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{{f5samples
{{f5samples
|id=FF:11329-117E6
|DRA_sample_Accession=CAGE@SAMD00005229
|name=Preadipocyte - omental, donor2
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005229
|sample_id=11329
|accession_numbers=CAGE;DRX008410;DRR009282;DRZ000707;DRZ002092;DRZ012057;DRZ013442
|rna_tube_id=117E6
|accession_numbers_RNASeq=sRNA-Seq;DRX037127;DRR041493;DRZ007135
|rna_box=117
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0003688,UBERON:0002100,UBERON:0002384,UBERON:0000479,UBERON:0000064,UBERON:0000466,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0004457,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0004923,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002323,UBERON:0000042,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002417,UBERON:0002358,UBERON:0000916,UBERON:0003684,UBERON:0001178
|rna_position=E6
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002334,CL:0002579
|sample_cell_lot=lot:OMM040705
|sample_cell_catalog=F-OP-F
|sample_company=Zenbio
|rna_lot_number=
|rna_catalog_number=N/A
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=24 years old adult
|sample_tissue=omentum
|sample_donor(cell lot)=
|sample_sex=female
|sample_age=24
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=1.77
|rna_od260/280=2.03
|sample_cell_type=preadipocyte
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=9.5
|rna_concentration=0.381
|sample_note=
|profile_hcage=CNhs11902,LSID834,release010,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10008,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000057,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002334,CL:0002371,CL:0002579
|ancestors_in_anatomy_facet=UBERON:0000042,UBERON:0000061,UBERON:0000062,UBERON:0000063,UBERON:0000064,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000916,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001178,UBERON:0002050,UBERON:0002100,UBERON:0002323,UBERON:0002358,UBERON:0002384,UBERON:0002417,UBERON:0002532,UBERON:0002553,UBERON:0003684,UBERON:0003688,UBERON:0004120,UBERON:0004457,UBERON:0004458,UBERON:0004923,UBERON:0005423
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000137,FF:0000140
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!2.13!133.56!HOXC5;;chr2:119605214..119605230,-!p1@EN1!1.99!96.20!EN1;;chr6:134210243..134210257,+!p1@TCF21!1.77!57.31!TCF21;;chr1:170632285..170632309,+!p1@PRRX1!1.76!63.96!PRRX1;;chr12:54402745..54402788,+!p1@HOXC8!1.72!51.68!HOXC8;;chr3:141719209..141719215,-!p10@TFDP2!1.62!40.94!TFDP2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.56!35.31!ZBED1;;chr9:132427883..132427951,+!p2@PRRX2!1.55!34.80!PRRX2;;chr9:132427972..132428056,+!p1@PRRX2!1.50!39.91!PRRX2;;chr4:111558135..111558198,-!p2@PITX2!1.46!27.63!PITX2;;chr4:174450089..174450153,-!p2@HAND2!1.41!24.56!HAND2;;chr18:53068911..53068935,-!p4@TCF4!1.35!24.05!TCF4;;chr17:46682321..46682362,-!p1@HOXB6!1.34!20.98!HOXB6;;chr2:239756739..239756755,+!p2@TWIST2!1.33!34.28!TWIST2;;chr19:47523058..47523114,+!p1@NPAS1!1.33!20.47!NPAS1;;chr2:239756671..239756732,+!p1@TWIST2!1.32!63.45!TWIST2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.30!18.93!HOXC5;;chr1:170633348..170633399,+!p2@PRRX1!1.29!25.07!PRRX1;;chr4:4861385..4861398,+!p1@MSX1!1.28!52.71!MSX1;;chr6:19837592..19837621,+!p1@ID4!1.27!105.41!ID4;;chr12:54393880..54393962,+!p1@HOXC9!1.26!17.40!HOXC9;;chr4:174451370..174451387,-!p1@HAND2!1.25!16.89!HAND2;;chr12:80085061..80085119,-!p6@PAWR!1.24!26.10!PAWR;;chr10:28034739..28034756,-!p1@MKX!1.24!16.37!MKX;;chr11:46299199..46299233,+!p1@CREB3L1!1.21!77.78!CREB3L1;;chr7:19157248..19157268,-!p1@TWIST1!1.19!39.91!TWIST1;;chr15:57511609..57511651,+!p2@TCF12!1.18!23.54!TCF12;;chr10:119302232..119302265,+!p1@EMX2!1.17!13.82!EMX2;;chr11:46299539..46299620,+!p2@CREB3L1!1.14!21.49!CREB3L1;;chr19:13134772..13134822,+!p2@NFIX!1.14!18.93!NFIX;;chr1:170632477..170632506,+!p6@PRRX1!1.14!12.79!PRRX1;;chr9:96717629..96717644,-!p1@BARX1!1.11!11.77!BARX1;;chr1:23885981..23886002,-!p1@ID3!1.09!1981.33!ID3;;chr14:62162258..62162269,+!p2@HIF1A!1.08!105.92!HIF1A;;chr1:170633262..170633285,+!p3@PRRX1!1.08!12.79!PRRX1;;chr14:62162285..62162296,+!p3@HIF1A!1.07!56.80!HIF1A;;chr2:19558373..19558392,-!p1@OSR1!1.04!27.63!OSR1;;chr16:86544113..86544145,+!p1@FOXF1!1.04!12.28!FOXF1;;chr1:170632959..170632987,+!p4@PRRX1!1.03!10.75!PRRX1;;chr12:54402729..54402743,+!p3@HOXC8!1.03!9.72!HOXC8;;chr6:144329384..144329405,-!p1@PLAGL1!1.02!110.53!PLAGL1;;chr10:63809013..63809041,+!p3@ARID5B!1.02!54.24!ARID5B;;chr19:50432453..50432468,+!p1@ATF5!1.01!526.04!ATF5;;chr5:72744594..72744609,-!p1@FOXD1!1.01!42.98!FOXD1;;chr1:170633058..170633084,+!p5@PRRX1!1.01!9.21!PRRX1;;chr10:114889045..114889074,+!p12@TCF7L2!1.01!9.21!TCF7L2;;chr18:19749386..19749404,+!p2@GATA6!0.99!12.79!GATA6;;chr2:85981107..85981120,+!p3@ATOH8!0.99!8.70!ATOH8;;chr1:170632723..170632739,+!p8@PRRX1!0.99!8.70!PRRX1;;chr8:106330656..106330684,+!p1@ZFPM2!0.98!23.03!ZFPM2;;chr17:46688334..46688385,-!p1@HOXB7!0.96!11.77!HOXB7;;chr2:119605233..119605245,-!p8@EN1!0.96!8.19!EN1;;chr18:19749541..19749557,+!p1@GATA6!0.95!25.59!GATA6;;chr15:42749722..42749739,-!p2@ZFP106!0.95!14.33!ZFP106;;chr2:85980951..85981004,+!p1@ATOH8!0.95!13.30!ATOH8;;chr10:119303078..119303169,+!p2@EMX2!0.94!7.68!EMX2;;chr5:72744445..72744466,-!p2@FOXD1!0.93!12.79!FOXD1;;chr7:44143978..44143989,+!p2@AEBP1!0.92!13.82!AEBP1;;chr12:26277817..26277863,-!p2@BHLHE41!0.91!9.72!BHLHE41;;chr12:54402790..54402805,+!p2@HOXC8!0.91!7.16!HOXC8;;chr13:37494275..37494304,-!p2@SMAD9!0.91!7.16!SMAD9;;chr2:119604456..119604501,-!p2@EN1!0.91!7.16!EN1;;chr2:85981073..85981091,+!p5@ATOH8!0.91!7.16!ATOH8;;chr1:170632250..170632277,+!p7@PRRX1!0.91!7.16!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!0.91!7.16!PRRX1;;chr8:49833948..49833973,-!p2@SNAI2!0.90!46.57!SNAI2;;chr12:26277956..26277980,-!p1@BHLHE41!0.90!26.10!BHLHE41;;chr7:44143925..44143970,+!p1@AEBP1!0.89!157.09!AEBP1;;chrX:106960180..106960197,-!p2@TSC22D3!0.88!26.61!TSC22D3;;chr10:28035112..28035130,-!p5@MKX!0.88!6.65!MKX;;chr12:80085120..80085156,-!p14@PAWR!0.88!6.65!PAWR;;chr4:111544219..111544240,-!p1@PITX2!0.88!6.65!PITX2;;chr4:111558118..111558133,-!p5@PITX2!0.88!6.65!PITX2;;chr3:141121847..141121868,+!p5@ZBTB38!0.86!9.72!ZBTB38;;chr20:51588873..51588953,+!p1@TSHZ2!0.85!8.19!TSHZ2;;chr5:2751762..2751784,-!p1@IRX2!0.85!6.14!IRX2;;chr14:95236551..95236576,-!p2@GSC!0.85!6.14!GSC;;chr2:208031943..208031978,-!p5@KLF7!0.84!8.19!KLF7;;chr10:77161504..77161530,-!p1@ZNF503!0.83!82.90!ZNF503;;chr8:49833978..49833996,-!p1@SNAI2!0.82!124.86!SNAI2;;chr11:12696071..12696086,+!p3@TEAD1!0.82!7.68!TEAD1;;chr7:1577899..1577943,+!p3@MAFK!0.82!5.63!MAFK;;chr1:170632137..170632172,+!p10@PRRX1!0.82!5.63!PRRX1;;chr5:158526917..158526932,-!p1@EBF1!0.81!14.33!EBF1;;chr19:47922750..47922795,-!p1@MEIS3!0.81!9.21!MEIS3;;chr17:46687959..46688007,-!p2@HOXB7!0.81!7.68!HOXB7;;chr17:1959369..1959388,+!p2@HIC1!0.80!14.84!HIC1;;chr7:27205136..27205164,-!p1@HOXA9!0.79!5.12!HOXA9;;chr8:106330543..106330554,+!p4@ZFPM2!0.79!5.12!ZFPM2;;chr10:131762504..131762555,-!p1@EBF3!0.79!5.12!EBF3;;chr12:114843940..114843955,-!p2@TBX5!0.79!5.12!TBX5;;chr10:63809106..63809127,+!p1@ARID5B!0.78!75.22!ARID5B;;chr13:37494365..37494381,-!p1@SMAD9!0.78!9.21!SMAD9;;chr12:80084137..80084165,-!p10@PAWR!0.78!6.65!PAWR;;chr5:92918919..92918942,+!p1@NR2F1!0.77!24.05!NR2F1;;chr3:170076314..170076334,+!p2@SKIL!0.77!6.65!SKIL;;chr2:121493425..121493474,+!p1@GLI2!0.76!11.26!GLI2;;chr2:85980919..85980942,+!p4@ATOH8!0.76!5.12!ATOH8;;chr13:45151259..45151326,-!p2@TSC22D1!0.75!30.70!TSC22D1;;chr10:28035133..28035148,-!p3@MKX!0.75!4.61!MKX;;chr12:54394309..54394336,+!p2@HOXC9!0.75!4.61!HOXC9;;chr13:45150455..45150472,-!p8@TSC22D1!0.75!4.61!TSC22D1;;chr7:150945865..150945896,-!p4@SMARCD3!0.75!4.61!SMARCD3;;chr1:170632115..170632136,+!p9@PRRX1!0.75!4.61!PRRX1;;chr1:170632439..170632465,+!p11@PRRX1!0.75!4.61!PRRX1;;chr2:119605374..119605377,-!p7@EN1!0.75!4.61!EN1;;chr14:95236440..95236465,-!p1@GSC!0.75!4.61!GSC;;chr6:144289132..144289134,-!p3@PLAGL1!0.74!11.26!PLAGL1;;chr2:8822176..8822196,+!p1@ID2!0.73!698.48!ID2;;chr17:46621937..46621966,-!p2@HOXB2!0.73!12.79!HOXB2;;chr12:48298765..48298783,-!p2@VDR!0.73!9.72!VDR;;chr8:72756667..72756736,-!p2@MSC!0.73!7.16!MSC;;chr17:38498594..38498661,+!p2@RARA!0.72!15.86!RARA;;chr16:31076332..31076388,-!p3@ZNF668!0.71!4.09!ZNF668;;chr17:46690839..46690884,-!p1@HOXB8!0.71!4.09!HOXB8;;chr18:53068893..53068902,-!p28@TCF4!0.71!4.09!TCF4;;chr5:139492456..139492489,+!p7@PURA!0.71!4.09!PURA;;chr8:23564065..23564087,-!p1@NKX2-6!0.71!4.09!NKX2-6;;chr8:93074803..93074845,-!p1@RUNX1T1!0.