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{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@SAMD00005837
|accession_numbers=CAGE;DRX008168;DRR009040;DRZ000465;DRZ001850;DRZ011815;DRZ013200
|ancestors_in_anatomy_facet=
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000875,CL:0002396
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000875,CL:0002396
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|created_by=
|created_by=
|creation_date=
|creation_date=
|datafreeze_phase=1
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr11:47400078..47400106,-!p1@SPI1!2.67!466.46!SPI1;;chr2:68592406..68592424,+!p1@PLEK!2.61!407.98!PLEK;;chr7:50344289..50344323,+!p1@IKZF1!2.07!117.56!IKZF1;;chr11:47399947..47399961,-!p3@SPI1!2.06!112.59!SPI1;;chr11:47400062..47400077,-!p2@SPI1!1.96!89.31!SPI1;;chr16:85932760..85932775,+!p1@IRF8!1.83!66.84!IRF8;;chr12:54778351..54778378,-!p6@ZNF385A!1.81!64.25!ZNF385A;;chr19:13213662..13213686,-!p1@LYL1!1.77!84.74!LYL1;;chr21:34442439..34442455,+!p1@OLIG1!1.75!54.90!OLIG1;;chr5:176735063..176735088,-!p2@MXD3!1.71!49.93!MXD3;;chr2:145277640..145277771,-!p1@ZEB2!1.67!586.21!ZEB2;;chr11:47399996..47400014,-!p4@SPI1!1.67!45.95!SPI1;;chr20:39317868..39317884,-!p1@MAFB!1.66!503.26!MAFB;;chr11:47399920..47399931,-!p7@SPI1!1.63!41.57!SPI1;;chr21:34442540..34442560,+!p2@OLIG1!1.63!41.37!OLIG1;;chr19:33793430..33793447,-!p1@CEBPA!1.62!163.11!CEBPA;;chr11:47400032..47400043,-!p5@SPI1!1.62!40.58!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!1.57!35.81!ZNF385A;;chrX:106960180..106960197,-!p2@TSC22D3!1.55!127.90!TSC22D3;;chr19:16435625..16435682,+!p1@KLF2!1.49!913.82!KLF2;;chr11:47400045..47400060,-!p6@SPI1!1.49!29.64!SPI1;;chr1:25256756..25256774,-!p1@RUNX3!1.44!49.13!RUNX3;;chr19:42636586..42636607,-!p1@POU2F2!1.42!67.63!POU2F2;;chr7:128577972..128578047,+!p1@IRF5!1.42!38.99!IRF5;;chr5:88178983..88179012,-!p1@MEF2C!1.41!184.99!MEF2C;;chr1:212873084..212873137,-!p2@BATF3!1.41!24.47!BATF3;;chr9:110252035..110252057,-!p1@KLF4!1.33!315.28!KLF4;;chr14:75745523..75745537,+!p1@FOS!1.32!2285.75!FOS;;chr3:101568349..101568365,+!p1@NFKBIZ!1.32!995.18!NFKBIZ;;chr10:114710098..114710130,+!p2@TCF7L2!1.32!145.21!TCF7L2;;chr10:94449703..94449718,+!p1@HHEX!1.31!74.39!HHEX;;chr2:68592394..68592405,+!p2@PLEK!1.31!19.29!PLEK;;chr9:110250697..110250738,-!p2@KLF4!1.30!22.28!KLF4;;chr10:51572408..51572454,+!p3@NCOA4!1.29!106.82!NCOA4;;chrX:106960221..106960236,-!p3@TSC22D3!1.29!50.52!TSC22D3;;chr7:50343634..50343717,+!p2@IKZF1!1.29!18.70!IKZF1;;chrX:106960249..106960260,-!p5@TSC22D3!1.27!27.85!TSC22D3;;chrY:21906594..21906622,-!p1@KDM5D!1.27!17.70!KDM5D;;chr2:231090433..231090469,+!p1@SP140!1.27!17.50!SP140;;chr10:114709999..114710031,+!p1@TCF7L2!1.24!378.54!TCF7L2;;chr11:128563948..128564003,+!p1@FLI1!1.24!192.95!FLI1;;chrX:106960285..106960299,-!p1@TSC22D3!1.22!405.39!TSC22D3;;chr1:935467..935484,-!p1@HES4!1.20!64.65!HES4;;chr1:25256439..25256476,-!p3@RUNX3!1.20!14.72!RUNX3;;chr2:28618532..28618610,+!p4@FOSL2!1.19!24.67!FOSL2;;chr12:72056800..72056834,+!p1@THAP2!1.18!19.10!THAP2;;chr2:145271342..145271377,-!p5@ZEB2!1.18!14.12!ZEB2;;chr10:3827371..3827386,-!p2@KLF6!1.17!115.37!KLF6;;chr20:48807456..48807475,+!p3@CEBPB!1.17!26.65!CEBPB;;chr2:208394817..208394834,+!p3@CREB1!1.16!53.51!CREB1;;chr19:12902289..12902307,+!p1@JUNB!1.14!2910.55!JUNB;;chr12:52445218..52445237,+!p1@NR4A1!1.13!155.95!NR4A1;;chr13:41593425..41593480,-!p1@ELF1!1.13!79.17!ELF1;;chr12:54694758..54694805,-!p1@NFE2!1.12!14.92!NFE2;;chr10:114710244..114710257,+!p3@TCF7L2!1.11!32.42!TCF7L2;;chr2:208031943..208031978,-!p5@KLF7!1.11!15.91!KLF7;;chr1:212873061..212873080,-!p4@BATF3!1.11!11.94!BATF3;;chr2:238600933..238600985,+!p3@LRRFIP1!1.09!61.86!LRRFIP1;;chr4:185395633..185395651,-!p2@IRF2!1.09!18.30!IRF2;;chr2:70142232..70142251,+!p1@MXD1!1.08!63.06!MXD1;;chr19:45579725..45579743,-!p1@ZNF296!1.08!49.73!ZNF296;;chr8:71316428..71316459,-!p2@NCOA2!1.05!17.11!NCOA2;;chr14:75746722..75746777,+!p2@FOS!1.05!13.13!FOS;;chr9:135854091..135854159,+!p1@GFI1B!1.05!10.34!GFI1B;;chr15:90544182..90544195,+!p7@ZNF710!1.05!10.14!ZNF710;;chr2:61108695..61108753,+!p1@REL!1.04!69.22!REL;;chr10:94449675..94449694,+!p2@HHEX!1.04!26.85!HHEX;;chr6:391743..391759,+!p1@IRF4!1.03!9.75!IRF4;;chr19:45971246..45971265,+!p1@FOSB!1.02!181.01!FOSB;;chr9:137217986..137218049,+!p3@RXRA!1.02!27.65!RXRA;;chr4:38665810..38665827,+!p1@KLF3!1.01!138.25!KLF3;;chr7:77428066..77428132,+!p2@PHTF2!1.01!60.47!PHTF2;;chr10:114710060..114710069,+!p5@TCF7L2!1.01!15.91!TCF7L2;;chrY:2803415..2803468,+!p1@ZFY!1.01!9.35!ZFY;;chr21:30671690..30671762,+!p2@BACH1!1.00!31.23!BACH1;;chr7:50344251..50344288,+!p3@IKZF1!1.00!8.95!IKZF1;;chr1:935398..935465,-!p2@HES4!0.99!18.50!HES4;;chr6:144385698..144385742,-!p2@PLAGL1!