FF:12196-129B9: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=RNA-Seq@SAMD00013696 | |||
|accession_numbers=CAGE;DRX008066;DRR008938;DRZ000363;DRZ001748;DRZ011713;DRZ013098!RNA-Seq;DRX012349;DRR013797;DRZ002998; | |||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000625 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000625 | ||
Line 7: | Line 9: | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr3:27763807..27763822,-!p1@EOMES!1.90!77.94!EOMES;;chr2:68592406..68592424,+!p1@PLEK!1.89!76.99!PLEK;;chr17:45810594..45810608,+!p1@TBX21!1.86!72.23!TBX21;;chr5:133451294..133451310,+!p2@TCF7!1.80!61.78!TCF7;;chr7:50343634..50343717,+!p2@IKZF1!1.79!60.83!IKZF1;;chr2:192015701..192015743,-!p1@STAT4!1.76!76.99!STAT4;;chr17:37934365..37934387,-!p2@IKZF3!1.70!49.42!IKZF3;;chr3:63953435..63953499,+!p1@ATXN7!1.65!43.72!ATXN7;;chr1:25256756..25256774,-!p1@RUNX3!1.64!78.89!RUNX3;;chr2:231090433..231090469,+!p1@SP140!1.63!41.82!SP140;;chr4:109087445..109087463,-!p1@LEF1!1.61!39.92!LEF1;;chr2:192015750..192015793,-!p2@STAT4!1.60!51.32!STAT4;;chr9:117150254..117150271,-!p1@AKNA!1.57!96.95!AKNA;;chr14:75988771..75988826,+!p1@BATF!1.55!45.62!BATF;;chr2:68592394..68592405,+!p2@PLEK!1.52!32.32!PLEK;;chr5:133450365..133450444,+!p1@TCF7!1.47!126.41!TCF7;;chr19:16435625..16435682,+!p1@KLF2!1.44!811.69!KLF2;;chr4:57522166..57522260,-!p2@HOPX!1.41!28.51!HOPX;;chr7:50343895..50343936,+!p5@IKZF1!1.39!23.76!IKZF1;;chr19:19779619..19779670,+!p1@ZNF101!1.38!62.73!ZNF101;;chr20:50159198..50159299,-!p1@NFATC2!1.36!31.36!NFATC2;;chr7:50344251..50344288,+!p3@IKZF1!1.32!19.96!IKZF1;;chr15:60884706..60884743,-!p1@RORA!1.29!93.14!RORA;;chr3:71355163..71355209,-!p5@FOXP1!1.28!24.71!FOXP1;;chr4:109090075..109090095,-!p2@LEF1!1.28!18.06!LEF1;;chr17:37934204..37934241,-!p3@IKZF3!1.28!18.06!IKZF3;;chr5:133451347..133451358,+!p3@TCF7!1.26!17.11!TCF7;;chr6:106546808..106546833,+!p3@PRDM1!1.25!20.91!PRDM1;;chr3:71542651..71542683,-!p22@FOXP1!1.21!15.21!FOXP1;;chr20:56195474..56195506,-!p1@ZBP1!1.21!15.21!ZBP1;;chr14:75988831..75988847,+!p2@BATF!1.18!14.26!BATF;;chr17:38020392..38020477,-!p1@IKZF3!1.18!14.26!IKZF3;;chr3:18486354..18486377,-!p2@SATB1!1.17!17.11!SATB1;;chrX:106960285..106960299,-!p1@TSC22D3!1.16!353.57!TSC22D3;;chr17:37934280..37934299,-!p6@IKZF3!1.16!13.31!IKZF3;;chr4:57522598..57522664,-!p3@HOPX!1.16!13.31!HOPX;;chr13:74707894..74707947,-!p6@KLF12!1.14!14.26!KLF12;;chr11:128392085..128392232,-!p1@ETS1!1.13!416.30!ETS1;;chr13:41593425..41593480,-!p1@ELF1!1.13!79.84!ELF1;;chr17:38020516..38020544,-!p5@IKZF3!1.13!12.36!IKZF3;;chr11:128392273..128392308,-!p2@ETS1!1.12!52.27!ETS1;;chr2:231090471..231090504,+!p2@SP140!1.09!11.41!SP140;;chr2:97202991..97203043,+!p3@ARID5A!1.09!11.41!ARID5A;;chr14:99738138..99738163,-!p1@BCL11B!1.09!11.41!BCL11B;;chr1:92951607..92951661,-!p1@GFI1!1.09!11.41!GFI1;;chr6:91006518..91006570,-!p1@BACH2!1.07!24.71!BACH2;;chr14:64970670..64970712,-!p3@ZBTB25!1.06!22.81!ZBTB25;;chr20:56195525..56195556,-!p2@ZBP1!1.06!10.45!ZBP1;;chr17:38020557..38020572,-!p4@IKZF3!1.06!10.45!IKZF3;;chr3:71542615..71542644,-!p12@FOXP1!1.06!10.45!FOXP1;;chr3:71542684..71542720,-!p18@FOXP1!1.06!10.45!FOXP1;;chr11:128563948..128564003,+!p1@FLI1!1.05!124.51!FLI1;;chr8:67525443..67525459,-!p2@MYBL1!1.05!15.21!MYBL1;;chr19:38085768..38085821,+!p1@ZNF540!1.04!15.21!ZNF540;;chr2:231090344..231090361,-!p3@SP110!1.02!9.50!SP110;;chr1:26697243..26697258,-!p1@ZNF683!1.02!9.50!ZNF683;;chr9:3525727..3525828,-!p2@RFX3!1.01!23.76!RFX3;;chr19:53289995..53290050,-!p1@ZNF600!1.00!38.02!ZNF600;;chr16:89787937..89787971,+!p1@ZNF276!1.00!23.76!ZNF276;;chr2:178128250..178128293,-!p6@NFE2L2!0.98!21.86!NFE2L2;;chr8:60031619..60031676,-!p1@TOX!0.98!19.01!TOX;;chr14:69262947..69262986,-!p3@ZFP36L1!0.98