FF:12201-129C5: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=RNA-Seq@SAMD00013678 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008069;DRR008941;DRZ000366;DRZ001751;DRZ011716;DRZ013101!RNA-Seq;DRX012350;DRR013798;DRZ002999; | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000625 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000030 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation1.CNhs12182.12201-129C5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation1.CNhs12182.12201-129C5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation1.CNhs12182.12201-129C5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation1.CNhs12182.12201-129C5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation1.CNhs12182.12201-129C5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12201-129C5 | |id=FF:12201-129C5 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000030;;FF:0000210 | ||
|is_obsolete= | |||
|library_id=CNhs12182!RDhi10017 | |||
|library_id_phase_based=2:CNhs12182 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12201 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12201 | |||
|name=CD8+ T Cells (pluriselect), donor090612, donation1 | |name=CD8+ T Cells (pluriselect), donor090612, donation1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12182,LSID975,release011,COMPLETED | |profile_hcage=CNhs12182,LSID975,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=129 | |rna_box=129 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=2.246 | |rna_weight_ug=2.246 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.8728093555318e-216!GO:0043227;membrane-bound organelle;6.6670355322725e-169!GO:0043231;intracellular membrane-bound organelle;1.46815465575149e-168!GO:0043226;organelle;9.17440691462497e-156!GO:0043229;intracellular organelle;4.20128179079532e-155!GO:0005737;cytoplasm;1.5922677798489e-127!GO:0044422;organelle part;3.98111969466092e-102!GO:0044446;intracellular organelle part;1.16061996503993e-100!GO:0044444;cytoplasmic part;2.15787859661227e-92!GO:0032991;macromolecular complex;1.47506220128706e-86!GO:0044237;cellular metabolic process;5.29897026885691e-86!GO:0043170;macromolecule metabolic process;1.01223729165601e-84!GO:0005634;nucleus;4.31376162174821e-82!GO:0044238;primary metabolic process;2.25739982988804e-80!GO:0030529;ribonucleoprotein complex;2.19010717546697e-78!GO:0003723;RNA binding;4.67420361445573e-74!GO:0044428;nuclear part;1.30826809258288e-68!GO:0043233;organelle lumen;3.4725227062664e-61!GO:0031974;membrane-enclosed lumen;3.4725227062664e-61!GO:0043283;biopolymer metabolic process;8.10313385001955e-54!GO:0005515;protein binding;2.08248701571487e-52!GO:0006396;RNA processing;1.69338207027059e-51!GO:0005739;mitochondrion;3.08854255381006e-51!GO:0006412;translation;1.03104111350241e-50!GO:0010467;gene expression;1.25353476661281e-50!GO:0019538;protein metabolic process;9.13026983655218e-48!GO:0044267;cellular protein metabolic process;1.20340270230105e-45!GO:0044260;cellular macromolecule metabolic process;2.85568600093875e-45!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.83999580825789e-44!GO:0005840;ribosome;1.01606450402696e-43!GO:0033036;macromolecule localization;1.72225008075356e-43!GO:0016071;mRNA metabolic process;3.80187541374809e-43!GO:0031981;nuclear lumen;5.87508970382872e-42!GO:0043234;protein complex;5.87508970382872e-42!GO:0015031;protein transport;3.75399350912815e-41!GO:0045184;establishment of protein localization;3.4612511479296e-40!GO:0008104;protein localization;1.1374002648216e-39!GO:0009059;macromolecule biosynthetic process;4.11101507296052e-39!GO:0003735;structural constituent of ribosome;6.65676355977919e-38!GO:0008380;RNA splicing;1.81738032609038e-37!GO:0044429;mitochondrial part;2.25283211396704e-37!GO:0006397;mRNA processing;2.67047480003878e-37!GO:0031090;organelle membrane;1.62501731242606e-36!GO:0031967;organelle envelope;1.10175362316527e-34!GO:0031975;envelope;2.24263633153811e-34!GO:0033279;ribosomal subunit;1.36761380546073e-33!GO:0005829;cytosol;2.72151480713343e-33!GO:0003676;nucleic acid binding;9.54082753631354e-31!GO:0044249;cellular biosynthetic process;2.32265769542197e-30!GO:0009058;biosynthetic