FF:11329-117E6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005229 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005229 | ||
|accession_numbers=CAGE;DRX008410;DRR009282;DRZ000707;DRZ002092;DRZ012057;DRZ013442 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037127;DRR041493;DRZ007135 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0003688,UBERON:0002100,UBERON:0002384,UBERON:0000479,UBERON:0000064,UBERON:0000466,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0004457,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0004923,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002323,UBERON:0000042,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002417,UBERON:0002358,UBERON:0000916,UBERON:0003684,UBERON:0001178 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002334,CL:0002579 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000137,FF:0000140 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520omental%252c%2520donor2.CNhs11902.11329-117E6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520omental%252c%2520donor2.CNhs11902.11329-117E6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520omental%252c%2520donor2.CNhs11902.11329-117E6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520omental%252c%2520donor2.CNhs11902.11329-117E6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520omental%252c%2520donor2.CNhs11902.11329-117E6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11329-117E6 | |id=FF:11329-117E6 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000140 | ||
|is_obsolete= | |||
|library_id=CNhs11902 | |||
|library_id_phase_based=2:CNhs11902 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11329 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10008.CGTACG.11329 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11329 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10008.CGTACG.11329 | |||
|name=Preadipocyte - omental, donor2 | |name=Preadipocyte - omental, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11902,LSID834,release010,COMPLETED | |profile_hcage=CNhs11902,LSID834,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10008,,, | |profile_srnaseq=SRhi10008,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.243680790729933,0,0.129165522610229,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0.306084857468188,0,0.076937990043092,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.089733847823063,0,0,-0.0584468268118252,-0.121463554872805,0,0.306084857468188,0,0,0.0814323444084201,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105625816485699,0,0,0,0.0781030811134878,0.381861117400977,0,0,0,0,0,0 | |||
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| |||
|rna_box=117 | |rna_box=117 | ||
|rna_catalog_number=N/A | |rna_catalog_number=N/A | ||
| Line 54: | Line 80: | ||
|rna_rin= | |rna_rin= | ||
|rna_sample_type=total RNA | |rna_sample_type=total RNA | ||
|rna_tube_id= | |rna_tube_id=1.17E+08 | ||
|rna_weight_ug=9.5 | |rna_weight_ug=9.5 | ||
|rnaseq_library_id=SRhi10008.CGTACG | |||
|sample_age=24 | |sample_age=24 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=F-OP-F | |sample_cell_catalog=F-OP-F | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.24115299727863e-220!GO:0005737;cytoplasm;1.77282462701232e-178!GO:0043226;organelle;2.34625012181188e-146!GO:0043229;intracellular organelle;4.21935241739241e-146!GO:0043231;intracellular membrane-bound organelle;8.63332521283882e-145!GO:0043227;membrane-bound organelle;1.71797161434806e-144!GO:0044444;cytoplasmic part;2.00177199355071e-137!GO:0044422;organelle part;3.877035606312e-111!GO:0044446;intracellular organelle part;6.86636939062356e-110!GO:0005515;protein binding;1.87410477772113e-74!GO:0032991;macromolecular complex;1.90254847137762e-72!GO:0044238;primary metabolic process;1.65652160182256e-65!GO:0044237;cellular metabolic process;4.48142297396314e-65!GO:0030529;ribonucleoprotein complex;3.3216734503971e-61!GO:0043170;macromolecule metabolic process;3.93525832457133e-59!GO:0005739;mitochondrion;2.69828319247735e-54!GO:0043233;organelle lumen;2.69828319247735e-54!GO:0031974;membrane-enclosed lumen;2.69828319247735e-54!GO:0031090;organelle membrane;6.39599375313549e-52!GO:0044428;nuclear part;1.15155937317828e-49!GO:0003723;RNA binding;8.58727656366308e-46!GO:0019538;protein metabolic process;2.59911132908224e-45!GO:0016043;cellular component organization and biogenesis;1.21685322724741e-42!GO:0015031;protein transport;4.23298268643875e-42!GO:0033036;macromolecule localization;2.60845467858023e-41!GO:0044260;cellular macromolecule metabolic process;3.55610467681817e-40!GO:0005634;nucleus;6.91614770743664e-40!GO:0045184;establishment of protein localization;4.07152914560238e-39!GO:0044267;cellular protein metabolic process;7.60492209175087e-39!GO:0008104;protein localization;1.0604659003161e-38!GO:0005840;ribosome;2.1777192959842e-37!GO:0043234;protein complex;3.76388912711884e-37!GO:0006412;translation;2.83293343361744e-36!GO:0044429;mitochondrial part;7.08953622704317e-36!GO:0009058;biosynthetic process;3.51732070128749e-34!GO:0005829;cytosol;2.58390060109733e-33!GO:0046907;intracellular transport;3.81527268308204e-33!GO:0031967;organelle envelope;5.71234106616295e-33!GO:0031975;envelope;1.27534128858349e-32!GO:0003735;structural constituent of ribosome;2.06171966173664e-32!GO:0006396;RNA processing;5.95914898132478e-32!GO:0009059;macromolecule biosynthetic process;7.01778723220302e-31!GO:0031981;nuclear lumen;2.24678545237839e-30!GO:0044249;cellular biosynthetic process;1.04972050983769e-29!GO:0016071;mRNA metabolic process;4.95194912746653e-29!GO:0006886;intracellular protein transport;2.49177836024455e-28!GO:0043283;biopolymer metabolic process;1.19934380754863e-27!GO:0033279;ribosomal subunit;2.34877881301011e-27!GO:0005783;endoplasmic reticulum;3.9521195260662e-26!GO:0008380;RNA splicing;6.37695586832201e-26!GO:0006397;mRNA processing;1.10660702218116e-24!GO:0005740;mitochondrial envelope;1.36965554921915e-24!GO:0010467;gene expression;2.06991673326371e-24!GO:0065003;macromolecular complex assembly;2.00467265021767e-23!GO:0031966;mitochondrial membrane;2.13421154314127e-23!GO:0019866;organelle inner membrane;2.52939915162702e-22!GO:0012505;endomembrane system;2.82848648370437e-22!GO:0005743;mitochondrial inner membrane;2.05795740498187e-21!GO:0022607;cellular component assembly;4.13821035910601e-21!GO:0006996;organelle organization and biogenesis;1.01201031904774e-20!GO:0051649;establishment of cellular localization;1.55325771992184e-20!GO:0051641;cellular localization;2.65557045219099e-20!GO:0006119;oxidative phosphorylation;5.28032550137509e-20!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.9413770225414e-20!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.91134439417281e-20!