FF:11931-125I5: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005033 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008173;DRR009045;DRZ000470;DRZ001855;DRZ011820;DRZ013205 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000764,CL:0000548,CL:0000763,CL:0002371,CL:0000255,CL:0000558 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0011169 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD34%2520cells%2520differentiated%2520to%2520erythrocyte%2520lineage%252c%2520biol_%2520rep1.CNhs13552.11931-125I5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD34%2520cells%2520differentiated%2520to%2520erythrocyte%2520lineage%252c%2520biol_%2520rep1.CNhs13552.11931-125I5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD34%2520cells%2520differentiated%2520to%2520erythrocyte%2520lineage%252c%2520biol_%2520rep1.CNhs13552.11931-125I5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD34%2520cells%2520differentiated%2520to%2520erythrocyte%2520lineage%252c%2520biol_%2520rep1.CNhs13552.11931-125I5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD34%2520cells%2520differentiated%2520to%2520erythrocyte%2520lineage%252c%2520biol_%2520rep1.CNhs13552.11931-125I5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11931-125I5 | |id=FF:11931-125I5 | ||
|is_a=EFO:0002091;;FF:0000002;;FF: | |is_a=EFO:0002091;;FF:0000002;;FF:0011169 | ||
|is_obsolete= | |||
|library_id=CNhs13552 | |||
|library_id_phase_based=2:CNhs13552 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11931 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11931 | |||
|name=CD34 cells differentiated to erythrocyte lineage, biol_ rep1 | |name=CD34 cells differentiated to erythrocyte lineage, biol_ rep1 | ||
|namespace= | |namespace= | ||
| Line 44: | Line 63: | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq= | |profile_srnaseq= | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.0742217477949321,0,-0.188737015914636,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0.086096282291454,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.181217354147707,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,-0.14604719089239,0,-0.0969923612426051,0,0,0.122183171701511,0,0,0,0,0,0,0,0,0.086096282291454,0,0.086096282291454,0,0,0.157915829859822,0,0,0,0.15599736967076,0,0,0.157915829859822,0,0,-0.0877514257027229,-0.53978013665276,0.086096282291454,0,0,-0.112873024852543,-0.168149261550142,0.043048141145727,0,0.078957914929911,0,-0.0119390689462524,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0174156789925498,0,0,0,-0.0549201943193819,-0.175005451279734,0,0,0,0,0,0 | |||
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| |||
|rna_box=125 | |rna_box=125 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=5.75 | |rna_weight_ug=5.75 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition=Cells differentiated from CD34 precursors in erythroid lineage (Reticulocytes) Rep 1 | |sample_experimental_condition=Cells differentiated from CD34 precursors in erythroid lineage (Reticulocytes) Rep 1 | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.80564261772772e-294!GO:0043227;membrane-bound organelle;5.59714882016275e-257!GO:0043231;intracellular membrane-bound organelle;9.26196614427829e-257!GO:0043226;organelle;2.44418187315065e-246!GO:0043229;intracellular organelle;1.20002240552545e-245!GO:0044422;organelle part;1.16465556123163e-175!GO:0044446;intracellular organelle part;1.79337750171433e-174!GO:0005737;cytoplasm;2.38443845105251e-159!GO:0005634;nucleus;4.73670795896297e-140!GO:0044237;cellular metabolic process;5.3331847249836e-132!GO:0032991;macromolecular complex;1.96313818762283e-129!GO:0044238;primary metabolic process;1.53436970239201e-123!GO:0044444;cytoplasmic part;8.55840227140304e-118!GO:0043170;macromolecule metabolic process;3.32625174950383e-117!GO:0044428;nuclear part;9.94313756411523e-107!GO:0030529;ribonucleoprotein complex;5.75542093792923e-94!GO:0043233;organelle lumen;5.86821934912659e-89!GO:0031974;membrane-enclosed lumen;5.86821934912659e-89!GO:0003723;RNA binding;5.76190637981575e-87!GO:0043283;biopolymer metabolic process;2.35099519005473e-78!GO:0005739;mitochondrion;1.08799567777345e-73!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.13972513951578e-72!GO:0006259;DNA metabolic process;1.48408127672009e-70!GO:0043234;protein complex;3.97699005663482e-70!GO:0010467;gene expression;6.93266827325747e-63!GO:0031981;nuclear lumen;1.16669367723139e-62!GO:0006396;RNA processing;9.70374207155775e-62!GO:0006412;translation;4.99064776616496e-54!GO:0019538;protein metabolic process;3.46101506168518e-52!GO:0044429;mitochondrial part;2.52716217041374e-51!GO:0016071;mRNA metabolic process;2.82209453264442e-51!GO:0005840;ribosome;1.08709358784585e-50!GO:0005515;protein binding;5.57520201204195e-50!GO:0003676;nucleic acid binding;7.57721829689763e-50!GO:0031967;organelle envelope;1.42317651662586e-49!GO:0031975;envelope;3.63994182326654e-49!GO:0007049;cell cycle;1.66491538905203e-48!GO:0016043;cellular component organization and biogenesis;5.62059334009449e-48!GO:0044267;cellular protein metabolic process;1.50264670754943e-47!GO:0006996;organelle organization and biogenesis;5.39955045685949e-47!GO:0033036;macromolecule localization;7.96678801914584e-47!GO:0044260;cellular macromolecule metabolic process;2.05302660519053e-46!GO:0006397;mRNA processing;7.81877111936393e-46!GO:0008380;RNA splicing;1.05342515780124e-45!GO:0031090;organelle membrane;4.64894413856587e-45!GO:0003735;structural constituent of ribosome;3.96984766096639e-44!GO:0015031;protein transport;1.16663901166059e-43!GO:0009058;biosynthetic process;1.8167846283051e-43!GO:0065003;macromolecular complex assembly;3.56911425809269e-43!GO:0009059;macromolecule biosynthetic process;7.94878627640191e-43!GO:0043228;non-membrane-bound organelle;9.46137181982988e-43!GO:0043232;intracellular non-membrane-bound organelle;9.46137181982988e-43!GO:0005694;chromosome;2.35364995445134e-42!GO:0044249;cellular biosynthetic process;8.17094630012518e-42!GO:0008104;protein localization;1.02628840483448e-41!GO:0045184;establishment of protein localization;3.36450150838531e-41!GO:0005654;nucleoplasm;4.10438232383614e-41!GO:0006974;response to DNA damage stimulus;1.8796486304496e-40!GO:0005829;cytosol;7.25768758920609e-40!GO:0022607;cellular component assembly;2.12867417419726e-39!GO:0022402;cell cycle process;5.22772367871744e-39!GO:0044427;chromosomal part;1.03353190197179e-37!GO:0000278;mitotic cell cycle;1.1714425655751e-37!GO:0051276;chromosome organization and biogenesis;1.22085503319619e-37!GO:0033279;ribosomal subunit;1.41069719540922e-37!GO:0006281;DNA repair;4.0037505456555e-37!GO:0005681;spliceosome;2.85888480996418e-35!GO:0046907;intracellular transport;3.44584094823675e-35!GO:0005740;mitochondrial envelope;4.62323831971758e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.57542296572785e-35!GO:0022403;cell cycle phase;5.5062738579454e-34!GO:0016070;RNA metabolic process;3.09428309386303e-33!GO:0019866;organelle inner membrane;1.07715150823874e-32!GO:0031966;mitochondrial membrane;1.79136415722091e-32!GO:0044451;nucleoplasm part;1.8868084612515e-32!GO:0000166;nucleotide binding;3.68628223261994e-32!GO:0044445;cytosolic part;2.31942708006154e-31!GO:0005743;mitochondrial inner membrane;2.49178965062387e-30!GO:0000087;M phase of mitotic cell cycle;3.4951495693499e-30!GO:0006886;intracellular protein transport;1.13516560121702e-29!GO:0007067;mitosis;1.29798988464536e-29!GO:0000279;M phase;3.17217317444199e-29!GO:0016462;pyrophosphatase activity;6.11738580714118e-29!GO:0006512;ubiquitin cycle;6.50218984261761e-29!