0.99!10.74!PLAGL1;;chr17:38497662..38497713,+!p4@RARA!0.99!10.14!RARA;;chr5:131826457..131826514,-!p1@IRF1!0.98!345.32!IRF1;;chr4:185395191..185395226,-!p4@IRF2!0.98!12.13!IRF2;;chr7:115670804..115670825,-!p1@TFEC!0.98!8.55!TFEC;;chr8:37553292..37553317,+!p1@ZNF703!0.97!203.09!ZNF703;;chr4:185395590..185395627,-!p3@IRF2!0.97!10.54!IRF2;;chr2:231084659..231084721,-!p1@SP110!0.96!196.93!SP110;;chr21:30672433..30672464,+!p6@BACH1!0.96!8.16!BACH1;;chr10:135044190..135044229,+!p3@UTF1!0.96!8.16!UTF1;;chr4:106068026..106068084,+!p1@TET2!0.94!72.41!TET2;;chr14:45722360..45722415,-!p1@MIS18BP1!0.93!121.34!MIS18BP1;;chr10:35416142..35416169,+!p3@CREM!0.93!20.49!CREM;;chr10:114710218..114710229,+!p4@TCF7L2!0.93!15.12!TCF7L2;;chr1:158978768..158978800,+!p8@IFI16!0.93!7.56!IFI16;;chr9:110252074..110252079,-!p3@KLF4!0.92!12.33!KLF4;;chr2:231090471..231090504,+!p2@SP140!0.92!7.36!SP140;;chr4:38665769..38665801,+!p2@KLF3!0.91!67.43!KLF3;;chr9:110251836..110251887,-!p4@KLF4!0.91!9.55!KLF4;;chr19:42627037..42627084,-!p3@POU2F2!0.91!7.16!POU2F2;;chr9:117150254..117150271,-!p1@AKNA!0.90!19.89!AKNA;;chr20:48807615..48807644,+!p6@CEBPB!0.90!11.74!CEBPB;;chr20:48807430..48807439,+!p8@CEBPB!0.90!10.74!CEBPB;;chr18:51751066..51751077,-!p6@MBD2!0.90!10.74!MBD2;;chr17:38498402..38498445,+!p3@RARA!0.89!25.46!RARA;;chr20:48807351..48807384,+!p1@CEBPB!0.88!717.09!CEBPB;;chrX:129244454..129244488,-!p1@ELF4!0.88!50.72!ELF4;;chr2:157189180..157189290,-!p1@NR4A2!0.88!36.20!NR4A2;;chr5:88179017..88179046,-!p2@MEF2C!0.88!27.85!MEF2C;;chr21:30671235..30671253,+!p1@BACH1!0.87!86.13!BACH1;;chr1:161014760..161014788,-!p4@USF1!0.86!6.17!USF1;;chr22:21771656..21771662,+!p1@HIC2!0.86!6.17!HIC2;;chr19:16435735..16435773,+!p4@KLF2!0.86!6.17!KLF2;;chr10:104154246..104154347,+!p3@NFKB2!0.85!39.98!NFKB2;;chr19:49140609..49140643,-!p1@DBP!0.85!36.40!DBP;;chr17:38256799..38256815,-!p3@NR1D1!0.85!11.34!NR1D1;;chr1:935496..935509,-!p3@HES4!0.85!9.55!HES4;;chr16:31885093..31885165,+!p1@ZNF267!0.84!96.28!ZNF267;;chr10:114710083..114710092,+!p8@TCF7L2!0.84!8.16!TCF7L2;;chr2:238600998..238601013,+!p5@LRRFIP1!0.84!5.97!LRRFIP1;;chrX:129244840..129244881,-!p2@ELF4!0.83!23.47!ELF4;;chr5:172483347..172483407,+!p1@C5orf41!0.82!45.15!CREBRF;;chr11:615942..615957,-!p1@IRF7!0.81!55.70!IRF7;;chr8:48650697..48650708,-!p2@CEBPD!0.81!45.15!CEBPD;;chr17:38498594..38498661,+!p2@RARA!0.81!19.69!RARA;;chr14:64971288..64971316,-!p2@ZBTB25!0.81!17.90!ZBTB25;;chr12:72056773..72056796,+!p3@THAP2!0.81!7.36!THAP2;;chr18:51750948..51751059,-!p1@MBD2!0.80!183.20!MBD2;;chr9:88969303..88969335,-!p1@ZCCHC6!0.80!53.71!ZCCHC6;;chr17:40440481..40440550,+!p1@STAT5A!0.80!41.77!STAT5A;;chr2:157198916..157198978,-!p2@NR4A2!0.80!20.09!NR4A2;;chr18:77155922..77155939,+!p1@NFATC1!0.80!15.32!NFATC1;;chr2:176033066..176033087,-!p2@ATF2!0.80!6.96!ATF2;;chr6:44355499..44355514,+!p3@CDC5L!0.80!5.97!CDC5L;;chrX:70712265..70712303,+!p4@TAF1!0.80!5.37!TAF1;;chr2:145275982..145276003,-!p7@ZEB2!0.80!5.37!ZEB2;;chr10:114886551..114886601,+!p11@TCF7L2!0.80!5.37!TCF7L2;;chr6:12011943..12012015,+!p2@HIVEP1!0.79!17.90!HIVEP1;;chr1:158979872..158979898,+!p3@IFI16!0.79!16.91!IFI16;;chr18:42260030..42260055,+!p3@SETBP1!0.79!6.56!SETBP1;;chr8:71316021..71316068,-!p1@NCOA2!0.78!51.12!NCOA2;;chr3:150126904..150126958,+!p7@TSC22D2!0.78!9.15!TSC22D2;;chr19:13213954..13214021,-!p4@LYL1!0.78!4.97!LYL1;;chr6:170862932..170862947,+!p5@TBP!0.78!4.97!TBP;;chr6:130339710..130339745,+!p1@L3MBTL3!0.77!42.37!L3MBTL3;;chr3:39195075..39195088,-!p1@CSRNP1!0.77!33.82!CSRNP1;;chr6:28092375..28092412,+!p1@ZSCAN16!0.77!22.48!ZSCAN16;;chr5:142782823..142782854,-!p3@NR3C1!0.77!7.16!NR3C1;;chr2:10183651..10183713,+!p1@KLF11!0.76!37.99!KLF11;;chr2:61108808..61108821,+!p3@REL!0.76!6.17!REL;;chr2:60780607..60780624,-!p2@BCL11A!0.75!15.32!BCL11A;;chr16:3313791..3313834,+!p2@ZNF263!0.75!10.94!ZNF263;;chr9:88969287..88969297,-!p3@ZCCHC6!0.75!6.37!ZCCHC6;;chr12:54694807..54694832,-!p3@NFE2!0.75!4.58!NFE2;;chr2:231090344..231090361,-!p3@SP110!0.75!4.58!SP110;;chr2:61108650..61108687,+!p2@REL!0.74!24.27!REL;;chr1:158979851..158979865,+!p5@IFI16!0.74!10.54!IFI16;;chr9:102584262..102584276,+!p1@NR4A3!0.73!10.54!NR4A3;;chr2:145282041..145282092,-!p8@ZEB2!0.73!6.96!ZEB2;;chr12:108154762..108154776,-!p4@PRDM4!0.73!4.38!PRDM4;;chr13:41593392..41593403,-!p7@ELF1!0.73!4.38!ELF1;;chr6:44233252..44233296,-!p1@NFKBIE!0.72!46.94!NFKBIE;;chr1:156470515..156470542,-!p2@MEF2D!0.72!24.86!MEF2D;;chr19:12405606..12405629,-!p2@ZNF44!0.72!8.95!ZNF44;;chr2:145274981..145274994,-!p9@ZEB2!0.72!6.56!ZEB2;;chr20:48807875..48807982,+!p2@CEBPB!0.71!103.24!CEBPB;;chr11:65686952..65686975,+!p5@DRAP1!0.71!25.66!DRAP1;;chr14:35872962..35873025,-!p3@NFKBIA!0.71!11.34!NFKBIA;;chr10:51572339..51572376,+!p4@NCOA4!0.71!10.14!NCOA4;;chr2:185463247..185463263,+!p1@ZNF804A!0.71!7.76!ZNF804A;;chr11:615570..615721,-!p2@IRF7!0.70!8.55!IRF7;;chr2:145277882..145277967,-!p3@ZEB2!0.70!7.36!ZEB2;;chr2:145277589..145277612,-!p12@ZEB2!0.70!3.98!ZEB2;;chr20:56195474..56195506,-!p1@ZBP1!0.70!3.98!ZBP1;;chr13:41593405..41593416,-!p9@ELF1!0.70!3.98!ELF1;;chr13:41240737..41240787,-!p1@FOXO1!0.69!52.71!FOXO1;;chr9:88969339..88969422,-!p2@ZCCHC6!0.69!34.41!ZCCHC6;;chrX:131623044..131623089,-!p1@MBNL3!0.69!18.10!MBNL3;;chr21:40177892..40177903,+!p2@ETS2!0.69!17.70!ETS2;;chr19:12075844..12075880,+!p3@ZNF763!0.69!7.16!ZNF763;;chr20:48807648..48807671,+!p9@CEBPB!0.69!5.97!CEBPB;;chr1:44679370..44679422,+!p3@DMAP1!0.69!5.37!DMAP1;;chr18:51750414..51750449,-!p5@MBD2!0.68!7.96!MBD2;;chr11:113930291..113930339,+!p2@ZBTB16!0.68!6.56!ZBTB16;;chr19:4067174..4067200,-!p9@ZBTB7A!0.68!4.77!ZBTB7A;;chr2:145274998..145275012,-!p13@ZEB2!0.68!4.38!ZEB2;;chr14:75746340..75746368,+!p3@FOS!0.68!3.78!FOS;;chrY:21906761..21906810,-!p2@KDM5D!0.68!3.78!KDM5D;;chr2:8822176..8822196,+!p1@ID2!0.67!605.10!ID2;;chr6: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|expression_enrichment_score=chr11:47400078..47400106,-!p1@SPI1!2.67!466.46!SPI1;;chr2:68592406..68592424,+!p1@PLEK!2.61!407.98!PLEK;;chr7:50344289..50344323,+!p1@IKZF1!2.07!117.56!IKZF1;;chr11:47399947..47399961,-!p3@SPI1!2.06!112.59!SPI1;;chr11:47400062..47400077,-!p2@SPI1!1.96!89.31!SPI1;;chr16:85932760..85932775,+!p1@IRF8!1.83!66.84!IRF8;;chr12:54778351..54778378,-!p6@ZNF385A!1.81!64.25!ZNF385A;;chr19:13213662..13213686,-!p1@LYL1!1.77!84.74!LYL1;;chr21:34442439..34442455,+!p1@OLIG1!1.75!54.90!OLIG1;;chr5:176735063..176735088,-!p2@MXD3!1.71!49.93!MXD3;;chr2:145277640..145277771,-!p1@ZEB2!1.67!586.21!ZEB2;;chr11:47399996..47400014,-!p4@SPI1!1.67!45.95!SPI1;;chr20:39317868..39317884,-!p1@MAFB!1.66!503.26!MAFB;;chr11:47399920..47399931,-!p7@SPI1!1.63!41.57!SPI1;;chr21:34442540..34442560,+!p2@OLIG1!1.63!41.37!OLIG1;;chr19:33793430..33793447,-!p1@CEBPA!1.62!163.11!CEBPA;;chr11:47400032..47400043,-!p5@SPI1!1.62!40.58!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!1.57!35.81!ZNF385A;;chrX:106960180..106960197,-!p2@TSC22D3!1.55!127.90!TSC22D3;;chr19:16435625..16435682,+!p1@KLF2!1.49!913.82!KLF2;;chr11:47400045..47400060,-!p6@SPI1!1.49!29.64!SPI1;;chr1:25256756..25256774,-!p1@RUNX3!1.44!49.13!RUNX3;;chr19:42636586..42636607,-!p1@POU2F2!1.42!67.63!POU2F2;;chr7:128577972..128578047,+!p1@IRF5!1.42!38.99!IRF5;;chr5:88178983..88179012,-!p1@MEF2C!1.41!184.99!MEF2C;;chr1:212873084..212873137,-!p2@BATF3!1.41!24.47!BATF3;;chr9:110252035..110252057,-!p1@KLF4!1.33!315.28!KLF4;;chr14:75745523..75745537,+!p1@FOS!1.32!2285.75!FOS;;chr3:101568349..101568365,+!p1@NFKBIZ!1.32!995.18!NFKBIZ;;chr10:114710098..114710130,+!p2@TCF7L2!1.32!145.21!TCF7L2;;chr10:94449703..94449718,+!p1@HHEX!1.31!74.39!HHEX;;chr2:68592394..68592405,+!p2@PLEK!1.31!19.29!PLEK;;chr9:110250697..110250738,-!p2@KLF4!1.30!22.28!KLF4;;chr10:51572408..51572454,+!p3@NCOA4!1.29!106.82!NCOA4;;chrX:106960221..106960236,-!p3@TSC22D3!1.29!50.52!TSC22D3;;chr7:50343634..50343717,+!p2@IKZF1!1.29!18.70!IKZF1;;chrX:106960249..106960260,-!p5@TSC22D3!1.27!27.85!TSC22D3;;chrY:21906594..21906622,-!p1@KDM5D!1.27!17.70!KDM5D;;chr2:231090433..231090469,+!p1@SP140!1.27!17.50!SP140;;chr10:114709999..114710031,+!p1@TCF7L2!1.24!378.54!TCF7L2;;chr11:128563948..128564003,+!p1@FLI1!1.24!192.95!FLI1;;chrX:106960285..106960299,-!p1@TSC22D3!1.22!405.39!TSC22D3;;chr1:935467..935484,-!p1@HES4!1.20!64.65!HES4;;chr1:25256439..25256476,-!p3@RUNX3!1.20!14.72!RUNX3;;chr2:28618532..28618610,+!p4@FOSL2!1.19!24.67!FOSL2;;chr12:72056800..72056834,+!p1@THAP2!1.18!19.10!THAP2;;chr2:145271342..145271377,-!p5@ZEB2!1.18!14.12!ZEB2;;chr10:3827371..3827386,-!p2@KLF6!1.17!115.37!KLF6;;chr20:48807456..48807475,+!p3@CEBPB!1.17!26.65!CEBPB;;chr2:208394817..208394834,+!p3@CREB1!1.16!53.51!CREB1;;chr19:12902289..12902307,+!p1@JUNB!1.14!2910.55!JUNB;;chr12:52445218..52445237,+!p1@NR4A1!1.13!155.95!NR4A1;;chr13:41593425..41593480,-!p1@ELF1!1.13!79.17!ELF1;;chr12:54694758..54694805,-!p1@NFE2!1.12!14.92!NFE2;;chr10:114710244..114710257,+!p3@TCF7L2!1.11!32.42!TCF7L2;;chr2:208031943..208031978,-!p5@KLF7!1.11!15.91!KLF7;;chr1:212873061..212873080,-!p4@BATF3!1.11!11.94!BATF3;;chr2:238600933..238600985,+!p3@LRRFIP1!1.09!61.86!LRRFIP1;;chr4:185395633..185395651,-!p2@IRF2!1.09!18.30!IRF2;;chr2:70142232..70142251,+!p1@MXD1!1.08!63.06!MXD1;;chr19:45579725..45579743,-!p1@ZNF296!1.08!49.73!ZNF296;;chr8:71316428..71316459,-!p2@NCOA2!1.05!17.11!NCOA2;;chr14:75746722..75746777,+!p2@FOS!1.05!13.13!FOS;;chr9:135854091..135854159,+!p1@GFI1B!1.05!10.34!GFI1B;;chr15:90544182..90544195,+!p7@ZNF710!1.05!10.14!ZNF710;;chr2:61108695..61108753,+!p1@REL!1.04!69.22!REL;;chr10:94449675..94449