process;4.12956533708689e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.57190715755511e-29!GO:0046907;intracellular transport;5.98029653655709e-29!GO:0006886;intracellular protein transport;8.61360584216528e-29!GO:0005681;spliceosome;5.51182714633025e-28!GO:0005654;nucleoplasm;9.20814333469178e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.48662563797307e-26!GO:0065003;macromolecular complex assembly;9.8702777137393e-26!GO:0016043;cellular component organization and biogenesis;5.13799861974427e-25!GO:0016070;RNA metabolic process;5.16741092764623e-25!GO:0006259;DNA metabolic process;1.72152418708281e-24!GO:0044445;cytosolic part;1.08449902945473e-23!GO:0005740;mitochondrial envelope;5.16825174885429e-23!GO:0031966;mitochondrial membrane;1.02789510838941e-22!GO:0019866;organelle inner membrane;2.69693948084961e-22!GO:0000166;nucleotide binding;7.73084113995586e-22!GO:0022607;cellular component assembly;1.71972457349979e-21!GO:0051641;cellular localization;5.00155001440386e-21!GO:0005743;mitochondrial inner membrane;7.27554727123325e-21!GO:0051649;establishment of cellular localization;8.38704522392171e-21!GO:0044451;nucleoplasm part;9.55761365855856e-21!GO:0006512;ubiquitin cycle;3.22181563937208e-20!GO:0012501;programmed cell death;5.72206734335322e-20!GO:0006915;apoptosis;8.89943740495218e-20!GO:0008219;cell death;1.8974746459738e-19!GO:0016265;death;1.8974746459738e-19!GO:0006119;oxidative phosphorylation;1.96690985717557e-19!GO:0022618;protein-RNA complex assembly;2.4600569647694e-19!GO:0044265;cellular macromolecule catabolic process;4.19993512182524e-18!GO:0016874;ligase activity;1.16785382513119e-17!GO:0031980;mitochondrial lumen;1.28226697605705e-17!GO:0005759;mitochondrial matrix;1.28226697605705e-17!GO:0043412;biopolymer modification;2.05694261371844e-17!GO:0006996;organelle organization and biogenesis;2.07271882440109e-17!GO:0015934;large ribosomal subunit;2.75945105595496e-17!GO:0015935;small ribosomal subunit;3.00786688985392e-17!GO:0006605;protein targeting;4.94092110067975e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.06533182581926e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;6.3993592680877e-17!GO:0016462;pyrophosphatase activity;6.92580050760412e-17!GO:0017111;nucleoside-triphosphatase activity;8.95669519966266e-17!GO:0005730;nucleolus;1.69658300852801e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;1.92133539363596e-16!GO:0019941;modification-dependent protein catabolic process;2.53139945669279e-16!GO:0043632;modification-dependent macromolecule catabolic process;2.53139945669279e-16!GO:0016604;nuclear body;2.70535629842293e-16!GO:0044257;cellular protein catabolic process;4.53121207597615e-16!GO:0006511;ubiquitin-dependent protein catabolic process;4.94308377608605e-16!GO:0043285;biopolymer catabolic process;5.54404922999356e-16!GO:0044455;mitochondrial membrane part;5.83359844823026e-16!GO:0032553;ribonucleotide binding;1.4184656657029e-15!GO:0032555;purine ribonucleotide binding;1.4184656657029e-15!GO:0006913;nucleocytoplasmic transport;2.16366610230236e-15!GO:0051169;nuclear transport;3.62230905482414e-15!GO:0008135;translation factor activity, nucleic acid binding;3.66749267727582e-15!GO:0017076;purine nucleotide binding;3.96532375634736e-15!GO:0006464;protein modification process;5.28293832994029e-15!GO:0006457;protein folding;7.51133088409057e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.9194376205508e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;2.02130438231697e-14!GO:0000375;RNA splicing, via transesterification reactions;2.02130438231697e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.02130438231697e-14!GO:0009057;macromolecule catabolic process;3.78276309919443e-14!GO:0043228;non-membrane-bound organelle;3.78276309919443e-14!GO:0043232;intracellular non-membrane-bound organelle;3.78276309919443e-14!GO:0005746;mitochondrial respiratory chain;4.91905430230557e-14!GO:0006974;response to DNA damage stimulus;8.19413341768535e-14!GO:0016887;ATPase activity;8.67755272859962e-14!GO:0042981;regulation of apoptosis;1.0605388075326e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.16565422162125e-13!GO:0043067;regulation of programmed cell death;1.31400829115296e-13!GO:0012505;endomembrane