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.90889172317199e-29!GO:0016817;hydrolase activity, acting on acid anhydrides;9.70774862719048e-29!GO:0017111;nucleoside-triphosphatase activity;1.55651708214342e-28!GO:0006325;establishment and/or maintenance of chromatin architecture;5.37573807970234e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.21060614887636e-28!GO:0016874;ligase activity;1.39044464215087e-27!GO:0006323;DNA packaging;4.38772588008891e-27!GO:0051649;establishment of cellular localization;1.04581686475922e-26!GO:0009719;response to endogenous stimulus;1.17397276043817e-26!GO:0051301;cell division;1.86707255849718e-26!GO:0051641;cellular localization;5.4436875999281e-26!GO:0006260;DNA replication;1.4807629145277e-25!GO:0016887;ATPase activity;2.62600301126322e-23!GO:0006119;oxidative phosphorylation;2.97656834829884e-23!GO:0044265;cellular macromolecule catabolic process;6.90852853857729e-23!GO:0044455;mitochondrial membrane part;3.30847233157101e-22!GO:0032553;ribonucleotide binding;9.45980542122427e-22!GO:0032555;purine ribonucleotide binding;9.45980542122427e-22!GO:0017076;purine nucleotide binding;1.48388372572637e-21!GO:0006511;ubiquitin-dependent protein catabolic process;1.62457920525608e-21!GO:0019941;modification-dependent protein catabolic process;1.9249029354547e-21!GO:0043632;modification-dependent macromolecule catabolic process;1.9249029354547e-21!GO:0005524;ATP binding;1.96972509407662e-21!GO:0051603;proteolysis involved in cellular protein catabolic process;2.62917498469486e-21!GO:0042623;ATPase activity, coupled;3.74812310387914e-21!GO:0031980;mitochondrial lumen;3.80529056124587e-21!GO:0005759;mitochondrial matrix;3.80529056124587e-21!GO:0044257;cellular protein catabolic process;4.18369692232809e-21!GO:0032559;adenyl ribonucleotide binding;4.67358504019012e-21!GO:0005730;nucleolus;5.59249416819348e-21!GO:0022618;protein-RNA complex assembly;6.91854853153664e-21!GO:0030554;adenyl nucleotide binding;1.39068311717311e-20!GO:0065004;protein-DNA complex assembly;1.61916260364598e-20!GO:0043285;biopolymer catabolic process;1.92040070463753e-20!GO:0015935;small ribosomal subunit;1.54866085744224e-19!GO:0006333;chromatin assembly or disassembly;1.98028989528721e-19!GO:0044248;cellular catabolic process;2.93218258670134e-19!GO:0015934;large ribosomal subunit;5.28983721503207e-19!GO:0000785;chromatin;6.67714739977272e-19!GO:0016604;nuclear body;1.02023783141847e-18!GO:0008135;translation factor activity, nucleic acid binding;2.47199118580551e-18!GO:0009057;macromolecule catabolic process;3.24615932049462e-18!GO:0000502;proteasome complex (sensu Eukaryota);6.38730021668377e-18!GO:0006457;protein folding;1.2217615735127e-17!GO:0051186;cofactor metabolic process;1.2217615735127e-17!GO:0008134;transcription factor binding;3.45431160777636e-17!GO:0005746;mitochondrial respiratory chain;7.20832092001622e-17!GO:0030163;protein catabolic process;1.5191162666755e-16!GO:0044453;nuclear membrane part;1.85478292139755e-16!GO:0043412;biopolymer modification;2.53178777819987e-16!GO:0051726;regulation of cell cycle;2.6249261960033e-16!GO:0000074;regulation of progression through cell cycle;3.67303398259281e-16!GO:0004386;helicase activity;4.9619897862512e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;5.37382474179363e-16!GO:0000375;RNA splicing, via transesterification reactions;5.37382474179363e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.37382474179363e-16!GO:0012505;endomembrane system;9.54399486154835e-16!GO:0050657;nucleic acid transport;1.35063414224149e-15!GO:0051236;establishment of RNA localization;1.35063414224149e-15!GO:0050658;RNA transport;1.35063414224149e-15!GO:0006334;nucleosome assembly;1.93700374389288e-15!GO:0016568;chromatin modification;2.33958299957888e-15!GO:0006403;RNA localization;2.40757133430396e-15!GO:0005643;nuclear pore;2.68892332172444e-15!GO:0005635;nuclear envelope;4.10643185227071e-15!GO:0031497;chromatin assembly;4.41023594900131e-15!GO:0000775;chromosome, pericentric region;5.00761637436839e-15!GO:0050136;NADH dehydrogenase (quinone) activity;5.13199686810788e-15!GO:0003954;NADH dehydrogenase activity;5.13199686810788e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.13199686810788e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.25407820657591e-15!GO:0031965;nuclear membrane;6.08819777416402e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.8023618827713e-14!GO:0003743;translation initiation factor activity;2.15186533000639e-14!GO:0016607;nuclear speck;2.38826534804704e-14!GO:0005761;mitochondrial ribosome;2.49158545793577e-14!GO:0000313;organellar ribosome;2.49158545793577e-14!GO:0006605;protein targeting;2.74939143731272e-14!GO:0051082;unfolded protein binding;2.94750554114985e-14!GO:0042254;ribosome biogenesis and assembly;3.1285535298791e-14!GO:0006413;translational initiation;3.17518558454169e-14!GO:0006464;protein modification process;4.06518559675916e-14!GO:0008026;ATP-dependent helicase activity;5.47410179707777e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.23932705201011e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.38652437154378e-13!GO:0042773;ATP synthesis coupled electron transport;1.38652437154378e-13!GO:0051028;mRNA transport;2.57034617136759e-13!GO:0015630;microtubule cytoskeleton;3.59793760924556e-13!GO:0048770;pigment granule;3.89283791839804e-13!GO:0042470;melanosome;3.89283791839804e-13!GO:0030964;NADH dehydrogenase complex (quinone);3.91725843632097e-13!GO:0045271;respiratory chain complex I;3.91725843632097e-13!GO:0005747;mitochondrial respiratory chain complex I;3.91725843632097e-13!GO:0003697;single-stranded DNA binding;5.11826003018884e-13!GO:0005819;spindle;6.27580134783663e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.97801796499971e-13!GO:0046930;pore complex;1.02460850822906e-12!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.43550602717497e-12!GO:0005813;centrosome;1.50241944897955e-12!GO:0003712;transcription cofactor activity;1.59278408903814e-12!GO:0043687;post-translational protein modification;2.16816929318716e-12!GO:0005815;microtubule organizing center;2.86041667283073e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.94007432250648e-12!GO:0008639;small protein conjugating enzyme activity;4.16815084054803e-12!GO:0006399;tRNA metabolic process;4.58316478848065e-12!GO:0019787;small conjugating protein ligase activity;5.49324836881096e-12!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.39420177891466e-12!GO:0043566;structure-specific DNA binding;6.62342558692294e-12!GO:0006913;nucleocytoplasmic transport;6.91465265121195e-12!GO:0006261;DNA-dependent DNA replication;8.02552046479319e-12!GO:0006732;coenzyme metabolic process;9.39297784273899e-12!GO:0065002;intracellular protein transport across a membrane;1.0091795906059e-11!GO:0008565;protein transporter activity;1.30640914725813e-11!GO:0051169;nuclear transport;1.35740911048666e-11!GO:0004842;ubiquitin-protein ligase activity;1.39838578588922e-11!GO:0016881;acid-amino acid ligase activity;2.9404886182311e-11!GO:0051329;interphase of mitotic cell cycle;2.95716396076156e-11!GO:0051188;cofactor biosynthetic process;3.04714737431525e-11!GO:0009259;ribonucleotide metabolic process;3.7223877796604e-11!GO:0009056;catabolic process;5.26853208043583e-11!GO:0016787;hydrolase activity;5.52276138225163e-11!