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.64162464297348e-20!GO:0005654;nucleoplasm;1.66244821249652e-19!GO:0044432;endoplasmic reticulum part;1.81828946608998e-19!GO:0005794;Golgi apparatus;2.52380056828714e-19!GO:0006457;protein folding;4.92054746087697e-19!GO:0043228;non-membrane-bound organelle;1.16546906512934e-18!GO:0043232;intracellular non-membrane-bound organelle;1.16546906512934e-18!GO:0048770;pigment granule;1.5767043751391e-18!GO:0042470;melanosome;1.5767043751391e-18!GO:0005681;spliceosome;2.6365216131144e-18!GO:0044455;mitochondrial membrane part;2.96599816270074e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.26520216307385e-16!GO:0016462;pyrophosphatase activity;1.41069218940491e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;2.1159276186823e-16!GO:0044451;nucleoplasm part;4.06539372318996e-16!GO:0048193;Golgi vesicle transport;4.17615526999313e-16!GO:0017111;nucleoside-triphosphatase activity;4.89586279072574e-16!GO:0044445;cytosolic part;1.11265110781554e-15!GO:0008134;transcription factor binding;1.38983167596615e-15!GO:0006512;ubiquitin cycle;2.80219379578604e-15!GO:0005746;mitochondrial respiratory chain;5.31121215442263e-15!GO:0016874;ligase activity;8.60516520514767e-15!GO:0000166;nucleotide binding;8.91262117081806e-15!GO:0051186;cofactor metabolic process;9.09575508538556e-15!GO:0016192;vesicle-mediated transport;1.3810341261194e-14!GO:0006605;protein targeting;2.02275568376657e-14!GO:0022618;protein-RNA complex assembly;2.13656284575001e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;2.9855620239252e-14!GO:0015934;large ribosomal subunit;3.25817103258175e-14!GO:0044265;cellular macromolecule catabolic process;4.23881371665512e-14!GO:0044257;cellular protein catabolic process;5.48396556750365e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.8443473155231e-14!GO:0015935;small ribosomal subunit;6.27257436868453e-14!GO:0019941;modification-dependent protein catabolic process;6.34026409310905e-14!GO:0043632;modification-dependent macromolecule catabolic process;6.34026409310905e-14!GO:0051082;unfolded protein binding;7.59044552705478e-14!GO:0031980;mitochondrial lumen;7.59044552705478e-14!GO:0005759;mitochondrial matrix;7.59044552705478e-14!GO:0006511;ubiquitin-dependent protein catabolic process;9.08835693386563e-14!GO:0043285;biopolymer catabolic process;1.29100599190854e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.7921533326134e-13!GO:0000502;proteasome complex (sensu Eukaryota);2.51187353829246e-13!GO:0050136;NADH dehydrogenase (quinone) activity;5.3264163516818e-13!GO:0003954;NADH dehydrogenase activity;5.3264163516818e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.3264163516818e-13!GO:0005789;endoplasmic reticulum membrane;6.25692472953677e-13!GO:0030163;protein catabolic process;2.19225423274879e-12!GO:0008135;translation factor activity, nucleic acid binding;2.4222991741845e-12!GO:0009057;macromolecule catabolic process;2.4222991741845e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.00573301814057e-12!GO:0009055;electron carrier activity;8.68059916142067e-12!GO:0044248;cellular catabolic process;9.28367992348612e-12!GO:0043412;biopolymer modification;1.0617724930767e-11!GO:0006732;coenzyme metabolic process;1.31261581945225e-11!GO:0005761;mitochondrial ribosome;2.05081285097109e-11!GO:0000313;organellar ribosome;2.05081285097109e-11!GO:0005730;nucleolus;2.06534312864326e-11!GO:0042775;organelle ATP synthesis coupled electron transport;2.1911518708735e-11!GO:0042773;ATP synthesis coupled electron transport;2.1911518708735e-11!GO:0005793;ER-Golgi intermediate compartment;2.36670545362796e-11!GO:0030964;NADH dehydrogenase complex (quinone);2.36670545362796e-11!GO:0045271;respiratory chain complex I;2.36670545362796e-11!GO:0005747;mitochondrial respiratory chain complex I;2.36670545362796e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.10985532915549e-11!GO:0006464;protein modification process;9.14489852365921e-11!GO:0017076;purine nucleotide binding;1.05385870351012e-10!GO:0006259;DNA metabolic process;1.24531386011243e-10!GO:0032553;ribonucleotide binding;1.25228546551983e-10!GO:0032555;purine ribonucleotide binding;1.25228546551983e-10!GO:0003712;transcription cofactor activity;1.62687519918466e-10!GO:0012501;programmed cell death;2.64397522759521e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.01650194893608e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.47665547508688e-10!GO:0006915;apoptosis;8.06067319474762e-10!GO:0006413;translational initiation;1.02074147674267e-09!GO:0019787;small conjugating protein ligase activity;1.44828950497614e-09!GO:0003743;translation initiation factor activity;1.53480315521894e-09!GO:0006446;regulation of translational initiation;1.54730983175391e-09!GO:0008639;small protein conjugating enzyme activity;1.83583233107029e-09!GO:0048523;negative regulation of cellular process;1.97695650235567e-09!GO:0008219;cell death;1.97695650235567e-09!GO:0016265;death;1.97695650235567e-09!GO:0008565;protein transporter activity;2.12444000130312e-09!GO:0009259;ribonucleotide metabolic process;2.48754063913547e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.60506626047523e-09!GO:0007049;cell cycle;2.71037570550938e-09!GO:0005788;endoplasmic reticulum lumen;3.02078997581147e-09!GO:0004842;ubiquitin-protein ligase activity;3.02395676982304e-09!GO:0005635;nuclear envelope;3.59751397947291e-09!GO:0006888;ER to Golgi vesicle-mediated transport;3.86372084054791e-09!GO:0016070;RNA metabolic process;4.54733355813948e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.76778448927418e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;4.84870859946313e-09!GO:0000375;RNA splicing, via transesterification reactions;4.84870859946313e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.84870859946313e-09!GO:0006913;nucleocytoplasmic transport;5.60891972081379e-09!GO:0031965;nuclear membrane;6.15863905412456e-09!GO:0043687;post-translational protein modification;6.20798078090058e-09!GO:0006163;purine nucleotide metabolic process;7.55263160859585e-09!GO:0009150;purine ribonucleotide metabolic process;7.76738960222811e-09!GO:0005768;endosome;9.78820375799751e-09!GO:0051169;nuclear transport;1.07124695972707e-08!GO:0003676;nucleic acid binding;1.2009663322862e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.26193307144694e-08!GO:0006461;protein complex assembly;1.42713681074818e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.43390956719701e-08!GO:0016881;acid-amino acid ligase activity;1.54559254148256e-08!GO:0044431;Golgi apparatus part;1.67212702238348e-08!GO:0030120;vesicle coat;2.10348720476815e-08!GO:0030662;coated vesicle membrane;2.10348720476815e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.17511373254207e-08!GO:0009144;purine nucleoside triphosphate metabolic process;2.17511373254207e-08!GO:0009141;nucleoside triphosphate metabolic process;2.49161832440272e-08!GO:0009260;ribonucleotide biosynthetic process;3.44561012600517e-08!GO:0016023;cytoplasmic membrane-bound vesicle;3.4556443426078e-08!GO:0009152;purine ribonucleotide biosynthetic process;3.45859051823335e-08!GO:0006164;purine nucleotide biosynthetic process;3.45859051823335e-08!GO:0016604;nuclear body;3.54838430465085e-08!GO:0031988;membrane-bound vesicle;3.7817227047398e-08!GO:0016491;oxidoreductase activity;4.98474333738702e-08!GO:0015986;ATP synthesis coupled