e-19!GO:0051276;chromosome organization and biogenesis;9.1303755375168e-19!GO:0005746;mitochondrial respiratory chain;2.19391480093188e-18!GO:0006281;DNA repair;4.33409372697922e-18!GO:0008135;translation factor activity, nucleic acid binding;8.89278670762476e-18!GO:0005524;ATP binding;1.11143027316556e-17!GO:0032559;adenyl ribonucleotide binding;1.13210963123222e-17!GO:0006512;ubiquitin cycle;1.25457954905738e-17!GO:0016887;ATPase activity;1.81164034159158e-17!GO:0044427;chromosomal part;1.94025308290209e-17!GO:0030554;adenyl nucleotide binding;3.33906494478335e-17!GO:0042623;ATPase activity, coupled;3.37964668862659e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;4.52708298027551e-17!GO:0005761;mitochondrial ribosome;4.87936631358144e-17!GO:0000313;organellar ribosome;4.87936631358144e-17!GO:0022402;cell cycle process;4.90491619081351e-17!GO:0006511;ubiquitin-dependent protein catabolic process;5.72038524562043e-17!GO:0019941;modification-dependent protein catabolic process;8.10634817038863e-17!GO:0043632;modification-dependent macromolecule catabolic process;8.10634817038863e-17!GO:0044257;cellular protein catabolic process;1.24793024993807e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.25553708737204e-16!GO:0003954;NADH dehydrogenase activity;1.25553708737204e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.25553708737204e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.31555573575988e-16!GO:0009057;macromolecule catabolic process;3.03389391414397e-16!GO:0051186;cofactor metabolic process;3.49147576557481e-16!GO:0005730;nucleolus;5.72337571524575e-16!GO:0051082;unfolded protein binding;7.57641254275649e-16!GO:0043285;biopolymer catabolic process;1.9723342452889e-15!GO:0005635;nuclear envelope;2.11377435016661e-15!GO:0042775;organelle ATP synthesis coupled electron transport;4.7292906774544e-15!GO:0042773;ATP synthesis coupled electron transport;4.7292906774544e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.66369075584745e-15!GO:0031965;nuclear membrane;9.7768498391855e-15!GO:0005794;Golgi apparatus;1.00307828461338e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.6860648020577e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;1.83110178673533e-14!GO:0000375;RNA splicing, via transesterification reactions;1.83110178673533e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.83110178673533e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.2311433940731e-14!GO:0030964;NADH dehydrogenase complex (quinone);2.24289108164226e-14!GO:0045271;respiratory chain complex I;2.24289108164226e-14!GO:0005747;mitochondrial respiratory chain complex I;2.24289108164226e-14!GO:0005783;endoplasmic reticulum;4.05577430462675e-14!GO:0008134;transcription factor binding;4.47511149365867e-14!GO:0009719;response to endogenous stimulus;5.01469206110128e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;5.80372940341989e-14!GO:0044432;endoplasmic reticulum part;6.79192967405707e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.21018401888295e-14!GO:0000278;mitotic cell cycle;1.06555117842488e-13!GO:0000502;proteasome complex (sensu Eukaryota);1.44257032703085e-13!GO:0016604;nuclear body;1.7314678178658e-13!GO:0030163;protein catabolic process;2.35352376965954e-13!GO:0006732;coenzyme metabolic process;2.41024995101871e-13!GO:0006323;DNA packaging;2.43533250982827e-13!GO:0006605;protein targeting;2.61103221000325e-13!GO:0042254;ribosome biogenesis and assembly;3.95617697824249e-13!GO:0004386;helicase activity;7.95460304300493e-13!GO:0022403;cell cycle phase;8.00987693807759e-13!GO:0003743;translation initiation factor activity;1.36120508344389e-12!GO:0006260;DNA replication;1.37329945783959e-12!GO:0044453;nuclear membrane part;1.51037292470917e-12!GO:0006413;translational initiation;2.05048035859341e-12!GO:0048193;Golgi vesicle transport;2.8835150043589e-12!GO:0006446;regulation of translational initiation;2.96336288375278e-12!GO:0016192;vesicle-mediated transport;5.12107873199255e-12!GO:0005643;nuclear pore;5.43622204584335e-12!GO:0009056;catabolic process;6.75504644863274e-12!GO:0006163;purine nucleotide metabolic process;1.269796524287e-11!GO:0009259;ribonucleotide metabolic process;1.28788668546052e-11!GO:0051301;cell division;1.54888031638637e-11!GO:0009055;electron carrier activity;1.75848093531396e-11!GO:0043412;biopolymer modification;2.08103006506325e-11!GO:0050657;nucleic acid transport;2.20485883741658e-11!GO:0051236;establishment of RNA localization;2.20485883741658e-11!GO:0050658;RNA transport;2.20485883741658e-11!GO:0006403;RNA localization;2.23465858110697e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.48816389398741e-11!GO:0048770;pigment granule;3.50642544809391e-11!GO:0042470;melanosome;3.50642544809391e-11!GO:0019829;cation-transporting ATPase activity;4.84851829733177e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.86883402862383e-11!GO:0000279;M phase;5.17512117282911e-11!GO:0016607;nuclear speck;6.37113928644737e-11!GO:0015630;microtubule cytoskeleton;6.96485362761402e-11!GO:0006399;tRNA metabolic process;7.75958870888143e-11!GO:0009150;purine ribonucleotide metabolic process;8.71550511228196e-11!GO:0006164;purine nucleotide biosynthetic process;9.21038414900058e-11!GO:0000087;M phase of mitotic cell cycle;9.30462677931162e-11!GO:0005789;endoplasmic reticulum membrane;1.02407244324448e-10!GO:0008565;protein transporter activity;1.26006705562345e-10!GO:0009060;aerobic respiration;1.84402385836705e-10!GO:0065002;intracellular protein transport across a membrane;1.85919106469002e-10!GO:0009260;ribonucleotide biosynthetic process;1.90547474934578e-10!GO:0007067;mitosis;2.15559175142646e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.49414557995608e-10!GO:0045333;cellular