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.52276138225163e-11!GO:0006163;purine nucleotide metabolic process;5.94682426281983e-11!GO:0006446;regulation of translational initiation;7.31839033449649e-11!GO:0051325;interphase;1.36979656225182e-10!GO:0048193;Golgi vesicle transport;1.71991593600036e-10!GO:0000075;cell cycle checkpoint;1.98636639195616e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.1126643064895e-10!GO:0007059;chromosome segregation;3.76036814685471e-10!GO:0009150;purine ribonucleotide metabolic process;3.89699333410456e-10!GO:0019222;regulation of metabolic process;3.91720110270786e-10!GO:0016072;rRNA metabolic process;4.52331907545192e-10!GO:0032446;protein modification by small protein conjugation;6.15502743917389e-10!GO:0006364;rRNA processing;6.25131801046016e-10!GO:0009260;ribonucleotide biosynthetic process;6.47872455563094e-10!GO:0006164;purine nucleotide biosynthetic process;7.04717010935471e-10!GO:0000786;nucleosome;8.49194539782749e-10!GO:0005794;Golgi apparatus;9.58566802115214e-10!GO:0008094;DNA-dependent ATPase activity;1.09246897247849e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.16640393626241e-09!GO:0007051;spindle organization and biogenesis;1.52620508945944e-09!GO:0006366;transcription from RNA polymerase II promoter;1.89521978711705e-09!GO:0012501;programmed cell death;2.15935963469529e-09!GO:0006915;apoptosis;2.26914861971718e-09!GO:0016567;protein ubiquitination;2.39568395873827e-09!GO:0005657;replication fork;2.76056986141636e-09!GO:0006461;protein complex assembly;3.09784388669657e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.3188748351099e-09!GO:0004812;aminoacyl-tRNA ligase activity;4.3188748351099e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.3188748351099e-09!GO:0009152;purine ribonucleotide biosynthetic process;4.51654743425026e-09!GO:0015986;ATP synthesis coupled proton transport;4.81961521838217e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.81961521838217e-09!GO:0016779;nucleotidyltransferase activity;5.0307443056409e-09!GO:0050794;regulation of cellular process;6.50073069252119e-09!GO:0043038;amino acid activation;7.29236459376381e-09!GO:0006418;tRNA aminoacylation for protein translation;7.29236459376381e-09!GO:0043039;tRNA aminoacylation;7.29236459376381e-09!GO:0030532;small nuclear ribonucleoprotein complex;8.11591454967597e-09!GO:0009199;ribonucleoside triphosphate metabolic process;1.02011998067382e-08!GO:0046034;ATP metabolic process;1.0396843491827e-08!GO:0009141;nucleoside triphosphate metabolic process;1.06496262551917e-08!GO:0019829;cation-transporting ATPase activity;1.10791732513274e-08!GO:0003713;transcription coactivator activity;1.46703943117155e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.53803740535459e-08!GO:0000151;ubiquitin ligase complex;1.66536195127707e-08!GO:0017038;protein import;1.72551565114611e-08!GO:0008219;cell death;1.76102309598517e-08!GO:0016265;death;1.76102309598517e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.11465824364686e-08!GO:0009144;purine nucleoside triphosphate metabolic process;2.11465824364686e-08!GO:0016192;vesicle-mediated transport;2.8485524511384e-08!GO:0016363;nuclear matrix;2.86091735155576e-08!GO:0006310;DNA recombination;3.19149918422937e-08!GO:0006302;double-strand break repair;3.33956915341331e-08!GO:0006754;ATP biosynthetic process;3.60453753007999e-08!GO:0006753;nucleoside phosphate metabolic process;3.60453753007999e-08!GO:0009142;nucleoside triphosphate biosynthetic process;4.95922640087005e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.95922640087005e-08!GO:0005768;endosome;5.31984377322991e-08!GO:0031323;regulation of cellular metabolic process;6.53510268235764e-08!GO:0006950;response to stress;7.5589734506729e-08!GO:0005783;endoplasmic reticulum;7.98053250746668e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.06873128462326e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.06873128462326e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.41282711825392e-07!GO:0009060;aerobic respiration;1.72438373318986e-07!GO:0009108;coenzyme biosynthetic process;1.72438373318986e-07!GO:0000776;kinetochore;1.97100659705388e-07!GO:0009055;electron carrier activity;2.02957241176756e-07!GO:0016740;transferase activity;2.19381106657414e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.35631770396203e-07!GO:0000079;regulation of cyclin-dependent protein kinase activity;2.4037148531008e-07!GO:0006752;group transfer coenzyme metabolic process;2.93315283072887e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.21143817717587e-07!GO:0005839;proteasome core complex (sensu Eukaryota);3.51471988286636e-07!GO:0051427;hormone receptor binding;3.87541991252736e-07!GO:0005667;transcription factor complex;4.41134646972303e-07!GO:0006350;transcription;5.31898003791294e-07!GO:0007005;mitochondrion organization and biogenesis;6.10172435747177e-07!GO:0000245;spliceosome assembly;6.34647525991511e-07!GO:0006401;RNA catabolic process;6.86312641944959e-07!GO:0051246;regulation of protein metabolic process;7.00793619858124e-07!GO:0007088;regulation of mitosis;7.34064132242446e-07!GO:0045333;cellular respiration;7.5410141344586e-07!GO:0004527;exonuclease activity;7.67066626262969e-07!GO:0003899;DNA-directed RNA polymerase activity;9.44660464664186e-07!GO:0003682;chromatin binding;9.58777779786843e-07!GO:0035257;nuclear hormone receptor binding;9.65518131785932e-07!GO:0045259;proton-transporting ATP synthase complex;9.79890682776229e-07!GO:0003724;RNA helicase activity;1.10288836264135e-06!GO:0044432;endoplasmic reticulum part;1.20244098144294e-06!GO:0009117;nucleotide metabolic process;1.3334576947786e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.62840135817378e-06!GO:0051168;nuclear export;1.88028575446953e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.0926086755695e-06!GO:0015399;primary active transmembrane transporter activity;2.0926086755695e-06!GO:0004298;threonine endopeptidase activity;2.16778201835986e-06!GO:0003678;DNA helicase activity;2.53104008894985e-06!GO:0003690;double-stranded DNA binding;2.73865249074849e-06!GO:0003677;DNA binding;2.91832094635766e-06!GO:0006352;transcription initiation;3.09555334127455e-06!GO:0048475;coated membrane;3.523452189101e-06!GO:0030117;membrane coat;3.523452189101e-06!GO:0010468;regulation of gene expression;3.8652396055497e-06!GO:0008654;phospholipid biosynthetic process;4.77227307368549e-06!GO:0004518;nuclease activity;4.79190584255048e-06!GO:0006888;ER to Golgi vesicle-mediated transport;4.98053211385359e-06!GO:0051170;nuclear import;5.58915076979368e-06!GO:0006091;generation of precursor metabolites and energy;7.44073987509883e-06!GO:0006099;tricarboxylic acid cycle;7.79581735972335e-06!GO:0046356;acetyl-CoA catabolic process;7.79581735972335e-06!GO:0000228;nuclear chromosome;9.22108031595872e-06!GO:0006084;acetyl-CoA metabolic process;1.03104677372286e-05!GO:0016563;transcription activator activity;1.06982594261374e-05!GO:0005770;late endosome;1.09466083959352e-05!GO:0043623;cellular protein complex assembly;1.10542664276507e-05!GO:0007093;mitotic cell cycle checkpoint;1.12812669474967e-05!GO:0006606;protein import into nucleus;1.18380626466316e-05!GO:0044440;endosomal part;1.19376528040566e-05!GO:0010008;endosome membrane;1.19376528040566e-05!GO:0008168;methyltransferase activity;1.19893851886939e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.2648214839279e-05!GO:0006402;mRNA catabolic process;1.28372886035652e-05!GO:0000082;G1/S transition of mitotic cell cycle;1.47663699430592e-05!GO:0016741;transferase activity, transferring one-carbon groups;1.5133188684876e-05!GO:0006613;cotranslational protein targeting to membrane;1.59703164482068e-05!GO:0046483;heterocycle metabolic process;1.59777482271625e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.6190502238452e-05!GO:0019899;enzyme binding;1.74776977339689e-05!GO:0000070;mitotic sister chromatid segregation;1.86012715326346e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.93579404804369e-05!GO:0000819;sister chromatid segregation;2.02887158621689e-05!GO:0007017;microtubule-based process;2.03973744444501e-05!GO:0042981;regulation of apoptosis;2.03973744444501e-05!GO:0005876;spindle microtubule;2.54426511302771e-05!GO:0007052;mitotic spindle organization and biogenesis;2.55198766351911e-05!GO:0043067;regulation of programmed cell death;2.7774160235751e-05!GO:0046914;transition metal ion binding;2.90148983144225e-05!GO:0003684;damaged DNA binding;2.98873477020055e-05!GO:0006612;protein targeting to membrane;3.16953796159763e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;3.2051842589714e-05!GO:0050789;regulation of biological process;3.21498586133636e-05!GO:0051187;cofactor catabolic process;3.21729819862061e-05!GO:0045786;negative regulation of progression through cell cycle;3.2261822575782e-05!GO:0006270;DNA replication initiation;3.31895091191881e-05!GO:0032774;RNA biosynthetic