proton transport;5.50928189578339e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.50928189578339e-08!GO:0042623;ATPase activity, coupled;5.52432283200866e-08!GO:0005524;ATP binding;6.29859038783964e-08!GO:0009142;nucleoside triphosphate biosynthetic process;6.56692636837113e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.56692636837113e-08!GO:0009060;aerobic respiration;7.6601923323756e-08!GO:0016887;ATPase activity;8.16875036246124e-08!GO:0048519;negative regulation of biological process;9.0797685118511e-08!GO:0032559;adenyl ribonucleotide binding;9.48224325790818e-08!GO:0030554;adenyl nucleotide binding;9.89779930402902e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.89779930402902e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.89779930402902e-08!GO:0003924;GTPase activity;1.10808901214904e-07!GO:0017038;protein import;1.21590563317482e-07!GO:0046034;ATP metabolic process;1.43747170637254e-07!GO:0005773;vacuole;1.45924352900646e-07!GO:0045333;cellular respiration;1.53277714371688e-07!GO:0044453;nuclear membrane part;1.73821901867627e-07!GO:0048475;coated membrane;1.99044229338488e-07!GO:0030117;membrane coat;1.99044229338488e-07!GO:0019829;cation-transporting ATPase activity;2.02186127268314e-07!GO:0006974;response to DNA damage stimulus;2.08015678418629e-07!GO:0008361;regulation of cell size;2.68187152147198e-07!GO:0051246;regulation of protein metabolic process;3.17835865502165e-07!GO:0009056;catabolic process;3.32476218343195e-07!GO:0015078;hydrogen ion transmembrane transporter activity;3.35432500241681e-07!GO:0031982;vesicle;3.77046185848939e-07!GO:0031410;cytoplasmic vesicle;4.24086170093044e-07!GO:0003714;transcription corepressor activity;4.36310156989773e-07!GO:0006366;transcription from RNA polymerase II promoter;4.364037671775e-07!GO:0016049;cell growth;5.35588663309935e-07!GO:0006754;ATP biosynthetic process;5.75829281741344e-07!GO:0006753;nucleoside phosphate metabolic process;5.75829281741344e-07!GO:0005798;Golgi-associated vesicle;6.83389569396206e-07!GO:0030036;actin cytoskeleton organization and biogenesis;7.25198530516921e-07!GO:0016607;nuclear speck;7.71258547799671e-07!GO:0051188;cofactor biosynthetic process;9.92743201540165e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.06757353296881e-06!GO:0022402;cell cycle process;1.13808443817222e-06!GO:0006099;tricarboxylic acid cycle;1.54259218688387e-06!GO:0046356;acetyl-CoA catabolic process;1.54259218688387e-06!GO:0042254;ribosome biogenesis and assembly;1.77001400437356e-06!GO:0051187;cofactor catabolic process;1.82435640851447e-06!GO:0032446;protein modification by small protein conjugation;1.88384538975813e-06!GO:0000323;lytic vacuole;1.95381498290083e-06!GO:0005764;lysosome;1.95381498290083e-06!GO:0051789;response to protein stimulus;2.12509547273997e-06!GO:0006986;response to unfolded protein;2.12509547273997e-06!GO:0016567;protein ubiquitination;2.19057755873292e-06!GO:0031252;leading edge;2.20881627092231e-06!GO:0043069;negative regulation of programmed cell death;2.2579594346018e-06!GO:0009109;coenzyme catabolic process;2.30174669538917e-06!GO:0044440;endosomal part;2.4038990660613e-06!GO:0010008;endosome membrane;2.4038990660613e-06!GO:0009719;response to endogenous stimulus;2.52463891151006e-06!GO:0000139;Golgi membrane;2.61523399909072e-06!GO:0008654;phospholipid biosynthetic process;2.72006094913726e-06!GO:0007005;mitochondrion organization and biogenesis;2.82875675088468e-06!GO:0001558;regulation of cell growth;3.49879545350253e-06!GO:0043067;regulation of programmed cell death;3.73062940289104e-06!GO:0030133;transport vesicle;3.74815305008287e-06!GO:0050794;regulation of cellular process;4.05819752881573e-06!GO:0006084;acetyl-CoA metabolic process;4.105455231945e-06!GO:0065002;intracellular protein transport across a membrane;4.11406550476716e-06!GO:0016469;proton-transporting two-sector ATPase complex;4.33745101144793e-06!GO:0043066;negative regulation of apoptosis;5.35244355769714e-06!GO:0030029;actin filament-based process;6.01057939553754e-06!GO:0042981;regulation of apoptosis;6.04162311883865e-06!GO:0016564;transcription repressor activity;6.39141980974377e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.07322417681895e-06!GO:0004812;aminoacyl-tRNA ligase activity;7.07322417681895e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.07322417681895e-06!GO:0005643;nuclear pore;7.19881848063323e-06!GO:0043038;amino acid activation;7.23848776543849e-06!GO:0006418;tRNA aminoacylation for protein translation;7.23848776543849e-06!GO:0043039;tRNA aminoacylation;7.23848776543849e-06!GO:0005770;late endosome;7.63971128195784e-06!GO:0016853;isomerase activity;7.91884286436461e-06!GO:0006399;tRNA metabolic process;7.9906464505384e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.68078853697003e-06!GO:0006613;cotranslational protein targeting to membrane;9.77965205054478e-06!GO:0006752;group transfer coenzyme metabolic process;9.78706307666923e-06!GO:0000151;ubiquitin ligase complex;1.05770328928932e-05!GO:0009117;nucleotide metabolic process;1.08698689787312e-05!GO:0006091;generation of precursor metabolites and energy;1.19891210825411e-05!GO:0005667;transcription factor complex;1.25227731340112e-05!GO:0008026;ATP-dependent helicase activity;1.253015091441e-05!GO:0051170;nuclear import;1.30384552644589e-05!GO:0051726;regulation of cell cycle;1.37835572186164e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.5028561756916e-05!GO:0006281;DNA repair;1.56662401909964e-05!GO:0000074;regulation of progression through cell cycle;1.61037385402031e-05!GO:0006606;protein import into nucleus;1.7449330429956e-05!GO:0004386;helicase activity;1.76602693575828e-05!GO:0000278;mitotic cell cycle;2.11179656083072e-05!GO:0006916;anti-apoptosis;2.11579612427101e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.34099778898853e-05!GO:0005525;GTP binding;2.42231455273637e-05!GO:0009108;coenzyme biosynthetic process;3.21784050335993e-05!GO:0045259;proton-transporting ATP synthase complex;3.23404268642788e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.28283052642949e-05!GO:0006793;phosphorus metabolic process;3.36239447339021e-05!GO:0006796;phosphate metabolic process;3.36239447339021e-05!GO:0005905;coated pit;3.54380050054072e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.74666454962339e-05!GO:0030867;rough endoplasmic reticulum membrane;4.20899024835051e-05!GO:0015980;energy derivation by oxidation of organic compounds;4.35210811314016e-05!GO:0031324;negative regulation of cellular metabolic process;4.60828991614964e-05!GO:0016787;hydrolase activity;5.35428215950255e-05!GO:0005791;rough endoplasmic reticulum;5.35428215950255e-05!GO:0044262;cellular carbohydrate metabolic process;5.43040606480865e-05!GO:0046930;pore complex;5.43040606480865e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;5.88498868909028e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;6.31378307752564e-05!GO:0045454;cell redox homeostasis;6.49529485319053e-05!GO:0003697;single-stranded DNA binding;6.92929043908759e-05!GO:0050789;regulation of biological