FF:11383-118B6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00006002 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00013697 | ||
|accession_numbers=CAGE;DRX008197;DRR009069;DRZ000494;DRZ001879;DRZ011844;DRZ013229 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX012365;DRR013813;DRZ003014 | |||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000625 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000030 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD8%252b%2520T%2520Cells%252c%2520donor3.CNhs11999.11383-118B6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD8%252b%2520T%2520Cells%252c%2520donor3.CNhs11999.11383-118B6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD8%252b%2520T%2520Cells%252c%2520donor3.CNhs11999.11383-118B6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD8%252b%2520T%2520Cells%252c%2520donor3.CNhs11999.11383-118B6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD8%252b%2520T%2520Cells%252c%2520donor3.CNhs11999.11383-118B6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11383-118B6 | |id=FF:11383-118B6 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000030;;FF:0000210 | ||
|is_obsolete= | |||
|library_id=CNhs11999!SRhi10011.GTGAAA | |||
|library_id_phase_based=2:CNhs11999 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11383 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10011.GTGAAA.11383 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11383 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10011.GTGAAA.11383 | |||
|name=CD8+ T Cells, donor3 | |name=CD8+ T Cells, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11999,LSID837,release011,COMPLETED | |profile_hcage=CNhs11999,LSID837,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10011,,, | |profile_srnaseq=SRhi10011,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|rna_box=118 | |rna_box=118 | ||
|rna_catalog_number=3H100-26-10 | |rna_catalog_number=3H100-26-10 | ||
| Line 56: | Line 82: | ||
|rna_tube_id=118B6 | |rna_tube_id=118B6 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10011.GTGAAA | |||
|sample_age=53 | |sample_age=53 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.53178124274372e-234!GO:0043227;membrane-bound organelle;2.85503635570792e-206!GO:0043231;intracellular membrane-bound organelle;7.22312953302966e-206!GO:0043226;organelle;7.21053340540335e-195!GO:0043229;intracellular organelle;4.01110417004967e-194!GO:0005634;nucleus;3.52064217601486e-127!GO:0005737;cytoplasm;7.12128108237889e-125!GO:0044422;organelle part;5.09497007123733e-112!GO:0044446;intracellular organelle part;2.84578602272811e-110!GO:0043170;macromolecule metabolic process;3.52756211761216e-110!GO:0044237;cellular metabolic process;1.02973856362856e-101!GO:0044238;primary metabolic process;1.48159341593593e-99!GO:0043283;biopolymer metabolic process;5.51468238164455e-88!GO:0044428;nuclear part;3.79318939436184e-86!GO:0032991;macromolecular complex;1.87901356602267e-85!GO:0003723;RNA binding;1.65748194138461e-82!GO:0044444;cytoplasmic part;2.01438015541448e-76!GO:0030529;ribonucleoprotein complex;4.58435944946895e-74!GO:0010467;gene expression;7.83725796774404e-72!GO:0043233;organelle lumen;2.7277709437899e-68!GO:0031974;membrane-enclosed lumen;2.7277709437899e-68!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.09678148156892e-65!GO:0005515;protein binding;6.52867434909672e-64!GO:0031981;nuclear lumen;8.03838286929783e-56!GO:0003676;nucleic acid binding;5.14686395666252e-54!GO:0006396;RNA processing;4.15534996777367e-52!GO:0019538;protein metabolic process;1.31773675872346e-48!GO:0044267;cellular protein metabolic process;3.46215516597336e-47!GO:0033036;macromolecule localization;8.83303606585105e-47!GO:0044260;cellular macromolecule metabolic process;2.14998052199562e-46!GO:0016071;mRNA metabolic process;1.56610107130406e-45!GO:0016070;RNA metabolic process;3.45054959407303e-45!GO:0015031;protein transport;3.2626786636212e-44!GO:0006412;translation;3.34616380024844e-44!GO:0045184;establishment of protein localization;9.90991527855856e-43!GO:0043234;protein complex;1.38756858912699e-42!GO:0008104;protein localization;1.83473132751366e-42!GO:0008380;RNA splicing;3.4809979225267e-39!GO:0006397;mRNA processing;4.95356444286641e-38!GO:0005840;ribosome;3.80108135034961e-37!GO:0005739;mitochondrion;3.53690811498181e-36!GO:0005654;nucleoplasm;8.75800607961842e-36!GO:0031090;organelle membrane;8.97545550164438e-35!GO:0016043;cellular component organization and biogenesis;1.10753912073992e-34!GO:0009059;macromolecule biosynthetic process;1.21754455112418e-33!GO:0046907;intracellular transport;2.8336154317485e-33!GO:0006259;DNA metabolic process;2.2738544886814e-32!GO:0003735;structural constituent of ribosome;2.72105635793023e-32!GO:0031967;organelle envelope;8.83025922687275e-32!GO:0000166;nucleotide binding;1.48210867344963e-31!GO:0031975;envelope;1.83960207935473e-31!GO:0006886;intracellular protein transport;1.49722211186451e-30!GO:0033279;ribosomal subunit;1.66975253467822e-30!GO:0044451;nucleoplasm part;1.47187509411664e-29!GO:0005681;spliceosome;5.25034424297744e-29!GO:0005829;cytosol;5.3206306821282e-29!GO:0006512;ubiquitin cycle;7.064951280984e-29!GO:0065003;macromolecular complex assembly;1.12423930612399e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.12267686198718e-28!GO:0044429;mitochondrial part;1.94149500577848e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.54951880734642e-27!GO:0043412;biopolymer modification;3.16980445725058e-26!GO:0006996;organelle organization and biogenesis;4.14897256538658e-26!GO:0022607;cellular component assembly;8.15331490145405e-26!GO:0009058;biosynthetic process;4.64897409476031e-24!GO:0051641;cellular localization;8.59639057137327e-24!GO:0044249;cellular biosynthetic process;1.22978995510662e-23!GO:0044445;cytosolic part;1.54899820075291e-23!GO:0051649;establishment of cellular localization;1.66262044007582e-23!GO:0006464;protein modification process;2.89759914593818e-23!GO:0050794;regulation of cellular process;6.34345878169036e-23!GO:0032553;ribonucleotide binding;1.16307284154037e-22!GO:0032555;purine ribonucleotide binding;1.16307284154037e-22!GO:0043687;post-translational protein modification;1.46644429153819e-22!GO:0012501;programmed cell death;4.59301908610376e-22!GO:0006915;apoptosis;7.04473784059918e-22!GO:0008134;transcription factor binding;7.75003614006007e-22!GO:0008219;cell death;2.35142803174437e-21!GO:0016265;death;2.35142803174437e-21!GO:0017076;purine nucleotide binding;2.50928195626633e-21!GO:0019941;modification-dependent protein catabolic process;9.64858235351844e-21!GO:0043632;modification-dependent macromolecule catabolic process;9.64858235351844e-21!GO:0051603;proteolysis involved in cellular protein catabolic process;1.06473519026295e-20!GO:0006511;ubiquitin-dependent protein catabolic process;1.13624406303982e-20!GO:0017111;nucleoside-triphosphatase activity;1.30766622882181e-20!GO:0016462;pyrophosphatase activity;2.00229529071335e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.2441556977046e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;3.0027969040824e-20!GO:0044257;cellular protein catabolic process;3.71443026570058e-20!GO:0019222;regulation of metabolic process;5.16149666291912e-20!GO:0005730;nucleolus;5.47082739020846e-20!GO:0016874;ligase activity;9.76379032133006e-20!GO:0044265;cellular