process;3.3352537196194e-05!GO:0005789;endoplasmic reticulum membrane;3.37120858699802e-05!GO:0031324;negative regulation of cellular metabolic process;3.46768238139543e-05!GO:0042168;heme metabolic process;3.99271146097041e-05!GO:0000793;condensed chromosome;4.48721282610744e-05!GO:0006783;heme biosynthetic process;4.52784878185599e-05!GO:0008186;RNA-dependent ATPase activity;4.7402398475594e-05!GO:0006351;transcription, DNA-dependent;4.80909823411269e-05!GO:0043492;ATPase activity, coupled to movement of substances;4.92257432114397e-05!GO:0000922;spindle pole;5.07101073806348e-05!GO:0006383;transcription from RNA polymerase III promoter;5.31955502407572e-05!GO:0006778;porphyrin metabolic process;5.71646272571405e-05!GO:0033013;tetrapyrrole metabolic process;5.71646272571405e-05!GO:0032508;DNA duplex unwinding;5.80639378137275e-05!GO:0032392;DNA geometric change;5.80639378137275e-05!GO:0009109;coenzyme catabolic process;6.03609908307784e-05!GO:0005793;ER-Golgi intermediate compartment;6.08927988216514e-05!GO:0051052;regulation of DNA metabolic process;6.09396643157747e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;6.78580993939267e-05!GO:0022890;inorganic cation transmembrane transporter activity;7.12769777078063e-05!GO:0030521;androgen receptor signaling pathway;7.20166703542575e-05!GO:0015992;proton transport;7.22907800248765e-05!GO:0009892;negative regulation of metabolic process;7.28579828914054e-05!GO:0006779;porphyrin biosynthetic process;8.39079412348311e-05!GO:0033014;tetrapyrrole biosynthetic process;8.39079412348311e-05!GO:0005762;mitochondrial large ribosomal subunit;8.77555949471583e-05!GO:0000315;organellar large ribosomal subunit;8.77555949471583e-05!GO:0006268;DNA unwinding during replication;8.85114432859586e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;8.86835563434397e-05!GO:0046474;glycerophospholipid biosynthetic process;8.92349603801262e-05!GO:0003729;mRNA binding;8.92872729829888e-05!GO:0006818;hydrogen transport;8.95254915036753e-05!GO:0016251;general RNA polymerase II transcription factor activity;9.10124368576884e-05!GO:0016310;phosphorylation;9.1455351637085e-05!GO:0031072;heat shock protein binding;9.25742235074178e-05!GO:0043069;negative regulation of programmed cell death;9.39620362347989e-05!GO:0008033;tRNA processing;9.62797080318538e-05!GO:0048523;negative regulation of cellular process;9.90344289043778e-05!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000100792162683592!GO:0030120;vesicle coat;0.00010170195820757!GO:0030662;coated vesicle membrane;0.00010170195820757!GO:0046489;phosphoinositide biosynthetic process;0.000102472961701223!GO:0044431;Golgi apparatus part;0.000102832566777652!GO:0030518;steroid hormone receptor signaling pathway;0.000107178340877111!GO:0006793;phosphorus metabolic process;0.00011505472856717!GO:0006796;phosphate metabolic process;0.00011505472856717!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00012687030429211!GO:0043066;negative regulation of apoptosis;0.000127087941437793!GO:0051087;chaperone binding;0.000141609891822106!GO:0000314;organellar small ribosomal subunit;0.000141609891822106!GO:0005763;mitochondrial small ribosomal subunit;0.000141609891822106!GO:0004004;ATP-dependent RNA helicase activity;0.000143128818218856!GO:0065009;regulation of a molecular function;0.000152922931843449!GO:0016491;oxidoreductase activity;0.000157330260011773!GO:0043021;ribonucleoprotein binding;0.000171721407025396!GO:0043596;nuclear replication fork;0.00017294428951249!GO:0008234;cysteine-type peptidase activity;0.00017562748101505!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00018814299374361!GO:0008270;zinc ion binding;0.000199745243738196!GO:0019783;small conjugating protein-specific protease activity;0.000200287177438692!GO:0006405;RNA export from nucleus;0.00020362854785115!GO:0006916;anti-apoptosis;0.000214723812809486!GO:0003924;GTPase activity;0.000224514640221108!GO:0000059;protein import into nucleus, docking;0.000231797694120181!GO:0006367;transcription initiation from RNA polymerase II promoter;0.000246945826896227!GO:0005773;vacuole;0.000261629870149892!GO:0004843;ubiquitin-specific protease activity;0.000267470118767201!GO:0005874;microtubule;0.000280666181072659!GO:0000725;recombinational repair;0.000294290175387064!GO:0000724;double-strand break repair via homologous recombination;0.000294290175387064!GO:0031570;DNA integrity checkpoint;0.000321925131703715!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000336766835310468!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000363077738874594!GO:0006338;chromatin remodeling;0.000370319151457601!GO:0045449;regulation of transcription;0.000386688085138394!GO:0006650;glycerophospholipid metabolic process;0.000387663291619097!GO:0044454;nuclear chromosome part;0.000404435781248669!GO:0051540;metal cluster binding;0.000422699643684562!GO:0051536;iron-sulfur cluster binding;0.000422699643684562!GO:0044452;nucleolar part;0.000450409851572242!GO:0019867;outer membrane;0.000460210714613653!GO:0015631;tubulin binding;0.000471661239818177!GO:0006082;organic acid metabolic process;0.000471661239818177!GO:0007006;mitochondrial membrane organization and biogenesis;0.000476337195573003!GO:0019752;carboxylic acid metabolic process;0.000488991798753851!GO:0005741;mitochondrial outer membrane;0.000494611671126255!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000503563014501816!GO:0008408;3'-5' exonuclease activity;0.000507500058382151!GO:0046467;membrane lipid biosynthetic process;0.000518370814701376!GO:0009165;nucleotide biosynthetic process;0.000521331995193074!GO:0006289;nucleotide-excision repair;0.000523523610078936!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000542942487515691!GO:0031968;organelle outer membrane;0.000544220438314382!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000562795202407742!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.000594450669743883!GO:0004221;ubiquitin thiolesterase activity;0.000617169516011993!GO:0043681;protein import into mitochondrion;0.000632537068301634!GO:0035258;steroid hormone receptor binding;0.000643724421533681!GO:0043601;nuclear replisome;0.000670605172164919!GO:0030894;replisome;0.000670605172164919!GO:0005769;early endosome;0.000674114155090256!GO:0030384;phosphoinositide metabolic process;0.000705151606863692!GO:0030522;intracellular receptor-mediated signaling pathway;0.000716745836686764!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000722159878824765!GO:0048519;negative regulation of biological process;0.000747367056381497!GO:0006626;protein targeting to mitochondrion;0.000750365277196213!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000755087816155344!GO:0047485;protein N-terminus binding;0.000786186067322678!GO:0006891;intra-Golgi vesicle-mediated transport;0.000835268010668577!GO:0004003;ATP-dependent DNA helicase activity;0.000883981661982775!GO:0006506;GPI anchor biosynthetic process;0.000922033329913355!GO:0019843;rRNA binding;0.000948503310263826!GO:0000049;tRNA binding;0.00097068607879707!GO:0051252;regulation of RNA metabolic process;0.00102120461747811!GO:0005669;transcription factor TFIID complex;0.00105183726004379!GO:0006497;protein amino acid lipidation;0.00112024468560306!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00112442819106965!GO:0006414;translational elongation;0.00116556008991794!GO:0003711;transcription elongation regulator activity;0.00117480169262012!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0011849914400052!GO:0048500;signal recognition particle;0.00125180204304507!GO:0042770;DNA damage response, signal transduction;0.00130105691011797!GO:0050790;regulation of catalytic activity;0.00131001083368912!GO:0005684;U2-dependent spliceosome;0.00132344142109735!GO:0005798;Golgi-associated vesicle;0.00138507261292124!GO:0000323;lytic vacuole;0.00141455262549544!GO:0005764;lysosome;0.00141455262549544!GO:0006611;protein export from nucleus;0.00142970946754832!