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(Created page with "{{f5samples |id=FF:11800-124C9 |name=CD14-CD16+ Monocytes, donor2 |sample_id=11800 |rna_tube_id=124C9 |rna_box=124 |rna_position=C9 |sample_cell_lot= |sample_cell_cata...")
 
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{{f5samples
{{f5samples
|id=FF:11800-124C9
|DRA_sample_Accession=CAGE@SAMD00005837
|name=CD14-CD16+ Monocytes, donor2
|accession_numbers=CAGE;DRX008168;DRR009040;DRZ000465;DRZ001850;DRZ011815;DRZ013200
|sample_id=11800
|ancestors_in_anatomy_facet=
|rna_tube_id=124C9
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000875,CL:0002396
|rna_box=124
|rna_position=C9
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=29.00000
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=23
|sample_ethnicity=
|rna_rin=
|rna_od260/230=1.26000
|rna_od260/280=1.94000
|sample_cell_type=monocyte
|sample_cell_line=
|sample_collaboration=Michael Rehli (University of Regensberg)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=1.12960
|rna_concentration=0.11296
|sample_note=
|profile_hcage=CNhs13207,LSID1004,release012,MAPPING
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000860,CL:0000875,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002057,CL:0002087,CL:0002194,CL:0002320,CL:0002371,CL:0002393,CL:0002396,CL:0002397
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0011100
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr11:47400078..47400106,-!p1@SPI1!2.67!466.46!SPI1;;chr2:68592406..68592424,+!p1@PLEK!2.61!407.98!PLEK;;chr7:50344289..50344323,+!p1@IKZF1!2.07!117.56!IKZF1;;chr11:47399947..47399961,-!p3@SPI1!2.06!112.59!SPI1;;chr11:47400062..47400077,-!p2@SPI1!1.96!89.31!SPI1;;chr16:85932760..85932775,+!p1@IRF8!1.83!66.84!IRF8;;chr12:54778351..54778378,-!p6@ZNF385A!1.81!64.25!ZNF385A;;chr19:13213662..13213686,-!p1@LYL1!1.77!84.74!LYL1;;chr21:34442439..34442455,+!p1@OLIG1!1.75!54.90!OLIG1;;chr5:176735063..176735088,-!p2@MXD3!1.71!49.93!MXD3;;chr2:145277640..145277771,-!p1@ZEB2!1.67!586.21!ZEB2;;chr11:47399996..47400014,-!p4@SPI1!1.67!45.95!SPI1;;chr20:39317868..39317884,-!p1@MAFB!1.66!503.26!MAFB;;chr11:47399920..47399931,-!p7@SPI1!1.63!41.57!SPI1;;chr21:34442540..34442560,+!p2@OLIG1!1.63!41.37!OLIG1;;chr19:33793430..33793447,-!p1@CEBPA!1.62!163.11!CEBPA;;chr11:47400032..47400043,-!p5@SPI1!1.62!40.58!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!1.57!35.81!ZNF385A;;chrX:106960180..106960197,-!p2@TSC22D3!1.55!127.90!TSC22D3;;chr19:16435625..16435682,+!p1@KLF2!1.49!913.82!KLF2;;chr11:47400045..47400060,-!p6@SPI1!1.49!29.64!SPI1;;chr1:25256756..25256774,-!p1@RUNX3!1.44!49.13!RUNX3;;chr19:42636586..42636607,-!p1@POU2F2!1.42!67.63!POU2F2;;chr7:128577972..128578047,+!p1@IRF5!1.42!38.99!IRF5;;chr5:88178983..88179012,-!p1@MEF2C!1.41!184.99!MEF2C;;chr1:212873084..212873137,-!p2@BATF3!1.41!24.47!BATF3;;chr9:110252035..110252057,-!p1@KLF4!1.33!315.28!KLF4;;chr14:75745523..75745537,+!p1@FOS!1.32!2285.75!FOS;;chr3:101568349..101568365,+!p1@NFKBIZ!1.32!995.18!NFKBIZ;;chr10:114710098..114710130,+!p2@TCF7L2!1.32!145.21!TCF7L2;;chr10:94449703..94449718,+!p1@HHEX!1.31!74.39!HHEX;;chr2:68592394..68592405,+!p2@PLEK!1.31!19.29!PLEK;;chr9:110250697..110250738,-!p2@KLF4!1.30!22.28!KLF4;;chr10:51572408..51572454,+!p3@NCOA4!1.29!106.82!NCOA4;;chrX:106960221..106960236,-!p3@TSC22D3!1.29!50.52!TSC22D3;;chr7:50343634..50343717,+!p2@IKZF1!1.29!18.70!IKZF1;;chrX:106960249..106960260,-!p5@TSC22D3!1.27!27.85!TSC22D3;;chrY:21906594..21906622,-!p1@KDM5D!1.27!17.70!KDM5D;;chr2:231090433..231090469,+!p1@SP140!1.27!17.50!SP140;;chr10:114709999..114710031,+!p1@TCF7L2!1.24!378.54!TCF7L2;;chr11:128563948..128564003,+!p1@FLI1!1.24!192.95!FLI1;;chrX:106960285..106960299,-!p1@TSC22D3!1.22!405.39!TSC22D3;;chr1:935467..935484,-!p1@HES4!1.20!64.65!HES4;;chr1:25256439..25256476,-!p3@RUNX3!1.20!14.72!RUNX3;;chr2:28618532..28618610,+!p4@FOSL2!1.19!24.67!FOSL2;;chr12:72056800..72056834,+!p1@THAP2!1.18!19.10!THAP2;;chr2:145271342..145271377,-!p5@ZEB2!1.18!14.12!ZEB2;;chr10:3827371..3827386,-!p2@KLF6!1.17!115.37!KLF6;;chr20:48807456..48807475,+!p3@CEBPB!1.17!26.65!CEBPB;;chr2:208394817..208394834,+!p3@CREB1!1.16!53.51!CREB1;;chr19:12902289..12902307,+!p1@JUNB!1.14!2910.55!JUNB;;chr12:52445218..52445237,+!p1@NR4A1!1.13!155.95!NR4A1;;chr13:41593425..41593480,-!p1@ELF1!1.13!79.17!ELF1;;chr12:54694758..54694805,-!p1@NFE2!1.12!14.92!NFE2;;chr10:114710244..114710257,+!p3@TCF7L2!1.11!32.42!TCF7L2;;chr2:208031943..208031978,-!p5@KLF7!1.11!15.91!KLF7;;chr1:212873061..212873080,-!p4@BATF3!1.11!11.94!BATF3;;chr2:238600933..238600985,+!p3@LRRFIP1!1.09!61.86!LRRFIP1;;chr4:185395633..185395651,-!p2@IRF2!1.09!18.30!IRF2;;chr2:70142232..70142251,+!p1@MXD1!1.08!63.06!MXD1;;chr19:45579725..45579743,-!p1@ZNF296!1.08!49.73!ZNF296;;chr8:71316428..71316459,-!p2@NCOA2!1.05!17.11!NCOA2;;chr14:75746722..75746777,+!p2@FOS!1.05!13.13!FOS;;chr9:135854091..135854159,+!p1@GFI1B!1.05!10.34!GFI1B;;chr15:90544182..90544195,+!p7@ZNF710!1.05!10.14!ZNF710;;chr2:61108695..61108753,+!p1@REL!1.04!69.22!REL;;chr10:94449675..94449694,+!p2@HHEX!1.04!26.85!HHEX;;chr6:391743..391759,+!p1@IRF4!1.03!9.75!IRF4;;chr19:45971246..45971265,+!p1@FOSB!1.02!181.01!FOSB;;chr9:137217986..137218049,+!p3@RXRA!1.02!27.65!RXRA;;chr4:38665810..38665827,+!p1@KLF3!1.01!138.25!KLF3;;chr7:77428066..77428132,+!p2@PHTF2!1.01!60.47!PHTF2;;chr10:114710060..114710069,+!p5@TCF7L2!1.01!15.91!TCF7L2;;chrY:2803415..2803468,+!p1@ZFY!1.01!9.35!ZFY;;chr21:30671690..30671762,+!p2@BACH1!1.00!31.23!BACH1;;chr7:50344251..50344288,+!p3@IKZF1!1.00!8.95!IKZF1;;chr1:935398..935465,-!p2@HES4!0.99!18.50!HES4;;chr6:144385698..144385742,-!p2@PLAGL1!0.99!10.74!PLAGL1;;chr17:38497662..38497713,+!p4@RARA!0.99!10.14!RARA;;chr5:131826457..131826514,-!p1@IRF1!0.98!345.32!IRF1;;chr4:185395191..185395226,-!p4@IRF2!0.98!12.13!IRF2;;chr7:115670804..115670825,-!p1@TFEC!0.98!8.55!TFEC;;chr8:37553292..37553317,+!p1@ZNF703!0.97!203.09!ZNF703;;chr4:185395590..185395627,-!p3@IRF2!0.97!10.54!IRF2;;chr2:231084659..231084721,-!p1@SP110!0.96!196.93!SP110;;chr21:30672433..30672464,+!p6@BACH1!0.96!8.16!BACH1;;chr10:135044190..135044229,+!p3@UTF1!0.96!8.16!UTF1;;chr4:106068026..106068084,+!p1@TET2!0.94!72.41!TET2;;chr14:45722360..45722415,-!p1@MIS18BP1!0.93!121.34!MIS18BP1;;chr10:35416142..35416169,+!p3@CREM!0.93!20.49!CREM;;chr10:114710218..114710229,+!p4@TCF7L2!0.93!15.12!TCF7L2;;chr1:158978768..158978800,+!p8@IFI16!0.93!7.56!IFI16;;chr9:110252074..11025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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002396;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057
|fonse_cell_line=
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|fonse_cell_line_closure=
Line 67: Line 41:
|fonse_treatment=
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|fonse_treatment_closure=
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|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor2.CNhs13207.11800-124C9.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor2.CNhs13207.11800-124C9.hg38.nobarcode.ctss.bed.gz
|id=FF:11800-124C9
|is_a=EFO:0002091;;FF:0011100
|is_obsolete=
|library_id=CNhs13207
|library_id_phase_based=2:CNhs13207
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11800
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11800