process;8.24927500711937e-05!GO:0006403;RNA localization;8.43743022684786e-05!GO:0050657;nucleic acid transport;8.52333675914301e-05!GO:0051236;establishment of RNA localization;8.52333675914301e-05!GO:0050658;RNA transport;8.52333675914301e-05!GO:0008092;cytoskeletal protein binding;8.54103472869374e-05!GO:0016859;cis-trans isomerase activity;9.78185016002108e-05!GO:0016310;phosphorylation;9.82414094645433e-05!GO:0045786;negative regulation of progression through cell cycle;0.000104926922136235!GO:0030532;small nuclear ribonucleoprotein complex;0.000105625966237395!GO:0006612;protein targeting to membrane;0.000114160950703292!GO:0005769;early endosome;0.000116492369223304!GO:0004298;threonine endopeptidase activity;0.000117626582057133!GO:0033116;ER-Golgi intermediate compartment membrane;0.000117626582057133!GO:0000245;spliceosome assembly;0.00012000214119649!GO:0003724;RNA helicase activity;0.000120273598369955!GO:0007010;cytoskeleton organization and biogenesis;0.000126089812367469!GO:0032561;guanyl ribonucleotide binding;0.000127875849808788!GO:0019001;guanyl nucleotide binding;0.000127875849808788!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000138903947333397!GO:0043566;structure-specific DNA binding;0.000149621808330169!GO:0043623;cellular protein complex assembly;0.000174082354603884!GO:0019867;outer membrane;0.000175888092430562!GO:0046474;glycerophospholipid biosynthetic process;0.000182989312421277!GO:0015630;microtubule cytoskeleton;0.000185313561504474!GO:0005813;centrosome;0.000216737454881769!GO:0009892;negative regulation of metabolic process;0.000217863077496878!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000237818546895046!GO:0040008;regulation of growth;0.000242321026208084!GO:0031968;organelle outer membrane;0.000277862429080643!GO:0030663;COPI coated vesicle membrane;0.000279333567934298!GO:0030126;COPI vesicle coat;0.000279333567934298!GO:0004576;oligosaccharyl transferase activity;0.000292086939257354!GO:0005048;signal sequence binding;0.00029625736850169!GO:0003713;transcription coactivator activity;0.000303035295432636!GO:0005885;Arp2/3 protein complex;0.000369042594108761!GO:0005815;microtubule organizing center;0.000410968958327796!GO:0005762;mitochondrial large ribosomal subunit;0.000416934267752669!GO:0000315;organellar large ribosomal subunit;0.000416934267752669!GO:0008250;oligosaccharyl transferase complex;0.0004178949803084!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000450175239060932!GO:0016044;membrane organization and biogenesis;0.000515350701358659!GO:0006364;rRNA processing;0.000530551993343279!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00053142430158491!GO:0015399;primary active transmembrane transporter activity;0.00053142430158491!GO:0016740;transferase activity;0.000532793046495469!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000556061419660603!GO:0008610;lipid biosynthetic process;0.000572523822386375!GO:0030137;COPI-coated vesicle;0.000587965734643959!GO:0016563;transcription activator activity;0.000684027095409331!GO:0043021;ribonucleoprotein binding;0.000702950417224731!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00078649982298391!GO:0043284;biopolymer biosynthetic process;0.000797082318039273!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000806353675523323!GO:0016072;rRNA metabolic process;0.000884324867546285!GO:0019899;enzyme binding;0.000960781230649671!GO:0006260;DNA replication;0.00101519583769486!GO:0048522;positive regulation of cellular process;0.00102608607659866!GO:0051920;peroxiredoxin activity;0.00107308590933378!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00107308590933378!GO:0007050;cell cycle arrest;0.00108718543135536!GO:0030658;transport vesicle membrane;0.00108748136131462!GO:0030027;lamellipodium;0.0011562162235136!GO:0046467;membrane lipid biosynthetic process;0.00120122226051711!GO:0065004;protein-DNA complex assembly;0.00120244867290977!GO:0051028;mRNA transport;0.00125170685847459!GO:0005741;mitochondrial outer membrane;0.0012596629422466!GO:0048471;perinuclear region of cytoplasm;0.00136164879131583!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.001418569607705!GO:0016779;nucleotidyltransferase activity;0.00143091306779338!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00145093971419651!GO:0006323;DNA packaging;0.0014910446575854!GO:0051329;interphase of mitotic cell cycle;0.00150420972279985!GO:0046489;phosphoinositide biosynthetic process;0.00150443901592701!GO:0006650;glycerophospholipid metabolic process;0.00159932056957414!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00159932056957414!GO:0030176;integral to endoplasmic reticulum membrane;0.00166750672529926!GO:0006979;response to oxidative stress;0.001674749756399!GO:0044420;extracellular matrix part;0.00168259757145406!GO:0051325;interphase;0.00178021956419853!GO:0000314;organellar small ribosomal subunit;0.00178850588809256!GO:0005763;mitochondrial small ribosomal subunit;0.00178850588809256!GO:0008186;RNA-dependent ATPase activity;0.00178850588809256!GO:0018196;peptidyl-asparagine modification;0.00186050416570208!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00186050416570208!GO:0006891;intra-Golgi vesicle-mediated transport;0.00198644569387078!GO:0030659;cytoplasmic vesicle membrane;0.00203966332018202!GO:0022403;cell cycle phase;0.00213207829761722!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00214028781856201!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00214366257844344!GO:0051427;hormone receptor binding;0.00216871065929118!GO:0006839;mitochondrial transport;0.00220696071636866!GO:0007243;protein kinase cascade;0.0023000639299354!GO:0015992;proton transport;0.00253194075051151!GO:0048468;cell development;0.00256171166359554!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.00259686876733563!GO:0051276;chromosome organization and biogenesis;0.00266431016260845!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00278425794703701!GO:0006818;hydrogen transport;0.00283844679417593!GO:0016481;negative regulation of transcription;0.00290307167639816!GO:0007264;small GTPase mediated signal transduction;0.00291842881618128!GO:0043492;ATPase activity, coupled to movement of substances;0.00304202863055719!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00308514257144549!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00308716019239139!GO:0003779;actin binding;0.00309176786787132!GO:0009165;nucleotide biosynthetic process;0.00315615624545326!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00328866229125673!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00328866229125673!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00333471914928064!GO:0030660;Golgi-associated vesicle membrane;0.00333803764248264!GO:0051301;cell division;0.00335705427975874!GO:0048500;signal recognition particle;0.00337395110712101!GO:0045792;negative regulation of cell size;0.00339189736984765!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00340422481357423!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00340422481357423!