!10.45!ZFP36L1;;chr21:36421347..36421380,-!p8@RUNX1!0.98!8.55!RUNX1;;chr4:57522674..57522699,-!p5@HOPX!0.98!8.55!HOPX;;chr17:38020481..38020506,-!p7@IKZF3!0.98!8.55!IKZF3;;chr4:81104895..81104920,+!p2@PRDM8!0.96!12.36!PRDM8;;chr10:8096772..8096787,+!p2@GATA3!0.95!9.50!GATA3;;chr21:36421535..36421610,-!p2@RUNX1!0.93!27.56!RUNX1;;chr8:72756023..72756055,-!p6@MSC!0.93!9.50!MSC;;chr7:137620650..137620677,-!p3@CREB3L2!0.93!7.60!CREB3L2;;chr4:109088089..109088101,-!p11@LEF1!0.93!7.60!LEF1;;chr3:71179699..71179744,-!p2@FOXP1!0.91!55.13!FOXP1;;chrX:101186981..101187030,-!p1@ZMAT1!0.90!23.76!ZMAT1;;chr6:91006575..91006602,-!p2@BACH2!0.90!10.45!BACH2;;chr6:45296048..45296082,+!p1@RUNX2!0.88!7.60!RUNX2;;chr4:109089901..109089930,-!p3@LEF1!0.88!6.65!LEF1;;chr1:61542922..61542955,+!p10@NFIA!0.88!6.65!NFIA;;chr16:89789271..89789291,+!p5@ZNF276!0.88!6.65!ZNF276;;chr7:21467674..21467727,+!p1@SP4!0.87!26.61!SP4;;chr8:67525473..67525518,-!p1@MYBL1!0.87!15.21!MYBL1;;chr16:68119324..68119364,+!p1@NFATC3!0.85!28.51!NFATC3;;chr11:128392309..128392350,-!p3@ETS1!0.83!14.26!ETS1;;chr16:3313791..3313834,+!p2@ZNF263!0.83!13.31!ZNF263;;chr18:5295679..5295734,-!p2@ZFP161!0.83!13.31!ZFP161;;chr14:99737850..99737852,-!p3@BCL11B!0.83!5.70!BCL11B;;chr16:89789248..89789270,+!p8@ZNF276!0.83!5.70!ZNF276;;chr6:106546731..106546755,+!p5@PRDM1!0.83!5.70!PRDM1;;chr6:391743..391759,+!p1@IRF4!0.83!5.70!IRF4;;chr7:50344289..50344323,+!p1@IKZF1!0.83!5.70!IKZF1;;chr3:18480217..18480239,-!p3@SATB1!0.83!5.70!SATB1;;chr4:109088940..109089037,-!p4@LEF1!0.83!5.70!LEF1;;chr4:109089573..109089585,-!p8@LEF1!0.83!5.70!LEF1;;chr4:57522513..57522548,-!p4@HOPX!0.83!5.70!HOPX;;chr10:809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| |expression_enrichment_score=chr3:27763807..27763822,-!p1@EOMES!1.90!77.94!EOMES;;chr2:68592406..68592424,+!p1@PLEK!1.89!76.99!PLEK;;chr17:45810594..45810608,+!p1@TBX21!1.86!72.23!TBX21;;chr5:133451294..133451310,+!p2@TCF7!1.80!61.78!TCF7;;chr7:50343634..50343717,+!p2@IKZF1!1.79!60.83!IKZF1;;chr2:192015701..192015743,-!p1@STAT4!1.76!76.99!STAT4;;chr17:37934365..37934387,-!p2@IKZF3!1.70!49.42!IKZF3;;chr3:63953435..63953499,+!p1@ATXN7!1.65!43.72!ATXN7;;chr1:25256756..25256774,-!p1@RUNX3!1.64!78.89!RUNX3;;chr2:231090433..231090469,+!p1@SP140!1.63!41.82!SP140;;chr4:109087445..109087463,-!p1@LEF1!1.61!39.92!LEF1;;chr2:192015750..192015793,-!p2@STAT4!1.60!51.32!STAT4;;chr9:117150254..117150271,-!p1@AKNA!1.57!96.95!AKNA;;chr14:75988771..75988826,+!p1@BATF!1.55!45.62!BATF;;chr2:68592394..68592405,+!p2@PLEK!1.52!32.32!PLEK;;chr5:133450365..133450444,+!p1@TCF7!1.47!126.41!TCF7;;chr19:16435625..16435682,+!p1@KLF2!1.44!811.69!KLF2;;chr4:57522166..57522260,-!p2@HOPX!1.41!28.51!HOPX;;chr7:50343895..50343936,+!p5@IKZF1!1.39!23.76!IKZF1;;chr19:19779619..19779670,+!p1@ZNF101!1.38!62.73!ZNF101;;chr20:50159198..50159299,-!p1@NFATC2!1.36!31.36!NFATC2;;chr7:50344251..50344288,+!p3@IKZF1!1.32!19.96!IKZF1;;chr15:60884706..60884743,-!p1@RORA!1.29!93.14!RORA;;chr3:71355163..71355209,-!p5@FOXP1!1.28!24.71!FOXP1;;chr4:109090075..109090095,-!p2@LEF1!1.28!18.06!LEF1;;chr17:37934204..37934241,-!p3@IKZF3!1.28!18.06!IKZF3;;chr5:133451347..133451358,+!p3@TCF7!1.26!17.11!TCF7;;chr6:106546808..106546833,+!p3@PRDM1!1.25!20.91!PRDM1;;chr3:71542651..71542683,-!p22@FOXP1!1.21!15.21!FOXP1;;chr20:56195474..56195506,-!p1@ZBP1!1.21!15.21!ZBP1;;chr14:75988831..75988847,+!p2@BATF!1.18!14.26!BATF;;chr17:38020392..38020477,-!p1@IKZF3!1.18!14.26!IKZF3;;chr3:18486354..18486377,-!p2@SATB1!1.17!17.11!SATB1;;chrX:106960285..106960299,-!p1@TSC22D3!1.16!353.57!TSC22D3;;chr17:37934280..37934299,-!p6@IKZF3!1.16!13.31!IKZF3;;chr4:57522598..57522664,-!p3@HOPX!1.16!13.31!HOPX;;chr13:74707894..74707947,-!p6@KLF12!1.14!14.26!KLF12;;chr11:128392