|name=CD14-CD16+ Monocytes, donor2
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|profile_hcage=CNhs13207,LSID1004,release012,COMPLETED
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|rna_box=124
|rna_catalog_number=
|rna_concentration=0.11296
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=29
|rna_od260/230=1.26
|rna_od260/280=1.94
|rna_position=C9
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=124C9
|rna_weight_ug=1.1296
|sample_age=23
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=monocyte
|sample_collaboration=Michael Rehli (University of Regensberg)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.19523474238604e-214!GO:0043227;membrane-bound organelle;9.69706743274033e-166!GO:0043231;intracellular membrane-bound organelle;1.8746851413335e-165!GO:0043226;organelle;4.1749580591545e-154!GO:0043229;intracellular organelle;2.12501477405372e-153!GO:0005737;cytoplasm;7.90506179987115e-144!GO:0044444;cytoplasmic part;4.65269975354579e-101!GO:0044422;organelle part;8.24999385684196e-98!GO:0044446;intracellular organelle part;3.96422150983678e-96!GO:0044237;cellular metabolic process;3.65237459789254e-86!GO:0032991;macromolecular complex;1.63612705645531e-84!GO:0044238;primary metabolic process;2.85659637657777e-82!GO:0043170;macromolecule metabolic process;7.52075026747028e-81!GO:0030529;ribonucleoprotein complex;4.54920001062909e-76!GO:0005634;nucleus;1.58188582252314e-70!GO:0003723;RNA binding;2.39407369852459e-68!GO:0044428;nuclear part;1.35662661209188e-61!GO:0005739;mitochondrion;2.45380453116436e-58!GO:0043233;organelle lumen;2.13147449387558e-55!GO:0031974;membrane-enclosed lumen;2.13147449387558e-55!GO:0006412;translation;5.66684001562791e-53!GO:0005515;protein binding;2.59177367020347e-49!GO:0019538;protein metabolic process;8.677808271252e-48!GO:0010467;gene expression;1.00304850095276e-46!GO:0043283;biopolymer metabolic process;1.86169838493673e-46!GO:0044267;cellular protein metabolic process;1.81095516343878e-45!GO:0044260;cellular macromolecule metabolic process;1.85130522648031e-45!GO:0033036;macromolecule localization;4.41500869293974e-45!GO:0015031;protein transport;3.78977084401676e-44!GO:0006396;RNA processing;9.97377721396572e-44!GO:0005840;ribosome;1.50264103373652e-43!GO:0045184;establishment of protein localization;1.53584384952751e-43!GO:0008104;protein localization;5.23023825439738e-42!GO:0043234;protein complex;8.13226443958366e-42!GO:0009059;macromolecule biosynthetic process;3.71897236685097e-40!GO:0044429;mitochondrial part;1.61705937385384e-39!GO:0003735;structural constituent of ribosome;7.37604443780758e-39!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.1593744485731e-38!GO:0016071;mRNA metabolic process;3.17052253203066e-38!GO:0031090;organelle membrane;2.10670312101678e-37!GO:0005829;cytosol;1.26403304105438e-36!GO:0031981;nuclear lumen;2.25407388466451e-36!GO:0031967;organelle envelope;6.0296495438249e-36!GO:0008380;RNA splicing;7.64602224737802e-36!GO:0033279;ribosomal subunit;8.41174547947848e-36!GO:0031975;envelope;1.25496762466874e-35!GO:0044249;cellular biosynthetic process;1.72177359149143e-35!GO:0009058;biosynthetic process;1.39695782197858e-34!GO:0006397;mRNA processing;7.804080974913e-34!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.01520122810864e-29!GO:0016043;cellular component organization and biogenesis;1.21219648916905e-27!GO:0046907;intracellular transport;1.52367543234319e-27!GO:0006886;intracellular protein transport;1.52801436682961e-27!GO:0003676;nucleic acid binding;5.71472469794091e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.25068383553699e-26!GO:0005681;spliceosome;1.34553101588319e-26!GO:0005740;mitochondrial envelope;3.70116014846434e-26!GO:0065003;macromolecular complex assembly;1.30862947657733e-25!GO:0031966;mitochondrial membrane;3.86482003406627e-25!GO:0005654;nucleoplasm;1.19776241866696e-24!GO:0044445;cytosolic part;3.87719865871621e-24!GO:0019866;organelle inner membrane;4.4542290989711e-24!GO:0006119;oxidative phosphorylation;1.58560615343653e-22!GO:0000166;nucleotide binding;5.06961983781093e-22!GO:0005743;mitochondrial inner membrane;5.22105241441258e-22!GO:0022607;cellular component assembly;1.73926494043602e-21!GO:0051649;establishment of cellular localization;9.1346682521608e-21!GO:0016070;RNA metabolic process;1.14827461005942e-20!GO:0006259;DNA metabolic process;3.60400313418182e-20!GO:0051641;cellular localization;3.7334278837843e-20!GO:0044455;mitochondrial membrane part;4.60688273563211e-20!GO:0044451;nucleoplasm part;7.17426165011797e-20!GO:0006996;organelle organization and biogenesis;2.72138446877742e-19!GO:0022618;protein-RNA complex assembly;3.99697277131047e-19!GO:0006915;apoptosis;6.37885775146384e-19!GO:0012501;programmed cell death;7.78197324541002e-19!GO:0015935;small ribosomal subunit;1.13215435546247e-18!GO:0006512;ubiquitin cycle;2.17617282194938e-18!GO:0015934;large ribosomal subunit;4.24461324398003e-18!GO:0044265;cellular macromolecule catabolic process;9.6249761872961e-18!GO:0008219;cell death;2.20295725285397e-17!GO:0016265;death;2.20295725285397e-17!GO:0016874;ligase activity;7.41005266663061e-17!GO:0008134;transcription factor binding;1.03496552143053e-16!GO:0043412;biopolymer modification;2.17856074917634e-16!GO:0031980;mitochondrial lumen;2.85918326957738e-16!GO:0005759;mitochondrial matrix;2.85918326957738e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.13788910353542e-16!GO:0017111;nucleoside-triphosphatase activity;4.55287123813826e-16!GO:0016462;pyrophosphatase activity;5.0366868625407e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;5.1021690933034e-16!GO:0032553;ribonucleotide binding;5.7108386202205e-16!GO:0032555;purine ribonucleotide binding;5.7108386202205e-16!GO:0005746;mitochondrial respiratory chain;6.01743463708629e-16!GO:0017076;purine nucleotide binding;9.43856060726913e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.71901005808764e-15!GO:0044248;cellular catabolic process;3.09953748595438e-15!GO:0008135;translation factor activity, nucleic acid binding;3.99807917255892e-15!GO:0000502;proteasome complex (sensu Eukaryota);4.92820949446211e-15!GO:0016604;nuclear body;5.05821511160167e-15!GO:0019941;modification-dependent protein catabolic process;6.1855700259261e-15!GO:0043632;modification-dependent macromolecule catabolic process;6.1855700259261e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;6.39527978858628e-15!GO:0044257;cellular protein catabolic process;1.23153443317814e-14!GO:0006511;ubiquitin-dependent protein catabolic process;1.2511689821371e-14!GO:0006464;protein modification process;1.7694837483223e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.07932938573632e-14!GO:0003954;NADH dehydrogenase activity;2.07932938573632e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.07932938573632e-14!GO:0006605;protein targeting;2.48604585906569e-14!GO:0016192;vesicle-mediated transport;3.05047764500439e-14!GO:0043285;biopolymer catabolic process;4.06650848635329e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.64779938659528e-14!GO:0051186;cofactor metabolic process;6.07909187591208e-14!GO:0009057;macromolecule catabolic process;7.36686240725534e-14!GO:0006457;protein