macromolecule catabolic process;4.00914215750565e-19!GO:0005524;ATP binding;4.09550219390783e-19!GO:0006605;protein targeting;8.15049063603669e-19!GO:0032559;adenyl ribonucleotide binding;1.00577749515034e-18!GO:0016604;nuclear body;1.17190361793521e-18!GO:0022618;protein-RNA complex assembly;1.87050625422522e-18!GO:0043285;biopolymer catabolic process;3.32625858460828e-18!GO:0043228;non-membrane-bound organelle;3.32625858460828e-18!GO:0043232;intracellular non-membrane-bound organelle;3.32625858460828e-18!GO:0006913;nucleocytoplasmic transport;4.04249317288099e-18!GO:0005740;mitochondrial envelope;4.36762541948153e-18!GO:0031966;mitochondrial membrane;6.30786965084203e-18!GO:0051169;nuclear transport;8.01179129194188e-18!GO:0006325;establishment and/or maintenance of chromatin architecture;1.03234698958172e-17!GO:0051276;chromosome organization and biogenesis;1.50252706920428e-17!GO:0030554;adenyl nucleotide binding;2.90238729236864e-17!GO:0031323;regulation of cellular metabolic process;3.67076127246112e-17!GO:0007049;cell cycle;4.39753908800466e-17!GO:0019866;organelle inner membrane;6.81492127838328e-17!GO:0006323;DNA packaging;7.16154556687641e-17!GO:0050789;regulation of biological process;1.31881737449208e-16!GO:0006350;transcription;1.50411095240212e-16!GO:0008135;translation factor activity, nucleic acid binding;2.46134654691015e-16!GO:0016607;nuclear speck;6.03563019373058e-16!GO:0006974;response to DNA damage stimulus;7.634119285552e-16!GO:0015935;small ribosomal subunit;7.91728523099056e-16!GO:0015934;large ribosomal subunit;9.20933569860133e-16!GO:0042981;regulation of apoptosis;5.67795182569141e-15!GO:0010468;regulation of gene expression;6.13361644997626e-15!GO:0005635;nuclear envelope;7.07696398776005e-15!GO:0006119;oxidative phosphorylation;7.28368344113975e-15!GO:0043067;regulation of programmed cell death;7.79474305968545e-15!GO:0030163;protein catabolic process;9.0762924188799e-15!GO:0009057;macromolecule catabolic process;1.01283399295342e-14!GO:0031965;nuclear membrane;1.26987595247381e-14!GO:0012505;endomembrane system;1.27176619503746e-14!GO:0005743;mitochondrial inner membrane;1.63013785685165e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.74596345289946e-14!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.46302699371172e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;4.40701387665259e-14!GO:0000375;RNA splicing, via transesterification reactions;4.40701387665259e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.40701387665259e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.71375352834068e-14!GO:0004386;helicase activity;6.79921975911355e-14!GO:0003712;transcription cofactor activity;8.75221739191587e-14!GO:0042623;ATPase activity, coupled;8.92926904238473e-14!GO:0016887;ATPase activity;9.25117638802078e-14!GO:0032774;RNA biosynthetic process;1.08739502772365e-13!GO:0006351;transcription, DNA-dependent;1.14056190693372e-13!GO:0016568;chromatin modification;2.76077199436028e-13!GO:0006281;DNA repair;3.90965446862701e-13!GO:0017038;protein import;5.33781814587654e-13!GO:0044455;mitochondrial membrane part;5.9281118697422e-13!GO:0044453;nuclear membrane part;6.46660998339504e-13!GO:0008270;zinc ion binding;6.92563776217086e-13!GO:0006366;transcription from RNA polymerase II promoter;7.26927342954813e-13!GO:0045449;regulation of transcription;1.05602070402279e-12!GO:0006793;phosphorus metabolic process;1.35993543576309e-12!GO:0006796;phosphate metabolic process;1.35993543576309e-12!GO:0008026;ATP-dependent helicase activity;4.19132662923547e-12!GO:0006457;protein folding;4.84962388012153e-12!GO:0022402;cell cycle process;5.16031873051393e-12!GO:0003743;translation initiation factor activity;5.22509639881311e-12!GO:0008639;small protein conjugating enzyme activity;5.44601547271877e-12!GO:0000502;proteasome complex (sensu Eukaryota);6.33777604160332e-12!GO:0004842;ubiquitin-protein ligase activity;6.92492321784475e-12!GO:0065004;protein-DNA complex assembly;9.49289987766475e-12!GO:0006413;translational initiation;1.14429172081733e-11!GO:0031980;mitochondrial lumen;1.33620118316444e-11!GO:0005759;mitochondrial matrix;1.33620118316444e-11!GO:0005694;chromosome;1.59025818958075e-11!GO:0050657;nucleic acid transport;1.72944910683231e-11!GO:0051236;establishment of RNA localization;1.72944910683231e-11!GO:0050658;RNA transport;1.72944910683231e-11!GO:0006355;regulation of transcription, DNA-dependent;1.85889600973933e-11!GO:0006403;RNA localization;2.33940805195105e-11!GO:0051726;regulation of cell cycle;2.41139076281117e-11!GO:0005643;nuclear pore;3.28878902110258e-11!GO:0006333;chromatin assembly or disassembly;3.73054913392116e-11!GO:0019787;small conjugating protein ligase activity;4.12503908074239e-11!GO:0044248;cellular catabolic process;4.27978705753214e-11!GO:0048770;pigment granule;4.30864608945755e-11!GO:0042470;melanosome;4.30864608945755e-11!GO:0000074;regulation of progression through cell cycle;4.63919765706375e-11!GO:0016310;phosphorylation;5.60564221887369e-11!GO:0065007;biological regulation;6.61561792498189e-11!GO:0006446;regulation of translational initiation;7.20982896097585e-11!GO:0005794;Golgi apparatus;9.87331351590488e-11!GO:0005746;mitochondrial respiratory chain;1.10111619875533e-10!GO:0048193;Golgi vesicle transport;1.27202569273715e-10!GO:0048523;negative regulation of cellular process;2.70415899950226e-10!GO:0051170;nuclear import;2.80029876968495e-10!GO:0006606;protein import into nucleus;2.81066390788299e-10!GO:0042254;ribosome biogenesis and assembly;5.90286928988863e-10!GO:0003677;DNA binding;6.05992619355588e-10!GO:0009719;response to endogenous stimulus;8.45820674718622e-10!GO:0044427;chromosomal part;1.11864637166635e-09!GO:0007243;protein kinase cascade;1.28870063899229e-09!GO:0051028;mRNA transport;1.38125632468152e-09!GO:0050136;NADH dehydrogenase (quinone) activity;1.46876044520576e-09!GO:0003954;NADH dehydrogenase activity;1.46876044520576e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.46876044520576e-09!GO:0051082;unfolded protein binding;1.48729968411885e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.80308265871735e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.31885661195564e-09!GO:0031324;negative regulation of cellular metabolic process;2.95111038373403e-09!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.37082679810805e-09!GO:0016564;transcription repressor activity;3.67684621946688e-09!GO:0003713;transcription coactivator activity;4.16586621222852e-09!GO:0016563;transcription activator activity;4.37364133385167e-09!GO:0016881;acid-amino acid ligase activity;4.41245735273628e-09!GO:0048519;negative regulation of biological process;5.97065293776583e-09!GO:0046930;pore complex;6.16806262490781e-09!GO:0043566;structure-specific DNA binding;6.48461436405513e-09!GO:0016740;transferase activity;6.50358021243789e-09!GO:0005768;endosome;1.04375701921722e-08!