system;1.45649938336793e-13!GO:0042623;ATPase activity, coupled;2.14298412816995e-13!GO:0008134;transcription factor binding;2.22780508254507e-13!GO:0005524;ATP binding;2.65575229632489e-13!GO:0016607;nuclear speck;2.81778102583873e-13!GO:0043687;post-translational protein modification;3.08008204196498e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.45560352022893e-13!GO:0050136;NADH dehydrogenase (quinone) activity;8.76872608843591e-13!GO:0003954;NADH dehydrogenase activity;8.76872608843591e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;8.76872608843591e-13!GO:0032559;adenyl ribonucleotide binding;8.89514060937663e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.42583578561042e-12!GO:0005635;nuclear envelope;1.93487541701423e-12!GO:0030554;adenyl nucleotide binding;3.49917523731519e-12!GO:0006325;establishment and/or maintenance of chromatin architecture;3.69355886308197e-12!GO:0006413;translational initiation;9.21185943244365e-12!GO:0044248;cellular catabolic process;1.02833224617139e-11!GO:0030163;protein catabolic process;1.10394563626298e-11!GO:0006323;DNA packaging;1.41935661106874e-11!GO:0017038;protein import;1.66514333473161e-11!GO:0031965;nuclear membrane;1.72677781350051e-11!GO:0003743;translation initiation factor activity;1.98054756889247e-11!GO:0042775;organelle ATP synthesis coupled electron transport;2.13020958840114e-11!GO:0042773;ATP synthesis coupled electron transport;2.13020958840114e-11!GO:0005761;mitochondrial ribosome;2.13020958840114e-11!GO:0000313;organellar ribosome;2.13020958840114e-11!GO:0048770;pigment granule;2.74051165748875e-11!GO:0042470;melanosome;2.74051165748875e-11!GO:0006281;DNA repair;2.84042734624494e-11!GO:0050794;regulation of cellular process;3.08204685501904e-11!GO:0051276;chromosome organization and biogenesis;3.15469293879947e-11!GO:0006446;regulation of translational initiation;5.34257572344702e-11!GO:0030964;NADH dehydrogenase complex (quinone);5.85519785864624e-11!GO:0045271;respiratory chain complex I;5.85519785864624e-11!GO:0005747;mitochondrial respiratory chain complex I;5.85519785864624e-11!GO:0042254;ribosome biogenesis and assembly;1.24455829632395e-10!GO:0008639;small protein conjugating enzyme activity;1.37556133845238e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.40966702926665e-10!GO:0051082;unfolded protein binding;1.8282933817173e-10!GO:0004386;helicase activity;2.42439616134243e-10!GO:0004842;ubiquitin-protein ligase activity;3.22060255153389e-10!GO:0051186;cofactor metabolic process;4.64707394049783e-10!GO:0048193;Golgi vesicle transport;5.18950250066743e-10!GO:0005794;Golgi apparatus;1.2362070418252e-09!GO:0007049;cell cycle;1.71824449177365e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.36654101285708e-09!GO:0019787;small conjugating protein ligase activity;2.41188637637215e-09!GO:0016568;chromatin modification;2.5371776817078e-09!GO:0008026;ATP-dependent helicase activity;2.63944654055605e-09!GO:0044453;nuclear membrane part;2.64213658596443e-09!GO:0019829;cation-transporting ATPase activity;3.1427177410162e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.68090738570299e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.71724820138008e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.55398618870587e-09!GO:0050657;nucleic acid transport;7.4247994848077e-09!GO:0051236;establishment of RNA localization;7.4247994848077e-09!GO:0050658;RNA transport;7.4247994848077e-09!GO:0006403;RNA localization;8.40290869772924e-09!GO:0016192;vesicle-mediated transport;1.07983644725869e-08!GO:0043566;structure-specific DNA binding;1.16983556324405e-08!GO:0003712;transcription cofactor activity;1.21330986364536e-08!GO:0009719;response to endogenous stimulus;1.46166810661801e-08!GO:0009259;ribonucleotide metabolic process;1.54495520114982e-08!GO:0005643;nuclear pore;1.98963512239676e-08!GO:0005839;proteasome core complex (sensu Eukaryota);2.52879066267049e-08!GO:0007243;protein kinase cascade;2.69221054807835e-08!GO:0006793;phosphorus metabolic process;2.75488014810058e-08!GO:0006796;phosphate metabolic process;2.75488014810058e-08!GO:0006399;tRNA metabolic process;2.99398676235277e-08!GO:0019222;regulation of metabolic process;3.51551064166728e-08!GO:0051170;nuclear