folding;1.44367879759375e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.45061387430676e-13!GO:0043228;non-membrane-bound organelle;2.36093736978876e-13!GO:0043232;intracellular non-membrane-bound organelle;2.36093736978876e-13!GO:0043687;post-translational protein modification;2.56234527092091e-13!GO:0042775;organelle ATP synthesis coupled electron transport;4.47708265502835e-13!GO:0042773;ATP synthesis coupled electron transport;4.47708265502835e-13!GO:0005524;ATP binding;1.10719757424579e-12!GO:0005730;nucleolus;1.13132535781449e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.13132535781449e-12!GO:0045271;respiratory chain complex I;1.13132535781449e-12!GO:0005747;mitochondrial respiratory chain complex I;1.13132535781449e-12!GO:0016607;nuclear speck;1.26608854800262e-12!GO:0006974;response to DNA damage stimulus;1.36002634811227e-12!GO:0006413;translational initiation;1.51007774537593e-12!GO:0032559;adenyl ribonucleotide binding;1.91342501198245e-12!GO:0048770;pigment granule;2.56129855898581e-12!GO:0042470;melanosome;2.56129855898581e-12!GO:0003743;translation initiation factor activity;3.12762038462394e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.36904820242753e-12!GO:0030554;adenyl nucleotide binding;4.00150672222396e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;4.399061699046e-12!GO:0000375;RNA splicing, via transesterification reactions;4.399061699046e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.399061699046e-12!GO:0006913;nucleocytoplasmic transport;6.09251096335925e-12!GO:0012505;endomembrane system;8.75193111634563e-12!GO:0051169;nuclear transport;1.13728997071815e-11!GO:0005773;vacuole;1.51286007642624e-11!GO:0006732;coenzyme metabolic process;2.13633285859701e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.73286291351912e-11!GO:0042981;regulation of apoptosis;3.03504732566225e-11!GO:0006446;regulation of translational initiation;4.6826776927085e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;4.69681521573495e-11!GO:0043067;regulation of programmed cell death;5.33151248534434e-11!GO:0005761;mitochondrial ribosome;5.66936468744766e-11!GO:0000313;organellar ribosome;5.66936468744766e-11!GO:0016787;hydrolase activity;6.55948939698816e-11!GO:0000323;lytic vacuole;9.01510548822295e-11!GO:0005764;lysosome;9.01510548822295e-11!GO:0030163;protein catabolic process;1.20079580968767e-10!GO:0008639;small protein conjugating enzyme activity;1.40533120867713e-10!GO:0006323;DNA packaging;1.55748009936661e-10!GO:0003712;transcription cofactor activity;1.83522073968632e-10!GO:0016887;ATPase activity;2.01482440270308e-10!GO:0006793;phosphorus metabolic process;2.69290712856688e-10!GO:0006796;phosphate metabolic process;2.69290712856688e-10!GO:0042623;ATPase activity, coupled;2.90676010438767e-10!GO:0050794;regulation of cellular process;3.05363163941266e-10!GO:0004842;ubiquitin-protein ligase activity;3.06931731261023e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.97776167369659e-10!GO:0006281;DNA repair;4.48882223290102e-10!GO:0005635;nuclear envelope;5.17045727894391e-10!GO:0005794;Golgi apparatus;5.78796600491541e-10!GO:0019787;small conjugating protein ligase activity;9.05765771439457e-10!GO:0009259;ribonucleotide metabolic process;9.15656423185807e-10!GO:0048193;Golgi vesicle transport;1.11087141046996e-09!GO:0005768;endosome;1.15367048051595e-09!GO:0051276;chromosome organization and biogenesis;1.17780484428717e-09!GO:0006163;purine nucleotide metabolic process;1.29753482843967e-09!GO:0006164;purine nucleotide biosynthetic process;1.40287323893795e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.64546544562092e-09!GO:0007049;cell cycle;1.64546544562092e-09!GO:0009150;purine ribonucleotide metabolic process;1.66548270692744e-09!GO:0051246;regulation of protein metabolic process;1.84228345485704e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.0288334936184e-09!GO:0015078;hydrogen ion transmembrane transporter activity;2.06454448700238e-09!GO:0009260;ribonucleotide biosynthetic process;2.63795557656304e-09!GO:0051082;unfolded protein binding;3.611431066882e-09!GO:0004386;helicase activity;4.1138327533717e-09!GO:0017038;protein import;4.13136870279145e-09!GO:0042254;ribosome biogenesis and assembly;4.97520289184726e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.11760192678562e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.37745308372955e-09!GO:0016310;phosphorylation;6.43213679998251e-09!GO:0019829;cation-transporting ATPase activity;6.83149014145378e-09!GO:0008565;protein transporter activity;8.49601254931153e-09!GO:0009056;catabolic process;9.11712194130842e-09!GO:0015986;ATP synthesis coupled proton transport;9.40532820001628e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.40532820001628e-09!GO:0008026;ATP-dependent helicase activity;1.29178323489764e-08!GO:0044453;nuclear membrane part;1.51490380018943e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.53972150728616e-08!GO:0031965;nuclear membrane;1.81497012613258e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.17059382049647e-08!GO:0007243;protein kinase cascade;2.17525158818964e-08!GO:0016568;chromatin modification;2.25271392158817e-08!GO:0016469;proton-transporting two-sector ATPase complex;3.38734343826368e-08!GO:0050657;nucleic acid transport;3.41462365562898e-08!GO:0051236;establishment of RNA localization;3.41462365562898e-08!GO:0050658;RNA transport;3.41462365562898e-08!GO:0065009;regulation of a molecular function;3.4703120583057e-08!GO:0006366;transcription from RNA polymerase II promoter;4.02351345202885e-08!GO:0051188;cofactor biosynthetic process;4.2036196159171e-08!GO:0009060;aerobic respiration;4.75374208461926e-08!GO:0016881;acid-amino acid ligase activity;4.75979448906543e-08!GO:0065002;intracellular protein transport across a membrane;5.40561685523237e-08!GO:0006403;RNA localization;5.64927277895958e-08!GO:0019222;regulation of metabolic process;5.65588546363321e-08!GO:0005643;nuclear pore;5.98380000004777e-08!GO:0009719;response to endogenous stimulus;6.91608084867001e-08!GO:0006754;ATP biosynthetic process;7.46957008599085e-08!GO:0006753;nucleoside phosphate metabolic process;7.46957008599085e-08!GO:0005783;endoplasmic reticulum;8.17457809381724e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.47015010832461e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.47015010832461e-08!GO:0009142;nucleoside triphosphate biosynthetic process;9.66344822992809e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.66344822992809e-08!