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.17565964743479e-08!GO:0065002;intracellular protein transport across a membrane;1.20158350710982e-08!GO:0016192;vesicle-mediated transport;1.26323539256815e-08!GO:0042775;organelle ATP synthesis coupled electron transport;1.55557214997843e-08!GO:0042773;ATP synthesis coupled electron transport;1.55557214997843e-08!GO:0000785;chromatin;1.57214030794068e-08!GO:0046914;transition metal ion binding;1.81063554768661e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.82470081445572e-08!GO:0051246;regulation of protein metabolic process;2.92079286696917e-08!GO:0004674;protein serine/threonine kinase activity;2.97938442396038e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.27032698943128e-08!GO:0009892;negative regulation of metabolic process;3.28328891247215e-08!GO:0007242;intracellular signaling cascade;3.82921740581484e-08!GO:0030964;NADH dehydrogenase complex (quinone);4.0208948580584e-08!GO:0045271;respiratory chain complex I;4.0208948580584e-08!GO:0005747;mitochondrial respiratory chain complex I;4.0208948580584e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.34723474480079e-08!GO:0032446;protein modification by small protein conjugation;4.4261181964964e-08!GO:0065009;regulation of a molecular function;4.59852262925066e-08!GO:0008565;protein transporter activity;4.98551821837228e-08!GO:0003697;single-stranded DNA binding;5.80010421522673e-08!GO:0045786;negative regulation of progression through cell cycle;6.87872727259105e-08!GO:0019829;cation-transporting ATPase activity;7.67428462913269e-08!GO:0016481;negative regulation of transcription;7.75753909159825e-08!GO:0016567;protein ubiquitination;7.88131013423807e-08!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.88527447219863e-08!GO:0043065;positive regulation of apoptosis;8.3051021722565e-08!GO:0043068;positive regulation of programmed cell death;1.25610132083665e-07!GO:0006917;induction of apoptosis;2.00924775882931e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.00924775882931e-07!GO:0000151;ubiquitin ligase complex;2.10004289002791e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.48616815618799e-07!GO:0030532;small nuclear ribonucleoprotein complex;2.6524171666431e-07!GO:0016072;rRNA metabolic process;3.01404838617112e-07!GO:0006260;DNA replication;3.04397503553722e-07!GO:0006399;tRNA metabolic process;3.32589185215774e-07!GO:0012502;induction of programmed cell death;3.39027792213446e-07!GO:0006364;rRNA processing;3.8014226305019e-07!GO:0044432;endoplasmic reticulum part;3.89824498164134e-07!GO:0031497;chromatin assembly;4.77262641471566e-07!GO:0019899;enzyme binding;5.27840837926215e-07!GO:0006334;nucleosome assembly;7.42817657664507e-07!GO:0051168;nuclear export;7.57183138492551e-07!GO:0005761;mitochondrial ribosome;1.02482996969187e-06!GO:0000313;organellar ribosome;1.02482996969187e-06!GO:0003724;RNA helicase activity;1.0482534393876e-06!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.05836634517872e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.16173113265409e-06!GO:0043069;negative regulation of programmed cell death;1.20553774032801e-06!GO:0000278;mitotic cell cycle;1.25618701442912e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.33738528343818e-06!GO:0051186;cofactor metabolic process;1.48920419688457e-06!GO:0043066;negative regulation of apoptosis;1.96165435037632e-06!GO:0005783;endoplasmic reticulum;2.27654584338833e-06!GO:0016787;hydrolase activity;2.36626331192525e-06!GO:0006916;anti-apoptosis;2.42654711570154e-06!GO:0000245;spliceosome assembly;2.93459951911267e-06!GO:0003924;GTPase activity;2.97239479743756e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.3020520111922e-06!GO:0009060;aerobic respiration;3.30858688510888e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.41254109420621e-06!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.41254109420621e-06!GO:0009259;ribonucleotide metabolic process;3.77402973816493e-06!GO:0009260;ribonucleotide biosynthetic process;3.81010365522504e-06!GO:0006888;ER to Golgi vesicle-mediated transport;4.3956187398371e-06!GO:0005839;proteasome core complex (sensu Eukaryota);4.66760940704383e-06!GO:0005789;endoplasmic reticulum membrane;5.79955456551228e-06!GO:0003714;transcription corepressor activity;5.96546500106858e-06!GO:0015986;ATP synthesis coupled proton transport;6.37139275924355e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.37139275924355e-06!GO:0006164;purine nucleotide biosynthetic process;8.06159060394032e-06!GO:0009152;purine ribonucleotide biosynthetic process;8.22005832059412e-06!GO:0005813;centrosome;9.90679235929669e-06!GO:0016363;nuclear matrix;1.00918461460178e-05!GO:0015078;hydrogen ion transmembrane transporter activity;1.01990088663964e-05!GO:0006402;mRNA catabolic process;1.0305081768258e-05!GO:0006401;RNA catabolic process;1.14167805216523e-05!GO:0005525;GTP binding;1.21120773778761e-05!GO:0004298;threonine endopeptidase activity;1.21991261134962e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.34082281064049e-05!GO:0004812;aminoacyl-tRNA ligase activity;1.34082281064049e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.34082281064049e-05!GO:0016779;nucleotidyltransferase activity;1.35298271239409e-05!GO:0006732;coenzyme metabolic process;1.42847248320101e-05!GO:0006163;purine nucleotide metabolic process;1.65680033050436e-05!GO:0009150;purine ribonucleotide metabolic process;1.8507997530962e-05!GO:0009056;catabolic process;1.96401875984559e-05!GO:0007264;small GTPase mediated signal transduction;2.07555135552519e-05!GO:0006461;protein complex assembly;2.237064076109e-05!GO:0005793;ER-Golgi intermediate compartment;2.25091336089968e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.56261787118047e-05!GO:0015399;primary active transmembrane transporter activity;2.56261787118047e-05!GO:0008186;RNA-dependent ATPase activity;2.58613086746263e-05!GO:0006352;transcription initiation;2.58869667980676e-05!GO:0045259;proton-transporting ATP synthase complex;2.97675396269396e-05!GO:0044431;Golgi apparatus part;3.27057593632056e-05!GO:0043038;amino acid activation;3.31562670805676e-05!GO:0006418;tRNA aminoacylation for protein translation;3.31562670805676e-05!GO:0043039;tRNA aminoacylation;3.31562670805676e-05!GO:0005815;microtubule organizing center;3.31562670805676e-05!GO:0006754;ATP biosynthetic process;3.47757317220546e-05!GO:0006753;nucleoside phosphate metabolic process;3.47757317220546e-05!GO:0009142;nucleoside triphosphate biosynthetic process;3.62827471037768e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.62827471037768e-05!GO:0008632;apoptotic program;3.66409135950884e-05!GO:0045333;cellular respiration;3.95602988189719e-05!GO:0030120;vesicle coat;4.068848012909e-05!GO:0030662;coated vesicle membrane;4.068848012909e-05!GO:0048475;coated membrane;4.6057901956383e-05!GO:0030117;membrane coat;4.6057901956383e-05!GO:0016469;proton-transporting two-sector ATPase complex;4.71892394805925e-05!GO:0051427;hormone receptor binding;5.13146911982531e-05!GO:0007005;mitochondrion organization and biogenesis;5.36956885801736e-05!GO:0005667;transcription factor complex;5.6014280187307e-05!GO:0003729;mRNA binding;6.90415163613351e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.02926401201049e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.02926401201049e-05!GO:0016301;kinase activity;7.03727179378709e-05!GO:0050790;regulation of catalytic activity;7.18948610050851e-05!GO:0016251;general RNA polymerase II transcription factor activity;7.21557209549065e-05!GO:0060090;molecular adaptor activity;7.62597630066297e-05!GO:0006613;cotranslational protein targeting to membrane;8.01474031333049e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;8.07419613065781e-05!GO:0030695;GTPase regulator activity;8.08018116236745e-05!GO:0048522;positive regulation of cellular process;8.15724816873458e-05!GO:0006417;regulation of translation;8.18584183802438e-05!GO:0004004;ATP-dependent RNA helicase activity;8.19062752089938e-05!GO:0009199;ribonucleoside triphosphate metabolic process;8.98377747460897e-05!GO:0008234;cysteine-type peptidase activity;9.27963362896614e-05!GO:0044440;endosomal part;9.40742794614693e-05!GO:0010008;endosome membrane;9.40742794614693e-05!GO:0035257;nuclear hormone receptor binding;9.73974501944161e-05!GO:0003690;double-stranded DNA binding;0.000103777743189605!GO:0005770;late endosome;0.000109900012261906!GO:0045892;negative regulation of transcription, DNA-dependent;0.000118595160010085!GO:0016197;endosome transport;0.000118595160010085!GO:0019783;small conjugating protein-specific protease activity;0.000121800063116753!GO:0015630;microtubule cytoskeleton;0.000125883479849839!GO:0046034;ATP metabolic process;0.00012988389164529!GO:0009141;nucleoside triphosphate metabolic process;0.000133408022064232!GO:0015631;tubulin binding;0.000135191737989494!