respiration;4.6366843218473e-10!GO:0009199;ribonucleoside triphosphate metabolic process;6.17457123438133e-10!GO:0009152;purine ribonucleotide biosynthetic process;6.32876635479231e-10!GO:0046930;pore complex;6.51122982800594e-10!GO:0009141;nucleoside triphosphate metabolic process;7.24138191463652e-10!GO:0006464;protein modification process;9.68243581684583e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.24429767139387e-09!GO:0009144;purine nucleoside triphosphate metabolic process;1.24429767139387e-09!GO:0051028;mRNA transport;1.31709866699358e-09!GO:0000785;chromatin;1.34714987655726e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.82373282349177e-09!GO:0016568;chromatin modification;1.83097571719524e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.90471287369588e-09!GO:0008026;ATP-dependent helicase activity;1.95167979294394e-09!GO:0006333;chromatin assembly or disassembly;1.97197969116876e-09!GO:0009142;nucleoside triphosphate biosynthetic process;2.15621615831132e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.15621615831132e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.30254607927459e-09!GO:0065004;protein-DNA complex assembly;2.92570423029578e-09!GO:0015986;ATP synthesis coupled proton transport;4.29254826909209e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.29254826909209e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.36217463193492e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.36217463193492e-09!GO:0005793;ER-Golgi intermediate compartment;4.43606485859395e-09!GO:0051188;cofactor biosynthetic process;5.18827160316211e-09!GO:0030532;small nuclear ribonucleoprotein complex;5.56466316346418e-09!GO:0003712;transcription cofactor activity;7.4557334650211e-09!GO:0006461;protein complex assembly;1.46527637881205e-08!GO:0006364;rRNA processing;1.87851642278119e-08!GO:0006913;nucleocytoplasmic transport;2.12619869461126e-08!GO:0046034;ATP metabolic process;2.3229054920773e-08!GO:0008639;small protein conjugating enzyme activity;2.7030703249682e-08!GO:0016072;rRNA metabolic process;2.83739232016579e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.97373374092796e-08!GO:0004812;aminoacyl-tRNA ligase activity;2.97373374092796e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.97373374092796e-08!GO:0044431;Golgi apparatus part;3.08829975044705e-08!GO:0004842;ubiquitin-protein ligase activity;4.2148410290086e-08!GO:0006099;tricarboxylic acid cycle;4.2148410290086e-08!GO:0046356;acetyl-CoA catabolic process;4.2148410290086e-08!GO:0051169;nuclear transport;4.23399449716471e-08!GO:0043687;post-translational protein modification;4.43082494468769e-08!GO:0043566;structure-specific DNA binding;4.47593222818913e-08!GO:0015078;hydrogen ion transmembrane transporter activity;5.12257621811073e-08!GO:0006261;DNA-dependent DNA replication;5.7359758343442e-08!GO:0006084;acetyl-CoA metabolic process;5.7359758343442e-08!GO:0045045;secretory pathway;5.97210240550549e-08!GO:0006091;generation of precursor metabolites and energy;6.4568103761327e-08!GO:0016787;hydrolase activity;6.55528285426795e-08!GO:0006754;ATP biosynthetic process;6.97623194022217e-08!GO:0006753;nucleoside phosphate metabolic process;6.97623194022217e-08!GO:0043038;amino acid activation;8.02785841469473e-08!GO:0006418;tRNA aminoacylation for protein translation;8.02785841469473e-08!GO:0043039;tRNA aminoacylation;8.02785841469473e-08!GO:0009117;nucleotide metabolic process;1.05601561285403e-07!GO:0015980;energy derivation by oxidation of organic compounds;1.08562919794769e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.14489236559542e-07!GO:0019787;small conjugating protein ligase activity;1.14572557166117e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.35813492339198e-07!GO:0009108;coenzyme biosynthetic process;1.35813492339198e-07!GO:0016779;nucleotidyltransferase activity;1.36357294357714e-07!GO:0016881;acid-amino acid ligase activity;1.48979406823591e-07!GO:0003697;single-stranded DNA binding;1.51626363603787e-07!GO:0051726;regulation of cell cycle;1.64551033492317e-07!GO:0007005;mitochondrion organization and biogenesis;1.9709715482841e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.03845962884418e-07!GO:0032446;protein modification by small protein conjugation;2.04421395460769e-07!GO:0016853;isomerase activity;2.1845587986438e-07!GO:0000074;regulation of progression through cell cycle;2.41784173122327e-07!GO:0000245;spliceosome assembly;2.54317980569223e-07!GO:0031982;vesicle;2.56165351143105e-07!GO:0005768;endosome;3.179623591814e-07!GO:0031410;cytoplasmic vesicle;3.66738066838761e-07!GO:0006366;transcription from RNA polymerase II promoter;3.71167354466363e-07!GO:0016567;protein ubiquitination;4.80919341543247e-07!GO:0045259;proton-transporting ATP synthase complex;4.92357924569643e-07!GO:0006752;group transfer coenzyme metabolic process;6.14468122025751e-07!GO:0017038;protein import;6.38868134373359e-07!GO:0016740;transferase activity;7.28592495862515e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.55161080705054e-07!GO:0009109;coenzyme catabolic process;7.76706836463228e-07!