71!4.09!RUNX1T1;;chr2:175199697..175199706,+!p2@SP9!0.71!4.09!SP9;;chr2:176994408..176994492,+!p1@HOXD8!0.71!4.09!HOXD8;;chr2:178129853..178129860,-!p14@NFE2L2!0.71!4.09!NFE2L2;;chr3:25470156..25470227,+!p2@RARB!0.71!4.09!RARB;;chr10:28032421..28032494,-!p2@MKX!0.71!4.09!MKX;;chr12:54410948..54410992,+!p3@HOXC5!0.71!4.09!HOXC5;;chr1:170633100..170633112,+!p19@PRRX1!0.71!4.09!PRRX1;;chr8:72756267..72756296,-!p4@MSC!0.70!6.14!MSC;;chr6:1389789..1389821,+!p1@FOXF2!0.69!5.63!FOXF2;;chr7:44143997..44144008,+!p3@AEBP1!0.69!5.12!AEBP1;;chr8:106330696..106330719,+!p2@ZFPM2!0.69!5.12!ZFPM2;;chr14:62162224..62162254,+!p1@HIF1A!0.68!634.52!HIF1A;;chr2:46524537..46524553,+!p1@EPAS1!0.68!432.90!EPAS1;;chrX:106960221..106960236,-!p3@TSC22D3!0.68!11.77!TSC22D3;;chr2:85981222..85981259,+!p2@ATOH8!0.68!6.65!ATOH8;;chr12:80084279..80084293,-!p8@PAWR!0.68!6.65!PAWR;;chr5:72743793..72743855,-!p4@FOXD1!0.68!4.61!FOXD1;;chr10:63809077..63809089,+!p5@ARID5B!0.67!8.70!ARID5B;;chr19:13134457..13134462,+!p5@NFIX!0.67!7.16!NFIX;;chr16:54964740..54964789,+!p1@IRX5!0.67!5.63!IRX5;;chr17:46687935..46687950,-!p3@HOXB7!0.66!3.58!HOXB7;;chr19:13135582..13135600,+!p3@NFIX!0.66!3.58!NFIX;;chr10:114889016..114889037,+!p15@TCF7L2!0.66!3.58!TCF7L2;;chr12:54380036..54380091,+!p4@HOXC10!0.66!3.58!HOXC10;;chr12:54380404..54380433,+!p3@HOXC10!0.66!3.58!HOXC10;;chr12:54422217..54422239,+!p3@HOXC6!0.66!3.58!HOXC6;;chr1:170632762..170632786,+!p13@PRRX1!0.66!3.58!PRRX1;;chr1:170632867..170632878,+!p21@PRRX1!0.66!3.58!PRRX1;;chr7:27183291..27183324,-!p1@HOXA5!0.66!3.58!HOXA5;;chr2:85980868..85980880,+!p12@ATOH8!0.66!3.58!ATOH8;;chr2:85981271..85981289,+!p9@ATOH8!0.66!3.58!ATOH8;;chr8:77593474..77593612,+!p1@ZFHX4!0.65!16.89!ZFHX4;;chr3:24536253..24536328,-!p1@THRB!0.65!7.16!THRB;;chr8:72756637..72756664,-!p3@MSC!0.65!4.09!MSC;;chr10:63809134..63809145,+!p6@ARID5B!0.64!8.70!ARID5B;;chr14:75894714..75894733,+!p1@JDP2!0.63!108.99!JDP2;;chr5:321810..321877,+!p1@AHRR!0.63!11.77!AHRR;;chr19:13136241..13136258,+!p7@NFIX!0.63!4.61!NFIX;;chr6:85473156..85473210,-!p2@TBX18!0.63!4.09!TBX18;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.62!37.87!GLIS2;;chr19:45908292..45908374,-!p1@PPP1R13L!0.62!33.26!PPP1R13L;;chr12:80084303..80084332,-!p1@PAWR!0.62!22.00!PAWR;;chr7:77428227..77428242,+!p3@PHTF2!0.62!5.12!PHTF2;;chr5:72744562..72744573,-!p3@FOXD1!0.62!4.09!FOXD1;;chr2:208030647..208030689,-!p1@KLF7!0.61!30.70!KLF7;;chr16:86600426..86600441,+!p1@FOXC2!0.61!8.70!FOXC2;;chr17:15689487..15689505,+!p@chr17:15689487..15689505,+!0.61!5.63!MEIS3P1;;chr14:62203749..62203798,+!p5@HIF1A!0.61!5.12!HIF1A;;chr10:28035155..28035166,-!p8@MKX!0.61!3.07!MKX;;chr11:12696102..12696113,+!p5@TEAD1!0.61!3.07!TEAD1;;chr12:53625846..53625861,-!p6@RARG!0.61!3.07!RARG;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.61!3.07!SEBOX;;chr17:46667594..46667619,-!p1@HOXB3!0.61!3.07!HOXB3;;chr18:42260861..42260882,+!p5@SETBP1!0.61!3.07!SETBP1;;chr1:119530493..119530572,-!p1@TBX15!0.61!3.07!TBX15;;chr1:170632647..170632659,+!p17@PRRX1!0.61!3.07!PRRX1;;chr1:170633021..170633028,+!p27@PRRX1!0.61!3.07!PRRX1;;chr9:96717678..96717689,-!p2@BARX1!0.61!3.07!BARX1;;chr2:119605253..119605264,-!p5@EN1!0.61!3.07!EN1;;chr2:177001290..177001315,+!p1@HOXD3!0.61!3.07!HOXD3;;chr5:142780237..142780261,-!p7@NR3C1!0.61!3.07!NR3C1;;chr5:158526756..158526797,-!p3@EBF1!0.61!3.07!EBF1;;chr5:3595934..3595957,+!p2@IRX1!0.61!3.07!IRX1;;chr7:27196267..27196311,-!p1@HOXA7!0.61!3.07!HOXA7;;chr20:30193083..30193098,+!p1@ID1!0.60!293.72!ID1;;chr3:178789522..178789564,-!p2@ZMAT3!0.60!26.10!ZMAT3;;chr7:150945754..150945789,-!p2@SMA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chr19:16435625..16435682,+!p1@KLF2!0.23!49.64!KLF2;;chr3:141121164..141121249,+!p1@ZBTB38!0.23!25.59!ZBTB38;;chr2:70314849..70314860,+!p3@PCBP1!0.23!22.00!PCBP1;;chr19:9649304..9649326,-!p2@ZNF426!0.23!5.12!ZNF426;;chr9:73028332..73028385,-!p3@KLF9!0.23!4.61!KLF9;;chr10:51565156..51565167,+!p5@NCOA4!0.23!4.09!NCOA4;;chr1:164528384..164528409,+!p3@PBX1!0.23!4.09!PBX1;;chr17:46655730..46655791,-!p1@HOXB4!0.23!3.07!HOXB4;;chr3:40566371..40566400,+!p2@ZNF621!0.23!2.56!ZNF621;;chr19:2841497..2841523,+!p2@ZNF555!0.23!2.05!ZNF555;;chr1:61548374..61548415,+!p4@NFIA!0.23!2.05!NFIA;;chr11:130184672..130184696,-!p3@ZBTB44!0.23!2.05!ZBTB44;;chr16:54320646..54320672,-!p2@IRX3!0.23!1.54!IRX3;;chr15:37392593..37392607,-!p13@MEIS2!0.23!1.02!MEIS2;;chr19:36980474..36980485,-!p4@ZNF566!0.23!1.02!ZNF566;;chr3:141121369..141121392,+!p14@ZBTB38!0.23!1.02!ZBTB38;;chr12:26278008..26278024,-!p4@BHLHE41!0.23!1.02!BHLHE41;;chr19:58341656..58341694,+!p5@ZNF587!0.23!1.02!ZNF587;;chr3:52008016..52008071,-!p1@ABHD14A-ACY1,p1@ABHD14B,p1@PCBP4!0.22!87.50!PCBP4;;chr1:8938709..8938720,-!p3@ENO1!0.22!73.17!ENO1;;chr1:202777535..202777556,-!p1@KDM5B!0.22!50.15!KDM5B;;chr4:87856129..87856186,+!p1@AFF1!0.22!19.96!AFF1;;chr6:126112074..126112144,+!p1@NCOA7!0.22!19.44!NCOA7;;chr15:31619326..31619390,+!p2@KLF13!0.22!16.89!KLF13;;chr20:61493117..61493187,-!p1@TCFL5!0.22!16.37!TCFL5;;chr1:158979792..158979814,+!p2@IFI16!0.22!13.82!IFI16;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.22!6.14!TAL1;;chr19:6280025..6280040,-!p2@MLLT1!0.22!4.61!MLLT1;;chr19:37960240..37960299,+!p1@ZNF570!0.22!4.61!ZNF570;;chr6:7108855..7108903,+!p5@RREB1!0.22!2.56!RREB1;;chr19:22235279..22235301,+!p1@ZNF257!0.22!2.05!ZNF257;;chr19:57702832..57702844,+!p2@ZNF264!0.22!2.05!ZNF264;;chr19:57078854..57078889,+!p1@ZNF470!0.22!1.54!ZNF470;;chr1:8483723..8483752,-!p12@RERE!0.22!1.54!RERE;;chr6:45390300..45390335,+!p4@RUNX2!0.22!1.54!RUNX2;;chr8:73921067..73921078,+!p3@TERF1!0.22!1.54!TERF1;;chr7:14029312..14029325,-!p4@ETV1!0.22!1.02!ETV1;;chr1:43148716..43148756,+!p6@YBX1!0.22!1.02!YBX1;;chr3:114343195..114343206,-!p11@ZBTB20!0.22!1.02!ZBTB20;;chr3:150126200..150126211,+!p11@TSC22D2!0.22!1.02!TSC22D2;;chr9:16870659..16870675,-!p2@BNC2!0.22!1.02!BNC2;;chrX:129244499..129244506,-!p7@ELF4!0.22!1.02!ELF4;;chr15:37392094..37392116,-!p6@MEIS2!0.22!1.02!MEIS2;;chr17:40719165..40719168,+!p4@MLX!0.22!1.02!MLX;;chr12:54447599..54447630,+!p3@HOXC4!0.22!1.02!HOXC4;;chr5:132299290..132299310,-!p2@AFF4!0.21!28.14!AFF4;;chr1:246729483..246729538,-!p2@TFB2M!0.21!13.30!TFB2M;;chr6:134274295..134274308,+!p2@TBPL1!0.21!4.09!TBPL1;;chr19:21106081..21106115,+!p2@ZNF85!0.21!3.58!ZNF85;;chr1:41174988..41175047,+!p4@NFYC!0.21!3.07!NFYC;;chr4:87928328..87928351,+!p6@AFF1!0.21!3.07!AFF1;;chr12:53625966..53626012,-!p2@RARG!0.21!3.07!RARG;;chr8:71315615..71315638,-!p3@NCOA2!0.21!3.07!NCOA2;;chr4:57774018..57774040,+!p3@REST!0.21!2.56!REST;;chr8:116681150..116681164,-!p5@TRPS1!0.21!2.05!TRPS1;;chr19:9420483..9420530,-!p@chr19:9420483..9420530,-!0.21!2.05!ZNF699;;chr12:12764947..12764986,+!p2@CREBL2!0.21!2.05!CREBL2;;chr12:51611815..51611855,-!p1@POU6F1!0.21!1.54!POU6F1;;chr6:21594845..21594908,+!p6@SOX4!0.21!1.54!SOX4;;chr16:3185051..3185068,+!p3@ZNF213!0.21!1.54!ZNF213;;chr18:74072572..74072588,-!p2@ZNF516!0.21!1.54!ZNF516;;chr1:151043070..151043110,+!p3@GABPB2!0.21!1.54!GABPB2;;chr1:151032739..151032748,+!p6@MLLT11!0.21!1.02!MLLT11;;chr5:139494672..139494695,+!p8@PURA!0.21!1.02!PURA;;chr6:36355513..36355578,-!p2@ETV7!0.21!1.02!ETV7;;chr11:62369806..62369837,-!p8@MTA2!0.21!1.02!MTA2;;chr12:80083544..80083558,-!p13@PAWR!0.21!1.02!PAWR;;chr13:46543346..46543367,-!p9@ZC3H13!0.21!1.02!ZC3H13;;chr13:46626824..46626835,-!p8@ZC3H13!0.21!1.02!ZC3H13;;chr1:150849047..150849082,-!p1@ARNT!0.20!21.49!ARNT;;chr12:104531945..104531996,-!p1@NFYB!0.20!19.44!NFYB;;chr5:142783175..142783297,-!p1@NR3C1!0.20!19.44!NR3C1;;chr9:35732592..35732640,+!p1@CREB3!0.20!18.42!CREB3;;chr9:2015335..2015370,+!p1@SMARCA2!0.20!16.89!SMARCA2;;chr14:90085458..90085557,-!p1@FOXN3!0.20!14.33!FOXN3;;chr16:68573182..68573228,+!p1@ZFP90!0.20!13.30!ZFP90;;chr19:44100728..44100804,+!p1@SRRM5,p1@ZNF576!0.20!13.30!ZNF576;;chr2:238536207..238536290,+!p2@LRRFIP1!0.20!13.30!LRRFIP1;;chr4:87928413..87928433,+!p3@AFF1!0.20!8.19!AFF1;;chr14:100705335..100705360,+!p4@YY1!0.20!7.68!YY1;;chr19:2841459..2841490,+!p1@ZNF555!0.20!7.16!ZNF555;;chr16:4366021..4366045,+!p@chr16:4366021..4366045,+!0.20!6.14!GLIS2;;chr9:125667618..125667678,-!p2@RC3H2!0.20!5.63!RC3H2;;chr8:57123815..57123867,-!p1@PLAG1!0.20!5.12!PLAG1;;chr19:12721760..12721778,+!p3@ZNF791!0.20!4.09!ZNF791;;chr4:121843844..121843904,-!p1@PRDM5!0.20!2.56!PRDM5;;chr15:100106670..100106697,+!p4@MEF2A!0.20!1.54!MEF2A;;chr19:36980756..36980795,-!p3@ZNF566!0.20!1.54!ZNF566;;chr1:151032922..151032951,+!p2@MLLT11!0.20!1.54!MLLT11;;chr11:113930291..113930339,+!p2@ZBTB16!0.20!1.54!ZBTB16;;chr14:64970451..64970473,-!p6@ZBTB25!0.20!1.54!ZBTB25;;chr9:14082760..14082775,-!p6@NFIB!0.20!1.54!NFIB;;chr19:38183208..38183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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000057;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002334;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002579;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001178;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002323