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.000136562212587854!GO:0051188;cofactor biosynthetic process;0.000155068887710333!GO:0009205;purine ribonucleoside triphosphate metabolic process;0.000162145093062487!GO:0009144;purine nucleoside triphosphate metabolic process;0.000162145093062487!GO:0009615;response to virus;0.000167192424695333!GO:0001772;immunological synapse;0.000193313626364045!GO:0004843;ubiquitin-specific protease activity;0.000194629367946795!GO:0007265;Ras protein signal transduction;0.000195654613763799!GO:0022403;cell cycle phase;0.000195654613763799!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000200641376490334!GO:0043623;cellular protein complex assembly;0.000206638339356265!GO:0006099;tricarboxylic acid cycle;0.000207931691741495!GO:0046356;acetyl-CoA catabolic process;0.000207931691741495!GO:0032561;guanyl ribonucleotide binding;0.000209659187863748!GO:0019001;guanyl nucleotide binding;0.000209659187863748!GO:0042110;T cell activation;0.000222928945559139!GO:0031326;regulation of cellular biosynthetic process;0.000244238360931726!GO:0043492;ATPase activity, coupled to movement of substances;0.000275159405129411!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000278852011696969!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000288972259929418!GO:0005769;early endosome;0.000314544959701036!GO:0006261;DNA-dependent DNA replication;0.000334979551417974!GO:0006607;NLS-bearing substrate import into nucleus;0.000363047269883805!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000379794456056893!GO:0006310;DNA recombination;0.000422991673340695!GO:0006084;acetyl-CoA metabolic process;0.000431323611256363!GO:0008017;microtubule binding;0.000486654992112215!GO:0004221;ubiquitin thiolesterase activity;0.000491224438626179!GO:0009108;coenzyme biosynthetic process;0.000526794319139803!GO:0006611;protein export from nucleus;0.000547504799803992!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000573931436277128!GO:0006612;protein targeting to membrane;0.0005875550431538!GO:0009889;regulation of biosynthetic process;0.000591726541396934!GO:0005773;vacuole;0.000644176978769545!GO:0005083;small GTPase regulator activity;0.000644424441443113!GO:0048468;cell development;0.000653659369545222!GO:0030384;phosphoinositide metabolic process;0.000658738542745467!GO:0000087;M phase of mitotic cell cycle;0.000716513917114226!GO:0009966;regulation of signal transduction;0.000725267664267394!GO:0009055;electron carrier activity;0.000788162480567571!GO:0006468;protein amino acid phosphorylation;0.000797794970456816!GO:0046966;thyroid hormone receptor binding;0.00079840808967523!GO:0000139;Golgi membrane;0.000817787496550327!GO:0006891;intra-Golgi vesicle-mediated transport;0.000852012248835014!GO:0005885;Arp2/3 protein complex;0.000854853979101744!GO:0006752;group transfer coenzyme metabolic process;0.000891321350809636!GO:0046649;lymphocyte activation;0.000941655814627974!GO:0007050;cell cycle arrest;0.000983517311390515!GO:0007067;mitosis;0.00101561838461126!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00102024300209262!GO:0008654;phospholipid biosynthetic process;0.00102024300209262!GO:0048471;perinuclear region of cytoplasm;0.00109958756762213!GO:0048518;positive regulation of biological process;0.00114979406642428!GO:0006338;chromatin remodeling;0.00120750593998073!GO:0009109;coenzyme catabolic process;0.00126600714449612!GO:0042101;T cell receptor complex;0.0013112666474315!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00131190850751575!GO:0006405;RNA export from nucleus;0.00136822136186422!GO:0019867;outer membrane;0.00138138367165382!GO:0005741;mitochondrial outer membrane;0.00139723250299295!GO:0051301;cell division;0.00142065470549679!GO:0022415;viral reproductive process;0.00142161946085502!GO:0003682;chromatin binding;0.00142161946085502!GO:0005798;Golgi-associated vesicle;0.00146302776463096!GO:0006414;translational elongation;0.00150608831009474!GO:0031072;heat shock protein binding;0.00150608831009474!GO:0031968;organelle outer membrane;0.00150608831009474!GO:0005637;nuclear inner membrane;0.00152855682740405!GO:0006650;glycerophospholipid metabolic process;0.0015374578129266!GO:0045941;positive regulation of transcription;0.0015374578129266!GO:0043021;ribonucleoprotein binding;0.00154884897681913!GO:0008047;enzyme activator activity;0.00159490256788761!GO:0031625;ubiquitin protein ligase binding;0.00160803287865741!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00165214174028149!GO:0003899;DNA-directed RNA polymerase activity;0.00169317294563016!GO:0006383;transcription from RNA polymerase III promoter;0.00178998447750542!GO:0005070;SH3/SH2 adaptor activity;0.00187627859876783!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00193109574582041!GO:0008287;protein serine/threonine phosphatase complex;0.00195812974247257!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00218605800816768!GO:0051252;regulation of RNA metabolic process;0.00219309308411426!GO:0008022;protein C-terminus binding;0.00220899536464215!GO:0045893;positive regulation of transcription, DNA-dependent;0.00229144422935184!GO:0019843;rRNA binding;0.00230191035405119!GO:0003746;translation elongation factor activity;0.00234449505429143!GO:0005048;signal sequence binding;0.00235687395849611!GO:0016585;chromatin remodeling complex;0.00246425499693082!GO:0051251;positive regulation of lymphocyte activation;0.00248645102196168!GO:0046489;phosphoinositide biosynthetic process;0.00252652416715612!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00266290995246404!GO:0000323;lytic vacuole;0.00274221673750514!GO:0005764;lysosome;0.00274221673750514!GO:0005669;transcription factor TFIID complex;0.00281778772245062!GO:0046822;regulation of nucleocytoplasmic transport;0.00282063580585549!GO:0005684;U2-dependent spliceosome;0.00282835011017483!GO:0051187;cofactor catabolic process;0.00295039840125918!GO:0044452;nucleolar part;0.00298416104961966!GO:0043488;regulation of mRNA stability;0.00307313507547141!GO:0043487;regulation of RNA stability;0.00307313507547141!GO:0031252;leading edge;0.00318055518396989!GO:0033673;negative regulation of kinase activity;0.00318608122989209!GO:0006469;negative regulation of protein kinase activity;0.00318608122989209!GO:0032200;telomere organization and biogenesis;0.00321655910343534!GO:0000723;telomere maintenance;0.00321655910343534!GO:0016790;thiolester hydrolase activity;0.00327633816476959!GO:0003725;double-stranded RNA binding;0.00336547567388411!GO:0016584;nucleosome positioning;0.0034847688848461!GO:0008139;nuclear localization sequence binding;0.00355701178409082!