085..128392232,-!p1@ETS1!1.13!416.30!ETS1;;chr13:41593425..41593480,-!p1@ELF1!1.13!79.84!ELF1;;chr17:38020516..38020544,-!p5@IKZF3!1.13!12.36!IKZF3;;chr11:128392273..128392308,-!p2@ETS1!1.12!52.27!ETS1;;chr2:231090471..231090504,+!p2@SP140!1.09!11.41!SP140;;chr2:97202991..97203043,+!p3@ARID5A!1.09!11.41!ARID5A;;chr14:99738138..99738163,-!p1@BCL11B!1.09!11.41!BCL11B;;chr1:92951607..92951661,-!p1@GFI1!1.09!11.41!GFI1;;chr6:91006518..91006570,-!p1@BACH2!1.07!24.71!BACH2;;chr14:64970670..64970712,-!p3@ZBTB25!1.06!22.81!ZBTB25;;chr20:56195525..56195556,-!p2@ZBP1!1.06!10.45!ZBP1;;chr17:38020557..38020572,-!p4@IKZF3!1.06!10.45!IKZF3;;chr3:71542615..71542644,-!p12@FOXP1!1.06!10.45!FOXP1;;chr3:71542684..71542720,-!p18@FOXP1!1.06!10.45!FOXP1;;chr11:128563948..128564003,+!p1@FLI1!1.05!124.51!FLI1;;chr8:67525443..67525459,-!p2@MYBL1!1.05!15.21!MYBL1;;chr19:38085768..38085821,+!p1@ZNF540!1.04!15.21!ZNF540;;chr2:231090344..231090361,-!p3@SP110!1.02!9.50!SP110;;chr1:26697243..26697258,-!p1@ZNF683!1.02!9.50!ZNF683;;chr9:3525727..3525828,-!p2@RFX3!1.01!23.76!RFX3;;chr19:53289995..53290050,-!p1@ZNF600!1.00!38.02!ZNF600;;chr16:89787937..89787971,+!p1@ZNF276!1.00!23.76!ZNF276;;chr2:178128250..178128293,-!p6@NFE2L2!0.98!21.86!NFE2L2;;chr8:60031619..60031676,-!p1@TOX!0.98!19.01!TOX;;chr14:69262947..69262986,-!p3@ZFP36L1!0.98!10.45!ZFP36L1;;chr21:36421347..36421380,-!p8@RUNX1!0.98!8.55!RUNX1;;chr4:57522674..57522699,-!p5@HOPX!0.98!8.55!HOPX;;chr17:38020481..38020506,-!p7@IKZF3!0.98!8.55!IKZF3;;chr4:81104895..81104920,+!p2@PRDM8!0.96!12.36!PRDM8;;chr10:8096772..8096787,+!p2@GATA3!0.95!9.50!GATA3;;chr21:36421535..36421610,-!p2@RUNX1!0.93!27.56!RUNX1;;chr8:72756023..72756055,-!p6@MSC!0.93!9.50!MSC;;chr7:137620650..137620677,-!p3@CREB3L2!0.93!7.60!CREB3L2;;chr4:109088089..109088101,-!p11@LEF1!0.93!7.60!LEF1;;chr3:71179699..71179744,-!p2@FOXP1!0.91!55.13!FOXP1;;chrX:101186981..101187030,-!p1@ZMAT1!0.90!23.76!ZMAT1;;chr6:91006575..91006602,-!p2@BACH2!0.90!10.45!BACH2;;chr6:45296048..45296082,+!p1@RUNX2!0.88!7.60!RUNX2;;chr4:109089901..109089930,-!p3@LEF1!0.88!6.65!LEF1;;chr1:61542922..61542955,+!p10@NFIA!0.88!6.65!NFIA;;chr16:89789271..89789291,+!p5@ZNF276!0.88!6.65!ZNF276;;chr7:21467674..21467727,+!p1@SP4!0.87!26.61!SP4;;chr8:67525473..67525518,-!p1@MYBL1!0.87!15.21!MYBL1;;chr16:68119324..68119364,+!p1@NFATC3!0.85!28.51!NFATC3;;chr11:128392309..128392350,-!p3@ETS1!0.83!14.26!ETS1;;chr16:3313791..3313834,+!p2@ZNF263!0.83!13.31!ZNF263;;chr18:5295679..5295734,-!p2@ZFP161!0.83!13.31!ZFP161;;chr14:99737850..99737852,-!p3@BCL11B!0.83!5.70!BCL11B;;chr16:89789248..89789270,+!p8@ZNF276!0.83!5.70!ZNF276;;chr6:106546731..106546755,+!p5@PRDM1!0.83!5.70!PRDM1;;chr6:391743..391759,+!p1@IRF4!0.83!5.70!IRF4;;chr7:50344289..50344323,+!p1@IKZF1!0.83!5.70!IKZF1;;chr3:18480217..18480239,-!p3@SATB1!0.83!5.70!SATB1;;chr4:109088940..109089037,-!p4@LEF1!0.83!5.70!LEF1;;chr4:109089573..109089585,-!p8@LEF1!0.83!5.70!LEF1;;chr4:57522513..57522548,-!p4@HOPX!0.83!5.70!HOPX;;chr10:8097591..8097627,+!p7@GATA3!0.83!5.70!GATA3;;chr1:26697189..26697205,-!p2@ZNF683!0.83!5.70!ZNF683;;chr19:58220517..58220583,-!p1@ZNF154!0.82!19.01!ZNF154;;chr19:19779686..19779697,+!p3@ZNF101!0.82!6.65!ZNF101;;chr2:97202480..97202499,+!p1@ARID5A!0.81!59.88!ARID5A;;chr19:52674696..52674758,-!p1@ZNF836!0.81!17.11!ZNF836;;chr8:123793860..123793921,+!p2@ZHX2!0.79!15.21!ZHX2;;chr2:148778973..148779035,+!p3@MBD5!0.79!14.26!MBD5;;chr16:89787973..89788001,+!p3@ZNF276!0.79!10.45!ZNF276;;chr19:19729477..19729542,-!p1@PBX4!0.78!11.41!PBX4;;chr1:45805693..45805718,+!p3@TOE1!0.78!11.41!TOE1;;chr6:15249128..15249177,+!p4@JARID2!0.78!9.50!JARID2;;chr17:46621311..46621332,-!p8@HOXB2!0.78!6.65!HOXB2;;chr4:4291837..4291859,-!p2@LYAR!0.77!17.11!LYAR;;chr19:9546177