|ffid_belonging_in_development=CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 43:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|comment=
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|rna_box=117
|rna_catalog_number=N/A
|rna_concentration=0.381
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.77
|rna_od260/280=2.03
|rna_position=E6
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=1.17E+08
|rna_weight_ug=9.5
|rnaseq_library_id=SRhi10008.CGTACG
|sample_age=24
|sample_category=primary cells
|sample_cell_catalog=F-OP-F
|sample_cell_line=
|sample_cell_lot=lot:OMM040705
|sample_cell_type=preadipocyte
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Zenbio
|sample_description=
|sample_dev_stage=24 years old adult
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.24115299727863e-220!GO:0005737;cytoplasm;1.77282462701232e-178!GO:0043226;organelle;2.34625012181188e-146!GO:0043229;intracellular organelle;4.21935241739241e-146!GO:0043231;intracellular membrane-bound organelle;8.63332521283882e-145!GO:0043227;membrane-bound organelle;1.71797161434806e-144!GO:0044444;cytoplasmic part;2.00177199355071e-137!GO:0044422;organelle part;3.877035606312e-111!GO:0044446;intracellular organelle part;6.86636939062356e-110!GO:0005515;protein binding;1.87410477772113e-74!GO:0032991;macromolecular complex;1.90254847137762e-72!GO:0044238;primary metabolic process;1.65652160182256e-65!GO:0044237;cellular metabolic process;4.48142297396314e-65!GO:0030529;ribonucleoprotein complex;3.3216734503971e-61!GO:0043170;macromolecule metabolic process;3.93525832457133e-59!GO:0005739;mitochondrion;2.69828319247735e-54!GO:0043233;organelle lumen;2.69828319247735e-54!GO:0031974;membrane-enclosed lumen;2.69828319247735e-54!GO:0031090;organelle membrane;6.39599375313549e-52!GO:0044428;nuclear part;1.15155937317828e-49!GO:0003723;RNA binding;8.58727656366308e-46!GO:0019538;protein metabolic process;2.59911132908224e-45!GO:0016043;cellular component organization and biogenesis;1.21685322724741e-42!GO:0015031;protein transport;4.23298268643875e-42!GO:0033036;macromolecule localization;2.60845467858023e-41!GO:0044260;cellular macromolecule metabolic process;3.55610467681817e-40!GO:0005634;nucleus;6.91614770743664e-40!GO:0045184;establishment of protein localization;4.07152914560238e-39!GO:0044267;cellular protein metabolic process;7.60492209175087e-39!GO:0008104;protein localization;1.0604659003161e-38!GO:0005840;ribosome;2.1777192959842e-37!GO:0043234;protein complex;3.76388912711884e-37!GO:0006412;translation;2.83293343361744e-36!GO:0044429;mitochondrial part;7.08953622704317e-36!GO:0009058;biosynthetic process;3.51732070128749e-34!GO:0005829;cytosol;2.58390060109733e-33!GO:0046907;intracellular transport;3.81527268308204e-33!GO:0031967;organelle envelope;5.71234106616295e-33!GO:0031975;envelope;1.27534128858349e-32!GO:0003735;structural constituent of ribosome;2.06171966173664e-32!GO:0006396;RNA processing;5.95914898132478e-32!GO:0009059;macromolecule biosynthetic process;7.01778723220302e-31!GO:0031981;nuclear lumen;2.24678545237839e-30!GO:0044249;cellular biosynthetic process;1.04972050983769e-29!GO:0016071;mRNA metabolic process;4.95194912746653e-29!GO:0006886;intracellular protein transport;2.49177836024455e-28!GO:0043283;biopolymer metabolic process;1.19934380754863e-27!GO:0033279;ribosomal subunit;2.34877881301011e-27!GO:0005783;endoplasmic reticulum;3.9521195260662e-26!GO:0008380;RNA splicing;6.37695586832201e-26!GO:0006397;mRNA processing;1.10660702218116e-24!GO:0005740;mitochondrial envelope;1.36965554921915e-24!GO:0010467;gene expression;2.06991673326371e-24!GO:0065003;macromolecular complex assembly;2.00467265021767e-23!GO:0031966;mitochondrial membrane;2.13421154314127e-23!GO:0019866;organelle inner membrane;2.52939915162702e-22!GO:0012505;endomembrane system;2.82848648370437e-22!GO:0005743;mitochondrial inner membrane;2.05795740498187e-21!GO:0022607;cellular component assembly;4.13821035910601e-21!GO:0006996;organelle organization and biogenesis;1.01201031904774e-20!GO:0051649;establishment of cellular localization;1.55325771992184e-20!GO:0051641;cellular localization;2.65557045219099e-20!GO:0006119;oxidative phosphorylation;5.28032550137509e-20!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.9413770225414e-20!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.91134439417281e-20!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.64162464297348e-20!GO:0005654;nucleoplasm;1.66244821249652e-19!GO:0044432;endoplasmic reticulum part;1.81828946608998e-19!GO:0005794;Golgi apparatus;2.52380056828714e-19!GO:0006457;protein folding;4.92054746087697e-19!GO:0043228;non-membrane-bound organelle;1.16546906512934e-18!GO:0043232;intracellular non-membrane-bound organelle;1.16546906512934e-18!GO:0048770;pigment granule;1.5767043751391e-18!GO:0042470;melanosome;1.5767043751391e-18!GO:0005681;spliceosome;2.6365216131144e-18!GO:0044455;mitochondrial membrane part;2.96599816270074e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.26520216307385e-16!GO:0016462;pyrophosphatase activity;1.41069218940491e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;2.1159276186823e-16!GO:0044451;nucleoplasm part;4.06539372318996e-16!GO:0048193;Golgi vesicle transport;4.17615526999313e-16!GO:0017111;nucleoside-triphosphatase activity;4.89586279072574e-16!GO:0044445;cytosolic part;1.11265110781554e-15!GO:0008134;transcription factor binding;1.38983167596615e-15!GO:0006512;ubiquitin cycle;2.80219379578604e-15!GO:0005746;mitochondrial respiratory chain;5.31121215442263e-15!GO:0016874;ligase activity;8.60516520514767e-15!GO:0000166;nucleotide binding;8.91262117081806e-15!GO:0051186;cofactor metabolic process;9.09575508538556e-15!GO:0016192;vesicle-mediated transport;1.3810341261194e-14!GO:0006605;protein targeting;2.02275568376657e-14!GO:0022618;protein-RNA complex assembly;2.13656284575001e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;2.9855620239252e-14!GO:0015934;large ribosomal subunit;3.25817103258175e-14!GO:0044265;cellular macromolecule catabolic process;4.23881371665512e-14!GO:0044257;cellular protein catabolic process;5.48396556750365e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.8443473155231e-14!GO:0015935;small ribosomal subunit;6.27257436868453e-14!GO:0019941;modification-dependent protein catabolic process;6.34026409310905e-14!GO:0043632;modification-dependent macromolecule catabolic process;6.34026409310905e-14!GO:0051082;unfolded protein binding;7.59044552705478e-14!GO:0031980;mitochondrial lumen;7.59044552705478e-14!GO:0005759;mitochondrial matrix;7.59044552705478e-14!GO:0006511;ubiquitin-dependent protein catabolic process;9.08835693386563e-14!GO:0043285;biopolymer catabolic process;1.29100599190854e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.7921533326134e-13!GO:0000502;proteasome complex (sensu Eukaryota);2.51187353829246e-13!GO:0050136;NADH dehydrogenase (quinone) activity;5.3264163516818e-13!GO:0003954;NADH dehydrogenase activity;5.3264163516818e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.3264163516818e-13!GO:0005789;endoplasmic reticulum membrane;6.25692472953677e-13!GO:0030163;protein catabolic process;2.19225423274879e-12!GO:0008135;translation factor activity, nucleic acid binding;2.4222991741845e-12!GO:0009057;macromolecule catabolic process;2.4222991741845e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.00573301814057e-12!GO:0009055;electron carrier activity;8.68059916142067e-12!GO:0044248;cellular catabolic process;9.28367992348612e-12!GO:0043412;biopolymer modification;1.0617724930767e-11!GO:0006732;coenzyme metabolic process;1.31261581945225e-11!GO:0005761;mitochondrial ribosome;2.05081285097109e-11!GO:0000313;organellar ribosome;2.05081285097109e-11!GO:0005730;nucleolus;2.06534312864326e-11!GO:0042775;organelle ATP synthesis coupled electron transport;2.1911518708735e-11!GO:0042773;ATP synthesis coupled electron transport;2.1911518708735e-11!GO:0005793;ER-Golgi intermediate compartment;2.36670545362796e-11!GO:0030964;NADH dehydrogenase complex (quinone);2.36670545362796e-11!GO:0045271;respiratory chain complex I;2.36670545362796e-11!GO:0005747;mitochondrial respiratory chain complex I;2.36670545362796e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.10985532915549e-11!GO:0006464;protein