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00146052137140724!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00146052137140724!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00146052137140724!GO:0016853;isomerase activity;0.00146149062665198!GO:0008312;7S RNA binding;0.00146168253162402!GO:0030880;RNA polymerase complex;0.00147932746180195!GO:0016790;thiolester hydrolase activity;0.00149756136920738!GO:0003714;transcription corepressor activity;0.00150678882013794!GO:0000077;DNA damage checkpoint;0.00163932670029984!GO:0030218;erythrocyte differentiation;0.00165582341568907!GO:0008276;protein methyltransferase activity;0.00168742311551376!GO:0030118;clathrin coat;0.00170728741627105!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00172753986044276!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00172753986044276!GO:0051920;peroxiredoxin activity;0.00182275695439829!GO:0032259;methylation;0.00190754227334001!GO:0000139;Golgi membrane;0.00190806503278991!GO:0007050;cell cycle arrest;0.00192612051408075!GO:0000152;nuclear ubiquitin ligase complex;0.00194419186379952!GO:0008610;lipid biosynthetic process;0.00204402774122047!GO:0050681;androgen receptor binding;0.00205230575865604!GO:0000910;cytokinesis;0.00205230575865604!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00205230575865604!GO:0042158;lipoprotein biosynthetic process;0.00205342581794694!GO:0005758;mitochondrial intermembrane space;0.00206326218793499!GO:0006355;regulation of transcription, DNA-dependent;0.00206918028960566!GO:0016272;prefoldin complex;0.00211092237331727!GO:0048487;beta-tubulin binding;0.00218773761604819!GO:0032200;telomere organization and biogenesis;0.00224198390020061!GO:0000723;telomere maintenance;0.00224198390020061!GO:0044450;microtubule organizing center part;0.0023265897028966!GO:0042393;histone binding;0.00235221693929737!GO:0050811;GABA receptor binding;0.00236102554500901!GO:0005637;nuclear inner membrane;0.00236270123095492!GO:0006839;mitochondrial transport;0.00242030222181777!GO:0046966;thyroid hormone receptor binding;0.00247207308208236!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00253607792411868!GO:0045047;protein targeting to ER;0.00253607792411868!GO:0031902;late endosome membrane;0.00255986971111691!GO:0006118;electron transport;0.00269883602153397!GO:0000287;magnesium ion binding;0.00270852719196713!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00272949172389441!GO:0006284;base-excision repair;0.00277909180968212!GO:0016564;transcription repressor activity;0.00279197837793371!GO:0004674;protein serine/threonine kinase activity;0.00281110689810885!GO:0006730;one-carbon compound metabolic process;0.00283983002079552!GO:0016481;negative regulation of transcription;0.00284654591978148!GO:0030867;rough endoplasmic reticulum membrane;0.00287185454161431!GO:0051053;negative regulation of DNA metabolic process;0.00289801622049166!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0029260591715216!GO:0006417;regulation of translation;0.00293722212306274!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00297203501614425!GO:0000726;non-recombinational repair;0.00301912855094179!GO:0016859;cis-trans isomerase activity;0.0030558377011136!GO:0006505;GPI anchor metabolic process;0.00310060320204918!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00312124977986026!GO:0000428;DNA-directed RNA polymerase complex;0.00312124977986026!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00314659916499877!GO:0051539;4 iron, 4 sulfur cluster binding;0.00315023831655699!GO:0009112;nucleobase metabolic process;0.00331102729414845!GO:0045454;cell redox homeostasis;0.003389728104048!GO:0065007;biological regulation;0.00345287091510179!GO:0031124;mRNA 3'-end processing;0.00346339860647901!GO:0005525;GTP binding;0.00368806307186978!GO:0005885;Arp2/3 protein complex;0.00382422499271831!GO:0006643;membrane lipid metabolic process;0.00406632679177244!GO:0015980;energy derivation by oxidation of organic compounds;0.00429354750074855!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00469306584129958!GO:0015002;heme-copper terminal oxidase activity;0.00469306584129958!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00469306584129958!GO:0004129;cytochrome-c oxidase activity;0.00469306584129958!GO:0032984;macromolecular complex disassembly;0.0048792035940826!GO:0051297;centrosome organization and biogenesis;0.00493439697111158!GO:0031023;microtubule organizing center organization and biogenesis;0.00493439697111158!GO:0006144;purine base metabolic process;0.00526161995984815!GO:0004532;exoribonuclease activity;0.005264925071628!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.005264925071628!GO:0051789;response to protein stimulus;0.00538846516848996!GO:0006986;response to unfolded protein;0.00538846516848996!GO:0000119;mediator complex;0.00560031158665859!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00576827399700889!GO:0008180;signalosome;0.00578621869230811!GO:0005869;dynactin complex;0.00633935782081285!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00633946268170144!GO:0016584;nucleosome positioning;0.00635801475814333!GO:0005680;anaphase-promoting complex;0.00635801475814333!GO:0016408;C-acyltransferase activity;0.00637229063396261!GO:0031123;RNA 3'-end processing;0.0064837172073286!GO:0000080;G1 phase of mitotic cell cycle;0.00662075937371005!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00662075937371005!GO:0031970;organelle envelope lumen;0.00680461296283882!GO:0030663;COPI coated vesicle membrane;0.00680461296283882!GO:0030126;COPI vesicle coat;0.00680461296283882!GO:0045045;secretory pathway;0.00693633917597453!GO:0000096;sulfur amino acid metabolic process;0.00713873244208574!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00714426023292713!GO:0006275;regulation of DNA replication;0.00722940597485821!GO:0005663;DNA replication factor C complex;0.0072322100819163!GO:0006520;amino acid metabolic process;0.00761076661294242!GO:0007004;telomere maintenance via telomerase;0.00764479095890814!GO:0040029;regulation of gene expression, epigenetic;0.00784408081310622!GO:0005774;vacuolar membrane;0.00784408081310622!GO:0006368;RNA elongation from RNA polymerase II promoter;0.00785419644345772!GO:0000781;chromosome, telomeric region;0.00791521680885999!GO:0022406;membrane docking;0.00816055231906419!GO:0048278;vesicle docking;0.00816055231906419!GO:0007098;centrosome cycle;0.00834173905006259!GO:0007034;vacuolar transport;0.0083723925640759!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00838559092725403!GO:0043414;biopolymer methylation;0.00850321942269049!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00853341334230657!GO:0031326;regulation of cellular biosynthetic process;0.00860199577802793!GO:0031988;membrane-bound vesicle;0.00867237352245596!GO:0031577;spindle checkpoint;0.00881131442965436!GO:0003887;DNA-directed DNA polymerase activity;0.00881131442965436!GO:0008139;nuclear localization sequence binding;0.00889405906715664!GO:0016407;acetyltransferase activity;0.00889764304544434!GO:0006376;mRNA splice site selection;0.00918465689112955!