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00355789522348828!GO:0051789;response to protein stimulus;0.00362807849919058!GO:0006986;response to unfolded protein;0.00362807849919058!GO:0030518;steroid hormone receptor signaling pathway;0.00376623797337966!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00381984275459204!GO:0030258;lipid modification;0.0040191534860377!GO:0005774;vacuolar membrane;0.00406105212136923!GO:0051223;regulation of protein transport;0.00411727859217415!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00411727859217415!GO:0009967;positive regulation of signal transduction;0.00413272792876513!GO:0051090;regulation of transcription factor activity;0.00414906849165731!GO:0003678;DNA helicase activity;0.00423907051108129!GO:0007034;vacuolar transport;0.00427212607263614!GO:0008168;methyltransferase activity;0.00432713924077907!GO:0000786;nucleosome;0.00438105153369515!GO:0016741;transferase activity, transferring one-carbon groups;0.00444972604966558!GO:0051329;interphase of mitotic cell cycle;0.00455209373532462!GO:0030658;transport vesicle membrane;0.00479351613971248!GO:0005096;GTPase activator activity;0.00480731906277417!GO:0051348;negative regulation of transferase activity;0.00504896931375491!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00506289488110993!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00506289488110993!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00506289488110993!GO:0006818;hydrogen transport;0.00543190150941032!GO:0008033;tRNA processing;0.00568032691329601!GO:0046474;glycerophospholipid biosynthetic process;0.00571045083497833!GO:0045603;positive regulation of endothelial cell differentiation;0.00579159188959901!GO:0003711;transcription elongation regulator activity;0.00611291395939591!GO:0000049;tRNA binding;0.00624758901456678!GO:0004527;exonuclease activity;0.00627604952661698!GO:0015992;proton transport;0.00636029231786671!GO:0005762;mitochondrial large ribosomal subunit;0.00668452702429858!GO:0000315;organellar large ribosomal subunit;0.00668452702429858!GO:0042802;identical protein binding;0.00695183540459274!GO:0016311;dephosphorylation;0.00700643133521129!GO:0000279;M phase;0.0070088266131083!GO:0051539;4 iron, 4 sulfur cluster binding;0.00703687237076413!GO:0004672;protein kinase activity;0.00713317329073273!GO:0040029;regulation of gene expression, epigenetic;0.00729687276060813!GO:0048500;signal recognition particle;0.00734889813067913!GO:0005765;lysosomal membrane;0.00734889813067913!GO:0043414;biopolymer methylation;0.0073742761449713!GO:0051098;regulation of binding;0.00750837088729447!GO:0000781;chromosome, telomeric region;0.00752447171646506!GO:0051338;regulation of transferase activity;0.00757726118128342!GO:0003684;damaged DNA binding;0.00790148987061253!GO:0051336;regulation of hydrolase activity;0.00811532354083942!GO:0005819;spindle;0.00812409509107038!GO:0019904;protein domain specific binding;0.00816039492783699!GO:0017091;AU-rich element binding;0.00819345608461667!GO:0050779;RNA destabilization;0.00819345608461667!GO:0000289;poly(A) tail shortening;0.00819345608461667!GO:0043681;protein import into mitochondrion;0.00825707033003896!GO:0030521;androgen receptor signaling pathway;0.00866065956234102!GO:0004722;protein serine/threonine phosphatase activity;0.00866065956234102!GO:0051052;regulation of DNA metabolic process;0.00870671186864326!GO:0031902;late endosome membrane;0.00877247527232508!GO:0009893;positive regulation of metabolic process;0.00883913568532329!GO:0048487;beta-tubulin binding;0.00907078768028389!GO:0051325;interphase;0.00925915825340322!GO:0030522;intracellular receptor-mediated signaling pathway;0.00930257630600432!GO:0000119;mediator complex;0.00932257449593803!GO:0044437;vacuolar part;0.00940474697529231!GO:0051092;activation of NF-kappaB transcription factor;0.00947649373849934!GO:0046983;protein dimerization activity;0.00990151804283327!GO:0032508;DNA duplex unwinding;0.0103798632235007!GO:0032392;DNA geometric change;0.0103798632235007!GO:0006376;mRNA splice site selection;0.0103798632235007!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0103798632235007!GO:0043549;regulation of kinase activity;0.0104681932702335!GO:0030880;RNA polymerase complex;0.0104782451312875!GO:0015923;mannosidase activity;0.0105839018926039!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0106792248238599!GO:0032259;methylation;0.0110244715317896!GO:0003702;RNA polymerase II transcription factor activity;0.011115564284803!GO:0008276;protein methyltransferase activity;0.0111559540319647!GO:0006302;double-strand break repair;0.0112434647783142!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.0114796096616308!GO:0046854;phosphoinositide phosphorylation;0.0116953152771963!GO:0030660;Golgi-associated vesicle membrane;0.0118205572230537!GO:0000082;G1/S transition of mitotic cell cycle;0.0118551360676596!GO:0000118;histone deacetylase complex;0.0119204290042398!GO:0016791;phosphoric monoester hydrolase activity;0.0122850815346795!GO:0008312;7S RNA binding;0.0124832562028744!GO:0006984;ER-nuclear signaling pathway;0.0125203144827994!GO:0000059;protein import into nucleus, docking;0.0128594416501829!GO:0043087;regulation of GTPase activity;0.0132039404071455!GO:0033116;ER-Golgi intermediate compartment membrane;0.0133820084834859!GO:0051235;maintenance of localization;0.0133988325235894!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0138392579063939!GO:0045047;protein targeting to ER;0.0138392579063939!GO:0051059;NF-kappaB binding;0.013913321810114!GO:0016569;covalent chromatin modification;0.0141143605186058!GO:0000209;protein polyubiquitination;0.0141690694927725!GO:0019901;protein kinase binding;0.0141895214635414!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0141895214635414!GO:0008637;apoptotic mitochondrial changes;0.0149083981374915!GO:0047485;protein N-terminus binding;0.0151150849393122!GO:0046834;lipid phosphorylation;0.0151517302547043!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0153706915728275!GO:0000428;DNA-directed RNA polymerase complex;0.0153706915728275!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0157159727840729!GO:0046467;membrane lipid biosynthetic process;0.0158441993785842!GO:0031461;cullin-RING ubiquitin ligase complex;0.0158506775685668!GO:0030118;clathrin coat;0.0160988848357907!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0161826222521425!GO:0006626;protein targeting to mitochondrion;0.0162385916750923!GO:0007004;telomere maintenance via telomerase;0.0162385916750923!GO:0043621;protein self-association;0.0163077789173574!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0166198062448353!GO:0032940;secretion by cell;0.0166333527572014!GO:0006839;mitochondrial transport;0.0171526151461148!GO:0016570;histone modification;0.0171526151461148!GO:0031982;vesicle;0.0171638512647364!GO:0006919;caspase activation;0.0171915337036845!GO:0004518;nuclease activity;0.0173653981357357!GO:0050811;GABA receptor binding;0.0173653981357357!