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.7051717018939e-08!GO:0005839;proteasome core complex (sensu Eukaryota);1.15118125020532e-07!GO:0009055;electron carrier activity;1.31849549300556e-07!GO:0043566;structure-specific DNA binding;1.59003194460568e-07!GO:0007242;intracellular signaling cascade;1.6516597230773e-07!GO:0005694;chromosome;1.7400801660389e-07!GO:0051726;regulation of cell cycle;1.9729120434573e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.98781888818447e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.98781888818447e-07!GO:0048523;negative regulation of cellular process;2.01710892959441e-07!GO:0009199;ribonucleoside triphosphate metabolic process;2.15121694188062e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.44441331798313e-07!GO:0000074;regulation of progression through cell cycle;2.88474740140209e-07!GO:0046034;ATP metabolic process;3.05740825844089e-07!GO:0006399;tRNA metabolic process;3.31233649331246e-07!GO:0009141;nucleoside triphosphate metabolic process;3.40815401700688e-07!GO:0003713;transcription coactivator activity;3.79590094620585e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.10723097867033e-07!GO:0045333;cellular respiration;4.13442477201767e-07!GO:0006417;regulation of translation;4.46903719907585e-07!GO:0004298;threonine endopeptidase activity;4.99070507966619e-07!GO:0009108;coenzyme biosynthetic process;5.12654351496056e-07!GO:0030532;small nuclear ribonucleoprotein complex;5.46796301025316e-07!GO:0045786;negative regulation of progression through cell cycle;5.46796301025316e-07!GO:0050789;regulation of biological process;5.71173663027463e-07!GO:0005770;late endosome;6.75115451428094e-07!GO:0051170;nuclear import;7.64045611957511e-07!GO:0051028;mRNA transport;7.78500350556415e-07!GO:0003697;single-stranded DNA binding;8.03828391743719e-07!GO:0046930;pore complex;9.69913849640147e-07!GO:0009615;response to virus;1.14430484128862e-06!GO:0022402;cell cycle process;1.18531958673568e-06!GO:0031324;negative regulation of cellular metabolic process;1.21571723289844e-06!GO:0044432;endoplasmic reticulum part;1.37137968704522e-06!GO:0016072;rRNA metabolic process;1.38936976133273e-06!GO:0032446;protein modification by small protein conjugation;1.38936976133273e-06!GO:0006606;protein import into nucleus;1.63222898852616e-06!GO:0006333;chromatin assembly or disassembly;2.04936455789254e-06!GO:0006364;rRNA processing;2.52000586809823e-06!GO:0045259;proton-transporting ATP synthase complex;2.53253515349494e-06!GO:0031323;regulation of cellular metabolic process;2.54883933150348e-06!GO:0016567;protein ubiquitination;2.66364712978249e-06!GO:0065004;protein-DNA complex assembly;2.94568740300159e-06!GO:0006099;tricarboxylic acid cycle;3.35198005141285e-06!GO:0046356;acetyl-CoA catabolic process;3.35198005141285e-06!GO:0009117;nucleotide metabolic process;3.67045947050698e-06!GO:0043065;positive regulation of apoptosis;3.79875799347736e-06!GO:0008047;enzyme activator activity;3.83390304192238e-06!GO:0006461;protein complex assembly;4.01349272765034e-06!GO:0044427;chromosomal part;4.18551478115998e-06!GO:0048519;negative regulation of biological process;4.19718428145539e-06!GO:0043069;negative regulation of programmed cell death;4.38883802617206e-06!GO:0016740;transferase activity;4.51770726992741e-06!GO:0006752;group transfer coenzyme metabolic process;4.77970706009085e-06!GO:0051187;cofactor catabolic process;4.94977719023234e-06!GO:0006084;acetyl-CoA metabolic process;5.12125788369045e-06!GO:0043066;negative regulation of apoptosis;5.17014328098772e-06!GO:0016564;transcription repressor activity;5.2382507705165e-06!GO:0043068;positive regulation of programmed cell death;5.65114207744932e-06!GO:0016563;transcription activator activity;5.78150912408319e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.80339347566111e-06!GO:0000151;ubiquitin ligase complex;6.16562231292599e-06!GO:0000245;spliceosome assembly;7.15006633947602e-06!GO:0005525;GTP binding;7.29862720722604e-06!GO:0007264;small GTPase mediated signal transduction;7.3960003998421e-06!GO:0016779;nucleotidyltransferase activity;9.29203657088456e-06!GO:0005793;ER-Golgi intermediate compartment;1.02308692221092e-05!GO:0019899;enzyme binding;1.026627179983e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.02917282213323e-05!GO:0004812;aminoacyl-tRNA ligase activity;1.02917282213323e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.02917282213323e-05!GO:0031326;regulation of cellular biosynthetic process;1.03742795295599e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.06937232688318e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.10455958220244e-05!GO:0005789;endoplasmic reticulum membrane;1.11615804531359e-05!GO:0048475;coated membrane;1.18488868087554e-05!GO:0030117;membrane coat;1.18488868087554e-05!GO:0007005;mitochondrion organization and biogenesis;1.19005951591073e-05!GO:0050790;regulation of catalytic activity;1.20668407511585e-05!GO:0006917;induction of apoptosis;1.25444384911057e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.26012063501092e-05!GO:0005774;vacuolar membrane;1.41616563516232e-05!GO:0006916;anti-apoptosis;1.46316723764907e-05!GO:0030120;vesicle coat;1.62203607912022e-05!GO:0030662;coated vesicle membrane;1.62203607912022e-05!GO:0012502;induction of programmed cell death;1.9065868545097e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.91019327221985e-05!GO:0043038;amino acid activation;1.91971879786869e-05!GO:0006418;tRNA aminoacylation for protein translation;1.91971879786869e-05!GO:0043039;tRNA aminoacylation;1.91971879786869e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.17288330050414e-05!GO:0009109;coenzyme catabolic process;2.39652122060515e-05!GO:0016481;negative regulation of transcription;2.79452153002855e-05!GO:0006613;cotranslational protein targeting to membrane;2.81184332550644e-05!GO:0003924;GTPase activity;2.81184332550644e-05!GO:0000785;chromatin;3.55168129405121e-05!GO:0009889;regulation of biosynthetic process;3.71934674718398e-05!GO:0016197;endosome transport;3.7249702387828e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;4.1739465878124e-05!GO:0015399;primary active transmembrane transporter activity;4.1739465878124e-05!GO:0008654;phospholipid biosynthetic process;4.26595131702826e-05!GO:0044440;endosomal part;4.26595131702826e-05!GO:0010008;endosome membrane;4.26595131702826e-05!GO:0003724;RNA helicase activity;4.54234867316582e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;4.54234867316582e-05!GO:0009892;negative regulation of metabolic process;4.73190025936031e-05!GO:0044437;vacuolar part;4.74738929638501e-05!GO:0051336;regulation of hydrolase activity;4.84283144459922e-05!GO:0010468;regulation of gene expression;4.94012221023165e-05!GO:0031252;leading edge;5.17003334349874e-05!GO:0009967;positive regulation of signal transduction;6.03873871924616e-05!GO:0048522;positive regulation of cellular process;7.8312109163546e-05!GO:0005096;GTPase activator activity;8.86280349128312e-05!GO:0005765;lysosomal membrane;9.17696639318163e-05!GO:0051168;nuclear export;0.000104354096937626!GO:0032561;guanyl ribonucleotide binding;0.000107063531596247!GO:0019001;guanyl nucleotide binding;0.000107063531596247!GO:0008632;apoptotic program;0.000124811298044933!GO:0044262;cellular carbohydrate metabolic process;0.000127056446358965!GO:0030695;GTPase regulator activity;0.000134332371846671!GO:0005885;Arp2/3 protein complex;0.000146527926113756!GO:0007034;vacuolar transport;0.000160796729813741!GO:0022890;inorganic cation transmembrane transporter activity;0.000161680424896188!GO:0005762;mitochondrial large ribosomal subunit;0.000173068948871472!GO:0000315;organellar large ribosomal subunit;0.000173068948871472!GO:0003729;mRNA binding;0.00017797006343951!GO:0006401;RNA catabolic process;0.000184378589251603!GO:0006612;protein targeting to membrane;0.000192475023484815!GO:0006950;response to stress;0.000199720810335877!GO:0006091;generation of precursor metabolites and energy;0.000202954841895426!GO:0015992;proton transport;0.000207013976614297!GO:0006818;hydrogen transport;0.000211121283209685!GO:0008234;cysteine-type peptidase activity;0.000217061704654366!GO:0031497;chromatin assembly;0.000240766548039395!GO:0006350;transcription;0.000241767364803772!GO:0065007;biological regulation;0.000264396605554216!GO:0005813;centrosome;0.000280205952489652!GO:0043021;ribonucleoprotein binding;0.000294558079459125!GO:0003690;double-stranded DNA binding;0.000299637594730525!GO:0031902;late endosome membrane;0.000307297008390502!GO:0003714;transcription corepressor activity;0.000315677604822019!GO:0006334;nucleosome assembly;0.000328805209356045!