import;3.75362322324872e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.52798554544826e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.74310023124019e-08!GO:0006606;protein import into nucleus;5.78235061228137e-08!GO:0016787;hydrolase activity;5.83403364856707e-08!GO:0005768;endosome;6.07987339632249e-08!GO:0015078;hydrogen ion transmembrane transporter activity;6.81351262572535e-08!GO:0009260;ribonucleotide biosynthetic process;7.97276524025104e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.02491068495033e-08!GO:0030532;small nuclear ribonucleoprotein complex;8.53825777954196e-08!GO:0051246;regulation of protein metabolic process;1.02381652751401e-07!GO:0006732;coenzyme metabolic process;1.02990568626586e-07!GO:0009150;purine ribonucleotide metabolic process;1.19426105070816e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.25606406503995e-07!GO:0006163;purine nucleotide metabolic process;1.40205938303813e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.66787903519496e-07!GO:0016881;acid-amino acid ligase activity;1.70853557042079e-07!GO:0016072;rRNA metabolic process;1.70853557042079e-07!GO:0015986;ATP synthesis coupled proton transport;1.70853557042079e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.70853557042079e-07!GO:0004298;threonine endopeptidase activity;1.71186133278635e-07!GO:0006364;rRNA processing;1.88262288263801e-07!GO:0005694;chromosome;1.88262288263801e-07!GO:0051028;mRNA transport;1.92545665706895e-07!GO:0006164;purine nucleotide biosynthetic process;2.09398539650469e-07!GO:0006333;chromatin assembly or disassembly;2.11351485157199e-07!GO:0003697;single-stranded DNA binding;2.27455324977663e-07!GO:0050789;regulation of biological process;2.32050934836367e-07!GO:0051726;regulation of cell cycle;2.3370686895949e-07!GO:0016310;phosphorylation;2.98666789184648e-07!GO:0005783;endoplasmic reticulum;3.1020344610263e-07!GO:0000074;regulation of progression through cell cycle;3.11359903670177e-07!GO:0065002;intracellular protein transport across a membrane;3.1317677898173e-07!GO:0022402;cell cycle process;3.36919535338593e-07!GO:0000245;spliceosome assembly;3.66635302732865e-07!GO:0008565;protein transporter activity;3.7947116818665e-07!GO:0006916;anti-apoptosis;5.08457609883054e-07!GO:0046930;pore complex;5.38826466710089e-07!GO:0016469;proton-transporting two-sector ATPase complex;6.18299345993041e-07!GO:0044432;endoplasmic reticulum part;7.45361200635484e-07!GO:0048523;negative regulation of cellular process;8.00672642960748e-07!GO:0009060;aerobic respiration;8.43399725726924e-07!GO:0009615;response to virus;9.71963439410144e-07!GO:0044427;chromosomal part;9.81409663262841e-07!GO:0000151;ubiquitin ligase complex;1.04130323079427e-06!GO:0006754;ATP biosynthetic process;1.04130323079427e-06!GO:0006753;nucleoside phosphate metabolic process;1.04130323079427e-06!GO:0046034;ATP metabolic process;1.04381401344504e-06!GO:0003713;transcription coactivator activity;1.05655352403663e-06!GO:0031323;regulation of cellular metabolic process;1.12326035500355e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.14855781283948e-06!GO:0043069;negative regulation of programmed cell death;1.23005173182851e-06!GO:0065004;protein-DNA complex assembly;1.25400699043472e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.49455707889754e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.49455707889754e-06!GO:0065009;regulation of a molecular function;1.55340935101625e-06!GO:0043065;positive regulation of apoptosis;1.60126417452833e-06!GO:0009141;nucleoside triphosphate metabolic process;1.61513335616128e-06!GO:0032446;protein modification by small protein conjugation;1.69940678665309e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.69940678665309e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.69940678665309e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.01525257438771e-06!GO:0006917;induction of apoptosis;2.12670181031833e-06!GO:0043066;negative regulation of apoptosis;2.12670181031833e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.19156781284481e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.19156781284481e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.23900828682924e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.23900828682924e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.23900828682924e-06!GO:0043068;positive