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00918465689112955!GO:0043624;cellular protein complex disassembly;0.00943208322563832!GO:0048471;perinuclear region of cytoplasm;0.00943208322563832!GO:0043241;protein complex disassembly;0.00951664364948423!GO:0043488;regulation of mRNA stability;0.00971787341312122!GO:0043487;regulation of RNA stability;0.00971787341312122!GO:0008017;microtubule binding;0.0100511280398989!GO:0006979;response to oxidative stress;0.0102267495509939!GO:0006406;mRNA export from nucleus;0.0105057310895093!GO:0016197;endosome transport;0.0108707292972289!GO:0048250;mitochondrial iron ion transport;0.0109259615082772!GO:0005791;rough endoplasmic reticulum;0.011206570754429!GO:0030119;AP-type membrane coat adaptor complex;0.0112182334996269!GO:0004402;histone acetyltransferase activity;0.0117367880137534!GO:0004468;lysine N-acetyltransferase activity;0.0117367880137534!GO:0000178;exosome (RNase complex);0.0118330189946195!GO:0009124;nucleoside monophosphate biosynthetic process;0.0119161286438904!GO:0009123;nucleoside monophosphate metabolic process;0.0119161286438904!GO:0051318;G1 phase;0.0119161286438904!GO:0005048;signal sequence binding;0.0119161286438904!GO:0050662;coenzyme binding;0.0121230970882094!GO:0006644;phospholipid metabolic process;0.0122035001878998!GO:0007021;tubulin folding;0.0122233870922402!GO:0006301;postreplication repair;0.0123688459761842!GO:0044438;microbody part;0.0126293539444974!GO:0044439;peroxisomal part;0.0126293539444974!GO:0006266;DNA ligation;0.0128440094825755!GO:0008156;negative regulation of DNA replication;0.013662576176378!GO:0005832;chaperonin-containing T-complex;0.0139378337745152!GO:0000118;histone deacetylase complex;0.0140356846563238!GO:0030131;clathrin adaptor complex;0.0141280572090896!GO:0000175;3'-5'-exoribonuclease activity;0.0145517948121942!GO:0015036;disulfide oxidoreductase activity;0.0147089762571791!GO:0000792;heterochromatin;0.0148186161889579!GO:0006914;autophagy;0.0149392279244!GO:0042802;identical protein binding;0.0150131147266556!GO:0016023;cytoplasmic membrane-bound vesicle;0.0150903193246498!GO:0006904;vesicle docking during exocytosis;0.0151669404312938!GO:0044437;vacuolar part;0.0157164701212492!GO:0008637;apoptotic mitochondrial changes;0.0158021231931776!GO:0051338;regulation of transferase activity;0.0159676242593991!GO:0042809;vitamin D receptor binding;0.0160564982151028!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0164162489962041!GO:0003746;translation elongation factor activity;0.0167291935926046!GO:0006378;mRNA polyadenylation;0.0167448285905863!GO:0000209;protein polyubiquitination;0.0167448285905863!GO:0004523;ribonuclease H activity;0.0168886335621154!GO:0004540;ribonuclease activity;0.0171756303283697!GO:0000123;histone acetyltransferase complex;0.0171756303283697!GO:0005765;lysosomal membrane;0.0172942561434329!GO:0031903;microbody membrane;0.0173768347991889!GO:0005778;peroxisomal membrane;0.0173768347991889!GO:0032940;secretion by cell;0.0174433936100927!GO:0008287;protein serine/threonine phosphatase complex;0.017796502167833!GO:0032561;guanyl ribonucleotide binding;0.0179163106804634!GO:0019001;guanyl nucleotide binding;0.0179163106804634!GO:0031901;early endosome membrane;0.0180569744449818!GO:0006303;double-strand break repair via nonhomologous end joining;0.018118626685686!GO:0000731;DNA synthesis during DNA repair;0.018118626685686!GO:0031982;vesicle;0.0184881395936835!GO:0048037;cofactor binding;0.0188568788283095!GO:0022884;macromolecule transmembrane transporter activity;0.0195366671063635!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0195366671063635!GO:0051656;establishment of organelle localization;0.019996853520593!GO:0042054;histone methyltransferase activity;0.019996853520593!GO:0005658;alpha DNA polymerase:primase complex;0.0203241439510817!GO:0030261;chromosome condensation;0.020477004581029!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0205304487597905!GO:0008320;protein transmembrane transporter activity;0.0207790785650352!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.020864100502596!GO:0005521;lamin binding;0.0216887730627666!GO:0004177;aminopeptidase activity;0.0219939163975847!GO:0042157;lipoprotein metabolic process;0.0226076072556058!GO:0030132;clathrin coat of coated pit;0.0226339597532257!GO:0042602;flavin reductase activity;0.0227037558496505!GO:0030503;regulation of cell redox homeostasis;0.0228252585574716!GO:0009161;ribonucleoside monophosphate metabolic process;0.0230955415380596!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0230955415380596!GO:0031647;regulation of protein stability;0.0231043639626872!GO:0008632;apoptotic program;0.0232094049121353!GO:0030496;midbody;0.0235559598443966!GO:0006354;RNA elongation;0.0242976865265809!GO:0016746;transferase activity, transferring acyl groups;0.0243266972400552!GO:0009889;regulation of biosynthetic process;0.0243801552961053!GO:0016605;PML body;0.0244864707586061!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0244968815907773!GO:0000777;condensed chromosome kinetochore;0.0247752182688682!GO:0000779;condensed chromosome, pericentric region;0.0247752182688682!GO:0022411;cellular component disassembly;0.025119811895034!GO:0005777;peroxisome;0.025119811895034!GO:0042579;microbody;0.025119811895034!GO:0009451;RNA modification;0.025343033565568!GO:0007010;cytoskeleton organization and biogenesis;0.0256006788467476!GO:0043022;ribosome binding;0.0260866404803388!GO:0051320;S phase;0.0261420052904193!GO:0005652;nuclear lamina;0.0261420052904193!GO:0033170;DNA-protein loading ATPase activity;0.0261420052904193!GO:0003689;DNA clamp loader activity;0.0261420052904193!GO:0030137;COPI-coated vesicle;0.0266482507379213!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0268701421898248!GO:0005788;endoplasmic reticulum lumen;0.0270176582114932!GO:0007346;regulation of progression through mitotic cell cycle;0.0272222849380883!GO:0006595;polyamine metabolic process;0.0279250476046261!GO:0050000;chromosome localization;0.0280385597927585!GO:0051303;establishment of chromosome localization;0.0280385597927585!GO:0007243;protein kinase cascade;0.0282341187094046!GO:0000930;gamma-tubulin complex;0.0297086641287891!GO:0003702;RNA polymerase II transcription factor activity;0.0297086641287891!GO:0043549;regulation of kinase activity;0.0298991825817702!GO:0016126;sterol biosynthetic process;0.0300946833104011!GO:0030508;thiol-disulfide exchange intermediate activity;0.0301493665030523!GO:0005881;cytoplasmic microtubule;0.0306176721596162!GO:0030145;manganese ion binding;0.0306450040404968!GO:0006519;amino acid and derivative metabolic process;0.0307914603868109!GO:0016279;protein-lysine N-methyltransferase activity;0.0311663709248988!GO:0018024;histone-lysine N-methyltransferase activity;0.0311663709248988!GO:0016278;lysine N-methyltransferase activity;0.0311663709248988!GO:0031252;leading edge;0.0311945053398164!GO:0051881;regulation of mitochondrial membrane potential;0.0311945053398164!GO:0000339;RNA cap binding;0.0319227971133485!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.032171624857076!GO:0003725;double-stranded RNA binding;0.0322299414602928!GO:0004096;catalase activity;0.0322299414602928!GO:0016747;transferase activity, transferring groups other than amino-acyl groups;0.0322299414602928!GO:0045947;negative regulation of translational initiation;0.0325636891354379!GO:0000738;DNA catabolic process, exonucleolytic;0.0325834653707725!GO:0004536;deoxyribonuclease activity;0.0329188012992746!GO:0008415;acyltransferase activity;0.0329706804635736!GO:0045502;dynein binding;0.033810558458326!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0340714928569235!GO:0045039;protein import into mitochondrial inner membrane;0.0340714928569235!GO:0045792;negative regulation of cell size;0.0344718067955231!GO:0031410;cytoplasmic vesicle;0.0349441181810281!GO:0000086;G2/M transition of mitotic cell cycle;0.035123054043356!GO:0042440;pigment metabolic process;0.0352497364495458!GO:0004418;hydroxymethylbilane synthase activity;0.0354478944110988!GO:0008022;protein C-terminus binding;0.0361066362278094!GO:0035267;NuA4 histone acetyltransferase complex;0.0363975027826008!GO:0009116;nucleoside metabolic process;0.0364129020376729!GO:0008536;Ran GTPase binding;0.0365391883649832!GO:0008538;proteasome activator activity;0.0365641053443279!GO:0007076;mitotic chromosome condensation;0.0386288368680942!GO:0000305;response to oxygen radical;0.039072692387884!GO:0004520;endodeoxyribonuclease activity;0.0392143183544254!GO:0006278;RNA-dependent DNA replication;0.0392902224209552!GO:0051321;meiotic cell cycle;0.0392905547665909!GO:0006415;translational termination;0.0394739844614002!GO:0043065;positive regulation of apoptosis;0.0394932193962093!GO:0030174;regulation of DNA replication initiation;0.0422582819614015!GO:0043631;RNA polyadenylation;0.0430336629693578!GO:0031371;ubiquitin conjugating enzyme complex;0.0442360724641329!GO:0004853;uroporphyrinogen decarboxylase activity;0.0446635525047005!GO:0051340;regulation of ligase activity;0.0446744608281231!GO:0000796;condensin complex;0.04499521042121!GO:0000303;response to superoxide;0.0450550611854601!GO:0005833;hemoglobin complex;0.0453404743968907!GO:0043189;H4/H2A histone acetyltransferase complex;0.045471132287806!GO:0033116;ER-Golgi intermediate compartment membrane;0.0459782731443027!GO:0006917;induction of apoptosis;0.0459782731443027!GO:0007040;lysosome organization and biogenesis;0.0476156858245562!