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;8.41912560970118e-07!GO:0015399;primary active transmembrane transporter activity;8.41912560970118e-07!GO:0003724;RNA helicase activity;1.07113158957415e-06!GO:0006334;nucleosome assembly;1.4159226890959e-06!GO:0031497;chromatin assembly;1.51361053172381e-06!GO:0031988;membrane-bound vesicle;1.73319171776132e-06!GO:0005667;transcription factor complex;1.74150227203167e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.88742517183828e-06!GO:0051187;cofactor catabolic process;1.93559078871787e-06!GO:0000314;organellar small ribosomal subunit;2.24379091744146e-06!GO:0005763;mitochondrial small ribosomal subunit;2.24379091744146e-06!GO:0016023;cytoplasmic membrane-bound vesicle;2.36180253281218e-06!GO:0000151;ubiquitin ligase complex;2.4526723628084e-06!GO:0048475;coated membrane;2.47758672970673e-06!GO:0030117;membrane coat;2.47758672970673e-06!GO:0005839;proteasome core complex (sensu Eukaryota);2.73078245096836e-06!GO:0043623;cellular protein complex assembly;3.00588062158432e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.70816886364771e-06!GO:0030120;vesicle coat;3.75002220800398e-06!GO:0030662;coated vesicle membrane;3.75002220800398e-06!GO:0016491;oxidoreductase activity;4.00102249846043e-06!GO:0000139;Golgi membrane;4.73574748908007e-06!GO:0005874;microtubule;5.50482795776666e-06!GO:0005762;mitochondrial large ribosomal subunit;8.01680348238919e-06!GO:0000315;organellar large ribosomal subunit;8.01680348238919e-06!GO:0004298;threonine endopeptidase activity;9.24384380597349e-06!GO:0006613;cotranslational protein targeting to membrane;9.61184192811072e-06!GO:0003899;DNA-directed RNA polymerase activity;1.21125367869278e-05!GO:0044262;cellular carbohydrate metabolic process;1.3066195002892e-05!GO:0005657;replication fork;1.36535103410703e-05!GO:0043492;ATPase activity, coupled to movement of substances;1.37345495053925e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;1.7645406175193e-05!GO:0043021;ribonucleoprotein binding;2.6039547930233e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;2.60903515594493e-05!GO:0005813;centrosome;2.63633123586958e-05!GO:0008654;phospholipid biosynthetic process;3.03606608618032e-05!GO:0048471;perinuclear region of cytoplasm;3.03606608618032e-05!GO:0000775;chromosome, pericentric region;3.25408232251719e-05!GO:0007017;microtubule-based process;3.4859244323378e-05!GO:0006414;translational elongation;3.61102542108994e-05!GO:0005770;late endosome;3.7954584096155e-05!GO:0005798;Golgi-associated vesicle;3.81628951473436e-05!GO:0044440;endosomal part;4.11447993527067e-05!GO:0010008;endosome membrane;4.11447993527067e-05!GO:0008186;RNA-dependent ATPase activity;4.43231994970838e-05!GO:0005815;microtubule organizing center;4.54961200938305e-05!GO:0032940;secretion by cell;4.83351381304135e-05!GO:0003713;transcription coactivator activity;4.96342914283612e-05!GO:0008094;DNA-dependent ATPase activity;5.4957684028558e-05!GO:0016859;cis-trans isomerase activity;5.64052734733201e-05!GO:0009165;nucleotide biosynthetic process;5.64485338485446e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;5.841648602807e-05!GO:0006839;mitochondrial transport;6.33279121206833e-05!GO:0007051;spindle organization and biogenesis;6.52415346745653e-05!GO:0016363;nuclear matrix;6.91639364967579e-05!GO:0051427;hormone receptor binding;8.40581730728124e-05!GO:0016741;transferase activity, transferring one-carbon groups;0.000105705552724728!GO:0043284;biopolymer biosynthetic process;0.000129250577315464!GO:0030867;rough endoplasmic reticulum membrane;0.000133132990032062!GO:0004004;ATP-dependent RNA helicase activity;0.000142804493709843!GO:0006818;hydrogen transport;0.000148219157929255!GO:0003746;translation elongation factor activity;0.000149553897526593!GO:0015992;proton transport;0.000149553897526593!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000164266969037822!GO:0008168;methyltransferase activity;0.000165199204598634!GO:0035257;nuclear hormone receptor binding;0.000168144468360345!GO:0000228;nuclear chromosome;0.000170454912066859!GO:0003690;double-stranded DNA binding;0.000193865453475401!GO:0051168;nuclear export;0.000195717356334193!GO:0031072;heat shock protein binding;0.000198170204317428!GO:0006793;phosphorus metabolic process;0.000199347092327628!GO:0006796;phosphate metabolic process;0.000199347092327628!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000225194588678113!GO:0003729;mRNA binding;0.000230465204049642!GO:0007059;chromosome segregation;0.000248364872120575!GO:0016564;transcription repressor activity;0.000250145231246676!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000260194105532869!GO:0008033;tRNA processing;0.000264523544870292!GO:0005788;endoplasmic reticulum lumen;0.000281387320193142!GO:0051329;interphase of mitotic cell cycle;0.000295868887826642!GO:0031324;negative regulation of cellular metabolic process;0.000308975025611415!GO:0045786;negative regulation of progression through cell cycle;0.000317315586139871!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000319192833572662!GO:0019752;carboxylic acid metabolic process;0.000353432974066362!GO:0005525;GTP binding;0.000353432974066362!GO:0005819;spindle;0.000372311049170205!GO:0043681;protein import into mitochondrion;0.000397445268420509!GO:0044454;nuclear chromosome part;0.000425216669837113!GO:0050662;coenzyme binding;0.0004258504430182!GO:0000075;cell cycle checkpoint;0.000434361766370504!GO:0006612;protein targeting to membrane;0.000436216632197022!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000445517148080697!GO:0006082;organic acid metabolic process;0.000459664924079204!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000462280810842013!GO:0007010;cytoskeleton organization and biogenesis;0.000462280810842013!GO:0009892;negative regulation of metabolic process;0.00048621450271583!GO:0008022;protein C-terminus binding;0.00048621450271583!GO:0051325;interphase;0.000517598762658109!GO:0008610;lipid biosynthetic process;0.000540630415016749!GO:0051170;nuclear import;0.000562300233442143!GO:0006338;chromatin remodeling;0.000569202242113368!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000574094415853748!GO:0019222;regulation of metabolic process;0.000588439835490494!GO:0051539;4 iron, 4 sulfur cluster binding;0.000598317714765045!GO:0003714;transcription corepressor activity;0.000628632603238921!GO:0003684;damaged DNA binding;0.000657192024395254!