694,+!p2@HHEX!1.04!26.85!HHEX;;chr6:391743..391759,+!p1@IRF4!1.03!9.75!IRF4;;chr19:45971246..45971265,+!p1@FOSB!1.02!181.01!FOSB;;chr9:137217986..137218049,+!p3@RXRA!1.02!27.65!RXRA;;chr4:38665810..38665827,+!p1@KLF3!1.01!138.25!KLF3;;chr7:77428066..77428132,+!p2@PHTF2!1.01!60.47!PHTF2;;chr10:114710060..114710069,+!p5@TCF7L2!1.01!15.91!TCF7L2;;chrY:2803415..2803468,+!p1@ZFY!1.01!9.35!ZFY;;chr21:30671690..30671762,+!p2@BACH1!1.00!31.23!BACH1;;chr7:50344251..50344288,+!p3@IKZF1!1.00!8.95!IKZF1;;chr1:935398..935465,-!p2@HES4!0.99!18.50!HES4;;chr6:144385698..144385742,-!p2@PLAGL1!0.99!10.74!PLAGL1;;chr17:38497662..38497713,+!p4@RARA!0.99!10.14!RARA;;chr5:131826457..131826514,-!p1@IRF1!0.98!345.32!IRF1;;chr4:185395191..185395226,-!p4@IRF2!0.98!12.13!IRF2;;chr7:115670804..115670825,-!p1@TFEC!0.98!8.55!TFEC;;chr8:37553292..37553317,+!p1@ZNF703!0.97!203.09!ZNF703;;chr4:185395590..185395627,-!p3@IRF2!0.97!10.54!IRF2;;chr2:231084659..231084721,-!p1@SP110!0.96!196.93!SP110;;chr21:30672433..30672464,+!p6@BACH1!0.96!8.16!BACH1;;chr10:135044190..135044229,+!p3@UTF1!0.96!8.16!UTF1;;chr4:106068026..106068084,+!p1@TET2!0.94!72.41!TET2;;chr14:45722360..45722415,-!p1@MIS18BP1!0.93!121.34!MIS18BP1;;chr10:35416142..35416169,+!p3@CREM!0.93!20.49!CREM;;chr10:114710218..114710229,+!p4@TCF7L2!0.93!15.12!TCF7L2;;chr1:158978768..158978800,+!p8@IFI16!0.93!7.56!IFI16;;chr9:110252074..110252079,-!p3@KLF4!0.92!12.33!KLF4;;chr2:231090471..231090504,+!p2@SP140!0.92!7.36!SP140;;chr4:38665769..38665801,+!p2@KLF3!0.91!67.43!KLF3;;chr9:110251836..110251887,-!p4@KLF4!0.91!9.55!KLF4;;chr19:42627037..42627084,-!p3@POU2F2!0.91!7.16!POU2F2;;chr9:117150254..117150271,-!p1@AKNA!0.90!19.89!AKNA;;chr20:48807615..48807644,+!p6@CEBPB!0.90!11.74!CEBPB;;chr20:48807430..48807439,+!p8@CEBPB!0.90!10.74!CEBPB;;chr18:51751066..51751077,-!p6@MBD2!0.90!10.74!MBD2;;chr17:38498402..38498445,+!p3@RARA!0.89!25.46!RARA;;chr20:48807351..48807384,+!p1@CEBPB!0.88!717.09!CEBPB;;chrX:129244454..129244488,-!p1@ELF4!0.88!50.72!ELF4;;chr2:157189180..157189290,-!p1@NR4A2!0.88!36.20!NR4A2;;chr5:88179017..88179046,-!p2@MEF2C!0.88!27.85!MEF2C;;chr21:30671235..30671253,+!p1@BACH1!0.87!86.13!BACH1;;chr1:161014760..161014788,-!p4@USF1!0.86!6.17!USF1;;chr22:21771656..21771662,+!p1@HIC2!0.86!6.17!HIC2;;chr19:16435735..16435773,+!p4@KLF2!0.86!6.17!KLF2;;chr10:104154246..104154347,+!p3@NFKB2!0.85!39.98!NFKB2;;chr19:49140609..49140643,-!p1@DBP!0.85!36.40!DBP;;chr17:38256799..38256815,-!p3@NR1D1!0.85!11.34!NR1D1;;chr1:935496..935509,-!p3@HES4!0.85!9.55!HES4;;chr16:31885093..31885165,+!p1@ZNF267!0.84!96.28!ZNF267;;chr10:114710083..114710092,+!p8@TCF7L2!0.84!8.16!TCF7L2;;chr2:238600998..238601013,+!p5@LRRFIP1!0.84!5.97!LRRFIP1;;chrX:129244840..129244881,-!p2@ELF4!0.83!23.47!ELF4;;chr5:172483347..172483407,+!p1@C5orf41!0.82!45.15!CREBRF;;chr11:615942..615957,-!p1@IRF7!0.81!55.70!IRF7;;chr8:48650697..48650708,-!p2@CEBPD!0.81!45.15!CEBPD;;chr17:38498594..38498661,+!p2@RARA!0.81!19.69!RARA;;chr14:64971288..64971316,-!p2@ZBTB25!0.81!17.90!ZBTB25;;chr12:72056773..72056796,+!p3@THAP2!0.81!7.36!THAP2;;chr18:51750948..51751059,-!p1@MBD2!0.80!183.20!MBD2;;chr9:88969303..88969335,-!p1@ZCCHC6!0.80!53.71!ZCCHC6;;chr17:40440481..40440550,+!p1@STAT5A!0.80!41.77!STAT5A;;chr2:157198916..157198978,-!p2@NR4A2!0.80!20.09!NR4A2;;chr18:77155922..77155939,+!p1@NFATC1!0.80!15.32!NFATC1;;chr2:176033066..176033087,-!p2@ATF2!0.80!6.96!ATF2;;chr6:44355499..44355514,+!p3@CDC5L!0.80!5.97!CDC5L;;chrX:70712265..70712303,+!p4@TAF1!0.80!5.37!TAF1;;chr2:145275982..145276003,-!p7@ZEB2!0.80!5.37!ZEB2;;chr10:114886551..114886601,+!p11@TCF7L2!0.80!5.37!TCF7L2;;chr6:12011943..12012015,+!p2@HIVEP1!0.79!17.90!HIVEP1;;chr1:158979872..158979898,+!p3@IFI16!0.79!16.91!IFI16;;chr18:42260030..42260055,+!p3@SETBP1!0.79!6.56!SETBP1;;chr8:71316021..71316068,-!p1@NCOA2!0.78!51.12!NCOA2;;chr3:150126904..150126958,+!p7@TSC22D2!0.78!9.15!TSC22D2;;chr19:13213954..13214021,-!p4@LYL1!0.78!4.97!LYL1;;chr6:170862932..170862947,+!p5@TBP!0.78!4.97!TBP;;chr6:130339710..130339745,+!p1@L3MBTL3!0.77!42.37!L3MBTL3;;chr3:39195075..39195088,-!p1@CSRNP1!0.77!33.82!CSRNP1;;chr6:28092375..28092412,+!p1@ZSCAN16!0.77!22.48!ZSCAN16;;chr5:142782823..142782854,-!p3@NR3C1!0.77!7.16!NR3C1;;chr2:10183651..10183713,+!p1@KLF11!0.76!37.99!KLF11;;chr2:61108808..61108821,+!p3@REL!0.76!6.17!REL;;chr2:60780607..60780624,-!p2@BCL11A!0.75!15.32!BCL11A;;chr16:3313791..3313834,+!p2@ZNF263!0.75!10.94!ZNF263;;chr9:88969287..88969297,-!p3@ZCCHC6!0.75!6.37!ZCCHC6;;chr12:54694807..54694832,-!p3@NFE2!0.75!4.58!NFE2;;chr2:231090344..231090361,-!p3@SP110!0.75!4.58!SP110;;chr2:61108650..61108687,+!p2@REL!0.74!24.27!REL;;chr1:158979851..158979865,+!p5@IFI16!0.74!10.54!IFI16;;chr9:102584262..102584276,+!p1@NR4A3!0.73!10.54!NR4A3;;chr2