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0173865791031051!GO:0008624;induction of apoptosis by extracellular signals;0.0181488386052491!GO:0045321;leukocyte activation;0.0181663101689454!GO:0000314;organellar small ribosomal subunit;0.0183552332272008!GO:0005763;mitochondrial small ribosomal subunit;0.0183552332272008!GO:0005657;replication fork;0.0183552332272008!GO:0045859;regulation of protein kinase activity;0.0185248002191037!GO:0043022;ribosome binding;0.0187905588196496!GO:0016605;PML body;0.0189785569132365!GO:0006354;RNA elongation;0.0193723151989118!GO:0007041;lysosomal transport;0.0196080789253245!GO:0030968;unfolded protein response;0.0196836478370816!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0197631672154384!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0197631672154384!GO:0007006;mitochondrial membrane organization and biogenesis;0.0197631672154384!GO:0030127;COPII vesicle coat;0.0197825264448314!GO:0012507;ER to Golgi transport vesicle membrane;0.0197825264448314!GO:0008601;protein phosphatase type 2A regulator activity;0.0198553424406607!GO:0005521;lamin binding;0.0202874491239178!GO:0043407;negative regulation of MAP kinase activity;0.020309870295815!GO:0005869;dynactin complex;0.020369203726892!GO:0006497;protein amino acid lipidation;0.0204739985566086!GO:0015980;energy derivation by oxidation of organic compounds;0.020693250832722!GO:0022411;cellular component disassembly;0.0212757510864856!GO:0022890;inorganic cation transmembrane transporter activity;0.0214994013228647!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0221139764311187!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.0223231361009012!GO:0050852;T cell receptor signaling pathway;0.0223478737375282!GO:0030134;ER to Golgi transport vesicle;0.0224342988096382!GO:0043281;regulation of caspase activity;0.0232629751049277!GO:0001667;ameboidal cell migration;0.0239956673299011!GO:0032027;myosin light chain binding;0.0239956673299011!GO:0000060;protein import into nucleus, translocation;0.0240037463917546!GO:0004576;oligosaccharyl transferase activity;0.0241943264198491!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0244036242793571!GO:0006595;polyamine metabolic process;0.0255174815672266!GO:0000287;magnesium ion binding;0.0256834712764221!GO:0004402;histone acetyltransferase activity;0.0261036125596732!GO:0004468;lysine N-acetyltransferase activity;0.0261036125596732!GO:0018193;peptidyl-amino acid modification;0.026254986537455!GO:0004721;phosphoprotein phosphatase activity;0.0267709366157626!GO:0033549;MAP kinase phosphatase activity;0.0270489363234708!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.0270489363234708!GO:0019058;viral infectious cycle;0.0274282552209583!GO:0045045;secretory pathway;0.0281363143218854!GO:0043433;negative regulation of transcription factor activity;0.0287532901879118!GO:0046426;negative regulation of JAK-STAT cascade;0.0288268386984111!GO:0006661;phosphatidylinositol biosynthetic process;0.0290452831121079!GO:0033157;regulation of intracellular protein transport;0.0290452831121079!GO:0042306;regulation of protein import into nucleus;0.0290452831121079!GO:0043280;positive regulation of caspase activity;0.0293132311875949!GO:0016279;protein-lysine N-methyltransferase activity;0.029390169751805!GO:0018024;histone-lysine N-methyltransferase activity;0.029390169751805!GO:0016278;lysine N-methyltransferase activity;0.029390169751805!GO:0046979;TAP2 binding;0.0300618683359674!GO:0046977;TAP binding;0.0300618683359674!GO:0046978;TAP1 binding;0.0300618683359674!GO:0031988;membrane-bound vesicle;0.0301952471573946!GO:0016859;cis-trans isomerase activity;0.0308118019562931!GO:0030145;manganese ion binding;0.031000458230169!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0313238121019663!GO:0016788;hydrolase activity, acting on ester bonds;0.0313238121019663!GO:0051087;chaperone binding;0.0321543665571925!GO:0006470;protein amino acid dephosphorylation;0.0322297414437008!GO:0019900;kinase binding;0.0322600911183384!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0336787224761794!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0336787224761794!GO:0045185;maintenance of protein localization;0.0336787224761794!GO:0000776;kinetochore;0.0338169216528241!GO:0006406;mRNA export from nucleus;0.0338537500873803!GO:0019210;kinase inhibitor activity;0.0339926508187178!GO:0006289;nucleotide-excision repair;0.0341717377818671!GO:0031901;early endosome membrane;0.035074992758349!GO:0022406;membrane docking;0.035074992758349!GO:0048278;vesicle docking;0.035074992758349!GO:0051540;metal cluster binding;0.035074992758349!GO:0051536;iron-sulfur cluster binding;0.035074992758349!GO:0042608;T cell receptor binding;0.0355138308870543!GO:0042288;MHC class I protein binding;0.0357350398048495!GO:0006278;RNA-dependent DNA replication;0.0364389100081272!GO:0008250;oligosaccharyl transferase complex;0.0374543799231284!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0376569349415221!GO:0006268;DNA unwinding during replication;0.0376569349415221!GO:0008097;5S rRNA binding;0.0376577119106805!GO:0044438;microbody part;0.0377988235982839!GO:0044439;peroxisomal part;0.0377988235982839!GO:0050871;positive regulation of B cell activation;0.0380384278001057!GO:0045815;positive regulation of gene expression, epigenetic;0.0380412729765738!GO:0008536;Ran GTPase binding;0.0386094826450186!GO:0031410;cytoplasmic vesicle;0.0387308992366757!GO:0030137;COPI-coated vesicle;0.0387411566463406!GO:0006904;vesicle docking during exocytosis;0.0387979180465252!GO:0042809;vitamin D receptor binding;0.0392034722890663!GO:0031325;positive regulation of cellular metabolic process;0.0392034722890663!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0396478687300338!GO:0035026;leading edge cell differentiation;0.0401782554258683!GO:0050870;positive regulation of T cell activation;0.040457066974098!GO:0030433;ER-associated protein catabolic process;0.040457066974098!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.040457066974098!GO:0031098;stress-activated protein kinase signaling pathway;0.0407509476331295!GO:0031124;mRNA 3'-end processing;0.041066387552335!GO:0050865;regulation of cell activation;0.0413147197521346!GO:0051249;regulation of lymphocyte activation;0.0413147197521346!GO:0051457;maintenance of protein localization in nucleus;0.0419552080357892!GO:0019079;viral genome replication;0.0419552080357892!GO:0016455;RNA polymerase II transcription mediator activity;0.042043429068068!GO:0031647;regulation of protein stability;0.042118057442147!GO:0032318;regulation of Ras GTPase activity;0.0421273161251906!GO:0030041;actin filament polymerization;0.0421273161251906!GO:0006013;mannose metabolic process;0.0424079883210894!GO:0030833;regulation of actin filament polymerization;0.042480661163091!GO:0004860;protein kinase inhibitor activity;0.042796765671756!GO:0000188;inactivation of MAPK activity;0.0432570766103008!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.043442223684271!GO:0015002;heme-copper terminal oxidase activity;0.043442223684271!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.043442223684271!GO:0004129;cytochrome-c oxidase activity;0.043442223684271!GO:0035035;histone acetyltransferase binding;0.043442223684271!