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000668629976123884!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000668629976123884!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000668629976123884!GO:0051920;peroxiredoxin activity;0.00068988994473346!GO:0004527;exonuclease activity;0.000704117502339504!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000710716714571564!GO:0022890;inorganic cation transmembrane transporter activity;0.000721363159555273!GO:0000786;nucleosome;0.000729490589291846!GO:0006595;polyamine metabolic process;0.000752461815487867!GO:0016126;sterol biosynthetic process;0.000762793463550878!GO:0045454;cell redox homeostasis;0.000777377521652555!GO:0005975;carbohydrate metabolic process;0.000789231460367103!GO:0005791;rough endoplasmic reticulum;0.000790317965258389!GO:0050794;regulation of cellular process;0.000795840088598637!GO:0046467;membrane lipid biosynthetic process;0.000829674533620677!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000847551838454545!GO:0006626;protein targeting to mitochondrion;0.000889212828609866!GO:0051246;regulation of protein metabolic process;0.000896435971645757!GO:0000059;protein import into nucleus, docking;0.000905952895370918!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.000932893742532626!GO:0015002;heme-copper terminal oxidase activity;0.000932893742532626!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.000932893742532626!GO:0004129;cytochrome-c oxidase activity;0.000932893742532626!GO:0015631;tubulin binding;0.000934639865259784!GO:0006007;glucose catabolic process;0.000955565545426028!GO:0005769;early endosome;0.000959703700194592!GO:0005773;vacuole;0.000974979536377356!GO:0006606;protein import into nucleus;0.000985318245411697!GO:0046474;glycerophospholipid biosynthetic process;0.000987100492681599!GO:0032508;DNA duplex unwinding;0.000987100492681599!GO:0032392;DNA geometric change;0.000987100492681599!GO:0003711;transcription elongation regulator activity;0.000990106485865816!GO:0016310;phosphorylation;0.000990106485865816!GO:0000776;kinetochore;0.000990106485865816!GO:0016563;transcription activator activity;0.0010660461770021!GO:0019318;hexose metabolic process;0.0011401753436926!GO:0006302;double-strand break repair;0.00115792987480081!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00116541201712067!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00116541201712067!GO:0006402;mRNA catabolic process;0.001173590235669!GO:0030658;transport vesicle membrane;0.0011857536122444!GO:0031252;leading edge;0.0011857536122444!GO:0005684;U2-dependent spliceosome;0.00119043662948196!GO:0046489;phosphoinositide biosynthetic process;0.00123683314166244!GO:0005996;monosaccharide metabolic process;0.00124097689408223!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00129981689349746!GO:0051287;NAD binding;0.00134522308212074!GO:0048500;signal recognition particle;0.00134522308212074!GO:0005875;microtubule associated complex;0.00144091639261117!GO:0003702;RNA polymerase II transcription factor activity;0.00144721641293812!GO:0006891;intra-Golgi vesicle-mediated transport;0.00150835413521711!GO:0005048;signal sequence binding;0.0015285160471495!GO:0030176;integral to endoplasmic reticulum membrane;0.0015285160471495!GO:0051087;chaperone binding;0.00154430080413367!GO:0006383;transcription from RNA polymerase III promoter;0.00160575071403177!GO:0006006;glucose metabolic process;0.0016060503419988!GO:0006405;RNA export from nucleus;0.00169605718092189!GO:0033116;ER-Golgi intermediate compartment membrane;0.0017206249947329!GO:0032561;guanyl ribonucleotide binding;0.0017206249947329!GO:0019001;guanyl nucleotide binding;0.0017206249947329!GO:0051789;response to protein stimulus;0.00179859959571883!GO:0006986;response to unfolded protein;0.00179859959571883!GO:0003682;chromatin binding;0.00184702276626789!GO:0030133;transport vesicle;0.00186081877924798!GO:0006268;DNA unwinding during replication;0.00186889204431328!GO:0009116;nucleoside metabolic process;0.00191835875602751!GO:0051540;metal cluster binding;0.00208367052372452!GO:0051536;iron-sulfur cluster binding;0.00208367052372452!GO:0006066;alcohol metabolic process;0.00230706674730362!GO:0046483;heterocycle metabolic process;0.00246176632623593!GO:0005885;Arp2/3 protein complex;0.00252556677356008!GO:0043069;negative regulation of programmed cell death;0.00257742083143081!GO:0030660;Golgi-associated vesicle membrane;0.0026377439301153!GO:0030880;RNA polymerase complex;0.00266452420360578!GO:0000096;sulfur amino acid metabolic process;0.00266452420360578!GO:0051052;regulation of DNA metabolic process;0.00276073865049273!GO:0031124;mRNA 3'-end processing;0.0028681428789891!GO:0006352;transcription initiation;0.00295197656096769!GO:0008017;microtubule binding;0.00302762245623828!GO:0022406;membrane docking;0.00307919880841127!GO:0048278;vesicle docking;0.00307919880841127!GO:0006695;cholesterol biosynthetic process;0.00317172799375599!GO:0008312;7S RNA binding;0.00324174000125873!GO:0006401;RNA catabolic process;0.00335735750193322!GO:0042802;identical protein binding;0.0033645729712074!GO:0043066;negative regulation of apoptosis;0.00344865236491672!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00344865236491672!