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00340422481357423!GO:0051168;nuclear export;0.00340422481357423!GO:0006892;post-Golgi vesicle-mediated transport;0.00344894441917506!GO:0035257;nuclear hormone receptor binding;0.00361837431436332!GO:0030134;ER to Golgi transport vesicle;0.00372053963733849!GO:0016126;sterol biosynthetic process;0.0037949068335125!GO:0006414;translational elongation;0.00382369287469763!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00389419395396027!GO:0007040;lysosome organization and biogenesis;0.00393182118622639!GO:0045045;secretory pathway;0.00394306059123841!GO:0030127;COPII vesicle coat;0.00401043090044995!GO:0012507;ER to Golgi transport vesicle membrane;0.00401043090044995!GO:0022890;inorganic cation transmembrane transporter activity;0.00405791285126382!GO:0031072;heat shock protein binding;0.00413972875623558!GO:0051128;regulation of cellular component organization and biogenesis;0.00414995650855256!GO:0016197;endosome transport;0.00423296315213333!GO:0004004;ATP-dependent RNA helicase activity;0.00439866260078505!GO:0005774;vacuolar membrane;0.0044188492142782!GO:0030308;negative regulation of cell growth;0.00455189668272392!GO:0016568;chromatin modification;0.00468388857616705!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00478816454277956!GO:0045047;protein targeting to ER;0.00478816454277956!GO:0030118;clathrin coat;0.00493384317258979!GO:0000087;M phase of mitotic cell cycle;0.00538962096099001!GO:0044433;cytoplasmic vesicle part;0.00552825932764011!GO:0048487;beta-tubulin binding;0.00554038808509171!GO:0046483;heterocycle metabolic process;0.00567157999456097!GO:0051087;chaperone binding;0.00567186550142867!GO:0001726;ruffle;0.00570255038992024!GO:0030132;clathrin coat of coated pit;0.005870858737187!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00601221692795594!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00620868287171999!GO:0006383;transcription from RNA polymerase III promoter;0.00630420677476884!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00645349100342776!GO:0031902;late endosome membrane;0.00658341518018221!GO:0005869;dynactin complex;0.00665423960703568!GO:0019843;rRNA binding;0.00681569389260359!GO:0005581;collagen;0.00684212302030988!GO:0007067;mitosis;0.0068606639319505!GO:0043681;protein import into mitochondrion;0.00705797451355573!GO:0043433;negative regulation of transcription factor activity;0.00737793010997747!GO:0006509;membrane protein ectodomain proteolysis;0.00737793010997747!GO:0033619;membrane protein proteolysis;0.00737793010997747!GO:0016363;nuclear matrix;0.00753081088432441!GO:0051252;regulation of RNA metabolic process;0.00776369614962811!GO:0005583;fibrillar collagen;0.00778741510190398!GO:0065009;regulation of a molecular function;0.00794851508773511!GO:0019752;carboxylic acid metabolic process;0.00801852769833412!GO:0004177;aminopeptidase activity;0.00810560069510836!GO:0008154;actin polymerization and/or depolymerization;0.00810961492793531!GO:0007033;vacuole organization and biogenesis;0.00820789233344792!GO:0003899;DNA-directed RNA polymerase activity;0.00826532850641155!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00826532850641155!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00826532850641155!GO:0065007;biological regulation;0.0084819483595667!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00849756163639318!GO:0006082;organic acid metabolic process;0.00877631814022083!GO:0003729;mRNA binding;0.00880919463912144!GO:0017166;vinculin binding;0.00890253603792617!GO:0050811;GABA receptor binding;0.00890253603792617!GO:0007006;mitochondrial membrane organization and biogenesis;0.00900723920929963!GO:0000059;protein import into nucleus, docking;0.00917654157260013!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00920222400909282!GO:0015002;heme-copper terminal oxidase activity;0.00920222400909282!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00920222400909282!GO:0004129;cytochrome-c oxidase activity;0.00920222400909282!GO:0006402;mRNA catabolic process;0.00920222400909282!GO:0030521;androgen receptor signaling pathway;0.00920222400909282!GO:0043488;regulation of mRNA stability;0.0100199655621785!GO:0043487;regulation of RNA stability;0.0100199655621785!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0104137630646715!GO:0006626;protein targeting to mitochondrion;0.0106860852630272!GO:0012506;vesicle membrane;0.0108232267850222!GO:0044437;vacuolar part;0.0110009531398074!GO:0001527;microfibril;0.0111281176886772!GO:0008139;nuclear localization sequence binding;0.0112928872789849!GO:0007034;vacuolar transport;0.0113975116457332!GO:0006790;sulfur metabolic process;0.0114371316977751!GO:0006643;membrane lipid metabolic process;0.0115059186205347!GO:0051540;metal cluster binding;0.0115059186205347!GO:0051536;iron-sulfur cluster binding;0.0115059186205347!GO:0005520;insulin-like growth factor binding;0.0117303149722384!GO:0008312;7S RNA binding;0.0120070495991381!GO:0046519;sphingoid metabolic process;0.0123890141056969!GO:0008180;signalosome;0.0124825536130479!GO:0030384;phosphoinositide metabolic process;0.0125216613988505!GO:0005694;chromosome;0.012982654415508!GO:0006333;chromatin assembly or disassembly;0.0137483714113876!GO:0030880;RNA polymerase complex;0.0139051465495581!GO:0003690;double-stranded DNA binding;0.0151299699847254!GO:0035258;steroid hormone receptor binding;0.0152051532442752!GO:0016860;intramolecular oxidoreductase activity;0.0152051532442752!GO:0005765;lysosomal membrane;0.0157653445121874!GO:0006672;ceramide metabolic process;0.0159342430642851!GO:0006497;protein amino acid lipidation;0.0160173063079943!GO:0031901;early endosome membrane;0.0161581227018162!GO:0003711;transcription elongation regulator activity;0.0165983500753247!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0169798165191181!GO:0000209;protein polyubiquitination;0.0170618991821727!GO:0005862;muscle thin filament tropomyosin;0.0170741195027019!GO:0007160;cell-matrix adhesion;0.017142173024374!GO:0005595;collagen type XII;0.0172252086185872!GO:0019222;regulation of metabolic process;0.0176772733589079!GO:0051287;NAD binding;0.0180647432601286!GO:0032940;secretion by cell;0.0182416738992009!GO:0006635;fatty acid beta-oxidation;0.0183161929298161!GO:0003746;translation elongation factor activity;0.0183161929298161!GO:0006897;endocytosis;0.0184239432960361!GO:0010324;membrane invagination;0.0184239432960361!GO:0006118;electron transport;0.0185364512499065!GO:0031589;cell-substrate adhesion;0.0185364512499065!GO:0030518;steroid hormone receptor signaling pathway;0.0185467088447877!GO:0030125;clathrin vesicle coat;0.0188435987951486!GO:0030665;clathrin coated vesicle membrane;0.0188435987951486!GO:0045926;negative regulation of growth;0.0191482960240157!GO:0006506;GPI anchor biosynthetic process;0.0201341682025227!GO:0006354;RNA elongation;0.0202116687582889!