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000338159969581398!GO:0004674;protein serine/threonine kinase activity;0.000367624575392015!GO:0005798;Golgi-associated vesicle;0.000391211656480401!GO:0006260;DNA replication;0.000447681620162454!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.000467321948073186!GO:0007050;cell cycle arrest;0.00048033375471783!GO:0048518;positive regulation of biological process;0.000481132720791284!GO:0008186;RNA-dependent ATPase activity;0.000507577462550781!GO:0016044;membrane organization and biogenesis;0.000521105386207893!GO:0005769;early endosome;0.000620748695926564!GO:0009165;nucleotide biosynthetic process;0.000623055937215797!GO:0006402;mRNA catabolic process;0.000644504638310828!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000663102851063389!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000706873814800944!GO:0051427;hormone receptor binding;0.000756792831656762!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000761558050630149!GO:0043087;regulation of GTPase activity;0.000766549834145406!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00078374075345352!GO:0005667;transcription factor complex;0.000812497265798448!GO:0005815;microtubule organizing center;0.000819888755616929!GO:0007265;Ras protein signal transduction;0.000826264652528501!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00088389111334975!GO:0043623;cellular protein complex assembly;0.000897359090504232!GO:0043492;ATPase activity, coupled to movement of substances;0.000933889346736514!GO:0007041;lysosomal transport;0.000990119684927083!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00100465493967531!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00126160161509624!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0012910138793703!GO:0030384;phosphoinositide metabolic process;0.00133633960074019!GO:0035257;nuclear hormone receptor binding;0.00135692046864669!GO:0004004;ATP-dependent RNA helicase activity;0.00139137336188329!GO:0044431;Golgi apparatus part;0.00139687772184456!GO:0031982;vesicle;0.0014371488165008!GO:0046489;phosphoinositide biosynthetic process;0.00145054495317422!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00150298303676401!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00150298303676401!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00150298303676401!GO:0015980;energy derivation by oxidation of organic compounds;0.00150298303676401!GO:0006414;translational elongation;0.00151393662263076!GO:0005083;small GTPase regulator activity;0.00184076849426099!GO:0046474;glycerophospholipid biosynthetic process;0.00192097291100498!GO:0000314;organellar small ribosomal subunit;0.00193327486899247!GO:0005763;mitochondrial small ribosomal subunit;0.00193327486899247!GO:0032940;secretion by cell;0.00200816540723503!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00204117749548603!GO:0019318;hexose metabolic process;0.00208279338609466!GO:0006650;glycerophospholipid metabolic process;0.00226473700210438!GO:0001726;ruffle;0.0024232843695036!GO:0019843;rRNA binding;0.0024369144190316!GO:0031072;heat shock protein binding;0.0024427251824307!GO:0043681;protein import into mitochondrion;0.0024427251824307!GO:0005996;monosaccharide metabolic process;0.00252434348148845!GO:0003746;translation elongation factor activity;0.00253415475947269!GO:0016363;nuclear matrix;0.00266247057134595!GO:0008270;zinc ion binding;0.00314075501499239!GO:0005741;mitochondrial outer membrane;0.0031476174641066!GO:0007040;lysosome organization and biogenesis;0.0033496530755098!GO:0003899;DNA-directed RNA polymerase activity;0.00350452571797093!GO:0016491;oxidoreductase activity;0.00359606669596917!GO:0004722;protein serine/threonine phosphatase activity;0.00380151599240695!GO:0004197;cysteine-type endopeptidase activity;0.00405624213624869!GO:0033116;ER-Golgi intermediate compartment membrane;0.00415750274563981!GO:0030693;caspase activity;0.00423646070818078!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00433049388827953!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00433049388827953!GO:0000278;mitotic cell cycle;0.00435610810411783!GO:0031410;cytoplasmic vesicle;0.00439087032588238!GO:0045892;negative regulation of transcription, DNA-dependent;0.00466078485576485!GO:0006383;transcription from RNA polymerase III promoter;0.00469736266475762!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00473383215458806!GO:0051252;regulation of RNA metabolic process;0.00486592515832506!GO:0051539;4 iron, 4 sulfur cluster binding;0.00486592515832506!GO:0006626;protein targeting to mitochondrion;0.00503755951332049!GO:0046483;heterocycle metabolic process;0.00518199602396765!GO:0051540;metal cluster binding;0.00518657267614681!GO:0051536;iron-sulfur cluster binding;0.00518657267614681!GO:0045454;cell redox homeostasis;0.00522751458482097!GO:0006261;DNA-dependent DNA replication;0.00523325968599192!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00525428861202746!GO:0006891;intra-Golgi vesicle-mediated transport;0.00546622718078341!GO:0048500;signal recognition particle;0.00574031888360589!GO:0000287;magnesium ion binding;0.00579632188989094!GO:0006611;protein export from nucleus;0.00588673316398447!GO:0031625;ubiquitin protein ligase binding;0.00611655872381561!GO:0016251;general RNA polymerase II transcription factor activity;0.00612042669061512!GO:0033033;negative regulation of myeloid cell apoptosis;0.00628164966487278!GO:0001803;regulation of type III hypersensitivity;0.00628164966487278!GO:0032733;positive regulation of interleukin-10 production;0.00628164966487278!GO:0033025;regulation of mast cell apoptosis;0.00628164966487278!GO:0001805;positive regulation of type III hypersensitivity;0.00628164966487278!GO:0033023;mast cell homeostasis;0.00628164966487278!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.00628164966487278!GO:0033032;regulation of myeloid cell apoptosis;0.00628164966487278!GO:0001802;type III hypersensitivity;0.00628164966487278!GO:0033028;myeloid cell apoptosis;0.00628164966487278!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.00628164966487278!GO:0033026;negative regulation of mast cell apoptosis;0.00628164966487278!GO:0033024;mast cell apoptosis;0.00628164966487278!GO:0046467;membrane lipid biosynthetic process;0.00630427311257509!GO:0046914;transition metal ion binding;0.00641271388154301!GO:0008287;protein serine/threonine phosphatase complex;0.00701249538849359!GO:0032774;RNA biosynthetic process;0.0070525259192511!GO:0031988;membrane-bound vesicle;0.0071410728178176!GO:0006302;double-strand break repair;0.00734617412616506!GO:0006352;transcription initiation;0.0074223508402931!