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00352727883883298!GO:0045047;protein targeting to ER;0.00352727883883298!GO:0019899;enzyme binding;0.00358579795604226!GO:0003678;DNA helicase activity;0.00359289183979028!GO:0048523;negative regulation of cellular process;0.00382523679676171!GO:0006904;vesicle docking during exocytosis;0.00382700405186936!GO:0030134;ER to Golgi transport vesicle;0.00413948764234799!GO:0016272;prefoldin complex;0.00421084673935151!GO:0030118;clathrin coat;0.00421172605448341!GO:0006096;glycolysis;0.00423339009975036!GO:0048037;cofactor binding;0.00440270855773093!GO:0035258;steroid hormone receptor binding;0.00440270855773093!GO:0007006;mitochondrial membrane organization and biogenesis;0.00463831922155525!GO:0012501;programmed cell death;0.00468983841470712!GO:0006378;mRNA polyadenylation;0.00488926263117356!GO:0006915;apoptosis;0.00502828446990925!GO:0003924;GTPase activity;0.00517387493643637!GO:0006284;base-excision repair;0.00559500983957532!GO:0005758;mitochondrial intermembrane space;0.00566210343342781!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00566210343342781!GO:0000428;DNA-directed RNA polymerase complex;0.00566210343342781!GO:0005853;eukaryotic translation elongation factor 1 complex;0.00615774433248462!GO:0030127;COPII vesicle coat;0.00618248064930722!GO:0012507;ER to Golgi transport vesicle membrane;0.00618248064930722!GO:0009112;nucleobase metabolic process;0.00625685487274165!GO:0000323;lytic vacuole;0.00630446849109503!GO:0005764;lysosome;0.00630446849109503!GO:0006289;nucleotide-excision repair;0.006514614742261!GO:0000086;G2/M transition of mitotic cell cycle;0.00662206486108965!GO:0043022;ribosome binding;0.00668044189358988!GO:0031323;regulation of cellular metabolic process;0.00686538071102339!GO:0006310;DNA recombination;0.00687027183378022!GO:0006350;transcription;0.00707810414820629!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00748627334810239!GO:0046128;purine ribonucleoside metabolic process;0.00765300335837419!GO:0042278;purine nucleoside metabolic process;0.00765300335837419!GO:0005869;dynactin complex;0.00765467351354472!GO:0000209;protein polyubiquitination;0.00768224380994252!GO:0000339;RNA cap binding;0.00781796093531618!GO:0016251;general RNA polymerase II transcription factor activity;0.00782950902506563!GO:0006520;amino acid metabolic process;0.00789849601102916!GO:0006270;DNA replication initiation;0.00789849601102916!GO:0032259;methylation;0.00793550174071193!GO:0000049;tRNA binding;0.00802261920457456!GO:0007052;mitotic spindle organization and biogenesis;0.00807930592418197!GO:0006144;purine base metabolic process;0.00837035998583004!GO:0043596;nuclear replication fork;0.00842323874512223!GO:0000793;condensed chromosome;0.00850103400314443!GO:0007264;small GTPase mediated signal transduction;0.00852944994469103!GO:0004518;nuclease activity;0.00876034458242927!GO:0008097;5S rRNA binding;0.00898789496074564!GO:0031123;RNA 3'-end processing;0.00941621713913313!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00942960292561073!GO:0007050;cell cycle arrest;0.00948064781919796!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.00964047495756669!GO:0042393;histone binding;0.00971411162360548!GO:0000792;heterochromatin;0.00991035065657221!GO:0006672;ceramide metabolic process;0.00992695022649688!GO:0043130;ubiquitin binding;0.00998263365771502!GO:0032182;small conjugating protein binding;0.00998263365771502!GO:0005832;chaperonin-containing T-complex;0.00998767000556729!GO:0051252;regulation of RNA metabolic process;0.0100567701339854!GO:0030137;COPI-coated vesicle;0.0100909223628487!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0101471844975582!GO:0006497;protein amino acid lipidation;0.0103493763231688!GO:0044452;nucleolar part;0.0103647224112095!GO:0031647;regulation of protein stability;0.0104809430699631!GO:0046164;alcohol catabolic process;0.0105187306680973!GO:0031901;early endosome membrane;0.0106750910520456!GO:0031970;organelle envelope lumen;0.0107735856538851!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0109292564319213!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.011016948005615!GO:0005876;spindle microtubule;0.0115746285336354!GO:0031902;late endosome membrane;0.011667463484453!GO:0046365;monosaccharide catabolic process;0.0123153605200121!GO:0030663;COPI coated vesicle membrane;0.0124051450746881!GO:0030126;COPI vesicle coat;0.0124051450746881!GO:0006506;GPI anchor biosynthetic process;0.0124051450746881!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0128762650586626!GO:0008139;nuclear localization sequence binding;0.0135677201746379!GO:0006596;polyamine biosynthetic process;0.013878076999818!GO:0006354;RNA elongation;0.0139403264817507!GO:0008180;signalosome;0.0141001444654864!GO:0004576;oligosaccharyl transferase activity;0.0143965754642445!GO:0016584;nucleosome positioning;0.0145390544926571!GO:0008287;protein serine/threonine phosphatase complex;0.0149519582109573!GO:0030521;androgen receptor signaling pathway;0.0151581385094551!GO:0008219;cell death;0.0152002720673826!GO:0016265;death;0.0152002720673826!GO:0042981;regulation of apoptosis;0.0153580828062892!GO:0019783;small conjugating protein-specific protease activity;0.0154843473117711!GO:0006519;amino acid and derivative metabolic process;0.0155098385250323!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0155768557061095!GO:0046519;sphingoid metabolic process;0.0156056182561735!GO:0045947;negative regulation of translational initiation;0.0156584332082828!GO:0006505;GPI anchor metabolic process;0.0157012898823967!GO:0006643;membrane lipid metabolic process;0.0159062701855989!GO:0006376;mRNA splice site selection;0.016098762050694!GO:0000389;nuclear mRNA 3'-splice site recognition;0.016098762050694!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0163016296261056!GO:0043067;regulation of programmed cell death;0.0165942610346808!GO:0000287;magnesium ion binding;0.0168292541338859!GO:0007021;tubulin folding;0.016990280606503!GO:0005083;small GTPase regulator activity;0.0173633698233819!GO:0006916;anti-apoptosis;0.0175229270707705!GO:0006400;tRNA modification;0.0175696677567031!GO:0042158;lipoprotein biosynthetic process;0.0176861236840872!GO:0009303;rRNA transcription;0.0177368320517078!GO:0007093;mitotic cell cycle checkpoint;0.0178614632747091!GO:0009083;branched chain family amino acid catabolic process;0.018041440934988!GO:0004674;protein serine/threonine kinase activity;0.0181085999273002!GO:0000910;cytokinesis;0.0182906172203639!