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0205419679428231!GO:0033043;regulation of organelle organization and biogenesis;0.0205419679428231!GO:0003684;damaged DNA binding;0.0206783978510678!GO:0031418;L-ascorbic acid binding;0.0207735238915033!GO:0000082;G1/S transition of mitotic cell cycle;0.0207735238915033!GO:0030041;actin filament polymerization;0.0212897875763569!GO:0006644;phospholipid metabolic process;0.0216604992444871!GO:0048518;positive regulation of biological process;0.0217324892474019!GO:0007030;Golgi organization and biogenesis;0.0217452863378207!GO:0044255;cellular lipid metabolic process;0.0217979628681673!GO:0006984;ER-nuclear signaling pathway;0.022004633799671!GO:0006695;cholesterol biosynthetic process;0.022069883073893!GO:0033559;unsaturated fatty acid metabolic process;0.022069883073893!GO:0006636;unsaturated fatty acid biosynthetic process;0.022069883073893!GO:0008484;sulfuric ester hydrolase activity;0.022121352626871!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0221549183000058!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0221549183000058!GO:0006352;transcription initiation;0.0223861012460653!GO:0032984;macromolecular complex disassembly;0.0225762729075146!GO:0015631;tubulin binding;0.0227685455210226!GO:0007021;tubulin folding;0.0234149268130461!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0240052860141245!GO:0009967;positive regulation of signal transduction;0.0241072068022862!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0242937863439357!GO:0000049;tRNA binding;0.0247702188884415!GO:0035035;histone acetyltransferase binding;0.0250247048753798!GO:0045936;negative regulation of phosphate metabolic process;0.0252199464393838!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0252199464393838!GO:0000428;DNA-directed RNA polymerase complex;0.0252199464393838!GO:0008147;structural constituent of bone;0.0257225587351119!GO:0006740;NADPH regeneration;0.0257386414836455!GO:0006098;pentose-phosphate shunt;0.0257386414836455!GO:0006505;GPI anchor metabolic process;0.0258677455842905!GO:0031529;ruffle organization and biogenesis;0.0263492594203902!GO:0007041;lysosomal transport;0.0264032614092687!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0265199525210271!GO:0031543;peptidyl-proline dioxygenase activity;0.0265199525210271!GO:0005975;carbohydrate metabolic process;0.027029689830578!GO:0000902;cell morphogenesis;0.0270754720834543!GO:0032989;cellular structure morphogenesis;0.0270754720834543!GO:0008047;enzyme activator activity;0.02729290931663!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.02729290931663!GO:0009112;nucleobase metabolic process;0.0277029370124812!GO:0042158;lipoprotein biosynthetic process;0.0278610020470024!GO:0006289;nucleotide-excision repair;0.0279830869688473!GO:0006595;polyamine metabolic process;0.028116803590534!GO:0005665;DNA-directed RNA polymerase II, core complex;0.028327294926979!GO:0006778;porphyrin metabolic process;0.0286731488473119!GO:0033013;tetrapyrrole metabolic process;0.0286731488473119!GO:0006607;NLS-bearing substrate import into nucleus;0.0287847277983467!GO:0051101;regulation of DNA binding;0.0290128296625529!GO:0016272;prefoldin complex;0.029282213342995!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0302480294192888!GO:0030119;AP-type membrane coat adaptor complex;0.0302480294192888!GO:0042802;identical protein binding;0.0305220147260794!GO:0005832;chaperonin-containing T-complex;0.0308213680620897!GO:0006302;double-strand break repair;0.0314384324696152!GO:0006693;prostaglandin metabolic process;0.0325906444128081!GO:0006692;prostanoid metabolic process;0.0325906444128081!GO:0050662;coenzyme binding;0.0331582659047194!GO:0000096;sulfur amino acid metabolic process;0.0336657182136086!GO:0016251;general RNA polymerase II transcription factor activity;0.0344058070561803!GO:0050681;androgen receptor binding;0.0344058070561803!GO:0030433;ER-associated protein catabolic process;0.0349952330354113!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0349952330354113!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0350436277124329!GO:0019798;procollagen-proline dioxygenase activity;0.0352177531132311!GO:0030140;trans-Golgi network transport vesicle;0.0358483745414987!GO:0000287;magnesium ion binding;0.0360299257723113!GO:0000339;RNA cap binding;0.036085771033619!GO:0051098;regulation of binding;0.0363295458336624!GO:0031124;mRNA 3'-end processing;0.0370913454526436!GO:0045639;positive regulation of myeloid cell differentiation;0.0371834912926898!GO:0006417;regulation of translation;0.0375810076351238!GO:0043022;ribosome binding;0.0376397732765004!GO:0030145;manganese ion binding;0.0380551846742746!GO:0006401;RNA catabolic process;0.038172273760798!GO:0051539;4 iron, 4 sulfur cluster binding;0.0385990748198882!GO:0022408;negative regulation of cell-cell adhesion;0.0388815176529047!GO:0043241;protein complex disassembly;0.039225855978129!GO:0043624;cellular protein complex disassembly;0.0393838191208634!GO:0031625;ubiquitin protein ligase binding;0.0394493788805443!GO:0044427;chromosomal part;0.0398998420036902!GO:0006611;protein export from nucleus;0.0408868155448396!GO:0008632;apoptotic program;0.0414415778087473!GO:0005777;peroxisome;0.0422827362195956!GO:0042579;microbody;0.0422827362195956!GO:0045892;negative regulation of transcription, DNA-dependent;0.0433421919184869!GO:0001725;stress fiber;0.0433421919184869!GO:0032432;actin filament bundle;0.0433421919184869!GO:0048144;fibroblast proliferation;0.0434319241188702!GO:0048145;regulation of fibroblast proliferation;0.0434319241188702!GO:0008320;protein transmembrane transporter activity;0.0436565403131578!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0438220250249741!GO:0051271;negative regulation of cell motility;0.0440278082667541!GO:0005586;collagen type III;0.044480396369979!GO:0000030;mannosyltransferase activity;0.0450666361040642!GO:0033673;negative regulation of kinase activity;0.0451177961330315!GO:0006469;negative regulation of protein kinase activity;0.0451177961330315!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0454798575844789!GO:0005801;cis-Golgi network;0.0459632886436816!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.046026855188696!GO:0045893;positive regulation of transcription, DNA-dependent;0.046026855188696!GO:0030032;lamellipodium biogenesis;0.0460991450553873!GO:0005784;translocon complex;0.0461288033122747!GO:0016408;C-acyltransferase activity;0.0463237334243146!GO:0042585;germinal vesicle;0.0467272577250754!GO:0042168;heme metabolic process;0.0477855478599133!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0482745843106502!GO:0030131;clathrin adaptor complex;0.0484102469404915!GO:0008022;protein C-terminus binding;0.0484460194154298!GO:0005819;spindle;0.0484854619612597!GO:0005684;U2-dependent spliceosome;0.0484854619612597!GO:0051348;negative regulation of transferase activity;0.0489003225714433!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0489003225714433!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0489003225714433!GO:0003756;protein disulfide isomerase activity;0.0489793508883326!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0489793508883326!GO:0006334;nucleosome assembly;0.0494270600835032!GO:0030503;regulation of cell redox homeostasis;0.0496253605030033!GO:0006749;glutathione metabolic process;0.0496358115449149 | |||