:145282041..145282092,-!p8@ZEB2!0.73!6.96!ZEB2;;chr12:108154762..108154776,-!p4@PRDM4!0.73!4.38!PRDM4;;chr13:41593392..41593403,-!p7@ELF1!0.73!4.38!ELF1;;chr6:44233252..44233296,-!p1@NFKBIE!0.72!46.94!NFKBIE;;chr1:156470515..156470542,-!p2@MEF2D!0.72!24.86!MEF2D;;chr19:12405606..12405629,-!p2@ZNF44!0.72!8.95!ZNF44;;chr2:145274981..145274994,-!p9@ZEB2!0.72!6.56!ZEB2;;chr20:48807875..48807982,+!p2@CEBPB!0.71!103.24!CEBPB;;chr11:65686952..65686975,+!p5@DRAP1!0.71!25.66!DRAP1;;chr14:35872962..35873025,-!p3@NFKBIA!0.71!11.34!NFKBIA;;chr10:51572339..51572376,+!p4@NCOA4!0.71!10.14!NCOA4;;chr2:185463247..185463263,+!p1@ZNF804A!0.71!7.76!ZNF804A;;chr11:615570..615721,-!p2@IRF7!0.70!8.55!IRF7;;chr2:145277882..145277967,-!p3@ZEB2!0.70!7.36!ZEB2;;chr2:145277589..145277612,-!p12@ZEB2!0.70!3.98!ZEB2;;chr20:56195474..56195506,-!p1@ZBP1!0.70!3.98!ZBP1;;chr13:41593405..41593416,-!p9@ELF1!0.70!3.98!ELF1;;chr13:41240737..41240787,-!p1@FOXO1!0.69!52.71!FOXO1;;chr9:88969339..88969422,-!p2@ZCCHC6!0.69!34.41!ZCCHC6;;chrX:131623044..131623089,-!p1@MBNL3!0.69!18.10!MBNL3;;chr21:40177892..40177903,+!p2@ETS2!0.69!17.70!ETS2;;chr19:12075844..12075880,+!p3@ZNF763!0.69!7.16!ZNF763;;chr20:48807648..48807671,+!p9@CEBPB!0.69!5.97!CEBPB;;chr1:44679370..44679422,+!p3@DMAP1!0.69!5.37!DMAP1;;chr18:51750414..51750449,-!p5@MBD2!0.68!7.96!MBD2;;chr11:113930291..113930339,+!p2@ZBTB16!0.68!6.56!ZBTB16;;chr19:4067174..4067200,-!p9@ZBTB7A!0.68!4.77!ZBTB7A;;chr2:145274998..145275012,-!p13@ZEB2!0.68!4.38!ZEB2;;chr14:75746340..75746368,+!p3@FOS!0.68!3.78!FOS;;chrY:21906761..21906810,-!p2@KDM5D!0.68!3.78!KDM5D;;chr2:8822176..8822196,+!p1@ID2!0.67!605.10!ID2;;chr6: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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002396;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057
|fonse_cell_line=
|fonse_cell_line=
Line 38: Line 42:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor2.CNhs13207.11800-124C9.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor2.CNhs13207.11800-124C9.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor2.CNhs13207.11800-124C9.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor2.CNhs13207.11800-124C9.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor2.CNhs13207.11800-124C9.hg38.nobarcode.ctss.bed.gz
|id=FF:11800-124C9
|id=FF:11800-124C9
|is_a=EFO:0002091;;FF:0011100
|is_a=EFO:0002091;;FF:0011100
|is_obsolete=
|is_obsolete=
|library_id=CNhs13207
|library_id_phase_based=2:CNhs13207
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11800
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11800
|name=CD14-CD16+ Monocytes, donor2
|name=CD14-CD16+ Monocytes, donor2
|namespace=
|namespace=
Line 46: Line 61:
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|profile_cagescan=,,,
|profile_hcage=CNhs13207,LSID1004,release012,COMPLETED
|profile_hcage=CNhs13207,LSID1004,release012,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
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Line 61: Line 79:
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|sample_cell_line=
Line 82: Line 101:
|top_motifs=NANOG{mouse}:2.4080182646;HMX1:2.3542865049;SPI1:2.26626138303;SPIB:1.97600189765;IRF1,2:1.93679522441;DMAP1_NCOR{1,2}_SMARC:1.73287153969;NFIL3:1.55117890689;ETS1,2:1.53954869679;IRF7:1.52352414656;TLX2:1.40679989398;RFX2..5_RFXANK_RFXAP:1.33155110197;ATF5_CREB3:1.32997327706;ELF1,2,4:1.29398270047;TGIF1:1.27861015028;FOXN1:1.13995945248;FOX{F1,F2,J1}:1.12020664594;SREBF1,2:1.10470413735;RUNX1..3:1.04264380606;HES1:1.04201549292;CREB1:1.01012904005;FOXO1,3,4:0.973187276259;MAFB:0.968671667617;FOX{I1,J2}:0.938401146783;NR6A1:0.911331752681;PAX2:0.869409443356;ALX1:0.853582417576;PAX4:0.821857631339;ESRRA:0.783366358803;EP300:0.741624793907;ATF4:0.694742215466;CDX1,2,4:0.649085608309;GLI1..3:0.638451597201;NFKB1_REL_RELA:0.638284021546;FOXA2:0.637401605663;TAL1_TCF{3,4,12}:0.57406012081;ESR1:0.564443236547;NKX2-2,8:0.560535154778;ZBTB16:0.558271105593;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.535699093578;FOX{D1,D2}:0.518845540521;FOXP3:0.476113597899;NR5A1,2:0.445074347417;TOPORS:0.434134680482;EBF1:0.403750687552;POU5F1:0.397335005147;ALX4:0.366945026556;PAX8:0.35545236494;ELK1,4_GABP{A,B1}:0.311167150136;HIF1A:0.310977363286;HOXA9_MEIS1:0.306556840762;IKZF2:0.305431664915;HMGA1,2:0.293876853314;CRX:0.290744672455;HBP1_HMGB_SSRP1_UBTF:0.282986290033;RORA:0.249463009241;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.195854125321;PAX3,7:0.191998747945;EN1,2:0.191202268722;ZNF148:0.178427907709;BPTF:0.165338568194;JUN:0.158551847134;T:0.154732341124;RXRA_VDR{dimer}:0.153145881788;FOXQ1:0.15229069546;HLF:0.143335094443;FOXP1:0.143259720948;TFAP4:0.142240721017;TFCP2:0.140130516814;PITX1..3:0.133240439932;HNF4A_NR2F1,2:0.0920756694724;CEBPA,B_DDIT3:0.0903183974318;NR1H4:0.0578265023987;MEF2{A,B,C,D}:-0.00522725746997;FOSL2:-0.0113963505278;FOXD3:-0.0125018929891;OCT4_SOX2{dimer}:-0.0372648834182;GATA6:-0.0416095646985;ATF2:-0.0591106092907;PPARG:-0.0763186014623;RBPJ:-0.143022463587;POU2F1..3:-0.179571683245;NFE2L2:-0.18183907171;MYB:-0.191009033974;BACH2:-0.196629112705;NFE2L1:-0.214449364016;GZF1:-0.217214668017;FOS_FOS{B,L1}_JUN{B,D}:-0.217767777816;PDX1:-0.239395276417;ATF6:-0.254203725182;RFX1:-0.259913599275;YY1:-0.275849847899;GATA4:-0.290100479347;STAT1,3:-0.305928925447;POU1F1:-0.318048315291;HOX{A5,B5}:-0.323028582031;VSX1,2:-0.341005226111;PBX1:-0.352260891192;NANOG:-0.358523037657;NKX2-3_NKX2-5:-0.362978765571;CUX2:-0.363310209386;NHLH1,2:-0.364293398887;AR:-0.36477503288;NFE2:-0.367513034527;MYFfamily:-0.397562334462;AHR_ARNT_ARNT2:-0.40468324211;STAT2,4,6:-0.409988154809;NFIX:-0.418028039174;SOX2:-0.445699609738;NKX3-1:-0.454940304317;PRRX1,2:-0.468077895772;REST:-0.471499155467;TFAP2{A,C}:-0.490550351736;SPZ1:-0.494695858299;MYOD1:-0.517218810043;MTF1:-0.547713269168;PAX1,9:-0.555625632531;SRF:-0.567465200859;DBP:-0.567716909286;BREu{core}:-0.576271285804;HNF1A:-0.609072600507;AIRE:-0.618904630728;SOX{8,9,10}:-0.65582814152;STAT5{A,B}:-0.681449541407;HOX{A6,A7,B6,B7}:-0.683275907189;ONECUT1,2:-0.68899804016;KLF4:-0.727796524608;ZEB1:-0.734050360044;RXR{A,B,G}:-0.734867818134;ZNF238:-0.756635980524;PAX5:-0.761636020048;NKX3-2:-0.780260449776;PRDM1:-0.793774293478;LHX3,4:-0.813146661775;HSF1,2:-0.814179259776;FOXL1:-0.818688290196;SOX5:-0.820324441636;NFY{A,B,C}:-0.829357645363;HOX{A4,D4}:-0.860586036566;E2F1..5:-0.870484723146;PATZ1:-0.873340128294;XBP1:-0.876875132121;NKX6-1,2:-0.922394227114;LEF1_TCF7_TCF7L1,2:-0.924563158241;EGR1..3:-0.926319875929;RREB1:-0.952417706238;SNAI1..3:-0.965999944783;ZFP161:-0.967140737129;ADNP_IRX_SIX_ZHX:-0.97805241983;TFAP2B:-0.980276408104;SMAD1..7,9:-0.983809514395;ZBTB6:-1.01494661563;ZNF423:-1.02398111364;IKZF1:-1.06181908896;MZF1:-1.06897929175;HAND1,2:-1.0735715335;UFEwm:-1.07521166689;EVI1:-1.08394901913;ARID5B:-1.10477950074;ZIC1..3:-1.11214987311;SP1:-1.11518970263;NRF1:-1.14296479339;MTE{core}:-1.16190863817;MED-1{core}:-1.16304172185;GCM1,2:-1.22188867313;TLX1..3_NFIC{dimer}:-1.24645368154;LMO2:-1.25996981584;HIC1:-1.27900095904;POU6F1:-1.31729781183;ZNF143:-1.32689261611;TBP:-1.32959246608;GTF2I:-1.33272576039;MYBL2:-1.34134593472;PAX6:-1.35656508406;TP53:-1.36565509179;GFI1B:-1.41242864078;MAZ:-1.41976249103;NKX2-1,4:-1.43277797137;GFI1:-1.44124385286;ZNF384:-1.44570493904;FOXM1:-1.47714037245;TFDP1:-1.50444091185;XCPE1{core}:-1.50934297061;CDC5L:-1.51179565405;TEAD1:-1.55158829289;bHLH_family:-1.58966232445;GTF2A1,2:-1.65240096494;NR3C1:-1.65346781035;TEF:-1.65367997402;NFATC1..3:-1.6587264916;SOX17:-1.86406772471;TBX4,5:-1.95929015295;POU3F1..4:-2.44945000511
|top_motifs=NANOG{mouse}:2.4080182646;HMX1:2.3542865049;SPI1:2.26626138303;SPIB:1.97600189765;IRF1,2:1.93679522441;DMAP1_NCOR{1,2}_SMARC:1.73287153969;NFIL3:1.55117890689;ETS1,2:1.53954869679;IRF7:1.52352414656;TLX2:1.40679989398;RFX2..5_RFXANK_RFXAP:1.33155110197;ATF5_CREB3:1.32997327706;ELF1,2,4:1.29398270047;TGIF1:1.27861015028;FOXN1:1.13995945248;FOX{F1,F2,J1}:1.12020664594;SREBF1,2:1.10470413735;RUNX1..3:1.04264380606;HES1:1.04201549292;CREB1:1.01012904005;FOXO1,3,4:0.973187276259;MAFB:0.968671667617;FOX{I1,J2}:0.938401146783;NR6A1:0.911331752681;PAX2:0.869409443356;ALX1:0.853582417576;PAX4:0.821857631339;ESRRA:0.783366358803;EP300:0.741624793907;ATF4:0.694742215466;CDX1,2,4:0.649085608309;GLI1..3:0.638451597201;NFKB1_REL_RELA:0.638284021546;FOXA2:0.637401605663;TAL1_TCF{3,4,12}:0.57406012081;ESR1:0.564443236547;NKX2-2,8:0.560535154778;ZBTB16:0.558271105593;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.535699093578;FOX{D1,D2}:0.518845540521;FOXP3:0.476113597899;NR5A1,2:0.445074347417;TOPORS:0.434134680482;EBF1:0.403750687552;POU5F1:0.397335005147;ALX4:0.366945026556;PAX8:0.35545236494;ELK1,4_GABP{A,B1}:0.311167150136;HIF1A:0.310977363286;HOXA9_MEIS1:0.306556840762;IKZF2:0.305431664915;HMGA1,2:0.293876853314;CRX:0.290744672455;HBP1_HMGB_SSRP1_UBTF:0.282986290033;RORA:0.249463009241;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.195854125321;PAX3,7:0.191998747945;EN1,2:0.191202268722;ZNF148:0.178427907709;BPTF:0.165338568194;JUN:0.158551847134;T:0.154732341124;RXRA_VDR{dimer}:0.153145881788;FOXQ1:0.15229069546;HLF:0.143335094443;FOXP1:0.143259720948;TFAP4:0.142240721017;TFCP2:0.140130516814;PITX1..3:0.133240439932;HNF4A_NR2F1,2:0.0920756694724;CEBPA,B_DDIT3:0.0903183974318;NR1H4:0.0578265023987;MEF2{A,B,C,D}:-0.00522725746997;FOSL2:-0.0113963505278;FOXD3:-0.0125018929891;OCT4_SOX2{dimer}:-0.0372648834182