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0186736425252106!GO:0019843;rRNA binding;0.0186736425252106!GO:0006650;glycerophospholipid metabolic process;0.01875158344771!GO:0006220;pyrimidine nucleotide metabolic process;0.0188919590104279!GO:0019320;hexose catabolic process;0.0189426985145599!GO:0004843;ubiquitin-specific protease activity;0.0194767477923455!GO:0000118;histone deacetylase complex;0.0199776534468325!GO:0030119;AP-type membrane coat adaptor complex;0.0201058708980517!GO:0007040;lysosome organization and biogenesis;0.0205916164158345!GO:0005521;lamin binding;0.0222652112322962!GO:0004221;ubiquitin thiolesterase activity;0.022341904293443!GO:0031968;organelle outer membrane;0.0223486343960179!GO:0009451;RNA modification;0.0225325437847996!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0225381967658294!GO:0008250;oligosaccharyl transferase complex;0.0227839631817494!GO:0000178;exosome (RNase complex);0.0229192504603282!GO:0032200;telomere organization and biogenesis;0.0229544570994658!GO:0000723;telomere maintenance;0.0229544570994658!GO:0044275;cellular carbohydrate catabolic process;0.0230352548696008!GO:0009081;branched chain family amino acid metabolic process;0.0231674581606077!GO:0030135;coated vesicle;0.0235142834601652!GO:0008276;protein methyltransferase activity;0.0235142834601652!GO:0043631;RNA polyadenylation;0.023732631939486!GO:0030027;lamellipodium;0.0237676301739239!GO:0019867;outer membrane;0.0242586965793266!GO:0030131;clathrin adaptor complex;0.0243858954196949!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0247031840436098!GO:0050178;phenylpyruvate tautomerase activity;0.0248222015391669!GO:0004177;aminopeptidase activity;0.0255324270923801!GO:0043414;biopolymer methylation;0.0257584839004609!GO:0016481;negative regulation of transcription;0.0262771794753465!GO:0006611;protein export from nucleus;0.0264256292286882!GO:0048487;beta-tubulin binding;0.0277468355014958!GO:0005905;coated pit;0.0280157569169728!GO:0005637;nuclear inner membrane;0.0290099378418403!GO:0007088;regulation of mitosis;0.0296119872803083!GO:0040029;regulation of gene expression, epigenetic;0.0299141242247418!GO:0005777;peroxisome;0.0299141242247418!GO:0042579;microbody;0.0299141242247418!GO:0006275;regulation of DNA replication;0.0300336351399768!GO:0006607;NLS-bearing substrate import into nucleus;0.0300601868113273!GO:0030384;phosphoinositide metabolic process;0.0300601868113273!GO:0010468;regulation of gene expression;0.0300601868113273!GO:0003923;GPI-anchor transamidase activity;0.0302364824807396!GO:0016255;attachment of GPI anchor to protein;0.0302364824807396!GO:0042765;GPI-anchor transamidase complex;0.0302364824807396!GO:0043601;nuclear replisome;0.0302364824807396!GO:0030894;replisome;0.0302364824807396!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0306014914166465!GO:0031628;opioid receptor binding;0.0310106755607643!GO:0031852;mu-type opioid receptor binding;0.0310106755607643!GO:0032984;macromolecular complex disassembly;0.0310355886960449!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0312602259536559!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0313439096827795!GO:0044438;microbody part;0.0313439096827795!GO:0044439;peroxisomal part;0.0313439096827795!GO:0009119;ribonucleoside metabolic process;0.0317295938763935!GO:0016790;thiolester hydrolase activity;0.0319589954659213!GO:0046112;nucleobase biosynthetic process;0.032717032809574!GO:0042769;DNA damage response, detection of DNA damage;0.0328445711912579!GO:0005741;mitochondrial outer membrane;0.0330304349204044!GO:0048519;negative regulation of biological process;0.0330848977166138!GO:0016866;intramolecular transferase activity;0.0333392435780688!GO:0016125;sterol metabolic process;0.0335737701979689!GO:0005663;DNA replication factor C complex;0.0335737701979689!GO:0017134;fibroblast growth factor binding;0.0336939109253175!GO:0007033;vacuole organization and biogenesis;0.0337643427726053!GO:0050789;regulation of biological process;0.0345707639540586!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0351435463440526!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0352881314981779!GO:0046966;thyroid hormone receptor binding;0.0354055924449131!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0354055924449131!GO:0055083;monovalent inorganic anion homeostasis;0.0354055924449131!GO:0055064;chloride ion homeostasis;0.0354055924449131!GO:0030644;cellular chloride ion homeostasis;0.0354055924449131!GO:0005784;translocon complex;0.035509198406054!GO:0008408;3'-5' exonuclease activity;0.035509198406054!GO:0006518;peptide metabolic process;0.0358685215839195!GO:0050681;androgen receptor binding;0.0359410260330015!GO:0004722;protein serine/threonine phosphatase activity;0.0365023990560044!GO:0018202;peptidyl-histidine modification;0.0370236337177737!GO:0043488;regulation of mRNA stability;0.0371291139835733!GO:0043487;regulation of RNA stability;0.0371291139835733!GO:0019238;cyclohydrolase activity;0.0374147617223603!GO:0000790;nuclear chromatin;0.0376574869641618!GO:0006406;mRNA export from nucleus;0.0376574869641618!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.037934285224101!GO:0030036;actin cytoskeleton organization and biogenesis;0.037934285224101!GO:0004448;isocitrate dehydrogenase activity;0.0380449652167775!GO:0031371;ubiquitin conjugating enzyme complex;0.0383299629206389!GO:0032039;integrator complex;0.0395385550877934!