|sample_id=11329 | |sample_id=11329 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=omentum | |sample_tissue=omentum | ||
|top_motifs=HOX{A6,A7,B6,B7}:1.92545557997;MAFB:1.83524311417;GZF1:1.80072212628;HES1:1.61151380873;TEAD1:1.51574510646;NKX3-1:1.49760314082;ESR1:1.47702032951;XBP1:1.46875300694;SMAD1..7,9:1.44397168075;HMGA1,2:1.42799538341;MYBL2:1.4245513539;ALX4:1.4068173243;GLI1..3:1.40502596015;EVI1:1.39569505278;TP53:1.3942863528;IKZF1:1.35306959954;SRF:1.29516485114;ZNF238:1.29303365066;TFAP4:1.2838151108;NFE2L1:1.27635952213;GCM1,2:1.27543940204;FOXL1:1.27375669548;UFEwm:1.27157144664;NFATC1..3:1.25154678484;ATF6:1.21332203071;PAX1,9:1.20447084533;NR3C1:1.18150457013;TBX4,5:1.13040550291;NFIX:1.11854237704;TEF:1.09628764433;HMX1:1.08247344462;TAL1_TCF{3,4,12}:1.03038423312;MAZ:1.03018913982;RXR{A,B,G}:1.0244948264;HOX{A4,D4}:1.00384728966;FOXO1,3,4:0.9991187718;MTE{core}:0.96537226311;NKX2-1,4:0.951605071198;NANOG{mouse}:0.942743723733;EBF1:0.90832035222;ADNP_IRX_SIX_ZHX:0.904669346384;GATA4:0.893701525359;HOX{A5,B5}:0.876526059205;T:0.866528977022;EN1,2:0.84274487492;TFCP2:0.780423768454;GTF2A1,2:0.753882409178;KLF4:0.753793098645;GTF2I:0.73879220752;NKX2-2,8:0.725380101663;HIF1A:0.702791357505;LHX3,4:0.693623331247;GFI1B:0.684955513454;TBP:0.678889981957;FOX{I1,J2}:0.677297955021;NKX3-2:0.644094098352;FOXA2:0.628646934155;SOX5:0.615236314264;TLX1..3_NFIC{dimer}:0.606079493718;HIC1:0.605397246769;ZNF423:0.591056575639;TFAP2B:0.554813013205;HSF1,2:0.546604049241;XCPE1{core}:0.537472428992;NR6A1:0.516869972974;NHLH1,2:0.500190612994;MEF2{A,B,C,D}:0.490983545679;ARID5B:0.482579376534;PATZ1:0.467873493853;RXRA_VDR{dimer}:0.465102507739;ZNF148:0.448921029542;HBP1_HMGB_SSRP1_UBTF:0.420801708763;DBP:0.412376336079;TFAP2{A,C}:0.392407246042;HLF:0.369444618233;CDC5L:0.340689690361;SOX17:0.326281999627;MZF1:0.293783467627;CRX:0.291076426441;PRDM1:0.2732528767;STAT2,4,6:0.263702011363;AR:0.263541714927;STAT1,3:0.26275439814;NFE2L2:0.254025221621;GFI1:0.232947745494;MTF1:0.23230414595;ZBTB6:0.20839340311;EGR1..3:0.196851188603;MYB:0.18924125836;MYFfamily:0.142798629482;SREBF1,2:0.136811808005;HAND1,2:0.119117640762;CEBPA,B_DDIT3:0.116156412769;ZNF384:0.114101409378;FOX{D1,D2}:0.0956336337869;PAX5:0.086022377253;NR1H4:0.0818449142766;PRRX1,2:0.0772961153174;PAX8:0.0768943507537;PAX2:0.00231935641151;TGIF1:-0.0136992640478;SOX2:-0.02579541314;OCT4_SOX2{dimer}:-0.0346218945096;STAT5{A,B}:-0.0540963382699;BACH2:-0.0638168957905;SPZ1:-0.0642810337717;HOXA9_MEIS1:-0.077140832184;RREB1:-0.0928351882825;AHR_ARNT_ARNT2:-0.0949364876086;NKX2-3_NKX2-5:-0.100870430552;POU6F1:-0.141240461037;MED-1{core}:-0.154932237217;LEF1_TCF7_TCF7L1,2:-0.168782207091;JUN:-0.169999943905;EP300:-0.173910066478;IRF1,2:-0.174917150405;HNF1A:-0.176553900325;FOSL2:-0.18062841014;ZNF143:-0.186502554206;NFE2:-0.201776400133;POU5F1:-0.22228388461;HNF4A_NR2F1,2:-0.23395959495;bHLH_family:-0.238177354807;REST:-0.280639434153;ELK1,4_GABP{A,B1}:-0.29431838815;NRF1:-0.307016166408;NKX6-1,2:-0.314150475219;CREB1:-0.318904526113;TFDP1:-0.318952922157;NFIL3:-0.335888120826;ZIC1..3:-0.337052923083;FOS_FOS{B,L1}_JUN{B,D}:-0.340062199439;SP1:-0.360288604094;AIRE:-0.367396102249;RFX1:-0.367946690317;BPTF:-0.39278463981;FOXP3:-0.393452822383;ATF2:-0.397196084568;DMAP1_NCOR{1,2}_SMARC:-0.402318873636;PPARG:-0.40414950716;RUNX1..3:-0.407969075283;YY1:-0.412332701675;NANOG:-0.412990838896;TLX2:-0.440467112525;ETS1,2:-0.450951862702;IKZF2:-0.459011347888;SPI1:-0.497716292898;FOXD3:-0.51035512878;ATF5_CREB3:-0.532495610348;ESRRA:-0.544919142206;ONECUT1,2:-0.562461325016;POU3F1..4:-0.575026310864;TOPORS:-0.579105969388;PAX6:-0.593556048033;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.595626595421;NFKB1_REL_RELA:-0.603733801503;NR5A1,2:-0.606383100294;ELF1,2,4:-0.608975837838;SPIB:-0.646770889245;SOX{8,9,10}:-0.651369294207;IRF7:-0.662454390111;FOXN1:-0.671401757239;PAX4:-0.684250564886;ZFP161:-0.691369621883;SNAI1..3:-0.730203567662;GATA6:-0.739461213058;FOX{F1,F2,J1}:-0.758024236983;BREu{core}:-0.769417610728;FOXQ1:-0.772481438753;E2F1..5:-0.776990411987;ZBTB16:-0.824171106212;CDX1,2,4:-0.836251098533;NFY{A,B,C}:-0.842110295979;RORA:-0.851946661855;RFX2..5_RFXANK_RFXAP:-0.852130654674;PAX3,7:-0.884694001063;FOXM1:-0.888199134174;ZEB1:-0.920935652831;PDX1:-0.947155812212;ATF4:-0.957604219089;PITX1..3:-0.961701273351;POU1F1:-0.975641802152;VSX1,2:-1.12415433067;FOXP1:-1.19641959297;LMO2:-1.22003317283;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.33666713444;RBPJ:-1.33990092422;CUX2:-1.34423370995;MYOD1:-1.36044630942;ALX1:-1.41815350434;PBX1:-1.53485414488;POU2F1..3:-1.92025608719 | |top_motifs=HOX{A6,A7,B6,B7}:1.92545557997;MAFB:1.83524311417;GZF1:1.80072212628;HES1:1.61151380873;TEAD1:1.51574510646;NKX3-1:1.49760314082;ESR1:1.47702032951;XBP1:1.46875300694;SMAD1..7,9:1.44397168075;HMGA1,2:1.42799538341;MYBL2:1.4245513539;ALX4:1.4068173243;GLI1..3:1.40502596015;EVI1:1.39569505278;TP53:1.3942863528;IKZF1:1.35306959954;SRF:1.29516485114;ZNF238:1.29303365066;TFAP4:1.2838151108;NFE2L1:1.27635952213;GCM1,2:1.27543940204;FOXL1:1.27375669548;UFEwm:1.27157144664;NFATC1..3:1.25154678484;ATF6:1.21332203071;PAX1,9:1.20447084533;NR3C1:1.18150457013;TBX4,5:1.13040550291;NFIX:1.11854237704;TEF:1.09628764433;HMX1:1.08247344462;TAL1_TCF{3,4,12}:1.03038423312;MAZ:1.03018913982;RXR{A,B,G}:1.0244948264;HOX{A4,D4}:1.00384728966;FOXO1,3,4:0.9991187718;MTE{core}:0.96537226311;NKX2-1,4:0.951605071198;NANOG{mouse}:0.942743723733;EBF1:0.90832035222;ADNP_IRX_SIX_ZHX:0.904669346384;GATA4:0.893701525359;HOX{A5,B5}:0.876526059205;T:0.866528977022;EN1,2:0.84274487492;TFCP2:0.780423768454;GTF2A1,2:0.753882409178;KLF4:0.753793098645;GTF2I:0.73879220752;NKX2-2,8:0.725380101663;HIF1A:0.702791357505;LHX3,4:0.693623331247;GFI1B:0.684955513454;TBP:0.678889981957;FOX{I1,J2}:0.677297955021;NKX3-2:0.644094098352;FOXA2:0.628646934155;SOX5:0.615236314264;TLX1..3_NFIC{dimer}:0.606079493718;HIC1:0.605397246769;ZNF423:0.591056575639;TFAP2B:0.554813013205;HSF1,2:0.546604049241;XCPE1{core}:0.537472428992;NR6A1:0.516869972974;NHLH1,2:0.500190612994;MEF2{A,B,C,D}:0.490983545679;ARID5B:0.482579376534;PATZ1:0.467873493853;RXRA_VDR{dimer}:0.465102507739;ZNF148:0.448921029542;HBP1_HMGB_SSRP1_UBTF:0.420801708763;DBP:0.412376336079;TFAP2{A,C}:0.392407246042;HLF:0.369444618233;CDC5L:0.340689690361;SOX17:0.326281999627;MZF1:0.293783467627;CRX:0.291076426441;PRDM1:0.2732528767;STAT2,4,6:0.263702011363;AR:0.263541714927;STAT1,3:0.26275439814;NFE2L2:0.254025221621;GFI1:0.232947745494;MTF1:0.23230414595;ZBTB6:0.20839340311;EGR1..3:0.196851188603;MYB:0.18924125836;MYFfamily:0.142798629482;SREBF1,2:0.136811808005;HAND1,2:0.119117640762;CEBPA,B_DDIT3:0.116156412769;ZNF384:0.114101409378;FOX{D1,D2}:0.0956336337869;PAX5:0.086022377253;NR1H4:0.0818449142766;PRRX1,2:0.0772961153174;PAX8:0.0768943507537;PAX2:0.00231935641151;TGIF1:-0.0136992640478;SOX2:-0.02579541314;OCT4_SOX2{dimer}:-0.0346218945096;STAT5{A,B}:-0.0540963