regulation of programmed cell death;2.35655221502811e-06!GO:0003724;RNA helicase activity;2.45505938655256e-06!GO:0000785;chromatin;2.85891162763682e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.87266781833642e-06!GO:0012502;induction of programmed cell death;3.23256015688478e-06!GO:0016567;protein ubiquitination;3.49061571818534e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.08474128713014e-06!GO:0006417;regulation of translation;4.24322975261991e-06!GO:0045333;cellular respiration;4.45219111065383e-06!GO:0009056;catabolic process;4.4680957102868e-06!GO:0009055;electron carrier activity;4.47187226251698e-06!GO:0051168;nuclear export;4.83188478473492e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.02384219088489e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;5.0503472013206e-06!GO:0015399;primary active transmembrane transporter activity;5.0503472013206e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.3221482979686e-06!GO:0030120;vesicle coat;5.3221482979686e-06!GO:0030662;coated vesicle membrane;5.3221482979686e-06!GO:0006461;protein complex assembly;5.71418521365452e-06!GO:0043038;amino acid activation;6.07785353700691e-06!GO:0006418;tRNA aminoacylation for protein translation;6.07785353700691e-06!GO:0043039;tRNA aminoacylation;6.07785353700691e-06!GO:0045259;proton-transporting ATP synthase complex;6.10644201928669e-06!GO:0005773;vacuole;6.89229670355998e-06!GO:0016740;transferase activity;7.52924322536621e-06!GO:0048475;coated membrane;7.87289280731421e-06!GO:0030117;membrane coat;7.87289280731421e-06!GO:0005789;endoplasmic reticulum membrane;8.37185986385657e-06!GO:0005770;late endosome;9.92379341363766e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.04320316549907e-05!GO:0006401;RNA catabolic process;1.14293423247519e-05!GO:0016563;transcription activator activity;1.16607594413298e-05!GO:0051188;cofactor biosynthetic process;1.35330589576053e-05!GO:0031326;regulation of cellular biosynthetic process;1.46776523983436e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.53651531492081e-05!GO:0006613;cotranslational protein targeting to membrane;1.65924723798086e-05!GO:0043492;ATPase activity, coupled to movement of substances;1.85419616786556e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;2.01934786514573e-05!GO:0016779;nucleotidyltransferase activity;2.03771453947711e-05!GO:0006260;DNA replication;2.09331495917533e-05!GO:0006366;transcription from RNA polymerase II promoter;2.14628277777429e-05!GO:0048519;negative regulation of biological process;2.20061323932586e-05!GO:0007242;intracellular signaling cascade;2.28370195322895e-05!GO:0005813;centrosome;2.31026662643157e-05!GO:0005793;ER-Golgi intermediate compartment;2.47439430921022e-05!GO:0006350;transcription;2.47703236707269e-05!GO:0045786;negative regulation of progression through cell cycle;2.55316507217087e-05!GO:0019899;enzyme binding;2.56577995195399e-05!GO:0008632;apoptotic program;2.66295803591202e-05!GO:0007005;mitochondrion organization and biogenesis;2.66295803591202e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;2.71385541321954e-05!GO:0000323;lytic vacuole;2.95095693616325e-05!GO:0005764;lysosome;2.95095693616325e-05!GO:0010468;regulation of gene expression;3.60038643834803e-05!GO:0001772;immunological synapse;3.63317462837941e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.26104708499513e-05!GO:0008186;RNA-dependent ATPase activity;5.01209232355301e-05!GO:0006099;tricarboxylic acid cycle;5.17035026058925e-05!GO:0046356;acetyl-CoA catabolic process;5.17035026058925e-05!GO:0006084;acetyl-CoA metabolic process;6.24607587654354e-05!GO:0002376;immune system process;6.87048468064426e-05!GO:0005815;microtubule organizing center;8.17511686284347e-05!GO:0065007;biological regulation;8.32151501735289e-05!GO:0009889;regulation of biosynthetic process;8.36936266812058e-05!GO:0031324;negative regulation of cellular metabolic process;8.88675507350837e-05!GO:0016564;transcription repressor activity;9.80652099692982e-05!GO:0044431;Golgi apparatus part;9.81888374653447e-05!GO:0003690;double-stranded