;GATA6:-0.0416095646985;ATF2:-0.0591106092907;PPARG:-0.0763186014623;RBPJ:-0.143022463587;POU2F1..3:-0.179571683245;NFE2L2:-0.18183907171;MYB:-0.191009033974;BACH2:-0.196629112705;NFE2L1:-0.214449364016;GZF1:-0.217214668017;FOS_FOS{B,L1}_JUN{B,D}:-0.217767777816;PDX1:-0.239395276417;ATF6:-0.254203725182;RFX1:-0.259913599275;YY1:-0.275849847899;GATA4:-0.290100479347;STAT1,3:-0.305928925447;POU1F1:-0.318048315291;HOX{A5,B5}:-0.323028582031;VSX1,2:-0.341005226111;PBX1:-0.352260891192;NANOG:-0.358523037657;NKX2-3_NKX2-5:-0.362978765571;CUX2:-0.363310209386;NHLH1,2:-0.364293398887;AR:-0.36477503288;NFE2:-0.367513034527;MYFfamily:-0.397562334462;AHR_ARNT_ARNT2:-0.40468324211;STAT2,4,6:-0.409988154809;NFIX:-0.418028039174;SOX2:-0.445699609738;NKX3-1:-0.454940304317;PRRX1,2:-0.468077895772;REST:-0.471499155467;TFAP2{A,C}:-0.490550351736;SPZ1:-0.494695858299;MYOD1:-0.517218810043;MTF1:-0.547713269168;PAX1,9:-0.555625632531;SRF:-0.567465200859;DBP:-0.567716909286;BREu{core}:-0.576271285804;HNF1A:-0.609072600507;AIRE:-0.618904630728;SOX{8,9,10}:-0.65582814152;STAT5{A,B}:-0.681449541407;HOX{A6,A7,B6,B7}:-0.683275907189;ONECUT1,2:-0.68899804016;KLF4:-0.727796524608;ZEB1:-0.734050360044;RXR{A,B,G}:-0.734867818134;ZNF238:-0.756635980524;PAX5:-0.761636020048;NKX3-2:-0.780260449776;PRDM1:-0.793774293478;LHX3,4:-0.813146661775;HSF1,2:-0.814179259776;FOXL1:-0.818688290196;SOX5:-0.820324441636;NFY{A,B,C}:-0.829357645363;HOX{A4,D4}:-0.860586036566;E2F1..5:-0.870484723146;PATZ1:-0.873340128294;XBP1:-0.876875132121;NKX6-1,2:-0.922394227114;LEF1_TCF7_TCF7L1,2:-0.924563158241;EGR1..3:-0.926319875929;RREB1:-0.952417706238;SNAI1..3:-0.965999944783;ZFP161:-0.967140737129;ADNP_IRX_SIX_ZHX:-0.97805241983;TFAP2B:-0.980276408104;SMAD1..7,9:-0.983809514395;ZBTB6:-1.01494661563;ZNF423:-1.02398111364;IKZF1:-1.06181908896;MZF1:-1.06897929175;HAND1,2:-1.0735715335;UFEwm:-1.07521166689;EVI1:-1.08394901913;ARID5B:-1.10477950074;ZIC1..3:-1.11214987311;SP1:-1.11518970263;NRF1:-1.14296479339;MTE{core}:-1.16190863817;MED-1{core}:-1.16304172185;GCM1,2:-1.22188867313;TLX1..3_NFIC{dimer}:-1.24645368154;LMO2:-1.25996981584;HIC1:-1.27900095904;POU6F1:-1.31729781183;ZNF143:-1.32689261611;TBP:-1.32959246608;GTF2I:-1.33272576039;MYBL2:-1.34134593472;PAX6:-1.35656508406;TP53:-1.36565509179;GFI1B:-1.41242864078;MAZ:-1.41976249103;NKX2-1,4:-1.43277797137;GFI1:-1.44124385286;ZNF384:-1.44570493904;FOXM1:-1.47714037245;TFDP1:-1.50444091185;XCPE1{core}:-1.50934297061;CDC5L:-1.51179565405;TEAD1:-1.55158829289;bHLH_family:-1.58966232445;GTF2A1,2:-1.65240096494;NR3C1:-1.65346781035;TEF:-1.65367997402;NFATC1..3:-1.6587264916;SOX17:-1.86406772471;TBX4,5:-1.95929015295;POU3F1..4:-2.44945000511
|xref=
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11800-124C9;search_select_hide=table117:FF:11800-124C9
}}
}}

Latest revision as of 18:21, 4 June 2020

Name:CD14-CD16+ Monocytes, donor2
Species:Human (Homo sapiens)
Library ID:CNhs13207
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
age23
cell typemonocyte
cell lineNA
companyNA
collaborationMichael Rehli (University of Regensberg)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number29
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005837
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13207 CAGE DRX008168 DRR009040
Accession ID Hg19

Library idBAMCTSS
CNhs13207 DRZ000465 DRZ001850
Accession ID Hg38

Library idBAMCTSS
CNhs13207 DRZ011815 DRZ013200
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.114
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.0788
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.296
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0847
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.112
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.119
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.476
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.145
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.145
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.387
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.246
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.21
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.578
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.145
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.0839
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.12
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.0788
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.034
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.405
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.855
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.579
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.53
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.581