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0436748181351791!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0436748181351791!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0436748181351791!GO:0000159;protein phosphatase type 2A complex;0.0437109720415133!GO:0008180;signalosome;0.0437109720415133!GO:0005099;Ras GTPase activator activity;0.0442130403303837!GO:0000303;response to superoxide;0.0442130403303837!GO:0004532;exoribonuclease activity;0.0448036477167565!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0448036477167565!GO:0046578;regulation of Ras protein signal transduction;0.0462485206703585!GO:0006914;autophagy;0.0463213856446298!GO:0030663;COPI coated vesicle membrane;0.0465538002619697!GO:0030126;COPI vesicle coat;0.0465538002619697!GO:0045926;negative regulation of growth;0.0470728353355086!GO:0005095;GTPase inhibitor activity;0.0470728353355086!GO:0032507;maintenance of cellular protein localization;0.0472175574938359!GO:0043284;biopolymer biosynthetic process;0.0474808771404131!GO:0030217;T cell differentiation;0.047759856285962!GO:0000738;DNA catabolic process, exonucleolytic;0.0480738629964267!GO:0030867;rough endoplasmic reticulum membrane;0.0480738629964267!GO:0045746;negative regulation of Notch signaling pathway;0.0481873204032333!GO:0006506;GPI anchor biosynthetic process;0.0489653407415083!GO:0042054;histone methyltransferase activity;0.0491990209408912!GO:0009117;nucleotide metabolic process;0.0498214395146236 | |||
|sample_id=11383 | |sample_id=11383 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=CREB1:3.46222564936;PITX1..3:3.30466926124;PAX3,7:3.27961748556;ATF4:3.20484874129;FOXO1,3,4:3.07642937861;ATF5_CREB3:3.00115013965;FOX{D1,D2}:2.98004043043;RFX2..5_RFXANK_RFXAP:2.94416828626;FOXP1:2.83490443307;RUNX1..3:2.72728686831;BPTF:2.62582209069;ZBTB16:2.62422514558;T:2.60401448267;RORA:2.56869680865;TOPORS:2.49724597986;FOXN1:2.41263718984;RFX1:2.21779546141;ELF1,2,4:2.121852489;IKZF2:2.00906684725;PAX2:2.00186258655;NFKB1_REL_RELA:1.95587400613;FOX{F1,F2,J1}:1.85805219767;JUN:1.81964591573;NKX6-1,2:1.80026696918;DMAP1_NCOR{1,2}_SMARC:1.78014497955;ETS1,2:1.68510708528;HMX1:1.62722296133;PAX4:1.47726491444;BREu{core}:1.46733490876;SPI1:1.44345208679;CDX1,2,4:1.36893468384;HIF1A:1.32547077118;TGIF1:1.25074951183;LEF1_TCF7_TCF7L1,2:1.23673934492;NKX2-1,4:1.23339528901;TBX4,5:1.21950202297;PPARG:1.16925211852;ATF2:1.15846324942;ATF6:1.06764279251;IRF1,2:1.06679872744;TLX2:1.01242884689;ZNF384:0.957258485388;FOX{I1,J2}:0.941093945196;SPIB:0.845834526744;EGR1..3:0.785026902992;HOX{A6,A7,B6,B7}:0.635549598996;ELK1,4_GABP{A,B1}:0.626237548579;HBP1_HMGB_SSRP1_UBTF:0.621173936622;AIRE:0.594857484399;RREB1:0.573959955925;GATA6:0.516204664221;PAX6:0.497627420136;CUX2:0.404537991056;SOX2:0.359603700641;MYB:0.332461300799;NANOG{mouse}:0.31919560715;SREBF1,2:0.25285264172;EP300:0.248225736647;HMGA1,2:0.234651126365;TFDP1:0.223552320197;SMAD1..7,9:0.211015171362;MAFB:0.188799966434;PDX1:0.172065742278;AHR_ARNT_ARNT2:0.171925644279;FOSL2:0.159540726404;ZEB1:0.158130674372;NFIL3:0.120861502534;SNAI1..3:0.0854797038154;IRF7:0.0799049240556;NKX3-1:0.0775255024293;SOX5:0.0312573851393;FOS_FOS{B,L1}_JUN{B,D}:0.0130737933113;FOXD3:-0.0147449888108;EVI1:-0.0712398640398;MYFfamily:-0.137395572844;NFY{A,B,C}:-0.159469256283;PBX1:-0.161077985572;NFIX:-0.165429565373;NFATC1..3:-0.180662136186;BACH2:-0.208689956262;SPZ1:-0.213424497925;POU2F1..3:-0.236859076398;FOXL1:-0.244720592627;NFE2L1:-0.244742845977;NRF1:-0.256291399274;NR5A1,2:-0.266003700384;MTE{core}:-0.277078072171;POU1F1:-0.279330898843;STAT2,4,6:-0.30593207811;RXRA_VDR{dimer}:-0.315363039612;HES1:-0.320246511364;NFE2:-0.333375837257;MED-1{core}:-0.337289040553;PRRX1,2:-0.344187000458;E2F1..5:-0.387203241355;STAT5{A,B}:-0.4094284229;ZFP161:-0.420175610066;YY1:-0.422628960555;FOXP3:-0.429928591777;AR:-0.437411982643;CEBPA,B_DDIT3:-0.446836749899;HNF4A_NR2F1,2:-0.455116428628;ALX4:-0.468343757762;FOXA2:-0.478941400498;LMO2:-0.484038016232;MTF1:-0.50885060994;MYOD1:-0.511262909498;PAX5:-0.538500276452;SRF:-0.580837146367;TFAP2B:-0.60960474574;PATZ1:-0.61683444164;HOXA9_MEIS1:-0.621092191067;CRX:-0.622017921658;GCM1,2:-0.626642993076;OCT4_SOX2{dimer}:-0.634888230412;HNF1A:-0.688670433913;TAL1_TCF{3,4,12}:-0.704409026986;GLI1..3:-0.740910926525;FOXQ1:-0.7421352698;HLF:-0.7467470233;FOXM1:-0.769855613378;NANOG:-0.771076195871;TFAP4:-0.780918859612;bHLH_family:-0.787177064686;SOX{8,9,10}:-0.78735203254;RBPJ:-0.803864930258;MZF1:-0.804037358829;ZNF423:-0.8119803865;DBP:-0.825318554796;ZBTB6:-0.837569060957;REST:-0.845681309938;NHLH1,2:-0.879237594845;NKX2-2,8:-0.889945525131;NFE2L2:-0.898602522295;MAZ:-0.931844573416;ZNF143:-0.943606204591;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.949173318084;TEF:-0.968291721428;TFAP2{A,C}:-0.969091354548;GATA4:-0.970517497996;ZIC1..3:-1.00329925076;XBP1:-1.04003784052;STAT1,3:-1.05672211978;SOX17:-1.06947395186;NR1H4:-1.08502967794;POU6F1:-1.08842119064;UFEwm:-1.09697376682;MEF2{A,B,C,D}:-1.11033906565;SP1:-1.14288897597;TFCP2:-1.1477525823;HIC1:-1.18495223891;POU3F1..4:-1.21502088528;ZNF148:-1.24299938218;HAND1,2:-1.27431375773;GFI1:-1.32898156763;CDC5L:-1.36742463323;ONECUT1,2:-1.37038072576;LHX3,4:-1.39625108368;XCPE1{core}:-1.4141529815;MYBL2:-1.42625793415;HOX{A5,B5}:-1.43381301263;ARID5B:-1.4541462114;TP53:-1.46927264351;HSF1,2:-1.47456152122;ALX1:-1.47495942817;GFI1B:-1.53864664545;EN1,2:-1.54167449729;RXR{A,B,G}:-1.55916436564;PAX8:-1.56789393649;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.57952637725;TBP:-1.59351012169;ZNF238:-1.60232684837;NR6A1:-1.65675107175;GTF2A1,2:-1.66088379805;GTF2I:-1.73196438948;POU5F1:-1.73400545439;TLX1..3_NFIC{dimer}:-1.76759514399;VSX1,2:-1.78340566456;NKX2-3_NKX2-5:-1.78870365568;GZF1:-1.822157066;HOX{A4,D4}:-1.82949154843;TEAD1:-1.85916374604;PRDM1:-1.99397359301;ESRRA:-2.05977457552;ADNP_IRX_SIX_ZHX:-2.13773944033;KLF4:-2.20112395912;ESR1:-2.33210553668;EBF1:-2.34635841911;PAX1,9:-2.41887920264;NKX3-2:-2.57395824644;IKZF1:-2.67475814541;NR3C1:-2.96335982939 | |top_motifs=CREB1:3.46222564936;PITX1..3:3.30466926124;PAX3,7:3.27961748556;ATF4:3.20484874129;FOXO1,3,4:3.07642937861;ATF5_CREB3:3.00115013965;FOX{D1,D2}:2.98004043043;RFX2..5_RFXANK_RFXAP:2.94416828626;FOXP1:2.83490443307;RUNX1..3:2.72728686831;BPTF:2.62582209069;ZBTB16:2.62422514558;T:2.60401448267;RORA:2.56869680865;TOPORS:2.49724597986;FOXN1:2.41263718984;RFX1:2.21779546141;ELF1,2,4:2.121852489;IKZF2:2.00906684725;PAX2:2.00186258655;NFKB1_REL_RELA:1.95587400613;FOX{F1,F2,J1}:1.85805219767;JUN:1.81964591573;NKX6-1,2:1.80026696918;DMAP1_NCOR{1,2}_SMARC:1.78014497955;ETS1,2:1.68510708528;HMX1:1.62722296133;PAX4:1.47726491444;BREu{core}:1.46733490876;SPI1:1.44345208679;CDX1,2,4:1.36893468384;HIF1A:1.32547077118;TGIF1:1.25074951183;LEF1_TCF7_TCF7L1,2:1.23673934492;NKX2-1,4:1.23339528901;TBX4,5:1.21950202297;PPARG:1.16925211852;ATF2:1.15846324942;ATF6:1.06764279251;IRF1,2:1.06679872744;TLX2:1.01242884689;ZNF384:0.957258485388;FOX{I1,J2}:0.941093945196;SPIB:0.845834526744;EGR1..3:0.785026902992;HOX{A6,A7,B6,B7}:0.635549598996;ELK1,4_GABP{A,B1}:0.626237548579;HBP1_HMGB_SSRP1_UBTF:0.621173936622;AIRE:0.594857484399;RREB1:0.573959955925;GATA6:0.516204664221;PAX6:0.497627420136;CUX2:0.404537991056;SOX2:0.359603700641;MYB:0.332461300799;NANOG{mouse}:0.31919