modification process;9.14489852365921e-11!GO:0017076;purine nucleotide binding;1.05385870351012e-10!GO:0006259;DNA metabolic process;1.24531386011243e-10!GO:0032553;ribonucleotide binding;1.25228546551983e-10!GO:0032555;purine ribonucleotide binding;1.25228546551983e-10!GO:0003712;transcription cofactor activity;1.62687519918466e-10!GO:0012501;programmed cell death;2.64397522759521e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.01650194893608e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.47665547508688e-10!GO:0006915;apoptosis;8.06067319474762e-10!GO:0006413;translational initiation;1.02074147674267e-09!GO:0019787;small conjugating protein ligase activity;1.44828950497614e-09!GO:0003743;translation initiation factor activity;1.53480315521894e-09!GO:0006446;regulation of translational initiation;1.54730983175391e-09!GO:0008639;small protein conjugating enzyme activity;1.83583233107029e-09!GO:0048523;negative regulation of cellular process;1.97695650235567e-09!GO:0008219;cell death;1.97695650235567e-09!GO:0016265;death;1.97695650235567e-09!GO:0008565;protein transporter activity;2.12444000130312e-09!GO:0009259;ribonucleotide metabolic process;2.48754063913547e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.60506626047523e-09!GO:0007049;cell cycle;2.71037570550938e-09!GO:0005788;endoplasmic reticulum lumen;3.02078997581147e-09!GO:0004842;ubiquitin-protein ligase activity;3.02395676982304e-09!GO:0005635;nuclear envelope;3.59751397947291e-09!GO:0006888;ER to Golgi vesicle-mediated transport;3.86372084054791e-09!GO:0016070;RNA metabolic process;4.54733355813948e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.76778448927418e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;4.84870859946313e-09!GO:0000375;RNA splicing, via transesterification reactions;4.84870859946313e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.84870859946313e-09!GO:0006913;nucleocytoplasmic transport;5.60891972081379e-09!GO:0031965;nuclear membrane;6.15863905412456e-09!GO:0043687;post-translational protein modification;6.20798078090058e-09!GO:0006163;purine nucleotide metabolic process;7.55263160859585e-09!GO:0009150;purine ribonucleotide metabolic process;7.76738960222811e-09!GO:0005768;endosome;9.78820375799751e-09!GO:0051169;nuclear transport;1.07124695972707e-08!GO:0003676;nucleic acid binding;1.2009663322862e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.26193307144694e-08!GO:0006461;protein complex assembly;1.42713681074818e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.43390956719701e-08!GO:0016881;acid-amino acid ligase activity;1.54559254148256e-08!GO:0044431;Golgi apparatus part;1.67212702238348e-08!GO:0030120;vesicle coat;2.10348720476815e-08!GO:0030662;coated vesicle membrane;2.10348720476815e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.17511373254207e-08!GO:0009144;purine nucleoside triphosphate metabolic process;2.17511373254207e-08!GO:0009141;nucleoside triphosphate metabolic process;2.49161832440272e-08!GO:0009260;ribonucleotide biosynthetic process;3.44561012600517e-08!GO:0016023;cytoplasmic membrane-bound vesicle;3.4556443426078e-08!GO:0009152;purine ribonucleotide biosynthetic process;3.45859051823335e-08!GO:0006164;purine nucleotide biosynthetic process;3.45859051823335e-08!GO:0016604;nuclear body;3.54838430465085e-08!GO:0031988;membrane-bound vesicle;3.7817227047398e-08!GO:0016491;oxidoreductase activity;4.98474333738702e-08!GO:0015986;ATP synthesis coupled proton transport;5.50928189578339e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.50928189578339e-08!GO:0042623;ATPase activity, coupled;5.52432283200866e-08!GO:0005524;ATP binding;6.29859038783964e-08!GO:0009142;nucleoside triphosphate biosynthetic process;6.56692636837113e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.56692636837113e-08!GO:0009060;aerobic respiration;7.6601923323756e-08!GO:0016887;ATPase activity;8.16875036246124e-08!GO:0048519;negative regulation of biological process;9.0797685118511e-08!GO:0032559;adenyl ribonucleotide binding;9.48224325790818e-08!GO:0030554;adenyl nucleotide binding;9.89779930402902e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.89779930402902e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.89779930402902e-08!GO:0003924;GTPase activity;1.10808901214904e-07!GO:0017038;protein import;1.21590563317482e-07!GO:0046034;ATP metabolic process;1.43747170637254e-07!GO:0005773;vacuole;1.45924352900646e-07!GO:0045333;cellular respiration;1.53277714371688e-07!GO:0044453;nuclear membrane part;1.73821901867627e-07!GO:0048475;coated membrane;1.99044229338488e-07!GO:0030117;membrane coat;1.99044229338488e-07!GO:0019829;cation-transporting ATPase activity;2.02186127268314e-07!GO:0006974;response to DNA damage stimulus;2.08015678418629e-07!GO:0008361;regulation of cell size;2.68187152147198e-07!GO:0051246;regulation of protein metabolic process;3.17835865502165e-07!GO:0009056;catabolic process;3.32476218343195e-07!GO:0015078;hydrogen ion transmembrane transporter activity;3.35432500241681e-07!GO:0031982;vesicle;3.77046185848939e-07!GO:0031410;cytoplasmic vesicle;4.24086170093044e-07!GO:0003714;transcription corepressor activity;4.36310156989773e-07!GO:0006366;transcription from RNA polymerase II promoter;4.364037671775e-07!GO:0016049;cell growth;5.35588663309935e-07!GO:0006754;ATP biosynthetic process;5.75829281741344e-07!GO:0006753;nucleoside phosphate metabolic process;5.75829281741344e-07!GO:0005798;Golgi-associated vesicle;6.83389569396206e-07!GO:0030036;actin cytoskeleton organization and biogenesis;7.25198530516921e-07!GO:0016607;nuclear speck;7.71258547799671e-07!GO:0051188;cofactor biosynthetic process;9.92743201540165e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.06757353296881e-06!GO:0022402;cell cycle process;1.13808443817222e-06!GO:0006099;tricarboxylic acid cycle;1.54259218688387e-06!GO:0046356;acetyl-CoA catabolic process;1.54259218688387e-06!GO:0042254;ribosome biogenesis and assembly;1.77001400437356e-06!GO:0051187;cofactor catabolic process;1.82435640851447e-06!GO:0032446;protein modification by small protein conjugation;1.88384538975813e-06!GO:0000323;lytic vacuole;1.95381498290083e-06!GO:0005764;lysosome;1.95381498290083e-06!GO:0051789;response to protein stimulus;2.12509547273997e-06!GO:0006986;response to unfolded protein;2.12509547273997e-06!GO:0016567;protein ubiquitination;2.19057755873292e-06!GO:0031252;leading edge;2.20881627092231e-06!GO:0043069;negative regulation of programmed cell death;2.2579594346018e-06!GO:0009109;coenzyme catabolic process;2.30174669538917e-06!GO:0044440;endosomal part;2.4038990660613e-06!GO:0010008;endosome membrane;2.4038990660613e-06!GO:0009719;response to endogenous stimulus;2.52463891151006e-06!GO:0000139;Golgi membrane;2.61523399909072e-06!GO:0008654;phospholipid biosynthetic process;2.72006094913726e-06!GO:0007005;mitochondrion organization and biogenesis;2.82875675088468e-06!GO:0001558;regulation of cell growth;3.49879545350253e-06!GO:0043067;regulation of programmed cell death;3.73062940289104e-06!GO:0030133;transport vesicle;3.74815305008287e-06!GO:0050794;regulation of cellular process;4.05819752881573e-06!GO:0006084;acetyl-CoA metabolic process;4.105455231945e-06!GO:0065002;intracellular protein transport across a membrane;4.11406550476716e-06!GO:0016469;proton-transporting two-sector ATPase complex;4.33745101144793e-06!GO:0043066;negative regulation of apoptosis;5.35244355769714e-06!GO:0030029;actin filament-based process;6.01057939553754e-06!GO:0042981;regulation of apoptosis;6.04162311883865e-06!GO:0016564;transcription repressor activity;6.39141980974377e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.07322417681895e-06!GO:0004812;aminoacyl-tRNA ligase activity;7.07322417681895e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.07322417681895e-06!GO:0005643;nuclear pore;7.19881848063323e-06!GO:0043038;amino acid activation;7.23848776543849e-06!GO:0006418;tRNA aminoacylation for protein translation;7.23848776543849e-06!GO:0043039;tRNA aminoacylation;7.23848776543849e-06!GO:0005770;late endosome;7.63971128195784e-06!GO:0016853;isomerase activity;7.91884286436461e-06!GO:0006399;tRNA metabolic process;7.9906464505384e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.68078853697003e-06!GO:0006613;cotranslational protein targeting to membrane;9.77965205054478e-06!GO:0006752;group transfer coenzyme metabolic process;9.78706307666923e-06!GO:0000151;ubiquitin ligase complex;1.05770328928932e-05!GO:0009117;nucleotide metabolic process;1.08698689787312e-05!GO:0006091;generation of precursor