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00743347135328931!GO:0015002;heme-copper terminal oxidase activity;0.00743347135328931!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00743347135328931!GO:0004129;cytochrome-c oxidase activity;0.00743347135328931!GO:0045449;regulation of transcription;0.00752583221231297!GO:0043281;regulation of caspase activity;0.00763409607467527!GO:0006310;DNA recombination;0.00770714811177358!GO:0009607;response to biotic stimulus;0.0077335582685696!GO:0006914;autophagy;0.00775302953550423!GO:0032318;regulation of Ras GTPase activity;0.00775302953550423!GO:0006351;transcription, DNA-dependent;0.00779105271833675!GO:0045792;negative regulation of cell size;0.00791796746322481!GO:0043488;regulation of mRNA stability;0.00796246562116982!GO:0043487;regulation of RNA stability;0.00796246562116982!GO:0005684;U2-dependent spliceosome;0.00796502725763378!GO:0030027;lamellipodium;0.00803407362500837!GO:0008033;tRNA processing;0.00814170773059375!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00829865936315477!GO:0045047;protein targeting to ER;0.00829865936315477!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00837698721585849!GO:0030258;lipid modification;0.00847461738321364!GO:0008333;endosome to lysosome transport;0.00853545792888912!GO:0007033;vacuole organization and biogenesis;0.00857017979933297!GO:0004177;aminopeptidase activity;0.0086068192856513!GO:0051325;interphase;0.0087084195155306!GO:0051090;regulation of transcription factor activity;0.00898070352885192!GO:0030663;COPI coated vesicle membrane;0.00900824789616379!GO:0030126;COPI vesicle coat;0.00900824789616379!GO:0031968;organelle outer membrane;0.00900824789616379!GO:0007006;mitochondrial membrane organization and biogenesis;0.00915768666856862!GO:0008312;7S RNA binding;0.00923415600089678!GO:0030308;negative regulation of cell growth;0.00947135629314343!GO:0005975;carbohydrate metabolic process;0.00966591316069075!GO:0051329;interphase of mitotic cell cycle;0.00969138126217777!GO:0016853;isomerase activity;0.00974878241448142!GO:0046822;regulation of nucleocytoplasmic transport;0.00976228880469173!GO:0005637;nuclear inner membrane;0.00996008624659155!GO:0006897;endocytosis;0.00999340826642412!GO:0010324;membrane invagination;0.00999340826642412!GO:0019867;outer membrane;0.0100439712728019!GO:0046519;sphingoid metabolic process;0.010045834562074!GO:0006497;protein amino acid lipidation;0.0104345104336879!GO:0045045;secretory pathway;0.0104763632200669!GO:0016791;phosphoric monoester hydrolase activity;0.0105376321330326!GO:0009966;regulation of signal transduction;0.0111595630864547!GO:0051087;chaperone binding;0.0112015878610424!GO:0000118;histone deacetylase complex;0.0112289435016923!GO:0051920;peroxiredoxin activity;0.0113467682010956!GO:0030041;actin filament polymerization;0.0113961982340792!GO:0000786;nucleosome;0.0118118499624244!GO:0016272;prefoldin complex;0.0120030048278651!GO:0030867;rough endoplasmic reticulum membrane;0.0120307475059479!GO:0048002;antigen processing and presentation of peptide antigen;0.0120862557162332!GO:0030118;clathrin coat;0.0122575345318516!GO:0006643;membrane lipid metabolic process;0.0122767133182121!GO:0048487;beta-tubulin binding;0.0124558244674246!GO:0019864;IgG binding;0.0124984540609577!GO:0051789;response to protein stimulus;0.012564580931218!GO:0006986;response to unfolded protein;0.012564580931218!GO:0048468;cell development;0.0127237777875556!GO:0016023;cytoplasmic membrane-bound vesicle;0.0127594470993264!GO:0045926;negative regulation of growth;0.0127929988879024!GO:0003725;double-stranded RNA binding;0.012856332240584!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0131532288226298!GO:0016584;nucleosome positioning;0.0133236588448231!GO:0030137;COPI-coated vesicle;0.0133421412843821!GO:0008624;induction of apoptosis by extracellular signals;0.0134195045008456!GO:0000139;Golgi membrane;0.0134195045008456!GO:0006607;NLS-bearing substrate import into nucleus;0.0138290227551679!GO:0016301;kinase activity;0.0138615813470759!GO:0005048;signal sequence binding;0.0138714291974164!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0140944936325688!GO:0006672;ceramide metabolic process;0.0140944936325688!GO:0030658;transport vesicle membrane;0.0141982858929418!GO:0006919;caspase activation;0.0151494489270378!GO:0006007;glucose catabolic process;0.0151494489270378!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0152902641061293!GO:0006506;GPI anchor biosynthetic process;0.0153678425625074!GO:0008320;protein transmembrane transporter activity;0.0154963268641299!GO:0016788;hydrolase activity, acting on ester bonds;0.0156314035772625!GO:0043022;ribosome binding;0.015790579831248!GO:0005869;dynactin complex;0.015790579831248!GO:0006740;NADPH regeneration;0.016500686890938!GO:0006098;pentose-phosphate shunt;0.016500686890938!GO:0002757;immune response-activating signal transduction;0.0166919100642338!GO:0005099;Ras GTPase activator activity;0.0166943165387784!GO:0030518;steroid hormone receptor signaling pathway;0.0169002890161421!GO:0032763;regulation of mast cell cytokine production;0.0170697008172783!GO:0032762;mast cell cytokine production;0.0170697008172783!GO:0008180;signalosome;0.0172440147689692!GO:0006405;RNA export from nucleus;0.0172895248487277!GO:0051235;maintenance of localization;0.0177901294524335!GO:0000209;protein polyubiquitination;0.0177901294524335!GO:0046966;thyroid hormone receptor binding;0.0178638029209595!GO:0043280;positive regulation of caspase activity;0.0178959529752801!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0183676485235692!GO:0010257;NADH dehydrogenase complex assembly;0.0183676485235692!GO:0033108;mitochondrial respiratory chain complex assembly;0.0183676485235692!GO:0004527;exonuclease activity;0.0184118006473065!GO:0006376;mRNA splice site selection;0.0186187755344787!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0186187755344787!GO:0016811;hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides;0.0188103360811742!GO:0004218;cathepsin S activity;0.0188874241200042!GO:0042802;identical protein binding;0.0189708016142259!GO:0009893;positive regulation of metabolic process;0.0196144736261886!GO:0008637;apoptotic mitochondrial changes;0.0198246585138114!GO:0004518;nuclease activity;0.020057606412152!GO:0030176;integral to endoplasmic reticulum membrane;0.020057606412152!GO:0006213;pyrimidine nucleoside metabolic process;0.0202708945525647!GO:0046983;protein dimerization activity;0.0202708945525647!GO:0006509;membrane protein ectodomain proteolysis;0.0205238021839864!GO:0033619;membrane protein proteolysis;0.0205238021839864!GO:0006458;'de novo' protein folding;0.0206783277573732!GO:0051084;'de novo' posttranslational protein folding;0.0206783277573732!GO:0022884;macromolecule transmembrane transporter activity;0.0211273526005533!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0211273526005533!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0212530836807886!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.021490050226533!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0215164916433477!