..9546224,-!p1@ZNF266!0.76!37.07!ZNF266;;chr9:114287433..114287513,+!p1@ZNF483!0.76!13.31!ZNF483;;chr17:36861735..36861755,+!p4@MLLT6!0.76!8.55!MLLT6;;chr3:141121847..141121868,+!p5@ZBTB38!0.76!7.60!ZBTB38;;chr2:242556880..242556899,-!p5@THAP4!0.76!4.75!THAP4;;chr4:109088130..109088163,-!p13@LEF1!0.76!4.75!LEF1;;chr15:31684663..31684717,+!p10@KLF13!0.76!4.75!KLF13;;chr15:67391010..67391046,+!p13@SMAD3!0.76!4.75!SMAD3;;chr20:52226313..52226350,-!p3@ZNF217!0.76!4.75!ZNF217;;chr5:142814241..142814278,-!p12@NR3C1!0.76!4.75!NR3C1;;chr7:50348268..50348366,+!p4@IKZF1!0.76!4.75!IKZF1;;chr9:32550965..32551031,-!p4@TOPORS!0.75!7.60!TOPORS;;chr4:185395191..185395226,-!p4@IRF2!0.75!6.65!IRF2;;chr10:8096631..8096660,+!p1@GATA3!0.75!5.70!GATA3;;chr14:64971288..64971316,-!p2@ZBTB25!0.74!15.21!ZBTB25;;chr3:141820622..141820635,-!p5@TFDP2!0.74!8.55!TFDP2;;chrX:131623932..131623964,-!p7@MBNL3!0.74!6.65!MBNL3;;chr5:131826457..131826514,-!p1@IRF1!0.73!194.84!IRF1;;chr1:10754477..10754517,-!p1@CASZ1!0.73!7.60!CASZ1;;chrX:131623982..131624011,-!p6@MBNL3!0.73!6.65!MBNL3;;chr9:117150303..117150312,-!p3@AKNA!0.73!5.70!AKNA;;chr4:81104865..81104886,+!p6@PRDM8!0.73!4.75!PRDM8;;chr19:49140609..49140643,-!p1@DBP!0.72!26.61!DBP;;chr10:35416142..35416169,+!p3@CREM!0.72!12.36!CREM;;chr19:20748574..20748599,-!p1@ZNF737!0.71!27.56!ZNF737;;chr19:9879350..9879419,-!p2@ZNF846!0.71!9.50!ZNF846;;chr5:43065197..43065244,+!p5@ZNF131!0.71!8.55!ZNF131;;chr19:57183114..57183145,-!p1@ZNF835!0.71!4.75!ZNF835;;chr5:172483347..172483407,+!p1@C5orf41!0.70!34.22!CREBRF;;chr20:44600199..44600219,-!p3@ZNF335!0.70!5.70!ZNF335;;chr9:3525867..3525902,-!p3@RFX3!0.69!15.21!RFX3;;chr8:72756063..72756125,-!p1@MSC!0.69!8.55!MSC;;chr19:49140572..49140594,-!p2@DBP!0.69!6.65!DBP;;chr19:16435523..16435619,+!p2@KLF2!0.69!5.70!KLF2;;chr14:65569101..65569119,-!p3@MAX!0.68!13.31!MAX;;chr19:2841497..2841523,+!p2@ZNF555!0.68!7.60!ZNF555;;chr6:45390269..45390298,+!p5@RUNX2!0.68!6.65!RUNX2;;chr6:106546786..106546802,+!p6@PRDM1!0.68!3.80!PRDM1;;chr7:50343510..50343521,+!p11@IKZF1!0.68!3.80!IKZF1;;chr7:50343800..50343811,+!p8@IKZF1!0.68!3.80!IKZF1;;chr7:92076686..92076700,+!p3@GATAD1!0.68!3.80!GATAD1;;chr8:60031534..60031553,-!p8@TOX!0.68!3.80!TOX;;chr3:18487057..18487105,-!p4@SATB1!0.68!3.80!SATB1;;chr3:63953415..63953430,+!p15@ATXN7!0.68!3.80!ATXN7;;chr3:71353892..71353928,-!p31@FOXP1!0.68!3.80!FOXP1;;chr4:149363475..149363492,-!p2@NR3C2!0.68!3.80!NR3C2;;chr17:38020607..38020621,-!p9@IKZF3!0.68!3.80!IKZF3;;chr19:53290078..53290089,-!p3@ZNF600!0.68!3.80!ZNF600;;chr1:25256175..25256228,-!p5@RUNX3!0.68!3.80!RUNX3;;chr20:57757940..57757966,+!p@chr20:57757940..57757966,+!0.68!3.80!ZNF831;;chr21:36421147..36421193,-!p10@RUNX1!0.68!3.80!RUNX1;;chr4:38665769..38665801,+!p2@KLF3!0.67!38.02!KLF3;;chr19:58144529..58144579,+!p1@ZNF211!0.67!22.81!ZNF211;;chr3:129158854..129158883,-!p3@MBD4!0.67!20.91!MBD4;;chr19:21579908..21579949,+!p1@ZNF493!0.66!24.71!ZNF493;;chr11:65687158..65687216,+!p4@DRAP1!0.66!23.76!DRAP1;;chrX:134477924..134477988,-!p1@ZNF75D!0.66!15.21!ZNF75D;;chr9:2016724..2016752,+!p7@SMARCA2!0.66!7.60!SMARCA2;;chr19:35455110..35455149,-!p1@ZNF792!0.66!7.60!ZNF792;;chr6:42419649..42419673,-!p3@TRERF1!0.66!6.65!TRERF1;;chr7:64838786..64838809,+!p2@ZNF92!0.65!22.81!ZNF92;;chr2:208394817..208394834,+!p3@CREB1!0.65!16.16!CREB1;;chr19:58238958..58239000,-!p1@ZNF671!0.65!16.16!ZNF671;;chr7:99156393..99156433,+!p6@ZNF655!0.65!8.55!ZNF655;;chr13:27998854..27998866,+!p3@GTF3A!0.65!7.60!GTF3A;;chr11:16759983..16760029,-!p2@SOX6!0.65!5.70!SOX6;;chr10:44144292..44144338,-!p1@ZNF32!0.64!25.66!ZNF32;;chrX:106960221..106960236,-!p3@TSC22D3!0.64!10.45!TSC22D3;;chr19:8942962..8942987,-!p1@ZNF558!0.64!10.45!ZNF558;;chr1:211432887..211432903,+!p4@RCOR3!0.64!8.55!RCOR3;;chr7:21467642..21467671,+!p2@SP4!0.64!8.55!SP4;;chr6:15249097..15249115,+!p7@JARID2!0.64!4.75!JARID2;;chr4:140005443..140005527,-!p2@ELF2!0.63!22.81!ELF2;;chr19:44598534..44598559,+!p2@ZNF224!0.63!11.41!ZNF224;;chr3:114819124..114819200,-!p3@ZBTB20!0.63!8.55!ZBTB20;;chr11:13299319..13299424,+!p1@ARNTL!0.62!38.02!ARNTL;;chr7:99097863..99097936,-!p1@ZNF394!0.62!38.02!ZNF394;;chr2:208031542..208031595,-!p2@KLF7!0.62!26.61!KLF7;;chr6:12008986..12009016,+!p3@HIVEP1!0.62!11.41!HIVEP1;;chr19:37341160..