382699;BACH2:-0.0638168957905;SPZ1:-0.0642810337717;HOXA9_MEIS1:-0.077140832184;RREB1:-0.0928351882825;AHR_ARNT_ARNT2:-0.0949364876086;NKX2-3_NKX2-5:-0.100870430552;POU6F1:-0.141240461037;MED-1{core}:-0.154932237217;LEF1_TCF7_TCF7L1,2:-0.168782207091;JUN:-0.169999943905;EP300:-0.173910066478;IRF1,2:-0.174917150405;HNF1A:-0.176553900325;FOSL2:-0.18062841014;ZNF143:-0.186502554206;NFE2:-0.201776400133;POU5F1:-0.22228388461;HNF4A_NR2F1,2:-0.23395959495;bHLH_family:-0.238177354807;REST:-0.280639434153;ELK1,4_GABP{A,B1}:-0.29431838815;NRF1:-0.307016166408;NKX6-1,2:-0.314150475219;CREB1:-0.318904526113;TFDP1:-0.318952922157;NFIL3:-0.335888120826;ZIC1..3:-0.337052923083;FOS_FOS{B,L1}_JUN{B,D}:-0.340062199439;SP1:-0.360288604094;AIRE:-0.367396102249;RFX1:-0.367946690317;BPTF:-0.39278463981;FOXP3:-0.393452822383;ATF2:-0.397196084568;DMAP1_NCOR{1,2}_SMARC:-0.402318873636;PPARG:-0.40414950716;RUNX1..3:-0.407969075283;YY1:-0.412332701675;NANOG:-0.412990838896;TLX2:-0.440467112525;ETS1,2:-0.450951862702;IKZF2:-0.459011347888;SPI1:-0.497716292898;FOXD3:-0.51035512878;ATF5_CREB3:-0.532495610348;ESRRA:-0.544919142206;ONECUT1,2:-0.562461325016;POU3F1..4:-0.575026310864;TOPORS:-0.579105969388;PAX6:-0.593556048033;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.595626595421;NFKB1_REL_RELA:-0.603733801503;NR5A1,2:-0.606383100294;ELF1,2,4:-0.608975837838;SPIB:-0.646770889245;SOX{8,9,10}:-0.651369294207;IRF7:-0.662454390111;FOXN1:-0.671401757239;PAX4:-0.684250564886;ZFP161:-0.691369621883;SNAI1..3:-0.730203567662;GATA6:-0.739461213058;FOX{F1,F2,J1}:-0.758024236983;BREu{core}:-0.769417610728;FOXQ1:-0.772481438753;E2F1..5:-0.776990411987;ZBTB16:-0.824171106212;CDX1,2,4:-0.836251098533;NFY{A,B,C}:-0.842110295979;RORA:-0.851946661855;RFX2..5_RFXANK_RFXAP:-0.852130654674;PAX3,7:-0.884694001063;FOXM1:-0.888199134174;ZEB1:-0.920935652831;PDX1:-0.947155812212;ATF4:-0.957604219089;PITX1..3:-0.961701273351;POU1F1:-0.975641802152;VSX1,2:-1.12415433067;FOXP1:-1.19641959297;LMO2:-1.22003317283;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.33666713444;RBPJ:-1.33990092422;CUX2:-1.34423370995;MYOD1:-1.36044630942;ALX1:-1.41815350434;PBX1:-1.53485414488;POU2F1..3:-1.92025608719 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11329-117E6;search_select_hide=table117:FF:11329-117E6 | |||
}} | }} | ||
Latest revision as of 17:52, 4 June 2020
| Name: | Preadipocyte - omental, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11902 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11902
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11902
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.43 |
| 10 | 10 | 0.433 |
| 100 | 100 | 0.352 |
| 101 | 101 | 0.34 |
| 102 | 102 | 0.0648 |
| 103 | 103 | 0.514 |
| 104 | 104 | 0.865 |
| 105 | 105 | 0.162 |
| 106 | 106 | 0.485 |
| 107 | 107 | 0.191 |
| 108 | 108 | 0.488 |
| 109 | 109 | 0.271 |
| 11 | 11 | 0.334 |
| 110 | 110 | 0.747 |
| 111 | 111 | 0.871 |
| 112 | 112 | 0.993 |
| 113 | 113 | 0.629 |
| 114 | 114 | 0.368 |
| 115 | 115 | 0.126 |
| 116 | 116 | 0.484 |
| 117 | 117 | 0.0677 |
| 118 | 118 | 0.0707 |
| 119 | 119 | 0.404 |
| 12 | 12 | 0.121 |
| 120 | 120 | 0.862 |
| 121 | 121 | 0.747 |
| 122 | 122 | 0.63 |
| 123 | 123 | 0.0012 |
| 124 | 124 | 0.639 |
| 125 | 125 | 0.369 |
| 126 | 126 | 0.816 |
| 127 | 127 | 0.397 |
| 128 | 128 | 0.7 |
| 129 | 129 | 0.571 |
| 13 | 13 | 0.323 |
| 130 | 130 | 0.543 |
| 131 | 131 | 0.408 |
| 132 | 132 | 0.481 |
| 133 | 133 | 0.948 |
| 134 | 134 | 0.212 |
| 135 | 135 | 0.108 |
| 136 | 136 | 0.409 |
| 137 | 137 | 0.916 |
| 138 | 138 | 0.859 |
| 139 | 139 | 0.906 |
| 14 | 14 | 0.384 |
| 140 | 140 | 0.744 |
| 141 | 141 | 0.302 |
| 142 | 142 | 0.913 |
| 143 | 143 | 0.929 |
| 144 | 144 | 0.933 |
| 145 | 145 | 0.833 |
| 146 | 146 | 0.841 |
| 147 | 147 | 0.0891 |
| 148 | 148 | 0.184 |
| 149 | 149 | 0.00187 |
| 15 | 15 | 0.885 |
| 150 | 150 | 0.986 |
| 151 | 151 | 0.884 |
| 152 | 152 | 0.0175 |
| 153 | 153 | 0.247 |
| 154 | 154 | 0.758 |
| 155 | 155 | 0.00348 |
| 156 | 156 | 0.639 |
| 157 | 157 | 0.28 |
| 158 | 158 | 0.0202 |
| 159 | 159 | 0.773 |
| 16 | 16 | 0.0594 |
| 160 | 160 | 0.735 |
| 161 | 161 | 0.0453 |
| 162 | 162 | 0.657 |
| 163 | 163 | 0.43 |
| 164 | 164 | 0.7 |
| 165 | 165 | 0.813 |
| 166 | 166 | 0.408 |
| 167 | 167 | 0.365 |
| 168 | 168 | 0.746 |
| 169 | 169 | 0.126 |
| 17 | 17 | 0.796 |
| 18 | 18 | 0.203 |
| 19 | 19 | 0.0341 |
| 2 | 2 | 0.592 |
| 20 | 20 | 0.17 |
| 21 | 21 | 0.39 |
| 22 | 22 | 0.473 |
| 23 | 23 | 0.0904 |
| 24 | 24 | 0.214 |
| 25 | 25 | 0.346 |
| 26 | 26 | 0.547 |
| 27 | 27 | 0.563 |
| 28 | 28 | 0.226 |
| 29 | 29 | 0.232 |
| 3 | 3 | 0.932 |
| 30 | 30 | 0.156 |
| 31 | 31 | 0.851 |
| 32 | 32 | 4.90261e-11 |
| 33 | 33 | 0.359 |
| 34 | 34 | 0.67 |
| 35 | 35 | 0.449 |
| 36 | 36 | 0.129 |
| 37 | 37 | 0.872 |
| 38 | 38 | 0.466 |
| 39 | 39 | 0.292 |
| 4 | 4 | 0.655 |
| 40 | 40 | 0.438 |
| 41 | 41 | 0.767 |
| 42 | 42 | 0.505 |
| 43 | 43 | 0.904 |
| 44 | 44 | 0.556 |
| 45 | 45 | 0.623 |
| 46 | 46 | 0.895 |
| 47 | 47 | 0.388 |
| 48 | 48 | 0.371 |
| 49 | 49 | 0.974 |
| 5 | 5 | 0.469 |
| 50 | 50 | 0.888 |
| 51 | 51 | 0.842 |
| 52 | 52 | 0.498 |
| 53 | 53 | 0.0712 |
| 54 | 54 | 0.631 |
| 55 | 55 | 0.118 |
| 56 | 56 | 0.501 |
| 57 | 57 | 0.791 |
| 58 | 58 | 0.159 |
| 59 | 59 | 0.651 |
| 6 | 6 | 0.712 |
| 60 | 60 | 0.997 |
| 61 | 61 | 0.107 |
| 62 | 62 | 0.434 |
| 63 | 63 | 0.855 |
| 64 | 64 | 0.274 |
| 65 | 65 | 0.925 |
| 66 | 66 | 0.474 |
| 67 | 67 | 0.902 |
| 68 | 68 | 0.796 |
| 69 | 69 | 0.577 |
| 7 | 7 | 0.28 |
| 70 | 70 | 0.753 |
| 71 | 71 | 0.948 |
| 72 | 72 | 0.898 |
| 73 | 73 | 0.0521 |
| 74 | 74 | 0.438 |
| 75 | 75 | 0.389 |
| 76 | 76 | 0.13 |
| 77 | 77 | 0.143 |
| 78 | 78 | 0.0869 |
| 79 | 79 | 0.0244 |
| 8 | 8 | 0.908 |
| 80 | 80 | 0.87 |
| 81 | 81 | 0.572 |
| 82 | 82 | 0.757 |
| 83 | 83 | 0.906 |
| 84 | 84 | 0.0575 |
| 85 | 85 | 0.0493 |
| 86 | 86 | 0.584 |
| 87 | 87 | 0.814 |
| 88 | 88 | 0.664 |
| 89 | 89 | 0.46 |
| 9 | 9 | 0.229 |
| 90 | 90 | 0.92 |
| 91 | 91 | 0.692 |
| 92 | 92 | 0.238 |
| 93 | 93 | 0.44 |
| 94 | 94 | 0.768 |
| 95 | 95 | 0.461 |
| 96 | 96 | 0.232 |
| 97 | 97 | 0.209 |
| 98 | 98 | 0.389 |
| 99 | 99 | 0.0396 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11902
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002334 (preadipocyte)
0002579 (omentum preadipocyte)
UBERON: Anatomy
0000468 (multi-cellular organism)
0003688 (omentum)
0002100 (trunk)
0002384 (connective tissue)
0000479 (tissue)
0000064 (organ part)
0000466 (immaterial anatomical entity)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0004457 (cavity lining)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004923 (organ component layer)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002323 (body cavity)
0000042 (serous membrane)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002417 (abdominal segment of trunk)
0002358 (peritoneum)
0000916 (abdomen)
0003684 (abdominal cavity)
0001178 (visceral peritoneum)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000137 (human preadipocyte sample)
0000140 (human omentum preadipocyte sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