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0483215773800737!GO:0005802;trans-Golgi network;0.0484392214943749!GO:0042026;protein refolding;0.0484392214943749!GO:0006607;NLS-bearing substrate import into nucleus;0.0487237326598906!GO:0008629;induction of apoptosis by intracellular signals;0.0492838805959465!GO:0000018;regulation of DNA recombination;0.049436301174223!GO:0033367;protein localization in mast cell secretory granule;0.049436301174223!GO:0033365;protein localization in organelle;0.049436301174223!GO:0033371;T cell secretory granule organization and biogenesis;0.049436301174223!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.049436301174223!GO:0033375;protease localization in T cell secretory granule;0.049436301174223!GO:0042629;mast cell granule;0.049436301174223!GO:0033377;maintenance of protein localization in T cell secretory granule;0.049436301174223!GO:0033364;mast cell secretory granule organization and biogenesis;0.049436301174223!GO:0033380;granzyme B localization in T cell secretory granule;0.049436301174223!GO:0033379;maintenance of protease localization in T cell secretory granule;0.049436301174223!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.049436301174223!GO:0033368;protease localization in mast cell secretory granule;0.049436301174223!GO:0033366;protein localization in secretory granule;0.049436301174223!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.049436301174223!GO:0033374;protein localization in T cell secretory granule;0.049436301174223!GO:0030176;integral to endoplasmic reticulum membrane;0.049497105788342 | |||
|sample_id=11931 | |sample_id=11931 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=Buffy coat | |sample_tissue=Buffy coat | ||
|top_motifs=GATA6:7.52766398529;MYB:3.01825633576;STAT5{A,B}:2.8315552346;E2F1..5:2.53203174142;ALX1:2.44287503003;POU1F1:2.35689227857;NFY{A,B,C}:2.2160572292;YY1:2.17842071122;NR6A1:1.92673603282;PBX1:1.87612297878;CDX1,2,4:1.79024261491;ELK1,4_GABP{A,B1}:1.41648135502;FOX{I1,J2}:1.27894467155;ZNF143:1.20513899662;OCT4_SOX2{dimer}:1.1957857086;FOXN1:1.09522571756;FOX{F1,F2,J1}:1.07628794378;HOXA9_MEIS1:1.0671624936;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.06386624454;RBPJ:1.0275959428;POU2F1..3:1.02146778122;TLX2:0.976398633968;NR1H4:0.957421398195;BPTF:0.932973751669;SREBF1,2:0.894761583762;CUX2:0.86305110326;ZBTB16:0.841222787784;EVI1:0.83695931943;CREB1:0.832467945992;HOX{A5,B5}:0.723664128969;GFI1:0.697093380271;NRF1:0.678733679711;PITX1..3:0.643926140695;SOX{8,9,10}:0.611510346337;NANOG:0.610071064661;POU3F1..4:0.606346265634;PAX8:0.602439278781;HAND1,2:0.596205899361;CRX:0.59361122684;TOPORS:0.556835091969;RFX2..5_RFXANK_RFXAP:0.538840614558;NFE2L2:0.508891273607;NFE2:0.494199223702;TGIF1:0.453473617811;FOXA2:0.44784952692;FOX{D1,D2}:0.446003570473;FOXP3:0.397700642919;PDX1:0.383186797307;PPARG:0.381700700652;STAT1,3:0.380618269851;ATF5_CREB3:0.377603797724;NKX2-1,4:0.311201776071;AIRE:0.300467800792;NKX3-1:0.29210706009;PAX2:0.253472349761;HMX1:0.243911350299;NKX3-2:0.225900635557;IKZF2:0.218394259377;FOXQ1:0.184248352555;BREu{core}:0.151558444324;HBP1_HMGB_SSRP1_UBTF:0.122378708866;SNAI1..3:0.0290747341901;ELF1,2,4:0.0271624825549;AR:0.0239642723878;ZEB1:0.0230460016694;FOXP1:0.0190502251141;TFDP1:0.0170913732735;PAX4:0.0143865532561;ATF4:0.00810890220132;RORA:-0.00506413695402;RUNX1..3:-0.0139397779815;ESRRA:-0.0372992756624;NR5A1,2:-0.0441191091902;LMO2:-0.0467643848081;TBP:-0.112476130125;NFIL3:-0.113301741311;SPIB:-0.119357980207;NANOG{mouse}:-0.120160002255;ZNF148:-0.135489726303;TBX4,5:-0.140080494336;IRF7:-0.146802817322;LHX3,4:-0.162967090994;FOXO1,3,4:-0.182256340486;NFE2L1:-0.194488603939;PAX3,7:-0.203395337775;ZNF423:-0.206257099644;SOX5:-0.210843989226;IRF1,2:-0.211544161892;HNF4A_NR2F1,2:-0.221683578809;PRRX1,2:-0.224341872433;MEF2{A,B,C,D}:-0.24108155923;T:-0.257661137409;SPI1:-0.260020478946;TAL1_TCF{3,4,12}:-0.260807084712;HNF1A:-0.272449286554;ATF2:-0.297473562861;ARID5B:-0.301041879716;MAFB:-0.304942528744;POU6F1:-0.33800094941;MYOD1:-0.374478999356;ZNF238:-0.38730001651;VSX1,2:-0.390925675963;LEF1_TCF7_TCF7L1,2:-0.399922418869;STAT2,4,6:-0.403243456477;NFKB1_REL_RELA:-0.433467679863;CEBPA,B_DDIT3:-0.447700323825;DBP:-0.454551569908;ZNF384:-0.456827307465;BACH2:-0.458435107964;SMAD1..7,9:-0.466223110711;DMAP1_NCOR{1,2}_SMARC:-0.466689477541;RFX1:-0.478408682312;HLF:-0.482810010483;RXRA_VDR{dimer}:-0.496887717528;ALX4:-0.501006011794;MYBL2:-0.544117745152;AHR_ARNT_ARNT2:-0.548053359071;ETS1,2:-0.558570118102;KLF4:-0.565141434005;NR3C1:-0.567021628388;FOXD3:-0.56795117756;FOS_FOS{B,L1}_JUN{B,D}:-0.569645836366;HOX{A6,A7,B6,B7}:-0.595595963253;REST:-0.595923955684;ADNP_IRX_SIX_ZHX:-0.605592902487;HSF1,2:-0.612232677802;NKX2-3_NKX2-5:-0.625926843314;HES1:-0.627469436969;FOSL2:-0.627501402152;FOXM1:-0.634434589867;JUN:-0.645706709087;UFEwm:-0.651005027746;TFAP4:-0.670567979129;PAX6:-0.670725157073;TLX1..3_NFIC{dimer}:-0.673537417872;EN1,2:-0.690152575152;ZIC1..3:-0.691035079378;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.698244829072;NFIX:-0.706858244396;NKX6-1,2:-0.712403392222;TP53:-0.727860640845;NKX2-2,8:-0.791067137033;ZFP161:-0.792188447503;MYFfamily:-0.793479345626;PAX1,9:-0.796782061436;IKZF1:-0.822900104651;HOX{A4,D4}:-0.823906479339;ZBTB6:-0.850908265136;NFATC1..3:-0.879097522561;MTF1:-0.883007436361;RREB1:-0.884080372524;bHLH_family:-0.913410651152;NHLH1,2:-0.916899385393;CDC5L:-0.94335830071;POU5F1:-0.962086025306;SOX17:-0.965463551247;SPZ1:-0.980914587745;ONECUT1,2:-0.985586654908;TEF:-1.01654440605;GCM1,2:-1.03693537444;XBP1:-1.06726772523;GATA4:-1.08746482091;GZF1:-1.1013948399;GTF2I:-1.10492918609;MED-1{core}:-1.11125307119;GLI1..3:-1.12652091172;HMGA1,2:-1.13318740993;PAX5:-1.13642166465;SRF:-1.1741908202;MAZ:-1.17669729099;TEAD1:-1.23383472277;GTF2A1,2:-1.28322794481;PRDM1:-1.29693133067;MZF1:-1.38286034946;SOX2:-1.38790746907;FOXL1:-1.41903809095;TFCP2:-1.65430361361;ATF6:-1.68224111359;ESR1:-1.70422476697;GFI1B:-1.7487717734;HIF1A:-1.75068648769;MTE{core}:-1.80568390578;XCPE1{core}:-1.82835616043;EGR1..3:-1.91882103308;TFAP2B:-1.92628804503;EBF1:-2.03838048374;RXR{A,B,G}:-2.07049639712;PATZ1:-2.09386674101;HIC1:-2.10417236937;EP300:-2.14676286956;SP1:-2.24671254189;TFAP2{A,C}:-2.39227815491 | |top_motifs=GATA6:7.52766398529;MYB:3.01825633576;STAT5{A,B}:2.8315552346;E2F1..5:2.53203174142;ALX1:2.44287503003;POU1F1:2.35689227857;NFY{A,B,C}:2.2160572292;YY1:2.17842071122;NR6A1:1.92673603282;PBX1:1.87612297878;CDX1,2,4:1.79024261491;ELK1,4_GABP{A,B1}:1.41648135502;FOX{I1,J2}:1.27894467155;ZNF143:1.20513899662;OCT4_SOX2{dimer}:1.1957857086;FOXN1:1.09522571756;FOX{F1,F2,J1}:1.07628794378;HOXA9_MEIS1:1.0671624936;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.06386624454;RBPJ:1.0275959428;POU2F1..3:1.02146778122;TLX2:0.976398633968;NR1H4:0.957421398195;BPTF:0.932973751669;SREBF1,2:0.894761583762;CUX2:0.86305110326;ZBTB16:0.841222787784;EVI1:0.83695931943;CREB1:0.832467945992;HOX{A5,B5}:0.723664128969;GFI1:0.697093380271;NRF1:0.678733679711;PITX1..3:0.643926140695;SOX{8,9,10}:0.611510346337;NANOG:0.610071064661;POU3F1..4:0.606346265634;PAX8:0.602439278781;HAND1,2:0.596205899361;CRX:0.59361122684;TOPORS:0.556835091969;RFX2..5_RFXANK_RFXAP:0.538840614558;NFE2L2:0.508891273607;NFE2:0.494199223702;TGIF1:0.453473617811;FOXA2:0.44784952692;FOX{D1,D2}:0.446003570473;FOXP3:0.397700642919;PDX1:0.383186797307;PPARG:0.381700700652;STAT1,3:0.380618269851;ATF5_CREB3:0.377603797724;NKX2-1,4:0.311201776071;AIRE:0.300467800792;NKX3-1:0.29210706009;PAX2:0.253472349761;HMX1:0.243911350299;NKX3-2:0.225900635557;IKZF2:0.218394259377;FOXQ1:0.184248352555;BREu{core}:0.151558444324;HBP1_HMGB_SSRP1_UBTF:0.122378708866;SNAI1..3:0.0290747341901;ELF1,2,4:0.0271624825549;AR:0.0239642723878;ZEB1:0.0230460016694;FOXP1:0.0190502251141;TFDP1:0.0170913732735;PAX4:0.0143865532561;ATF4:0.00810890220132;RORA:-0.00506413695402;RUNX1..3:-0.0139397779815;ESRRA:-0.0372992756624;NR5A1,2:-0.0441191091902;LMO2:-0.0467643848081;TBP:-0.112476130125;NFIL3:-0.113301741311;SPIB:-0.119357980207;NANOG{mouse}:-0.120160002255;ZNF148:-0.135489726303;TBX4,5:-0.140080494336;IRF7:-0.146802817322;LHX3,4:-0.162967090994;FOXO1,3,4:-0.182256340486;NFE2L1:-0.194488603939;PAX3,7:-0.203395337775;ZNF423:-0.206257099644;SOX5:-0.210843989226;IRF1,2:-0.211544161892;HNF4A_NR2F1,2:-0.221683578809;PRRX1,2:-0.224341872433;MEF2{A,B,C,D}:-0.24108155923;T:-0.257661137409;SPI1:-0.260020478946;TAL1_TCF{3,4,12}:-0.260807084712;HNF1A:-0.272449286554;ATF2:-0.297473562861;ARID5B:-0.301041879716;MAFB:-0.304942528744;POU6F1:-0.33800094941;MYOD1:-0.374478999356;ZNF238:-0.38730001651;VSX1,2:-0.390925675963;LEF1_TCF7_TCF7L1,2:-0.399922418869;STAT2,4,6:-0.403243456477;NFKB1_REL_RELA:-0.433467679863;CEBPA,B_DDIT3:-0.447700323825;DBP:-0.454551569908;ZNF384:-0.456827307465;BACH2:-0.458435107964;SMAD1..7,9:-0.466223110711;DMAP1_NCOR{1,2}_SMARC:-0.466689477541;RFX1:-0.478408682312;HLF:-0.482810010483;RXRA_VDR{dimer}:-0.496887717528;ALX4:-0.501006011794;MYBL2:-0.544117745152;AHR_ARNT_ARNT2:-0.548053359071;ETS1,2:-0.558570118102;KLF4:-0.565141434005;NR3C1:-0.567021628388;FOXD3:-0.56795117756;FOS_FOS{B,L1}_JUN{B,D}:-0.569645836366;HOX{A6,A7,B6,B7}:-0.595595963253;REST:-0.595923955684;ADNP_IRX_SIX_ZHX:-0.605592902487;HSF1,2:-0.612232677802;NKX2-3_NKX2-5:-0.625926843314;HES1:-0.627469436969;FOSL2:-0.627501402152;FOXM1:-0.634434589867;JUN:-0.645706709087;UFEwm:-0.651005027746;TFAP4:-0.670567979129;PAX6:-0.670725157073;TLX1..3_NFIC{dimer}:-0.673537417872;EN1,2:-0.690152575152;ZIC1..3:-0.691035079378;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.698244829072;NFIX:-0.706858244396;NKX6-1,2:-0.712403392222;TP53:-0.727860640845;NKX2-2,8:-0.791067137033;ZFP161:-0.792188447503;MYFfamily:-0.793479345626;PAX1,9:-0.796782061436;IKZF1:-0.822900104651;HOX{A4,D4}:-0.823906479339;ZBTB6:-0.850908265136;NFATC1..3:-0.879097522561;MTF1:-0.883007436361;RREB1:-0.884080372524;bHLH_family:-0.913410651152;NHLH1,2:-0.916899385393;CDC5L:-0.94335830071;POU5F1:-0.962086025306;SOX17:-0.965463551247;SPZ1:-0.980914587745;ONECUT1,2:-0.985586654908;TEF:-1.01654440605;GCM1,2:-1.03693537444;XBP1:-1.06726772523;GATA4:-1.08746482091;GZF1:-1.1013948399;GTF2I:-1.10492918609;MED-1{core}:-1.11125307119;GLI1..3:-1.12652091172;HMGA1,2:-1.13318740993;PAX5:-1.13642166465;SRF:-1.1741908202;MAZ:-1.17669729099;TEAD1:-1.23383472277;GTF2A1,2:-1.28322794481;PRDM1:-1.29693133067;MZF1:-1.38286034946;SOX2:-1.38790746907;FOXL1:-1.41903809095;TFCP2:-1.65430361361;ATF6:-1.68224111359;ESR1:-1.70422476697;GFI1B:-1.7487717734;HIF1A:-1.75068648769;MTE{core}:-1.80568390578;XCPE1{core}:-1.82835616043;EGR1..3:-1.91882103308;TFAP2B:-1.92628804503;EBF1:-2.03838048374;RXR{A,B,G}:-2.07049639712;PATZ1:-2.09386674101;HIC1:-2.10417236937;EP300:-2.14676286956;SP1:-2.24671254189;TFAP2{A,C}:-2.39227815491 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11931-125I5;search_select_hide=table117:FF:11931-125I5 | |||
}} | }} | ||
Latest revision as of 18:29, 4 June 2020
| Name: | CD34 cells differentiated to erythrocyte lineage, biol_ rep1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13552 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13552
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13552
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0091 |
| 10 | 10 | 0.0194 |
| 100 | 100 | 0.331 |
| 101 | 101 | 0.064 |
| 102 | 102 | 0.766 |
| 103 | 103 | 0.201 |
| 104 | 104 | 0.719 |
| 105 | 105 | 0.55 |
| 106 | 106 | 0.892 |
| 107 | 107 | 0.147 |
| 108 | 108 | 0.22 |
| 109 | 109 | 0.0378 |
| 11 | 11 | 0.0605 |
| 110 | 110 | 0.209 |
| 111 | 111 | 0.142 |
| 112 | 112 | 0.476 |
| 113 | 113 | 0.913 |
| 114 | 114 | 0.193 |
| 115 | 115 | 0.0339 |
| 116 | 116 | 0.425 |
| 117 | 117 | 0.035 |
| 118 | 118 | 0.436 |
| 119 | 119 | 0.976 |
| 12 | 12 | 0.212 |
| 120 | 120 | 0.431 |
| 121 | 121 | 0.48 |
| 122 | 122 | 0.394 |
| 123 | 123 | 0.0642 |
| 124 | 124 | 0.429 |
| 125 | 125 | 0.222 |
| 126 | 126 | 0.75 |
| 127 | 127 | 0.217 |
| 128 | 128 | 0.981 |
| 129 | 129 | 0.698 |
| 13 | 13 | 0.0219 |
| 130 | 130 | 0.923 |
| 131 | 131 | 0.528 |
| 132 | 132 | 0.0492 |
| 133 | 133 | 0.0402 |
| 134 | 134 | 0.821 |
| 135 | 135 | 0.779 |
| 136 | 136 | 0.408 |
| 137 | 137 | 0.769 |
| 138 | 138 | 0.986 |
| 139 | 139 | 0.908 |
| 14 | 14 | 0.742 |
| 140 | 140 | 0.508 |
| 141 | 141 | 0.115 |
| 142 | 142 | 0.942 |
| 143 | 143 | 0.199 |
| 144 | 144 | 0.355 |
| 145 | 145 | 0.931 |
| 146 | 146 | 0.972 |
| 147 | 147 | 0.115 |
| 148 | 148 | 0.47 |
| 149 | 149 | 0.718 |
| 15 | 15 | 0.045 |
| 150 | 150 | 0.94 |
| 151 | 151 | 0.654 |
| 152 | 152 | 0.0876 |
| 153 | 153 | 0.486 |
| 154 | 154 | 0.565 |
| 155 | 155 | 0.0282 |
| 156 | 156 | 0.219 |
| 157 | 157 | 0.271 |
| 158 | 158 | 0.891 |
| 159 | 159 | 0.0952 |
| 16 | 16 | 0.378 |
| 160 | 160 | 0.741 |
| 161 | 161 | 0.18 |
| 162 | 162 | 0.648 |
| 163 | 163 | 0.199 |
| 164 | 164 | 0.38 |
| 165 | 165 | 0.0861 |
| 166 | 166 | 0.558 |
| 167 | 167 | 0.286 |
| 168 | 168 | 0.862 |
| 169 | 169 | 0.728 |
| 17 | 17 | 0.792 |
| 18 | 18 | 0.555 |
| 19 | 19 | 0.658 |
| 2 | 2 | 0.464 |
| 20 | 20 | 0.169 |
| 21 | 21 | 0.108 |
| 22 | 22 | 0.85 |
| 23 | 23 | 0.256 |
| 24 | 24 | 0.244 |
| 25 | 25 | 0.0956 |
| 26 | 26 | 0.205 |
| 27 | 27 | 0.736 |
| 28 | 28 | 0.415 |
| 29 | 29 | 0.0142 |
| 3 | 3 | 0.232 |
| 30 | 30 | 0.0882 |
| 31 | 31 | 0.998 |
| 32 | 32 | 0.213 |
| 33 | 33 | 0.162 |
| 34 | 34 | 0.525 |
| 35 | 35 | 0.182 |
| 36 | 36 | 0.0257 |
| 37 | 37 | 0.355 |
| 38 | 38 | 0.322 |
| 39 | 39 | 0.637 |
| 4 | 4 | 0.875 |
| 40 | 40 | 0.203 |
| 41 | 41 | 0.446 |
| 42 | 42 | 0.188 |
| 43 | 43 | 0.212 |
| 44 | 44 | 0.603 |
| 45 | 45 | 0.695 |
| 46 | 46 | 0.0953 |
| 47 | 47 | 0.0272 |
| 48 | 48 | 0.164 |
| 49 | 49 | 0.0407 |
| 5 | 5 | 0.245 |
| 50 | 50 | 0.57 |
| 51 | 51 | 0.898 |
| 52 | 52 | 0.608 |
| 53 | 53 | 0.554 |
| 54 | 54 | 0.777 |
| 55 | 55 | 0.96 |
| 56 | 56 | 0.807 |
| 57 | 57 | 0.0323 |
| 58 | 58 | 0.199 |
| 59 | 59 | 0.906 |
| 6 | 6 | 0.44 |
| 60 | 60 | 0.95 |
| 61 | 61 | 0.699 |
| 62 | 62 | 0.0587 |
| 63 | 63 | 0.831 |
| 64 | 64 | 0.352 |
| 65 | 65 | 0.888 |
| 66 | 66 | 0.0134 |
| 67 | 67 | 0.74 |
| 68 | 68 | 0.188 |
| 69 | 69 | 0.218 |
| 7 | 7 | 0.0692 |
| 70 | 70 | 0.989 |
| 71 | 71 | 0.0295 |
| 72 | 72 | 0.767 |
| 73 | 73 | 0.973 |
| 74 | 74 | 0.666 |
| 75 | 75 | 0.00689 |
| 76 | 76 | 0.473 |
| 77 | 77 | 0.961 |
| 78 | 78 | 0.00552 |
| 79 | 79 | 0.173 |
| 8 | 8 | 0.366 |
| 80 | 80 | 0.939 |
| 81 | 81 | 0.656 |
| 82 | 82 | 0.463 |
| 83 | 83 | 0.426 |
| 84 | 84 | 0.544 |
| 85 | 85 | 0.473 |
| 86 | 86 | 0.636 |
| 87 | 87 | 0.453 |
| 88 | 88 | 0.88 |
| 89 | 89 | 0.986 |
| 9 | 9 | 0.893 |
| 90 | 90 | 0.0195 |
| 91 | 91 | 0.613 |
| 92 | 92 | 0.823 |
| 93 | 93 | 0.121 |
| 94 | 94 | 0.393 |
| 95 | 95 | 0.0771 |
| 96 | 96 | 0.0969 |
| 97 | 97 | 0.443 |
| 98 | 98 | 0.0712 |
| 99 | 99 | 0.0837 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13552
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0011169 human reticulocyte sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000764 (erythroid lineage cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000558 (reticulocyte)
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0011169 (human reticulocyte sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