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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000625;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988 | |||
|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790 | |ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790 | ||
|fonse_cell_line= | |fonse_cell_line= | ||
Line 38: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation3.CNhs12180.12196-129B9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation3.CNhs12180.12196-129B9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation3.CNhs12180.12196-129B9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation3.CNhs12180.12196-129B9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation3.CNhs12180.12196-129B9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12196-129B9 | |id=FF:12196-129B9 | ||
|is_a=EFO:0002091;;FF:0000030;;FF:0000210 | |is_a=EFO:0002091;;FF:0000030;;FF:0000210 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs12180!RDhi10016 | |||
|library_id_phase_based=2:CNhs12180 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12196 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12196 | |||
|name=CD8+ T Cells (pluriselect), donor090309, donation3 | |name=CD8+ T Cells (pluriselect), donor090309, donation3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 46: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12180,LSID975,release011,COMPLETED | |profile_hcage=CNhs12180,LSID975,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| ||
Line 85: | Line 101: | ||
|top_motifs=PDX1:2.56327722985;T:2.56176922514;CDX1,2,4:2.3142705961;RUNX1..3:2.12226400744;ELF1,2,4:2.07025146032;FOX{F1,F2,J1}:1.74956536812;ETS1,2:1.7395186696;RORA:1.46287866117;FOX{D1,D2}:1.45984356594;LEF1_TCF7_TCF7L1,2:1.43110580424;FOXO1,3,4:1.40821097548;PBX1:1.38167255641;ELK1,4_GABP{A,B1}:1.37287328791;PAX3,7:1.32407479365;STAT1,3:1.29034306249;IRF1,2:1.19165958371;DMAP1_NCOR{1,2}_SMARC:1.18509037193;CRX:1.14025301035;SPI1:1.12860393748;TLX2:1.1253042076;GATA6:1.08784874121;IKZF2:1.03619450069;FOX{I1,J2}:1.00235786107;PAX6:0.983124582261;YY1:0.963659330019;FOXA2:0.941758772045;VSX1,2:0.878199623607;SPIB:0.849135171824;BREu{core}:0.794719498688;BPTF:0.763464706305;NFIX:0.762047513979;CUX2:0.703438085002;NKX2-1,4:0.642806707612;HAND1,2:0.60316195354;NKX6-1,2:0.599255272411;IRF7:0.590636198336;NR1H4:0.569942803301;STAT5{A,B}:0.547254011582;FOXP3:0.505741229109;TGIF1:0.503146448049;ZBTB16:0.480098925449;ATF5_CREB3:0.448850047676;ALX1:0.439244009579;AR:0.428061224776;MYOD1:0.4244159428;HOX{A6,A7,B6,B7}:0.414724084236;SOX5:0.414653552887;NANOG{mouse}:0.413932245363;SNAI1..3:0.406325407405;HES1:0.403568644514;CREB1:0.388295001442;ZEB1:0.388142730372;POU2F1..3:0.36997524666;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.334043441024;RFX2..5_RFXANK_RFXAP:0.284748496326;RBPJ:0.255908237793;PRRX1,2:0.231004084276;FOXN1:0.229157569382;TAL1_TCF{3,4,12}:0.207580950435;NFKB1_REL_RELA:0.184317042673;NKX2-2,8:0.172909444539;NR5A1,2:0.167692409659;NFIL3:0.164572638205;NRF1:0.162351478049;FOXQ1:0.15848824306;SPZ1:0.156349836586;FOXP1:0.129973213698;LMO2:0.106412140102;ADNP_IRX_SIX_ZHX:0.105140824247;MYB:0.0916175784134;HMX1:0.0892676053564;