metabolites and energy;1.19891210825411e-05!GO:0005667;transcription factor complex;1.25227731340112e-05!GO:0008026;ATP-dependent helicase activity;1.253015091441e-05!GO:0051170;nuclear import;1.30384552644589e-05!GO:0051726;regulation of cell cycle;1.37835572186164e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.5028561756916e-05!GO:0006281;DNA repair;1.56662401909964e-05!GO:0000074;regulation of progression through cell cycle;1.61037385402031e-05!GO:0006606;protein import into nucleus;1.7449330429956e-05!GO:0004386;helicase activity;1.76602693575828e-05!GO:0000278;mitotic cell cycle;2.11179656083072e-05!GO:0006916;anti-apoptosis;2.11579612427101e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.34099778898853e-05!GO:0005525;GTP binding;2.42231455273637e-05!GO:0009108;coenzyme biosynthetic process;3.21784050335993e-05!GO:0045259;proton-transporting ATP synthase complex;3.23404268642788e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.28283052642949e-05!GO:0006793;phosphorus metabolic process;3.36239447339021e-05!GO:0006796;phosphate metabolic process;3.36239447339021e-05!GO:0005905;coated pit;3.54380050054072e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.74666454962339e-05!GO:0030867;rough endoplasmic reticulum membrane;4.20899024835051e-05!GO:0015980;energy derivation by oxidation of organic compounds;4.35210811314016e-05!GO:0031324;negative regulation of cellular metabolic process;4.60828991614964e-05!GO:0016787;hydrolase activity;5.35428215950255e-05!GO:0005791;rough endoplasmic reticulum;5.35428215950255e-05!GO:0044262;cellular carbohydrate metabolic process;5.43040606480865e-05!GO:0046930;pore complex;5.43040606480865e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;5.88498868909028e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;6.31378307752564e-05!GO:0045454;cell redox homeostasis;6.49529485319053e-05!GO:0003697;single-stranded DNA binding;6.92929043908759e-05!GO:0050789;regulation of biological process;8.24927500711937e-05!GO:0006403;RNA localization;8.43743022684786e-05!GO:0050657;nucleic acid transport;8.52333675914301e-05!GO:0051236;establishment of RNA localization;8.52333675914301e-05!GO:0050658;RNA transport;8.52333675914301e-05!GO:0008092;cytoskeletal protein binding;8.54103472869374e-05!GO:0016859;cis-trans isomerase activity;9.78185016002108e-05!GO:0016310;phosphorylation;9.82414094645433e-05!GO:0045786;negative regulation of progression through cell cycle;0.000104926922136235!GO:0030532;small nuclear ribonucleoprotein complex;0.000105625966237395!GO:0006612;protein targeting to membrane;0.000114160950703292!GO:0005769;early endosome;0.000116492369223304!GO:0004298;threonine endopeptidase activity;0.000117626582057133!GO:0033116;ER-Golgi intermediate compartment membrane;0.000117626582057133!GO:0000245;spliceosome assembly;0.00012000214119649!GO:0003724;RNA helicase activity;0.000120273598369955!GO:0007010;cytoskeleton organization and biogenesis;0.000126089812367469!GO:0032561;guanyl ribonucleotide binding;0.000127875849808788!GO:0019001;guanyl nucleotide binding;0.000127875849808788!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000138903947333397!GO:0043566;structure-specific DNA binding;0.000149621808330169!GO:0043623;cellular protein complex assembly;0.000174082354603884!GO:0019867;outer membrane;0.000175888092430562!GO:0046474;glycerophospholipid biosynthetic process;0.000182989312421277!GO:0015630;microtubule cytoskeleton;0.000185313561504474!GO:0005813;centrosome;0.000216737454881769!GO:0009892;negative regulation of metabolic process;0.000217863077496878!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000237818546895046!GO:0040008;regulation of growth;0.000242321026208084!GO:0031968;organelle outer membrane;0.000277862429080643!GO:0030663;COPI coated vesicle membrane;0.000279333567934298!GO:0030126;COPI vesicle coat;0.000279333567934298!GO:0004576;oligosaccharyl transferase activity;0.000292086939257354!GO:0005048;signal sequence binding;0.00029625736850169!GO:0003713;transcription coactivator activity;0.000303035295432636!GO:0005885;Arp2/3 protein complex;0.000369042594108761!GO:0005815;microtubule organizing center;0.000410968958327796!GO:0005762;mitochondrial large ribosomal subunit;0.000416934267752669!GO:0000315;organellar large ribosomal subunit;0.000416934267752669!GO:0008250;oligosaccharyl transferase complex;0.0004178949803084!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000450175239060932!GO:0016044;membrane organization and biogenesis;0.000515350701358659!GO:0006364;rRNA processing;0.000530551993343279!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00053142430158491!GO:0015399;primary active transmembrane transporter activity;0.00053142430158491!GO:0016740;transferase activity;0.000532793046495469!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000556061419660603!GO:0008610;lipid biosynthetic process;0.000572523822386375!GO:0030137;COPI-coated vesicle;0.000587965734643959!GO:0016563;transcription activator activity;0.000684027095409331!GO:0043021;ribonucleoprotein binding;0.000702950417224731!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00078649982298391!GO:0043284;biopolymer biosynthetic process;0.000797082318039273!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000806353675523323!GO:0016072;rRNA metabolic process;0.000884324867546285!GO:0019899;enzyme binding;0.000960781230649671!GO:0006260;DNA replication;0.00101519583769486!GO:0048522;positive regulation of cellular process;0.00102608607659866!GO:0051920;peroxiredoxin activity;0.00107308590933378!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00107308590933378!GO:0007050;cell cycle arrest;0.00108718543135536!GO:0030658;transport vesicle membrane;0.00108748136131462!GO:0030027;lamellipodium;0.0011562162235136!GO:0046467;membrane lipid biosynthetic process;0.00120122226051711!GO:0065004;protein-DNA complex assembly;0.00120244867290977!GO:0051028;mRNA transport;0.00125170685847459!GO:0005741;mitochondrial outer membrane;0.0012596629422466!GO:0048471;perinuclear region of cytoplasm;0.00136164879131583!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.001418569607705!GO:0016779;nucleotidyltransferase activity;0.00143091306779338!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00145093971419651!GO:0006323;DNA packaging;0.0014910446575854!GO:0051329;interphase of mitotic cell cycle;0.00150420972279985!GO:0046489;phosphoinositide biosynthetic process;0.00150443901592701!GO:0006650;glycerophospholipid metabolic process;0.00159932056957414!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00159932056957414!GO:0030176;integral to endoplasmic reticulum membrane;0.00166750672529926!GO:0006979;response to oxidative stress;0.001674749756399!GO:0044420;extracellular matrix part;0.00168259757145406!GO:0051325;interphase;0.00178021956419853!GO:0000314;organellar small ribosomal subunit;0.00178850588809256!GO:0005763;mitochondrial small ribosomal subunit;0.00178850588809256!GO:0008186;RNA-dependent ATPase activity;0.00178850588809256!GO:0018196;peptidyl-asparagine modification;0.00186050416570208!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00186050416570208!GO:0006891;intra-Golgi vesicle-mediated transport;0.00198644569387078!GO:0030659;cytoplasmic vesicle membrane;0.00203966332018202!GO:0022403;cell cycle phase;0.00213207829761722!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00214028781856201!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00214366257844344!GO:0051427;hormone receptor binding;0.00216871065929118!GO:0006839;mitochondrial transport;0.00220696071636866!GO:0007243;protein kinase cascade;0.0023000639299354!GO:0015992;proton transport;0.00253194075051151!GO:0048468;cell development;0.00256171166359554!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.00259686876733563!GO:0051276;chromosome organization and biogenesis;0.00266431016260845!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00278425794703701!GO:0006818;hydrogen transport;0.00283844679417593!GO:0016481;negative regulation of transcription;0.00290307167639816!GO:0007264;small GTPase mediated signal transduction;0.00291842881618128!GO:0043492;ATPase activity, coupled to movement of substances;0.00304202863055719!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00308514257144549!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00308716019239139!GO:0003779;actin binding;0.00309176786787132!GO:0009165;nucleotide biosynthetic process;0.00315615624545326!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00328866229125673!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00328866229125673!