560715;SREBF1,2:0.25285264172;EP300:0.248225736647;HMGA1,2:0.234651126365;TFDP1:0.223552320197;SMAD1..7,9:0.211015171362;MAFB:0.188799966434;PDX1:0.172065742278;AHR_ARNT_ARNT2:0.171925644279;FOSL2:0.159540726404;ZEB1:0.158130674372;NFIL3:0.120861502534;SNAI1..3:0.0854797038154;IRF7:0.0799049240556;NKX3-1:0.0775255024293;SOX5:0.0312573851393;FOS_FOS{B,L1}_JUN{B,D}:0.0130737933113;FOXD3:-0.0147449888108;EVI1:-0.0712398640398;MYFfamily:-0.137395572844;NFY{A,B,C}:-0.159469256283;PBX1:-0.161077985572;NFIX:-0.165429565373;NFATC1..3:-0.180662136186;BACH2:-0.208689956262;SPZ1:-0.213424497925;POU2F1..3:-0.236859076398;FOXL1:-0.244720592627;NFE2L1:-0.244742845977;NRF1:-0.256291399274;NR5A1,2:-0.266003700384;MTE{core}:-0.277078072171;POU1F1:-0.279330898843;STAT2,4,6:-0.30593207811;RXRA_VDR{dimer}:-0.315363039612;HES1:-0.320246511364;NFE2:-0.333375837257;MED-1{core}:-0.337289040553;PRRX1,2:-0.344187000458;E2F1..5:-0.387203241355;STAT5{A,B}:-0.4094284229;ZFP161:-0.420175610066;YY1:-0.422628960555;FOXP3:-0.429928591777;AR:-0.437411982643;CEBPA,B_DDIT3:-0.446836749899;HNF4A_NR2F1,2:-0.455116428628;ALX4:-0.468343757762;FOXA2:-0.478941400498;LMO2:-0.484038016232;MTF1:-0.50885060994;MYOD1:-0.511262909498;PAX5:-0.538500276452;SRF:-0.580837146367;TFAP2B:-0.60960474574;PATZ1:-0.61683444164;HOXA9_MEIS1:-0.621092191067;CRX:-0.622017921658;GCM1,2:-0.626642993076;OCT4_SOX2{dimer}:-0.634888230412;HNF1A:-0.688670433913;TAL1_TCF{3,4,12}:-0.704409026986;GLI1..3:-0.740910926525;FOXQ1:-0.7421352698;HLF:-0.7467470233;FOXM1:-0.769855613378;NANOG:-0.771076195871;TFAP4:-0.780918859612;bHLH_family:-0.787177064686;SOX{8,9,10}:-0.78735203254;RBPJ:-0.803864930258;MZF1:-0.804037358829;ZNF423:-0.8119803865;DBP:-0.825318554796;ZBTB6:-0.837569060957;REST:-0.845681309938;NHLH1,2:-0.879237594845;NKX2-2,8:-0.889945525131;NFE2L2:-0.898602522295;MAZ:-0.931844573416;ZNF143:-0.943606204591;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.949173318084;TEF:-0.968291721428;TFAP2{A,C}:-0.969091354548;GATA4:-0.970517497996;ZIC1..3:-1.00329925076;XBP1:-1.04003784052;STAT1,3:-1.05672211978;SOX17:-1.06947395186;NR1H4:-1.08502967794;POU6F1:-1.08842119064;UFEwm:-1.09697376682;MEF2{A,B,C,D}:-1.11033906565;SP1:-1.14288897597;TFCP2:-1.1477525823;HIC1:-1.18495223891;POU3F1..4:-1.21502088528;ZNF148:-1.24299938218;HAND1,2:-1.27431375773;GFI1:-1.32898156763;CDC5L:-1.36742463323;ONECUT1,2:-1.37038072576;LHX3,4:-1.39625108368;XCPE1{core}:-1.4141529815;MYBL2:-1.42625793415;HOX{A5,B5}:-1.43381301263;ARID5B:-1.4541462114;TP53:-1.46927264351;HSF1,2:-1.47456152122;ALX1:-1.47495942817;GFI1B:-1.53864664545;EN1,2:-1.54167449729;RXR{A,B,G}:-1.55916436564;PAX8:-1.56789393649;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.57952637725;TBP:-1.59351012169;ZNF238:-1.60232684837;NR6A1:-1.65675107175;GTF2A1,2:-1.66088379805;GTF2I:-1.73196438948;POU5F1:-1.73400545439;TLX1..3_NFIC{dimer}:-1.76759514399;VSX1,2:-1.78340566456;NKX2-3_NKX2-5:-1.78870365568;GZF1:-1.822157066;HOX{A4,D4}:-1.82949154843;TEAD1:-1.85916374604;PRDM1:-1.99397359301;ESRRA:-2.05977457552;ADNP_IRX_SIX_ZHX:-2.13773944033;KLF4:-2.20112395912;ESR1:-2.33210553668;EBF1:-2.34635841911;PAX1,9:-2.41887920264;NKX3-2:-2.57395824644;IKZF1:-2.67475814541;NR3C1:-2.96335982939 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11383-118B6;search_select_hide=table117:FF:11383-118B6 | |||
}} | }} | ||
Latest revision as of 17:56, 4 June 2020
| Name: | CD8+ T Cells, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11999,SRhi10011.GTGAAA |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11999
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11999
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.982 |
| 10 | 10 | 0.0123 |
| 100 | 100 | 0.695 |
| 101 | 101 | 0.153 |
| 102 | 102 | 0.782 |
| 103 | 103 | 0.127 |
| 104 | 104 | 0.941 |
| 105 | 105 | 0.774 |
| 106 | 106 | 0.47 |
| 107 | 107 | 0.0196 |
| 108 | 108 | 0.636 |
| 109 | 109 | 0.882 |
| 11 | 11 | 0.864 |
| 110 | 110 | 0.37 |
| 111 | 111 | 0.578 |
| 112 | 112 | 0.643 |
| 113 | 113 | 0.243 |
| 114 | 114 | 0.855 |
| 115 | 115 | 0.415 |
| 116 | 116 | 0.196 |
| 117 | 117 | 0.00834 |
| 118 | 118 | 0.505 |
| 119 | 119 | 0.388 |
| 12 | 12 | 0.727 |
| 120 | 120 | 0.254 |
| 121 | 121 | 0.662 |
| 122 | 122 | 0.768 |
| 123 | 123 | 7.15152e-7 |
| 124 | 124 | 0.963 |
| 125 | 125 | 0.689 |
| 126 | 126 | 0.976 |
| 127 | 127 | 0.456 |
| 128 | 128 | 0.874 |
| 129 | 129 | 0.274 |
| 13 | 13 | 0.561 |
| 130 | 130 | 0.202 |
| 131 | 131 | 0.263 |
| 132 | 132 | 0.351 |
| 133 | 133 | 0.998 |
| 134 | 134 | 0.767 |
| 135 | 135 | 0.161 |
| 136 | 136 | 0.924 |
| 137 | 137 | 0.0897 |
| 138 | 138 | 0.774 |
| 139 | 139 | 0.17 |
| 14 | 14 | 0.579 |
| 140 | 140 | 0.418 |
| 141 | 141 | 0.919 |
| 142 | 142 | 0.23 |
| 143 | 143 | 0.0751 |
| 144 | 144 | 0.992 |
| 145 | 145 | 0.522 |
| 146 | 146 | 0.442 |
| 147 | 147 | 0.0233 |
| 148 | 148 | 0.508 |
| 149 | 149 | 0.141 |
| 15 | 15 | 0.528 |
| 150 | 150 | 0.806 |
| 151 | 151 | 0.557 |
| 152 | 152 | 0.533 |
| 153 | 153 | 0.508 |
| 154 | 154 | 0.106 |
| 155 | 155 | 0.115 |
| 156 | 156 | 0.859 |
| 157 | 157 | 0.899 |
| 158 | 158 | 0.00603 |
| 159 | 159 | 0.864 |
| 16 | 16 | 0.2 |
| 160 | 160 | 0.0631 |
| 161 | 161 | 0.526 |
| 162 | 162 | 0.0802 |
| 163 | 163 | 0.622 |
| 164 | 164 | 0.0967 |
| 165 | 165 | 0.838 |
| 166 | 166 | 0.455 |
| 167 | 167 | 0.124 |
| 168 | 168 | 0.384 |
| 169 | 169 | 0.154 |
| 17 | 17 | 0.554 |
| 18 | 18 | 0.403 |
| 19 | 19 | 0.0259 |
| 2 | 2 | 0.132 |
| 20 | 20 | 0.105 |
| 21 | 21 | 0.758 |
| 22 | 22 | 0.144 |
| 23 | 23 | 0.417 |
| 24 | 24 | 0.379 |
| 25 | 25 | 0.245 |
| 26 | 26 | 0.817 |
| 27 | 27 | 0.442 |
| 28 | 28 | 0.428 |
| 29 | 29 | 0.167 |
| 3 | 3 | 0.63 |
| 30 | 30 | 0.0426 |
| 31 | 31 | 0.508 |
| 32 | 32 | 0.00827 |
| 33 | 33 | 0.62 |
| 34 | 34 | 0.299 |
| 35 | 35 | 0.387 |
| 36 | 36 | 0.15 |
| 37 | 37 | 0.634 |
| 38 | 38 | 0.613 |
| 39 | 39 | 0.373 |
| 4 | 4 | 0.956 |
| 40 | 40 | 0.769 |
| 41 | 41 | 0.272 |
| 42 | 42 | 0.384 |
| 43 | 43 | 0.882 |
| 44 | 44 | 0.504 |
| 45 | 45 | 0.0932 |
| 46 | 46 | 0.873 |
| 47 | 47 | 0.747 |
| 48 | 48 | 0.951 |
| 49 | 49 | 0.263 |
| 5 | 5 | 0.874 |
| 50 | 50 | 0.473 |
| 51 | 51 | 0.794 |
| 52 | 52 | 0.736 |
| 53 | 53 | 0.181 |
| 54 | 54 | 0.83 |
| 55 | 55 | 0.729 |
| 56 | 56 | 0.737 |
| 57 | 57 | 0.953 |
| 58 | 58 | 0.243 |
| 59 | 59 | 0.138 |
| 6 | 6 | 0.967 |
| 60 | 60 | 0.768 |
| 61 | 61 | 0.277 |
| 62 | 62 | 0.466 |
| 63 | 63 | 0.798 |
| 64 | 64 | 0.994 |
| 65 | 65 | 0.389 |
| 66 | 66 | 0.47 |
| 67 | 67 | 0.52 |
| 68 | 68 | 0.899 |
| 69 | 69 | 0.975 |
| 7 | 7 | 0.812 |
| 70 | 70 | 0.273 |
| 71 | 71 | 0.427 |
| 72 | 72 | 0.596 |
| 73 | 73 | 0.983 |
| 74 | 74 | 0.428 |
| 75 | 75 | 0.0725 |
| 76 | 76 | 0.0718 |
| 77 | 77 | 0.00251 |
| 78 | 78 | 0.891 |
| 79 | 79 | 0.772 |
| 8 | 8 | 0.291 |
| 80 | 80 | 0.154 |
| 81 | 81 | 0.889 |
| 82 | 82 | 0.631 |
| 83 | 83 | 0.883 |
| 84 | 84 | 0.107 |
| 85 | 85 | 0.917 |
| 86 | 86 | 0.102 |
| 87 | 87 | 0.559 |
| 88 | 88 | 0.986 |
| 89 | 89 | 0.00122 |
| 9 | 9 | 0.488 |
| 90 | 90 | 0.57 |
| 91 | 91 | 0.971 |
| 92 | 92 | 0.749 |
| 93 | 93 | 0.833 |
| 94 | 94 | 0.52 |
| 95 | 95 | 0.305 |
| 96 | 96 | 0.805 |
| 97 | 97 | 0.186 |
| 98 | 98 | 0.55 |
| 99 | 99 | 2.50252e-5 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11999
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000030 CD8-positive T cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)