SOX2:0.0857119777551;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0850101050198;TBX4,5:0.0848385423777;ATF2:0.05536923817;OCT4_SOX2{dimer}:0.0330557499616;ZNF148:0.0288004042424;NFATC1..3:0.024348066004;SREBF1,2:-0.00264329907865;NANOG:-0.003453884929;PAX4:-0.00692671284777;PAX2:-0.0293592993889;ZNF143:-0.0961271285361;NR3C1:-0.128140918701;RXRA_VDR{dimer}:-0.137840553615;FOXD3:-0.148965360871;POU1F1:-0.149237374586;ARID5B:-0.156804491642;AHR_ARNT_ARNT2:-0.176311278223;JUN:-0.182454211621;STAT2,4,6:-0.195908104679;HNF4A_NR2F1,2:-0.208852769012;ATF6:-0.225253698432;HNF1A:-0.232291626976;HBP1_HMGB_SSRP1_UBTF:-0.267017584198;EP300:-0.30051699086;ZNF384:-0.332668552921;ATF4:-0.33877668957;CEBPA,B_DDIT3:-0.338990325478;E2F1..5:-0.353021493469;GFI1:-0.354087154661;HOX{A4,D4}:-0.370578529067;FOSL2:-0.387739521478;NFY{A,B,C}:-0.387867501907;HMGA1,2:-0.401703666272;FOXM1:-0.418767142991;GCM1,2:-0.422173346982;ESR1:-0.430723707428;MYFfamily:-0.464187201027;MTF1:-0.477918665105;NHLH1,2:-0.490841476862;NFE2L2:-0.492439922625;EVI1:-0.497830168043;BACH2:-0.499614588563;NKX2-3_NKX2-5:-0.500586130666;NKX3-1:-0.509287984989;RFX1:-0.511130118935;FOS_FOS{B,L1}_JUN{B,D}:-0.543327709548;TFAP4:-0.543475635681;ONECUT1,2:-0.567185708342;DBP:-0.591439915148;NFE2:-0.592631049643;AIRE:-0.611753951678;PAX5:-0.615772626279;ZNF423:-0.637385044798;MEF2{A,B,C,D}:-0.6390111773;HOXA9_MEIS1:-0.65160800806;SMAD1..7,9:-0.655208449944;ZNF238:-0.668176507285;CDC5L:-0.683534983786;HLF:-0.687151912841;REST:-0.699873420876;RREB1:-0.709591202567;GLI1..3:-0.744448533286;TP53:-0.753788160246;TFCP2:-0.757182329056;NFE2L1:-0.760978041958;MAFB:-0.770013327213;MYBL2:-0.771496385784;ALX4:-0.782776284731;EGR1..3:-0.810170431141;SRF:-0.817233632601;NR6A1:-0.888877016709;SOX{8,9,10}:-0.893480982991;POU5F1:-0.894921039289;PITX1..3:-0.912349206416;HOX{A5,B5}:-0.965617769708;MED-1{core}:-0.965834546803;GFI1B:-0.988948867979;ZBTB6:-0.995082397376;LHX3,4:-1.01369645756;SOX17:-1.02189425455;ZFP161:-1.03269023969;PAX8:-1.07423128083;MZF1:-1.08831081488;GATA4:-1.1104846843;HIF1A:-1.1171247415;KLF4:-1.11957693096;EN1,2:-1.14043467721;ESRRA:-1.15414006069;PRDM1:-1.16380315754;HSF1,2:-1.21200811029;PPARG:-1.23191767993;TLX1..3_NFIC{dimer}:-1.23512600796;UFEwm:-1.24850700747;MTE{core}:-1.24944096975;XCPE1{core}:-1.2538494565;FOXL1:-1.26418581422;TBP:-1.26698433949;PATZ1:-1.27523420459;GTF2I:-1.27914152644;TOPORS:-1.28240278202;MAZ:-1.28503767358;TEF:-1.31793992489;POU3F1..4:-1.34892436407;bHLH_family:-1.36056268757;HIC1:-1.37788749964;EBF1:-1.38403359146;GZF1:-1.3936270308;XBP1:-1.41852806017;ZIC1..3:-1.49107352034;TFAP2B:-1.50258524398;TFDP1:-1.5093790433;RXR{A,B,G}:-1.51948755251;NKX3-2:-1.56023799461;TEAD1:-1.61600244421;POU6F1:-1.64776598649;TFAP2{A,C}:-1.85763211938;GTF2A1,2:-1.88940609568;SP1:-2.14797464026;PAX1,9:-2.15575028649;IKZF1:-2.23024146869 | |top_motifs=PDX1:2.56327722985;T:2.56176922514;CDX1,2,4:2.3142705961;RUNX1..3:2.12226400744;ELF1,2,4:2.07025146032;FOX{F1,F2,J1}:1.74956536812;ETS1,2:1.7395186696;RORA:1.46287866117;FOX{D1,D2}:1.45984356594;LEF1_TCF7_TCF7L1,2:1.43110580424;FOXO1,3,4:1.40821097548;PBX1:1.38167255641;ELK1,4_GABP{A,B1}:1.37287328791;PAX3,7:1.32407479365;STAT1,3:1.29034306249;IRF1,2:1.19165958371;DMAP1_NCOR{1,2}_SMARC:1.18509037193;CRX:1.14025301035;SPI1:1.12860393748;TLX2:1.1253042076;GATA6:1.08784874121;IKZF2:1.03619450069;FOX{I1,J2}:1.00235786107;PAX6:0.983124582261;YY1:0.963659330019;FOXA2:0.941758772045;VSX1,2:0.878199623607;SPIB:0.849135171824;BREu{core}:0.794719498688;BPTF:0.763464706305;NFIX:0.762047513979;CUX2:0.703438085002;NKX2-1,4:0.642806707612;HAND1,2:0.60316195354;NKX6-1,2:0.599255272411;IRF7:0.590636198336;NR1H4:0.569942803301;STAT5{A,B}:0.547254011582;FOXP3:0.505741229109