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00333471914928064!GO:0030660;Golgi-associated vesicle membrane;0.00333803764248264!GO:0051301;cell division;0.00335705427975874!GO:0048500;signal recognition particle;0.00337395110712101!GO:0045792;negative regulation of cell size;0.00339189736984765!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00340422481357423!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00340422481357423!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00340422481357423!GO:0051168;nuclear export;0.00340422481357423!GO:0006892;post-Golgi vesicle-mediated transport;0.00344894441917506!GO:0035257;nuclear hormone receptor binding;0.00361837431436332!GO:0030134;ER to Golgi transport vesicle;0.00372053963733849!GO:0016126;sterol biosynthetic process;0.0037949068335125!GO:0006414;translational elongation;0.00382369287469763!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00389419395396027!GO:0007040;lysosome organization and biogenesis;0.00393182118622639!GO:0045045;secretory pathway;0.00394306059123841!GO:0030127;COPII vesicle coat;0.00401043090044995!GO:0012507;ER to Golgi transport vesicle membrane;0.00401043090044995!GO:0022890;inorganic cation transmembrane transporter activity;0.00405791285126382!GO:0031072;heat shock protein binding;0.00413972875623558!GO:0051128;regulation of cellular component organization and biogenesis;0.00414995650855256!GO:0016197;endosome transport;0.00423296315213333!GO:0004004;ATP-dependent RNA helicase activity;0.00439866260078505!GO:0005774;vacuolar membrane;0.0044188492142782!GO:0030308;negative regulation of cell growth;0.00455189668272392!GO:0016568;chromatin modification;0.00468388857616705!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00478816454277956!GO:0045047;protein targeting to ER;0.00478816454277956!GO:0030118;clathrin coat;0.00493384317258979!GO:0000087;M phase of mitotic cell cycle;0.00538962096099001!GO:0044433;cytoplasmic vesicle part;0.00552825932764011!GO:0048487;beta-tubulin binding;0.00554038808509171!GO:0046483;heterocycle metabolic process;0.00567157999456097!GO:0051087;chaperone binding;0.00567186550142867!GO:0001726;ruffle;0.00570255038992024!GO:0030132;clathrin coat of coated pit;0.005870858737187!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00601221692795594!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00620868287171999!GO:0006383;transcription from RNA polymerase III promoter;0.00630420677476884!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00645349100342776!GO:0031902;late endosome membrane;0.00658341518018221!GO:0005869;dynactin complex;0.00665423960703568!GO:0019843;rRNA binding;0.00681569389260359!GO:0005581;collagen;0.00684212302030988!GO:0007067;mitosis;0.0068606639319505!GO:0043681;protein import into mitochondrion;0.00705797451355573!GO:0043433;negative regulation of transcription factor activity;0.00737793010997747!GO:0006509;membrane protein ectodomain proteolysis;0.00737793010997747!GO:0033619;membrane protein proteolysis;0.00737793010997747!GO:0016363;nuclear matrix;0.00753081088432441!GO:0051252;regulation of RNA metabolic process;0.00776369614962811!GO:0005583;fibrillar collagen;0.00778741510190398!GO:0065009;regulation of a molecular function;0.00794851508773511!GO:0019752;carboxylic acid metabolic process;0.00801852769833412!GO:0004177;aminopeptidase activity;0.00810560069510836!GO:0008154;actin polymerization and/or depolymerization;0.00810961492793531!GO:0007033;vacuole organization and biogenesis;0.00820789233344792!GO:0003899;DNA-directed RNA polymerase activity;0.00826532850641155!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00826532850641155!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00826532850641155!GO:0065007;biological regulation;0.0084819483595667!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00849756163639318!GO:0006082;organic acid metabolic process;0.00877631814022083!GO:0003729;mRNA binding;0.00880919463912144!GO:0017166;vinculin binding;0.00890253603792617!GO:0050811;GABA receptor binding;0.00890253603792617!GO:0007006;mitochondrial membrane organization and biogenesis;0.00900723920929963!GO:0000059;protein import into nucleus, docking;0.00917654157260013!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00920222400909282!GO:0015002;heme-copper terminal oxidase activity;0.00920222400909282!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00920222400909282!GO:0004129;cytochrome-c oxidase activity;0.00920222400909282!GO:0006402;mRNA catabolic process;0.00920222400909282!GO:0030521;androgen receptor signaling pathway;0.00920222400909282!GO:0043488;regulation of mRNA stability;0.0100199655621785!GO:0043487;regulation of RNA stability;0.0100199655621785!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0104137630646715!GO:0006626;protein targeting to mitochondrion;0.0106860852630272!GO:0012506;vesicle membrane;0.0108232267850222!GO:0044437;vacuolar part;0.0110009531398074!GO:0001527;microfibril;0.0111281176886772!GO:0008139;nuclear localization sequence binding;0.0112928872789849!GO:0007034;vacuolar transport;0.0113975116457332!GO:0006790;sulfur metabolic process;0.0114371316977751!GO:0006643;membrane lipid metabolic process;0.0115059186205347!GO:0051540;metal cluster binding;0.0115059186205347!GO:0051536;iron-sulfur cluster binding;0.0115059186205347!GO:0005520;insulin-like growth factor binding;0.0117303149722384!GO:0008312;7S RNA binding;0.0120070495991381!GO:0046519;sphingoid metabolic process;0.0123890141056969!GO:0008180;signalosome;0.0124825536130479!GO:0030384;phosphoinositide metabolic process;0.0125216613988505!GO:0005694;chromosome;0.012982654415508!GO:0006333;chromatin assembly or disassembly;0.0137483714113876!GO:0030880;RNA polymerase complex;0.0139051465495581!GO:0003690;double-stranded DNA binding;0.0151299699847254!GO:0035258;steroid hormone receptor binding;0.0152051532442752!GO:0016860;intramolecular oxidoreductase activity;0.0152051532442752!GO:0005765;lysosomal membrane;0.0157653445121874!GO:0006672;ceramide metabolic process;0.0159342430642851!GO:0006497;protein amino acid lipidation;0.0160173063079943!GO:0031901;early endosome membrane;0.0161581227018162!GO:0003711;transcription elongation regulator activity;0.0165983500753247!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0169798165191181!GO:0000209;protein polyubiquitination;0.0170618991821727!GO:0005862;muscle thin filament tropomyosin;0.0170741195027019!GO:0007160;cell-matrix adhesion;0.017142173024374!GO:0005595;collagen type XII;0.0172252086185872!GO:0019222;regulation of metabolic process;0.0176772733589079!GO:0051287;NAD binding;0.0180647432601286!GO:0032940;secretion by cell;0.0182416738992009!GO:0006635;fatty acid beta-oxidation;0.0183161929298161!GO:0003746;translation elongation factor activity;0.0183161929298161!GO:0006897;endocytosis;0.0184239432960361!GO:0010324;membrane invagination;0.0184239432960361!GO:0006118;electron transport;0.0185364512499065!GO:0031589;cell-substrate adhesion;0.0185364512499065!GO:0030518;steroid hormone receptor signaling pathway;0.0185467088447877!GO:0030125;clathrin vesicle coat;0.0188435987951486!GO:0030665;clathrin coated vesicle membrane;0.0188435987951486!GO:0045926;negative regulation of growth;0.0191482960240157!GO:0006506;GPI anchor biosynthetic process;0.0201341682025227!GO:0006354;RNA elongation;0.0202116687582889!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0205419679428231!GO:0033043;regulation of organelle organization and biogenesis;0.0205419679428231!GO:0003684;damaged DNA binding;0.0206783978510678!GO:0031418;L-ascorbic acid binding;0.0207735238915033!GO:0000082;G1/S transition of mitotic cell cycle;0.0207735238915033!GO:0030041;actin filament polymerization;0.0212897875763569!GO:0006644;phospholipid metabolic process;0.0216604992444871!GO:0048518;positive regulation of biological process;0.0217324892474019!GO:0007030;Golgi organization and biogenesis;0.0217452863378207!GO:0044255;cellular lipid metabolic process;0.0217979628681673!GO:0006984;ER-nuclear signaling pathway;0.022004633799671!GO:0006695;cholesterol biosynthetic process;0.022069883073893!GO:0033559;unsaturated fatty acid metabolic process;0.022069883073893!GO:0006636;unsaturated fatty acid biosynthetic process;0.022069883073893!GO:0008484;sulfuric ester hydrolase activity;0.022121352626871!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0221549183000058!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0221549183000058!GO:0006352;transcription initiation;0.0223861012460653!GO:0032984;macromolecular complex disassembly;0.0225762729075146!GO:0015631;tubulin binding;0.0227685455210226!GO:0007021;tubulin folding;0.0234149268130461!