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0215164916433477!GO:0009126;purine nucleoside monophosphate metabolic process;0.0215164916433477!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0215164916433477!GO:0003711;transcription elongation regulator activity;0.0220682689397713!GO:0030833;regulation of actin filament polymerization;0.0224316139842765!GO:0006595;polyamine metabolic process;0.0224316139842765!GO:0004185;serine carboxypeptidase activity;0.0224316139842765!GO:0051098;regulation of binding;0.0226725426088694!GO:0005669;transcription factor TFIID complex;0.023118235773055!GO:0002764;immune response-regulating signal transduction;0.0237612738058428!GO:0016859;cis-trans isomerase activity;0.0241727972388117!GO:0050811;GABA receptor binding;0.0242665442391608!GO:0042613;MHC class II protein complex;0.0246265373442908!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0250326852123808!GO:0042158;lipoprotein biosynthetic process;0.0251899379381196!GO:0016311;dephosphorylation;0.0252041948085689!GO:0030036;actin cytoskeleton organization and biogenesis;0.0258922449865105!GO:0009161;ribonucleoside monophosphate metabolic process;0.0259652160703104!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0259652160703104!GO:0015923;mannosidase activity;0.0260192396657389!GO:0009112;nucleobase metabolic process;0.0264663410323758!GO:0015631;tubulin binding;0.0266305653342765!GO:0017091;AU-rich element binding;0.0267297900824994!GO:0050779;RNA destabilization;0.0267297900824994!GO:0000289;poly(A) tail shortening;0.0267297900824994!GO:0008656;caspase activator activity;0.0269084234918009!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0269208559271165!GO:0006839;mitochondrial transport;0.0275726542713463!GO:0015630;microtubule cytoskeleton;0.0275869428491318!GO:0030660;Golgi-associated vesicle membrane;0.0284031136674755!GO:0030145;manganese ion binding;0.0288658920362679!GO:0044452;nucleolar part;0.0292783852304948!GO:0008139;nuclear localization sequence binding;0.0292783852304948!GO:0022415;viral reproductive process;0.0300072959414207!GO:0001816;cytokine production;0.0303856411623476!GO:0006013;mannose metabolic process;0.0306407256333338!GO:0000726;non-recombinational repair;0.0310386842011527!GO:0008538;proteasome activator activity;0.0311677358946686!GO:0000303;response to superoxide;0.0311992661799491!GO:0009116;nucleoside metabolic process;0.0312988434063466!GO:0019883;antigen processing and presentation of endogenous antigen;0.031300901095844!GO:0006289;nucleotide-excision repair;0.0317552215383029!GO:0000305;response to oxygen radical;0.0321953470169911!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0322061919406701!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.032245188487452!GO:0032760;positive regulation of tumor necrosis factor production;0.0331584800655846!GO:0005832;chaperonin-containing T-complex;0.0331895188663859!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0333963428887869!GO:0045947;negative regulation of translational initiation;0.0334072121839104!GO:0000082;G1/S transition of mitotic cell cycle;0.0337002906356738!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0338111250698237!GO:0000049;tRNA binding;0.0338266564047333!GO:0022403;cell cycle phase;0.035153737037402!GO:0045309;protein phosphorylated amino acid binding;0.0357868172540923!GO:0030119;AP-type membrane coat adaptor complex;0.0357868172540923!GO:0006778;porphyrin metabolic process;0.0359897258331003!GO:0033013;tetrapyrrole metabolic process;0.0359897258331003!GO:0032640;tumor necrosis factor production;0.0360018163833208!GO:0006505;GPI anchor metabolic process;0.0361568431442945!GO:0016605;PML body;0.0364349444540294!GO:0051101;regulation of DNA binding;0.0365215081098951!GO:0006644;phospholipid metabolic process;0.0366377692607238!GO:0022406;membrane docking;0.0371211953128016!GO:0048278;vesicle docking;0.0371211953128016!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0375171271406923!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0377294907883404!GO:0007021;tubulin folding;0.0379316863818923!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0385196658597701!GO:0006006;glucose metabolic process;0.0385196658597701!GO:0004659;prenyltransferase activity;0.0385631830861006!GO:0008017;microtubule binding;0.0387499694236922!GO:0008168;methyltransferase activity;0.0392207853360434!GO:0051223;regulation of protein transport;0.0396724242456895!GO:0031647;regulation of protein stability;0.0396849714881119!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0396849714881119!GO:0033367;protein localization in mast cell secretory granule;0.0396849714881119!GO:0033365;protein localization in organelle;0.0396849714881119!GO:0033371;T cell secretory granule organization and biogenesis;0.0396849714881119!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0396849714881119!GO:0033375;protease localization in T cell secretory granule;0.0396849714881119!GO:0042629;mast cell granule;0.0396849714881119!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0396849714881119!GO:0033364;mast cell secretory granule organization and biogenesis;0.0396849714881119!GO:0033380;granzyme B localization in T cell secretory granule;0.0396849714881119!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0396849714881119!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0396849714881119!GO:0033368;protease localization in mast cell secretory granule;0.0396849714881119!GO:0033366;protein localization in secretory granule;0.0396849714881119!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0396849714881119!GO:0033374;protein localization in T cell secretory granule;0.0396849714881119!GO:0006904;vesicle docking during exocytosis;0.0396849714881119!GO:0043621;protein self-association;0.0396849714881119!GO:0005057;receptor signaling protein activity;0.040239638834448!GO:0030880;RNA polymerase complex;0.0403256278643417!GO:0006733;oxidoreduction coenzyme metabolic process;0.040514380737066!GO:0000339;RNA cap binding;0.0407101721969104!GO:0006355;regulation of transcription, DNA-dependent;0.0410263069679346!GO:0006367;transcription initiation from RNA polymerase II promoter;0.041467145307292!GO:0031901;early endosome membrane;0.0414873739332896!GO:0035258;steroid hormone receptor binding;0.0419062731561518!GO:0006516;glycoprotein catabolic process;0.042887220612614!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0428991068967244!GO:0046839;phospholipid dephosphorylation;0.042946164455286!GO:0016741;transferase activity, transferring one-carbon groups;0.0437391620730101!GO:0015036;disulfide oxidoreductase activity;0.043877875261318!GO:0047485;protein N-terminus binding;0.0440153211818273!GO:0060090;molecular adaptor activity;0.0449997780390739!GO:0043300;regulation of leukocyte degranulation;0.0450054580379861!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0458053386391615!GO:0009119;ribonucleoside metabolic process;0.0459669503410896!GO:0006368;RNA elongation from RNA polymerase II promoter;0.046063871240221!GO:0043433;negative regulation of transcription factor activity;0.0463010595688493!GO:0001784;phosphotyrosine binding;0.0464613369596452!GO:0006354;RNA elongation;0.0472986125113968!GO:0005092;GDP-dissociation inhibitor activity;0.0473367376709978!GO:0031124;mRNA 3'-end processing;0.0477483146010878!GO:0000119;mediator complex;0.047914404449098!GO:0051219;phosphoprotein binding;0.0482372850714243!GO:0045893;positive regulation of transcription, DNA-dependent;0.0494184214542123!GO:0042168;heme metabolic process;0.0494872350634887!GO:0019783;small conjugating protein-specific protease activity;0.0495203261792065