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0397744818515616!GO:0008601;protein phosphatase type 2A regulator activity;0.0398681423319366!GO:0006665;sphingolipid metabolic process;0.0403701834079053!GO:0035267;NuA4 histone acetyltransferase complex;0.0405112701402665!GO:0009308;amine metabolic process;0.0407081180187067!GO:0044450;microtubule organizing center part;0.0422955142294689!GO:0031903;microbody membrane;0.0438253878188293!GO:0005778;peroxisomal membrane;0.0438253878188293!GO:0032774;RNA biosynthetic process;0.0440161251068813!GO:0000062;acyl-CoA binding;0.0440161251068813!GO:0042026;protein refolding;0.0442515904523897!GO:0043624;cellular protein complex disassembly;0.044563293551455!GO:0003677;DNA binding;0.0451453658056566!GO:0009124;nucleoside monophosphate biosynthetic process;0.0451453658056566!GO:0009123;nucleoside monophosphate metabolic process;0.0451453658056566!GO:0005669;transcription factor TFIID complex;0.0454975117918146!GO:0030125;clathrin vesicle coat;0.0459695535843042!GO:0030665;clathrin coated vesicle membrane;0.0459695535843042!GO:0006740;NADPH regeneration;0.0459695535843042!GO:0006098;pentose-phosphate shunt;0.0459695535843042!GO:0004463;leukotriene-A4 hydrolase activity;0.0464424071755938!GO:0004301;epoxide hydrolase activity;0.0464424071755938!GO:0007004;telomere maintenance via telomerase;0.0465393186015335!GO:0008216;spermidine metabolic process;0.046904677652081!GO:0006892;post-Golgi vesicle-mediated transport;0.04762813008049!GO:0016417;S-acyltransferase activity;0.04762813008049!GO:0022884;macromolecule transmembrane transporter activity;0.0482819216529033!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0482819216529033!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0491060365561365!GO:0006351;transcription, DNA-dependent;0.0499791518370996 | |||
|sample_id=10589 | |||
|sample_note= | |||
|sample_sex=female | |||
|sample_species=Human (Homo sapiens) | |||
|sample_strain= | |||
|sample_tissue=cervix | |||
|top_motifs=VSX1,2:3.6507915571;HNF1A:3.1498475594;NANOG:3.12561698813;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:2.75106013707;POU6F1:2.38449675319;SNAI1..3:2.35943060792;YY1:2.35147076981;FOXA2:2.27013025185;NKX6-1,2:2.20973688567;bHLH_family:2.1684821406;ZEB1:2.16413114166;LHX3,4:2.08742180018;NRF1:2.00285672862;DBP:1.99998361048;HOX{A6,A7,B6,B7}:1.97302982241;RFX2..5_RFXANK_RFXAP:1.96046980567;PITX1..3:1.94342486026;MYOD1:1.91803463521;RFX1:1.88877834026;HNF4A_NR2F1,2:1.71347563244;LMO2:1.67328448416;ONECUT1,2:1.58445765137;NKX2-1,4:1.53247801283;FOXM1:1.52003199962;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.44593593011;ADNP_IRX_SIX_ZHX:1.38237745633;FOXP1:1.3635665031;FOX{D1,D2}:1.28250143012;RBPJ:1.26898436674;AIRE:1.23633011907;ARID5B:1.2173482481;E2F1..5:1.16299780872;TEF:1.05258734002;CDX1,2,4:1.02824735568;FOX{F1,F2,J1}:0.956301349771;NKX3-1:0.954751730619;REST:0.953699687586;ZBTB16:0.944010007105;NFY{A,B,C}:0.943688621799;ZNF143:0.926189635774;NKX2-3_NKX2-5:0.885387081031;GFI1:0.832564408457;ELK1,4_GABP{A,B1}:0.81522828784;FOXL1:0.797100543828;ZFP161:0.795061673971;SOX{8,9,10}:0.750819874526;PAX4:0.696089374067;PBX1:0.674819081257;TOPORS:0.674034147644;MYB:0.559919970767;POU1F1:0.530997751919;CUX2:0.498105439025;PAX5:0.47247391656;AHR_ARNT_ARNT2:0.428693851096;GATA6:0.383237366351;HAND1,2:0.363494126772;PAX3,7:0.333568703665;HIC1:0.324761001303;CDC5L:0.256756317659;IKZF2:0.256481899415;RREB1:0.255607793324;MTE{core}:0.251578308206;BREu{core}:0.24506342441;FOXQ1:0.2346196994;PAX6:0.222763904326;STAT5{A,B}:0.214454500849;FOXD3:0.213282870294;HIF1A:0.152698533291;MED-1{core}:0.151237486538;XCPE1{core}:0.141717855544;SP1:0.138162010922;HMGA1,2:0.112489568083;TFAP2B:0.0777992501212;PRRX1,2:0.0711636900206;NHLH1,2:0.0460812310327;KLF4:0.0389773572323;EVI1:0.0305374335792;PAX2:0.0236166919577;NR1H4:0.0220958251639;POU5F1:0.0127981022871;JUN:0.00573110345848;PAX8:-0.00442478466544;FOX{I1,J2}:-0.00752434445541;PPARG:-0.0135588645663;ATF5_CREB3:-0.0162087191191;NANOG{mouse}:-0.016474974273;ESR1:-0.0174511757676;TBP:-0.0242640239623;ZBTB6:-0.0301561990449;TAL1_TCF{3,4,12}:-0.0404586074943;TGIF1:-0.0502859654578;TFDP1:-0.0621635387892;SOX5:-0.0934909685956;NR6A1:-0.0973456204163;ATF6:-0.107817563754;POU2F1..3:-0.133844273065;ZNF423:-0.150460693786;MTF1:-0.165819062237;FOXN1:-0.184320799916;NR3C1:-0.185191334874;PDX1:-0.195561711787;PATZ1:-0.199475568457;OCT4_SOX2{dimer}:-0.249863462492;HOX{A4,D4}:-0.256566449931;SREBF1,2:-0.260913058951;RXR{A,B,G}:-0.308058083565;ZNF384:-0.311550328618;BPTF:-0.313655429378;ATF2:-0.321298400379;MZF1:-0.325332764077;ATF4:-0.336923676853;MEF2{A,B,C,D}:-0.34157236227;ESRRA:-0.342026339197;HES1:-0.352873449716;CRX:-0.362929725293;GFI1B:-0.370145780155;FOXP3:-0.388416456966;EBF1:-0.395677076287;SOX17:-0.437737451071;NFE2L1:-0.468072586195;ALX1:-0.482280997176;AR:-0.48716369273;NR5A1,2:-0.488048661762;UFEwm:-0.5101632246;NKX2-2,8:-0.53514220858;HBP1_HMGB_SSRP1_UBTF:-0.551546780638;ELF1,2,4:-0.553077980208;MYFfamily:-0.58009259543;EN1,2:-0.581541005721;HLF:-0.617361521342;EGR1..3:-0.631348948028;PRDM1:-0.63263529839;SPIB:-0.635150753205;HOX{A5,B5}:-0.635849773321;CREB1:-0.669865523097;FOSL2:-0.689369169092;FOS_FOS{B,L1}_JUN{B,D}:-0.692448146845;HSF1,2:-0.69361342099;GZF1:-0.709751995916;GTF2I:-0.710683704662;BACH2:-0.710731122868;IKZF1:-0.733515205929;NFKB1_REL_RELA:-0.741060682864;MAZ:-0.74251714772;NFE2:-0.758284837357;TLX2:-0.772589735793;ZIC1..3:-0.777458687355;RUNX1..3:-0.799035380619;FOXO1,3,4:-0.807287128327;TP53:-0.821373252862;TFAP2{A,C}:-0.822705139778;GATA4:-0.827052559352;EP300:-0.836420696909;LEF1_TCF7_TCF7L1,2:-0.848912072238;SPI1:-0.88682737183;IRF7:-0.905255677082;RORA:-0.906524761771;T:-0.919446912603;TBX4,5:-0.926417828147;TFCP2:-0.948865368707;TLX1..3_NFIC{dimer}:-0.953906724176;GLI1..3:-0.95429548788;SOX2:-0.965552088373;XBP1:-0.975157915048;NFIX:-1.00767614957;ETS1,2:-1.03402819027;IRF1,2:-1.03543640495;POU3F1..4:-1.04909948896;PAX1,9:-1.05116119452;ZNF148:-1.07633551981;GTF2A1,2:-1.09568606597;HOXA9_MEIS1:-1.11417415372;NKX3-2:-1.16064303117;DMAP1_NCOR{1,2}_SMARC:-1.16304042871;STAT1,3:-1.17780569201;MYBL2:-1.19145590247;SMAD1..7,9:-1.22352126812;ALX4:-1.2256591222;NFE2L2:-1.24928352655;STAT2,4,6:-1.2965853645;MAFB:-1.33197402571;CEBPA,B_DDIT3:-1.35034418487;SRF:-1.36853323411;GCM1,2:-1.3720119923;SPZ1:-1.38663333265;HMX1:-1.40349225878;TEAD1:-1.43925883843;NFIL3:-1.47975592391;RXRA_VDR{dimer}:-1.48665734874;TFAP4:-1.52320267986;ZNF238:-1.74848635338;NFATC1..3:-2.20567967264 | |||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10589-108D4;search_select_hide=table117:FF:10589-108D4 | |||
}} | }} |
Latest revision as of 14:30, 3 June 2020
Name: | argyrophil small cell carcinoma cell line:TC-YIK |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11725 |
Sample type: | cell lines |
Genomic View: | UCSC |
RefEX: | Specific genes |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11725
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11725
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.806 |
10 | 10 | 0.466 |
100 | 100 | 0.354 |
101 | 101 | 0.978 |
102 | 102 | 0.628 |
103 | 103 | 0.158 |
104 | 104 | 0.375 |
105 | 105 | 0.58 |
106 | 106 | 2.74761e-5 |
107 | 107 | 0.0104 |
108 | 108 | 0.997 |
109 | 109 | 0.536 |
11 | 11 | 0.37 |
110 | 110 | 0.434 |
111 | 111 | 0.509 |
112 | 112 | 0.419 |
113 | 113 | 0.832 |
114 | 114 | 0.128 |
115 | 115 | 0.814 |
116 | 116 | 0.448 |
117 | 117 | 0.724 |
118 | 118 | 0.73 |
119 | 119 | 0.24 |
12 | 12 | 0.967 |
120 | 120 | 0.816 |
121 | 121 | 0.656 |
122 | 122 | 0.0818 |
123 | 123 | 0.385 |
124 | 124 | 0.495 |
125 | 125 | 0.92 |
126 | 126 | 0.97 |
127 | 127 | 0.112 |
128 | 128 | 0.0177 |
129 | 129 | 0.395 |
13 | 13 | 0.356 |
130 | 130 | 0.385 |
131 | 131 | 0.573 |
132 | 132 | 0.325 |
133 | 133 | 0.358 |
134 | 134 | 0.612 |
135 | 135 | 0.0858 |
136 | 136 | 0.489 |
137 | 137 | 0.355 |
138 | 138 | 0.982 |
139 | 139 | 0.487 |
14 | 14 | 0.615 |
140 | 140 | 0.985 |
141 | 141 | 0.552 |
142 | 142 | 0.579 |
143 | 143 | 5.59403e-4 |
144 | 144 | 0.103 |
145 | 145 | 0.239 |
146 | 146 | 0.595 |
147 | 147 | 0.419 |
148 | 148 | 0.337 |
149 | 149 | 0.114 |
15 | 15 | 0.431 |
150 | 150 | 0.242 |
151 | 151 | 0.25 |
152 | 152 | 0.0111 |
153 | 153 | 0.629 |
154 | 154 | 0.564 |
155 | 155 | 0.325 |
156 | 156 | 0.958 |
157 | 157 | 0.589 |
158 | 158 | 0.996 |
159 | 159 | 0.268 |
16 | 16 | 0.51 |
160 | 160 | 0.815 |
161 | 161 | 0.923 |
162 | 162 | 0.596 |
163 | 163 | 0.124 |
164 | 164 | 0.577 |
165 | 165 | 0.256 |
166 | 166 | 0.394 |
167 | 167 | 0.454 |
168 | 168 | 0.193 |
169 | 169 | 0.026 |
17 | 17 | 0.397 |
18 | 18 | 0.014 |
19 | 19 | 0.169 |
2 | 2 | 0.502 |
20 | 20 | 0.427 |
21 | 21 | 0.478 |
22 | 22 | 0.0612 |
23 | 23 | 0.00241 |
24 | 24 | 0.136 |
25 | 25 | 0.669 |
26 | 26 | 0.683 |
27 | 27 | 0.498 |
28 | 28 | 0.964 |
29 | 29 | 0.615 |
3 | 3 | 0.429 |
30 | 30 | 0.256 |
31 | 31 | 0.589 |
32 | 32 | 0.0116 |
33 | 33 | 0.796 |
34 | 34 | 0.262 |
35 | 35 | 0.587 |
36 | 36 | 0.45 |
37 | 37 | 0.171 |
38 | 38 | 0.358 |
39 | 39 | 0.202 |
4 | 4 | 0.816 |
40 | 40 | 0.907 |
41 | 41 | 0.0543 |
42 | 42 | 0.515 |
43 | 43 | 0.118 |
44 | 44 | 0.395 |
45 | 45 | 0.216 |
46 | 46 | 0.233 |
47 | 47 | 0.727 |
48 | 48 | 0.842 |
49 | 49 | 0.292 |
5 | 5 | 0.248 |
50 | 50 | 0.543 |
51 | 51 | 0.366 |
52 | 52 | 0.102 |
53 | 53 | 0.768 |
54 | 54 | 0.304 |
55 | 55 | 0.0845 |
56 | 56 | 0.889 |
57 | 57 | 0.962 |
58 | 58 | 0.693 |
59 | 59 | 0.0548 |
6 | 6 | 0.693 |
60 | 60 | 0.0145 |
61 | 61 | 0.989 |
62 | 62 | 0.345 |
63 | 63 | 0.151 |
64 | 64 | 0.761 |
65 | 65 | 0.0797 |
66 | 66 | 0.811 |
67 | 67 | 0.403 |
68 | 68 | 0.79 |
69 | 69 | 0.909 |
7 | 7 | 0.679 |
70 | 70 | 0.0854 |
71 | 71 | 0.267 |
72 | 72 | 0.153 |
73 | 73 | 0.0745 |
74 | 74 | 0.169 |
75 | 75 | 0.716 |
76 | 76 | 0.734 |
77 | 77 | 0.311 |
78 | 78 | 0.486 |
79 | 79 | 0.2 |
8 | 8 | 0.781 |
80 | 80 | 0.218 |
81 | 81 | 0.189 |
82 | 82 | 0.684 |
83 | 83 | 0.0512 |
84 | 84 | 0.96 |
85 | 85 | 0.0137 |
86 | 86 | 0.319 |
87 | 87 | 0.691 |
88 | 88 | 0.474 |
89 | 89 | 0.192 |
9 | 9 | 0.0581 |
90 | 90 | 0.167 |
91 | 91 | 0.156 |
92 | 92 | 0.316 |
93 | 93 | 0.469 |
94 | 94 | 0.0685 |
95 | 95 | 0.614 |
96 | 96 | 0.354 |
97 | 97 | 0.874 |
98 | 98 | 0.524 |
99 | 99 | 0.877 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11725
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
CL:0002535 epithelial cell of cervix
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100297 carcinoma cell line sample
FF:0101967 cervical cancer cell line sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0002535 (epithelial cell of cervix)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
193 (reproductive organ cancer)
305 (carcinoma)
120 (female reproductive organ cancer)
4362 (cervical cancer)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000002 (uterine cervix)
0000995 (uterus)
0000483 (epithelium)
0003134 (female reproductive organ)
0000479 (tissue)
0001560 (neck of organ)
0005156 (reproductive structure)
0000064 (organ part)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003133 (reproductive organ)
0003975 (internal female genitalia)
0004175 (internal genitalia)
0010317 (germ layer / neural crest derived structure)
0006955 (uterine epithelium)
0004801 (cervix epithelium)
0003100 (female organism)
0000474 (female reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0101967 (cervical cancer cell line sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)