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0240052860141245!GO:0009967;positive regulation of signal transduction;0.0241072068022862!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0242937863439357!GO:0000049;tRNA binding;0.0247702188884415!GO:0035035;histone acetyltransferase binding;0.0250247048753798!GO:0045936;negative regulation of phosphate metabolic process;0.0252199464393838!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0252199464393838!GO:0000428;DNA-directed RNA polymerase complex;0.0252199464393838!GO:0008147;structural constituent of bone;0.0257225587351119!GO:0006740;NADPH regeneration;0.0257386414836455!GO:0006098;pentose-phosphate shunt;0.0257386414836455!GO:0006505;GPI anchor metabolic process;0.0258677455842905!GO:0031529;ruffle organization and biogenesis;0.0263492594203902!GO:0007041;lysosomal transport;0.0264032614092687!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0265199525210271!GO:0031543;peptidyl-proline dioxygenase activity;0.0265199525210271!GO:0005975;carbohydrate metabolic process;0.027029689830578!GO:0000902;cell morphogenesis;0.0270754720834543!GO:0032989;cellular structure morphogenesis;0.0270754720834543!GO:0008047;enzyme activator activity;0.02729290931663!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.02729290931663!GO:0009112;nucleobase metabolic process;0.0277029370124812!GO:0042158;lipoprotein biosynthetic process;0.0278610020470024!GO:0006289;nucleotide-excision repair;0.0279830869688473!GO:0006595;polyamine metabolic process;0.028116803590534!GO:0005665;DNA-directed RNA polymerase II, core complex;0.028327294926979!GO:0006778;porphyrin metabolic process;0.0286731488473119!GO:0033013;tetrapyrrole metabolic process;0.0286731488473119!GO:0006607;NLS-bearing substrate import into nucleus;0.0287847277983467!GO:0051101;regulation of DNA binding;0.0290128296625529!GO:0016272;prefoldin complex;0.029282213342995!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0302480294192888!GO:0030119;AP-type membrane coat adaptor complex;0.0302480294192888!GO:0042802;identical protein binding;0.0305220147260794!GO:0005832;chaperonin-containing T-complex;0.0308213680620897!GO:0006302;double-strand break repair;0.0314384324696152!GO:0006693;prostaglandin metabolic process;0.0325906444128081!GO:0006692;prostanoid metabolic process;0.0325906444128081!GO:0050662;coenzyme binding;0.0331582659047194!GO:0000096;sulfur amino acid metabolic process;0.0336657182136086!GO:0016251;general RNA polymerase II transcription factor activity;0.0344058070561803!GO:0050681;androgen receptor binding;0.0344058070561803!GO:0030433;ER-associated protein catabolic process;0.0349952330354113!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0349952330354113!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0350436277124329!GO:0019798;procollagen-proline dioxygenase activity;0.0352177531132311!GO:0030140;trans-Golgi network transport vesicle;0.0358483745414987!GO:0000287;magnesium ion binding;0.0360299257723113!GO:0000339;RNA cap binding;0.036085771033619!GO:0051098;regulation of binding;0.0363295458336624!GO:0031124;mRNA 3'-end processing;0.0370913454526436!GO:0045639;positive regulation of myeloid cell differentiation;0.0371834912926898!GO:0006417;regulation of translation;0.0375810076351238!GO:0043022;ribosome binding;0.0376397732765004!GO:0030145;manganese ion binding;0.0380551846742746!GO:0006401;RNA catabolic process;0.038172273760798!GO:0051539;4 iron, 4 sulfur cluster binding;0.0385990748198882!GO:0022408;negative regulation of cell-cell adhesion;0.0388815176529047!GO:0043241;protein complex disassembly;0.039225855978129!GO:0043624;cellular protein complex disassembly;0.0393838191208634!GO:0031625;ubiquitin protein ligase binding;0.0394493788805443!GO:0044427;chromosomal part;0.0398998420036902!GO:0006611;protein export from nucleus;0.0408868155448396!GO:0008632;apoptotic program;0.0414415778087473!GO:0005777;peroxisome;0.0422827362195956!GO:0042579;microbody;0.0422827362195956!GO:0045892;negative regulation of transcription, DNA-dependent;0.0433421919184869!GO:0001725;stress fiber;0.0433421919184869!GO:0032432;actin filament bundle;0.0433421919184869!GO:0048144;fibroblast proliferation;0.0434319241188702!GO:0048145;regulation of fibroblast proliferation;0.0434319241188702!GO:0008320;protein transmembrane transporter activity;0.0436565403131578!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0438220250249741!GO:0051271;negative regulation of cell motility;0.0440278082667541!GO:0005586;collagen type III;0.044480396369979!GO:0000030;mannosyltransferase activity;0.0450666361040642!GO:0033673;negative regulation of kinase activity;0.0451177961330315!GO:0006469;negative regulation of protein kinase activity;0.0451177961330315!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0454798575844789!GO:0005801;cis-Golgi network;0.0459632886436816!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.046026855188696!GO:0045893;positive regulation of transcription, DNA-dependent;0.046026855188696!GO:0030032;lamellipodium biogenesis;0.0460991450553873!GO:0005784;translocon complex;0.0461288033122747!GO:0016408;C-acyltransferase activity;0.0463237334243146!GO:0042585;germinal vesicle;0.0467272577250754!GO:0042168;heme metabolic process;0.0477855478599133!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0482745843106502!GO:0030131;clathrin adaptor complex;0.0484102469404915!GO:0008022;protein C-terminus binding;0.0484460194154298!GO:0005819;spindle;0.0484854619612597!GO:0005684;U2-dependent spliceosome;0.0484854619612597!GO:0051348;negative regulation of transferase activity;0.0489003225714433!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0489003225714433!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0489003225714433!GO:0003756;protein disulfide isomerase activity;0.0489793508883326!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0489793508883326!GO:0006334;nucleosome assembly;0.0494270600835032!GO:0030503;regulation of cell redox homeostasis;0.0496253605030033!GO:0006749;glutathione metabolic process;0.0496358115449149
|sample_id=11329
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=omentum
|top_motifs=HOX{A6,A7,B6,B7}:1.92545557997;MAFB:1.83524311417;GZF1:1.80072212628;HES1:1.61151380873;TEAD1:1.51574510646;NKX3-1:1.49760314082;ESR1:1.47702032951;XBP1:1.46875300694;SMAD1..7,9:1.44397168075;HMGA1,2:1.42799538341;MYBL2:1.4245513539;ALX4:1.4068173243;GLI1..3:1.40502596015;EVI1:1.39569505278;TP53:1.3942863528;IKZF1:1.35306959954;SRF:1.29516485114;ZNF238:1.29303365066;TFAP4:1.2838151108;NFE2L1:1.27635952213;GCM1,2:1.27543940204;FOXL1:1.27375669548;UFEwm:1.27157144664;NFATC1..3:1.25154678484;ATF6:1.21332203071;PAX1,9:1.20447084533;NR3C1:1.18150457013;TBX4,5:1.13040550291;NFIX:1.11854237704;TEF:1.09628764433;HMX1:1.08247344462;TAL1_TCF{3,4,12}:1.03038423312;MAZ:1.03018913982;RXR{A,B,G}:1.0244948264;HOX{A4,D4}:1.00384728966;FOXO1,3,4:0.9991187718;MTE{core}:0.96537226311;NKX2-1,4:0.951605071198;NANOG{mouse}:0.942743723733;EBF1:0.90832035222;ADNP_IRX_SIX_ZHX:0.904669346384;GATA4:0.893701525359;HOX{A5,B5}:0.876526059205;T:0.866528977022;EN1,2:0.84274487492;TFCP2:0.780423768454;GTF2A1,2:0.753882409178;KLF4:0.753793098645;GTF2I:0.73879220752;NKX2-2,8:0.725380101663;HIF1A:0.702791357505;LHX3,4:0.693623331247;GFI1B:0.684955513454;TBP:0.678889981957;FOX{I1,J2}:0.677297955021;NKX3-2:0.644094098352;FOXA2:0.628646934155;SOX5:0.615236314264;TLX1..3_NFIC{dimer}:0.606079493718;HIC1:0.605397246769;ZNF423:0.591056575639;TFAP2B:0.554813013205;HSF1,2:0.546604049241;XCPE1{core}:0.537472428992;NR6A1:0.516869972974;NHLH1,2:0.500190612994;MEF2{A,B,C,D}:0.490983545679;ARID5B:0.482579376534;PATZ1:0.467873493853;RXRA_VDR{dimer}:0.465102507739;ZNF148:0.448921029542;HBP1_HMGB_SSRP1_UBTF:0.420801708763;DBP:0.412376336079;TFAP2{A,C}:0.392407246042;HLF:0.369444618233;CDC5L:0.340689690361;SOX17:0.326281999627;MZF1:0.293783467627;CRX:0.291076426441;PRDM1:0.2732528767;STAT2,4,6:0.263702011363;AR:0.263541714927;STAT1,3:0.26275439814;NFE2L2:0.254025221621;GFI1:0.232947745494;MTF1:0.23230414595;ZBTB6:0.20839340311;EGR1..3:0.196851188603;MYB:0.18924125836;MYFfamily:0.142798629482;SREBF1,2:0.136811808005;HAND1,2:0.119117640762;CEBPA,B_DDIT3:0.116156412769;ZNF384:0.114101409378;FOX{D1,D2}:0.0956336337869;PAX5:0.086022377253;NR1H4:0.0818449142766;PRRX1,2:0.0772961153174;PAX8:0.0768943507537;PAX2:0.00231935641151;TGIF1:-0.0136992640478;SOX2:-0.02579541314;OCT4_SOX2{dimer}:-0.0346218945096;STAT5{A,B}:-0.0540963382699;BACH2:-0.0638168957905;SPZ1:-0.0642810337717;HOXA9_MEIS1:-0.077140832