;TGIF1:0.503146448049;ZBTB16:0.480098925449;ATF5_CREB3:0.448850047676;ALX1:0.439244009579;AR:0.428061224776;MYOD1:0.4244159428;HOX{A6,A7,B6,B7}:0.414724084236;SOX5:0.414653552887;NANOG{mouse}:0.413932245363;SNAI1..3:0.406325407405;HES1:0.403568644514;CREB1:0.388295001442;ZEB1:0.388142730372;POU2F1..3:0.36997524666;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.334043441024;RFX2..5_RFXANK_RFXAP:0.284748496326;RBPJ:0.255908237793;PRRX1,2:0.231004084276;FOXN1:0.229157569382;TAL1_TCF{3,4,12}:0.207580950435;NFKB1_REL_RELA:0.184317042673;NKX2-2,8:0.172909444539;NR5A1,2:0.167692409659;NFIL3:0.164572638205;NRF1:0.162351478049;FOXQ1:0.15848824306;SPZ1:0.156349836586;FOXP1:0.129973213698;LMO2:0.106412140102;ADNP_IRX_SIX_ZHX:0.105140824247;MYB:0.0916175784134;HMX1:0.0892676053564;SOX2:0.0857119777551;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0850101050198;TBX4,5:0.0848385423777;ATF2:0.05536923817;OCT4_SOX2{dimer}:0.0330557499616;ZNF148:0.0288004042424;NFATC1..3:0.024348066004;SREBF1,2:-0.00264329907865;NANOG:-0.003453884929;PAX4:-0.00692671284777;PAX2:-0.0293592993889;ZNF143:-0.0961271285361;NR3C1:-0.128140918701;RXRA_VDR{dimer}:-0.137840553615;FOXD3:-0.148965360871;POU1F1:-0.149237374586;ARID5B:-0.156804491642;AHR_ARNT_ARNT2:-0.176311278223;JUN:-0.182454211621;STAT2,4,6:-0.195908104679;HNF4A_NR2F1,2:-0.208852769012;ATF6:-0.225253698432;HNF1A:-0.232291626976;HBP1_HMGB_SSRP1_UBTF:-0.267017584198;EP300:-0.30051699086;ZNF384:-0.332668552921;ATF4:-0.33877668957;CEBPA,B_DDIT3:-0.338990325478;E2F1..5:-0.353021493469;GFI1:-0.354087154661;HOX{A4,D4}:-0.370578529067;FOSL2:-0.387739521478;NFY{A,B,C}:-0.387867501907;HMGA1,2:-0.401703666272;FOXM1:-0.418767142991;GCM1,2:-0.422173346982;ESR1:-0.430723707428;MYFfamily:-0.464187201027;MTF1:-0.477918665105;NHLH1,2:-0.490841476862;NFE2L2:-0.492439922625;EVI1:-0.497830168043;BACH2:-0.499614588563;NKX2-3_NKX2-5:-0.500586130666;NKX3-1:-0.509287984989;RFX1:-0.511130118935;FOS_FOS{B,L1}_JUN{B,D}:-0.543327709548;TFAP4:-0.543475635681;ONECUT1,2:-0.567185708342;DBP:-0.591439915148;NFE2:-0.592631049643;AIRE:-0.611753951678;PAX5:-0.615772626279;ZNF423:-0.637385044798;MEF2{A,B,C,D}:-0.6390111773;HOXA9_MEIS1:-0.65160800806;SMAD1..7,9:-0.655208449944;ZNF238:-0.668176507285;CDC5L:-0.683534983786;HLF:-0.687151912841;REST:-0.699873420876;RREB1:-0.709591202567;GLI1..3:-0.744448533286;TP53:-0.753788160246;TFCP2:-0.757182329056;NFE2L1:-0.760978041958;MAFB:-0.770013327213;MYBL2:-0.771496385784;ALX4:-0.782776284731;EGR1..3:-0.810170431141;SRF:-0.817233632601;NR6A1:-0.888877016709;SOX{8,9,10}:-0.893480982991;POU5F1:-0.894921039289;PITX1..3:-0.912349206416;HOX{A5,B5}:-0.965617769708;MED-1{core}:-0.965834546803;GFI1B:-0.988948867979;ZBTB6:-0.995082397376;LHX3,4:-1.01369645756;SOX17:-1.02189425455;ZFP161:-1.03269023969;PAX8:-1.07423128083;MZF1:-1.08831081488;GATA4:-1.1104846843;HIF1A:-1.1171247415;KLF4:-1.11957693096;EN1,2:-1.14043467721;ESRRA:-1.15414006069;PRDM1:-1.16380315754;HSF1,2:-1.21200811029;PPARG:-1.23191767993;TLX1..3_NFIC{dimer}:-1.23512600796;UFEwm:-1.24850700747;MTE{core}:-1.24944096975;XCPE1{core}:-1.2538494565;FOXL1:-1.26418581422;TBP:-1.26698433949;PATZ1:-1.27523420459;GTF2I:-1.27914152644;TOPORS:-1.28240278202;MAZ:-1.28503767358;TEF:-1.31793992489;POU3F1..4:-1.34892436407;bHLH_family:-1.36056268757;HIC1:-1.37788749964;EBF1:-1.38403359146;GZF1:-1.3936270308;XBP1:-1.41852806017;ZIC1..3:-1.49107352034;TFAP2B:-1.50258524398;TFDP1:-1.5093790433;RXR{A,B,G}:-1.51948755251;NKX3-2:-1.56023799461;TEAD1:-1.61600244421;POU6F1:-1.64776598649;TFAP2{A,C}:-1.85763211938;GTF2A1,2:-1.88940609568;SP1:-2.14797464026;PAX1,9:-2.15575028649;IKZF1:-2.23024146869 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12196-129B9;search_select_hide=table117:FF:12196-129B9 | |||