|sample_id=11800
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
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|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11800-124C9;search_select_hide=table117:FF:11800-124C9
}}
}}

Latest revision as of 18:21, 4 June 2020

Name:CD14-CD16+ Monocytes, donor2
Species:Human (Homo sapiens)
Library ID:CNhs13207
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
age23
cell typemonocyte
cell lineNA
companyNA
collaborationMichael Rehli (University of Regensberg)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number29
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005837
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13207 CAGE DRX008168 DRR009040
Accession ID Hg19

Library idBAMCTSS
CNhs13207 DRZ000465 DRZ001850
Accession ID Hg38

Library idBAMCTSS
CNhs13207 DRZ011815 DRZ013200
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.114
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.0788
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.296
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0847
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.112
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.119
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.476
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.145
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.145
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.387
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.246
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.21
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.578
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.145
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.0839
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.12
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.0788
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.034
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.405
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.855
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.579
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.53
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.581
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.446
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.145
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.679
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.0788
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.145
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.362
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.62
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.303
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.504
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral1.162
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.0788
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.3
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood1.194
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0.174
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.53
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.145
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.0788
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole1.051
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13207

Jaspar motifP-value
MA0002.24.88395e-7
MA0003.10.0551
MA0004.10.559
MA0006.10.88
MA0007.10.974
MA0009.10.137
MA0014.10.654
MA0017.10.00875
MA0018.20.1
MA0019.10.611
MA0024.10.0133
MA0025.10.158
MA0027.10.74
MA0028.10.269
MA0029.10.255
MA0030.10.284
MA0031.10.525
MA0035.20.885
MA0038.10.028
MA0039.20.554
MA0040.10.43
MA0041.10.452
MA0042.10.278
MA0043.10.0674
MA0046.10.0444
MA0047.20.132
MA0048.10.803
MA0050.14.06443e-13
MA0051.12.25679e-6
MA0052.10.741
MA0055.10.815
MA0057.10.929
MA0058.10.347
MA0059.10.549
MA0060.11.87242e-5
MA0061.10.00388
MA0062.22.34337e-5
MA0065.20.0103
MA0066.10.149
MA0067.10.00718
MA0068.10.456
MA0069.10.913
MA0070.10.00806
MA0071.10.044
MA0072.10.596
MA0073.10.407
MA0074.10.316
MA0076.10.222
MA0077.10.064
MA0078.10.836
MA0079.20.655
MA0080.27.75163e-17
MA0081.14.53589e-5
MA0083.10.409
MA0084.10.395
MA0087.10.308
MA0088.10.464
MA0090.10.0049
MA0091.10.325
MA0092.10.413
MA0093.10.632
MA0099.20.621
MA0100.10.936
MA0101.10.036
MA0102.25.46128e-4
MA0103.10.531
MA0104.20.569
MA0105.12.21655e-5
MA0106.10.591
MA0107.10.0143
MA0108.25.55231e-10
MA0111.10.256
MA0112.26.5678e-4
MA0113.10.775
MA0114.10.063
MA0115.10.305
MA0116.13.67642e-5
MA0117.10.498
MA0119.10.328
MA0122.10.691
MA0124.10.243
MA0125.10.235
MA0131.10.637
MA0135.10.935
MA0136.13.20329e-20
MA0137.20.49
MA0138.20.724
MA0139.10.594
MA0140.10.905
MA0141.10.0158
MA0142.10.384
MA0143.10.81
MA0144.10.899
MA0145.10.23
MA0146.10.0249
MA0147.10.625
MA0148.10.563
MA0149.10.116
MA0150.10.1
MA0152.10.0322
MA0153.10.00547
MA0154.10.00214
MA0155.10.876
MA0156.14.32693e-11
MA0157.10.279
MA0159.10.0741
MA0160.10.00986
MA0162.10.639
MA0163.11.08892e-12
MA0164.10.907
MA0258.10.0103
MA0259.10.981



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13207

Novel motifP-value
10.101
100.0232
1000.919
1010.34
1020.414
1030.266
1040.648
1050.285
1060.00816
1070.629
1080.905
1090.025
110.147
1100.192
1110.0176
1120.164
1130.513
1140.00287
1150.436
1160.981
1170.019
1180.0982
1190.172
120.354
1200.53
1210.95
1220.863
1234.08119e-4
1240.474
1250.0486
1260.156
1270.294
1280.0639
1290.967
130.0979
1300.268
1310.973
1320.0541
1330.0537
1340.671
1350.191
1360.631
1373.73245e-4
1380.259
1390.0139
140.318
1400.271
1410.723
1420.921
1430.0992
1440.914
1450.33
1460.791
1470.347
1480.0298
1490.619
150.108
1500.48
1510.24
1520.222
1530.459
1540.793
1550.0397
1560.883
1570.95
1580.144
1590.376
160.394
1600.515
1610.416
1620.699
1630.246
1640.123
1650.0379
1660.295
1670.0742
1680.649
1690.0166
170.345
180.196
190.281
20.803
200.49
210.412
220.253
230.336
240.332
250.125
260.0621
270.459
280.535
290.0652
30.0601
300.368
310.602
320.823
330.235
340.576
350.159
360.0513
370.0488
380.515
390.645
40.904
400.194
410.0743
420.279
430.0723
440.448
450.866
460.105
470.314
480.338
490.0877
50.133
500.995
510.394
520.347
530.318
540.417
550.407
560.769
570.752
580.027
590.119
60.994
600.0344
610.172
620.00662
630.48
640.342
650.374
660.268
670.217
680.983
690.509
70.147
700.0165
710.0436
720.299
730.129
740.494
750.0336
760.293
770.585
780.226
790.254
80.241
800.373
810.176
820.122
830.936
840.786
850.0501
860.0973
870.176
880.47
890.821
90.307
900.0815
910.43
920.385
930.399
940.015
950.0516
960.311
970.929
980.146
990.0808



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13207


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000875 (non-classical monocyte)
0002396 (CD14-low, CD16-positive monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0011100 (human CD14-CD16-positive Monocytes sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)

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