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.446
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.145
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.679
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.0788
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.145
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.362
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.62
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.303
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.504
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral1.162
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.0788
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.3
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood1.194
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0.174
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.53
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.145
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.0788
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole1.051
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13207

Jaspar motifP-value
MA0002.24.88395e-7
MA0003.10.0551
MA0004.10.559
MA0006.10.88
MA0007.10.974
MA0009.10.137
MA0014.10.654
MA0017.10.00875
MA0018.20.1
MA0019.10.611
MA0024.10.0133
MA0025.10.158
MA0027.10.74
MA0028.10.269
MA0029.10.255
MA0030.10.284
MA0031.10.525
MA0035.20.885
MA0038.10.028
MA0039.20.554
MA0040.10.43
MA0041.10.452
MA0042.10.278
MA0043.10.0674
MA0046.10.0444
MA0047.20.132
MA0048.10.803
MA0050.14.06443e-13
MA0051.12.25679e-6
MA0052.10.741
MA0055.10.815
MA0057.10.929
MA0058.10.347
MA0059.10.549
MA0060.11.87242e-5
MA0061.10.00388
MA0062.22.34337e-5
MA0065.20.0103
MA0066.10.149
MA0067.10.00718
MA0068.10.456
MA0069.10.913
MA0070.10.00806
MA0071.10.044
MA0072.10.596
MA0073.10.407
MA0074.10.316
MA0076.10.222
MA0077.10.064
MA0078.10.836
MA0079.20.655
MA0080.27.75163e-17
MA0081.14.53589e-5
MA0083.10.409
MA0084.10.395
MA0087.10.308
MA0088.10.464
MA0090.10.0049
MA0091.10.325
MA0092.10.413
MA0093.10.632
MA0099.20.621
MA0100.10.936
MA0101.10.036
MA0102.25.46128e-4
MA0103.10.531
MA0104.20.569
MA0105.12.21655e-5
MA0106.10.591
MA0107.10.0143
MA0108.25.55231e-10
MA0111.10.256
MA0112.26.5678e-4
MA0113.10.775
MA0114.10.063
MA0115.10.305
MA0116.13.67642e-5
MA0117.10.498
MA0119.10.328
MA0122.10.691
MA0124.10.243
MA0125.10.235
MA0131.10.637
MA0135.10.935
MA0136.13.20329e-20
MA0137.20.49
MA0138.20.724
MA0139.10.594
MA0140.10.905
MA0141.10.0158
MA0142.10.384
MA0143.10.81
MA0144.10.899
MA0145.10.23
MA0146.10.0249
MA0147.10.625
MA0148.10.563
MA0149.10.116
MA0150.10.1
MA0152.10.0322
MA0153.10.00547
MA0154.10.00214
MA0155.10.876
MA0156.14.32693e-11
MA0157.10.279
MA0159.10.0741
MA0160.10.00986
MA0162.10.639
MA0163.11.08892e-12
MA0164.10.907
MA0258.10.0103
MA0259.10.981



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13207

Novel motifP-value
10.101
100.0232
1000.919
1010.34
1020.414
1030.266
1040.648
1050.285
1060.00816
1070.629
1080.905
1090.025
110.147
1100.192
1110.0176
1120.164
1130.513
1140.00287
1150.436
1160.981
1170.019
1180.0982
1190.172
120.354
1200.53
1210.95
1220.863
1234.08119e-4
1240.474
1250.0486
1260.156
1270.294
1280.0639
1290.967
130.0979
1300.268
1310.973
1320.0541
1330.0537
1340.671
1350.191
1360.631
1373.73245e-4
1380.259
1390.0139
140.318
1400.271
1410.723
1420.921
1430.0992
1440.914
1450.33
1460.791
1470.347
1480.0298
1490.619
150.108
1500.48
1510.24
1520.222
1530.459
1540.793
1550.0397
1560.883
1570.95
1580.144
1590.376
160.394
1600.515
1610.416
1620.699
1630.246
1640.123
1650.0379
1660.295
1670.0742
1680.649
1690.0166
170.345
180.196
190.281
20.803
200.49
210.412
220.253
230.336
240.332
250.125
260.0621
270.459
280.535
290.0652
30.0601
300.368
310.602
320.823
330.235
340.576
350.159
360.0513
370.0488
380.515
390.645
40.904
400.194
410.0743
420.279
430.0723
440.448
450.866
460.105
470.314
480.338
490.0877
50.133
500.995
510.394
520.347
530.318
540.417
550.407
560.769
570.752
580.027
590.119
60.994
600.0344
610.172
620.00662
630.48
640.342
650.374
660.268
670.217
680.983
690.509
70.147
700.0165
710.0436
720.299
730.129
740.494
750.0336
760.293
770.585
780.226
790.254
80.241
800.373
810.176
820.122
830.936
840.786
850.0501
860.0973
870.176
880.47
890.821
90.307
900.0815
910.43
920.385
930.399
940.015
950.0516
960.311
970.929
980.146
990.0808



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13207


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000875 (non-classical monocyte)
0002396 (CD14-low, CD16-positive monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0011100 (human CD14-CD16-positive Monocytes sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)

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