}} | }} |
Latest revision as of 18:34, 4 June 2020
Name: | CD8+ T Cells (pluriselect), donor090309, donation3 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs12180,RDhi10016 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12180
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12180
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.151 |
10 | 10 | 0.0191 |
100 | 100 | 0.921 |
101 | 101 | 0.203 |
102 | 102 | 0.732 |
103 | 103 | 0.158 |
104 | 104 | 0.417 |
105 | 105 | 0.114 |
106 | 106 | 0.606 |
107 | 107 | 0.367 |
108 | 108 | 0.785 |
109 | 109 | 0.0594 |
11 | 11 | 0.0556 |
110 | 110 | 0.393 |
111 | 111 | 0.182 |
112 | 112 | 0.231 |
113 | 113 | 0.236 |
114 | 114 | 0.14 |
115 | 115 | 0.186 |
116 | 116 | 0.872 |
117 | 117 | 0.00517 |
118 | 118 | 0.407 |
119 | 119 | 0.434 |
12 | 12 | 0.726 |
120 | 120 | 0.247 |
121 | 121 | 0.745 |
122 | 122 | 0.45 |
123 | 123 | 0.0205 |
124 | 124 | 0.0455 |
125 | 125 | 0.489 |
126 | 126 | 0.379 |
127 | 127 | 0.524 |
128 | 128 | 0.649 |
129 | 129 | 0.118 |
13 | 13 | 0.406 |
130 | 130 | 0.726 |
131 | 131 | 0.762 |
132 | 132 | 0.921 |
133 | 133 | 0.613 |
134 | 134 | 0.732 |
135 | 135 | 0.183 |
136 | 136 | 0.863 |
137 | 137 | 0.269 |
138 | 138 | 0.265 |
139 | 139 | 0.0101 |
14 | 14 | 0.294 |
140 | 140 | 0.0214 |
141 | 141 | 0.417 |
142 | 142 | 0.4 |
143 | 143 | 3.02914e-5 |
144 | 144 | 0.712 |
145 | 145 | 0.357 |
146 | 146 | 0.112 |
147 | 147 | 0.115 |
148 | 148 | 0.124 |
149 | 149 | 0.952 |
15 | 15 | 0.0528 |
150 | 150 | 0.671 |
151 | 151 | 0.341 |
152 | 152 | 0.338 |
153 | 153 | 0.4 |
154 | 154 | 0.943 |
155 | 155 | 0.0243 |
156 | 156 | 0.576 |
157 | 157 | 0.603 |
158 | 158 | 0.295 |
159 | 159 | 0.057 |
16 | 16 | 0.595 |
160 | 160 | 0.31 |
161 | 161 | 0.18 |
162 | 162 | 0.589 |
163 | 163 | 0.776 |
164 | 164 | 0.279 |
165 | 165 | 0.28 |
166 | 166 | 0.546 |
167 | 167 | 0.247 |
168 | 168 | 0.0457 |
169 | 169 | 0.51 |
17 | 17 | 0.588 |
18 | 18 | 0.403 |
19 | 19 | 0.593 |
2 | 2 | 0.623 |
20 | 20 | 0.938 |
21 | 21 | 0.449 |
22 | 22 | 0.909 |
23 | 23 | 0.942 |
24 | 24 | 0.545 |
25 | 25 | 0.0947 |
26 | 26 | 0.352 |
27 | 27 | 0.0664 |
28 | 28 | 0.45 |
29 | 29 | 0.0877 |
3 | 3 | 0.0381 |
30 | 30 | 0.516 |
31 | 31 | 0.717 |
32 | 32 | 0.33 |
33 | 33 | 0.249 |
34 | 34 | 0.862 |
35 | 35 | 0.0426 |
36 | 36 | 0.0113 |
37 | 37 | 0.16 |
38 | 38 | 0.592 |
39 | 39 | 0.583 |
4 | 4 | 0.476 |
40 | 40 | 0.371 |
41 | 41 | 0.17 |
42 | 42 | 0.0429 |
43 | 43 | 0.174 |
44 | 44 | 0.672 |
45 | 45 | 0.998 |
46 | 46 | 0.071 |
47 | 47 | 0.0522 |
48 | 48 | 0.135 |
49 | 49 | 0.0901 |
5 | 5 | 0.127 |
50 | 50 | 0.592 |
51 | 51 | 0.387 |
52 | 52 | 0.423 |
53 | 53 | 0.227 |
54 | 54 | 0.475 |
55 | 55 | 0.326 |
56 | 56 | 0.524 |
57 | 57 | 0.325 |
58 | 58 | 0.0601 |
59 | 59 | 0.299 |
6 | 6 | 1 |
60 | 60 | 0.293 |
61 | 61 | 0.105 |
62 | 62 | 0.0244 |
63 | 63 | 0.543 |
64 | 64 | 0.139 |
65 | 65 | 0.699 |
66 | 66 | 0.617 |
67 | 67 | 0.875 |
68 | 68 | 0.362 |
69 | 69 | 0.957 |
7 | 7 | 0.171 |
70 | 70 | 0.0052 |
71 | 71 | 0.0547 |
72 | 72 | 0.0702 |
73 | 73 | 0.634 |
74 | 74 | 0.429 |
75 | 75 | 0.0329 |
76 | 76 | 0.233 |
77 | 77 | 0.871 |
78 | 78 | 0.126 |
79 | 79 | 0.15 |
8 | 8 | 0.55 |
80 | 80 | 0.00188 |
81 | 81 | 0.269 |
82 | 82 | 0.123 |
83 | 83 | 0.547 |
84 | 84 | 0.563 |
85 | 85 | 0.975 |
86 | 86 | 0.255 |
87 | 87 | 0.734 |
88 | 88 | 0.903 |
89 | 89 | 0.839 |
9 | 9 | 0.514 |
90 | 90 | 0.012 |
91 | 91 | 0.848 |
92 | 92 | 0.291 |
93 | 93 | 0.241 |
94 | 94 | 0.0497 |
95 | 95 | 0.0148 |
96 | 96 | 0.0617 |
97 | 97 | 0.366 |
98 | 98 | 0.0719 |
99 | 99 | 0.279 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12180
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000030 CD8-positive T cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)