184;RREB1:-0.0928351882825;AHR_ARNT_ARNT2:-0.0949364876086;NKX2-3_NKX2-5:-0.100870430552;POU6F1:-0.141240461037;MED-1{core}:-0.154932237217;LEF1_TCF7_TCF7L1,2:-0.168782207091;JUN:-0.169999943905;EP300:-0.173910066478;IRF1,2:-0.174917150405;HNF1A:-0.176553900325;FOSL2:-0.18062841014;ZNF143:-0.186502554206;NFE2:-0.201776400133;POU5F1:-0.22228388461;HNF4A_NR2F1,2:-0.23395959495;bHLH_family:-0.238177354807;REST:-0.280639434153;ELK1,4_GABP{A,B1}:-0.29431838815;NRF1:-0.307016166408;NKX6-1,2:-0.314150475219;CREB1:-0.318904526113;TFDP1:-0.318952922157;NFIL3:-0.335888120826;ZIC1..3:-0.337052923083;FOS_FOS{B,L1}_JUN{B,D}:-0.340062199439;SP1:-0.360288604094;AIRE:-0.367396102249;RFX1:-0.367946690317;BPTF:-0.39278463981;FOXP3:-0.393452822383;ATF2:-0.397196084568;DMAP1_NCOR{1,2}_SMARC:-0.402318873636;PPARG:-0.40414950716;RUNX1..3:-0.407969075283;YY1:-0.412332701675;NANOG:-0.412990838896;TLX2:-0.440467112525;ETS1,2:-0.450951862702;IKZF2:-0.459011347888;SPI1:-0.497716292898;FOXD3:-0.51035512878;ATF5_CREB3:-0.532495610348;ESRRA:-0.544919142206;ONECUT1,2:-0.562461325016;POU3F1..4:-0.575026310864;TOPORS:-0.579105969388;PAX6:-0.593556048033;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.595626595421;NFKB1_REL_RELA:-0.603733801503;NR5A1,2:-0.606383100294;ELF1,2,4:-0.608975837838;SPIB:-0.646770889245;SOX{8,9,10}:-0.651369294207;IRF7:-0.662454390111;FOXN1:-0.671401757239;PAX4:-0.684250564886;ZFP161:-0.691369621883;SNAI1..3:-0.730203567662;GATA6:-0.739461213058;FOX{F1,F2,J1}:-0.758024236983;BREu{core}:-0.769417610728;FOXQ1:-0.772481438753;E2F1..5:-0.776990411987;ZBTB16:-0.824171106212;CDX1,2,4:-0.836251098533;NFY{A,B,C}:-0.842110295979;RORA:-0.851946661855;RFX2..5_RFXANK_RFXAP:-0.852130654674;PAX3,7:-0.884694001063;FOXM1:-0.888199134174;ZEB1:-0.920935652831;PDX1:-0.947155812212;ATF4:-0.957604219089;PITX1..3:-0.961701273351;POU1F1:-0.975641802152;VSX1,2:-1.12415433067;FOXP1:-1.19641959297;LMO2:-1.22003317283;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.33666713444;RBPJ:-1.33990092422;CUX2:-1.34423370995;MYOD1:-1.36044630942;ALX1:-1.41815350434;PBX1:-1.53485414488;POU2F1..3:-1.92025608719
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11329-117E6;search_select_hide=table117:FF:11329-117E6
}}
}}

Latest revision as of 17:52, 4 June 2020

Name:Preadipocyte - omental, donor2
Species:Human (Homo sapiens)
Library ID:CNhs11902
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueomentum
dev stage24 years old adult
sexfemale
age24
cell typepreadipocyte
cell lineNA
companyZenbio
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberN/A
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005229
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11902 CAGE DRX008410 DRR009282
Accession ID Hg19

Library idBAMCTSS
CNhs11902 DRZ000707 DRZ002092
Accession ID Hg38

Library idBAMCTSS
CNhs11902 DRZ012057 DRZ013442
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005229
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10008.CGTACG sRNA-Seq DRX037127 DRR041493
Accession ID Hg19

Library idBAMCTSS
SRhi10008.CGTACG DRZ007135


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.165
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.884
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0708
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0186
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.306
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.19
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.119
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.306
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0.61
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.571
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.179
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.661
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0057
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.328
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.179
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.179
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.484
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.355
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.614
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.306
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.707
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.846
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11902

Jaspar motifP-value
MA0002.20.388
MA0003.10.452
MA0004.10.0589
MA0006.10.127
MA0007.10.987
MA0009.10.23
MA0014.10.231
MA0017.10.189
MA0018.27.27275e-5
MA0019.10.368
MA0024.14.82981e-6
MA0025.10.0119
MA0027.10.54
MA0028.10.0027
MA0029.10.617
MA0030.10.718
MA0031.10.746
MA0035.20.0425
MA0038.10.398
MA0039.20.0316
MA0040.10.134
MA0041.10.462
MA0042.10.505
MA0043.15.98475e-4
MA0046.10.441
MA0047.20.531
MA0048.10.458
MA0050.12.28252e-4
MA0051.10.0792
MA0052.10.888
MA0055.10.661
MA0057.10.397
MA0058.10.0332
MA0059.10.132
MA0060.18.19754e-6
MA0061.10.00355
MA0062.21.89351e-7
MA0065.20.0688
MA0066.10.782
MA0067.10.0545
MA0068.10.671
MA0069.10.0136
MA0070.10.866
MA0071.10.606
MA0072.10.814
MA0073.10.721
MA0074.10.748
MA0076.10.00212
MA0077.10.848
MA0078.10.909
MA0079.20.973
MA0080.22.81803e-5
MA0081.10.0504
MA0083.10.0069
MA0084.10.552
MA0087.10.619
MA0088.10.319
MA0090.11.10331e-6
MA0091.10.0843
MA0092.10.0202
MA0093.10.0636
MA0099.20.00862
MA0100.10.845
MA0101.15.18962e-5
MA0102.20.206
MA0103.11.22714e-4
MA0104.26.274e-4
MA0105.10.0127
MA0106.10.252
MA0107.14.77824e-4
MA0108.20.0129
MA0111.10.768
MA0112.20.0485
MA0113.10.333
MA0114.10.141
MA0115.10.0229
MA0116.10.714
MA0117.10.242
MA0119.10.93
MA0122.10.956
MA0124.10.712
MA0125.10.991
MA0131.10.205
MA0135.10.221
MA0136.11.37187e-7
MA0137.20.77
MA0138.20.521
MA0139.10.35
MA0140.10.565
MA0141.10.204
MA0142.10.615
MA0143.10.468
MA0144.10.657
MA0145.10.0708
MA0146.10.228
MA0147.10.00303
MA0148.10.868
MA0149.10.687
MA0150.10.0614
MA0152.10.00381
MA0153.10.933
MA0154.10.762
MA0155.10.14
MA0156.11.19366e-5
MA0157.10.952
MA0159.10.212
MA0160.10.0755
MA0162.10.116
MA0163.10.812
MA0164.10.721
MA0258.10.816
MA0259.10.0924



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11902

Novel motifP-value
10.43
100.433
1000.352
1010.34
1020.0648
1030.514
1040.865
1050.162
1060.485
1070.191
1080.488
1090.271
110.334
1100.747
1110.871
1120.993
1130.629
1140.368
1150.126
1160.484
1170.0677
1180.0707
1190.404
120.121
1200.862
1210.747
1220.63
1230.0012
1240.639
1250.369
1260.816
1270.397
1280.7
1290.571
130.323
1300.543
1310.408
1320.481
1330.948
1340.212
1350.108
1360.409
1370.916
1380.859
1390.906
140.384
1400.744
1410.302
1420.913
1430.929
1440.933
1450.833
1460.841
1470.0891
1480.184
1490.00187
150.885
1500.986
1510.884
1520.0175
1530.247
1540.758
1550.00348
1560.639
1570.28
1580.0202
1590.773
160.0594
1600.735
1610.0453
1620.657
1630.43
1640.7
1650.813
1660.408
1670.365
1680.746
1690.126
170.796
180.203
190.0341
20.592
200.17
210.39
220.473
230.0904
240.214
250.346
260.547
270.563
280.226
290.232
30.932
300.156
310.851
324.90261e-11
330.359
340.67
350.449
360.129
370.872
380.466
390.292
40.655
400.438
410.767
420.505
430.904
440.556
450.623
460.895
470.388
480.371
490.974
50.469
500.888
510.842
520.498
530.0712
540.631
550.118
560.501
570.791
580.159
590.651
60.712
600.997
610.107
620.434
630.855
640.274
650.925
660.474
670.902
680.796
690.577
70.28
700.753
710.948
720.898
730.0521
740.438
750.389
760.13
770.143
780.0869
790.0244
80.908
800.87
810.572
820.757
830.906
840.0575
850.0493
860.584
870.814
880.664
890.46
90.229
900.92
910.692
920.238
930.44
940.768
950.461
960.232
970.209
980.389
990.0396



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11902


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002334 (preadipocyte)
0002579 (omentum preadipocyte)

UBERON: Anatomy
0000468 (multi-cellular organism)
0003688 (omentum)
0002100 (trunk)
0002384 (connective tissue)
0000479 (tissue)
0000064 (organ part)
0000466 (immaterial anatomical entity)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0004457 (cavity lining)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004923 (organ component layer)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002323 (body cavity)
0000042 (serous membrane)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002417 (abdominal segment of trunk)
0002358 (peritoneum)
0000916 (abdomen)
0003684 (abdominal cavity)
0001178 (visceral peritoneum)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000137 (human preadipocyte sample)
0000140 (human omentum preadipocyte sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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