DNA binding;0.000101509935752496!GO:0042101;T cell receptor complex;0.000122916997613659!GO:0009108;coenzyme biosynthetic process;0.000123052924612572!GO:0044440;endosomal part;0.000123337581513689!GO:0010008;endosome membrane;0.000123337581513689!GO:0008270;zinc ion binding;0.000124294597355182!GO:0043623;cellular protein complex assembly;0.000124864890022142!GO:0043021;ribonucleoprotein binding;0.000139786669386438!GO:0006402;mRNA catabolic process;0.000139949300607743!GO:0006334;nucleosome assembly;0.000153030759037408!GO:0042110;T cell activation;0.000156458019717877!GO:0004004;ATP-dependent RNA helicase activity;0.00016454019324864!GO:0005525;GTP binding;0.000184261984123767!GO:0006612;protein targeting to membrane;0.000208941246166638!GO:0009117;nucleotide metabolic process;0.000225102046635631!GO:0005885;Arp2/3 protein complex;0.000227102442897427!GO:0005762;mitochondrial large ribosomal subunit;0.000228582033492268!GO:0000315;organellar large ribosomal subunit;0.000228582033492268!GO:0031497;chromatin assembly;0.000245423362390017!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000247978152236639!GO:0008234;cysteine-type peptidase activity;0.000248141169537625!GO:0051187;cofactor catabolic process;0.000265760178418944!GO:0009109;coenzyme catabolic process;0.0002781348824736!GO:0048522;positive regulation of cellular process;0.00027877314068833!GO:0006752;group transfer coenzyme metabolic process;0.000295168808355976!GO:0003729;mRNA binding;0.000349468741548146!GO:0009967;positive regulation of signal transduction;0.000360078326091757!GO:0016363;nuclear matrix;0.000368018358403044!GO:0000278;mitotic cell cycle;0.000410699729540623!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000436846351145202!GO:0060090;molecular adaptor activity;0.000447334623073539!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000454236680981136!GO:0031252;leading edge;0.000478153400533149!GO:0015992;proton transport;0.000513221539920171!GO:0008654;phospholipid biosynthetic process;0.000518421588502638!GO:0006818;hydrogen transport;0.000536028025519832!GO:0003899;DNA-directed RNA polymerase activity;0.00060931160706282!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000708791782494123!GO:0009892;negative regulation of metabolic process;0.000728072635689327!GO:0046489;phosphoinositide biosynthetic process;0.000737365796277292!GO:0006310;DNA recombination;0.000741699450500663!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000761551241198869!GO:0003725;double-stranded RNA binding;0.000773610591110286!GO:0046649;lymphocyte activation;0.000827538704735466!GO:0043681;protein import into mitochondrion;0.000828015828711307!GO:0030384;phosphoinositide metabolic process;0.000906349551295338!GO:0045321;leukocyte activation;0.000921017988801111!GO:0016481;negative regulation of transcription;0.00105541617327569!GO:0050790;regulation of catalytic activity;0.00109892843634422!GO:0006950;response to stress;0.00111423393946163!GO:0022415;viral reproductive process;0.00112689076367473!GO:0005774;vacuolar membrane;0.00124133038007724!GO:0022890;inorganic cation transmembrane transporter activity;0.00124393095026014!GO:0046914;transition metal ion binding;0.0013026681064755!GO:0005798;Golgi-associated vesicle;0.00133804849312006!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00136333028858893!GO:0000139;Golgi membrane;0.00144140365514912!GO:0006607;NLS-bearing substrate import into nucleus;0.0014670565051114!GO:0006611;protein export from nucleus;0.0014873756503565!GO:0006891;intra-Golgi vesicle-mediated transport;0.00151400726299652!GO:0046474;glycerophospholipid biosynthetic process;0.00155765762342943!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0015968104008614!GO:0051252;regulation of RNA metabolic process;0.00167513361886502!GO:0032561;guanyl ribonucleotide binding;0.00168223716754993!GO:0019001;guanyl nucleotide binding;0.00168223716754993!GO:0048518;positive regulation of biological process;0.00172736261617364!GO:0031968;organelle outer membrane;0.00174175062896834!GO:0005741;mitochondrial outer membrane;0.00179677265466487!GO:0032774;RNA biosynthetic process;0.00181900177864891!GO:0006261;DNA-dependent DNA replication;0.00194589905423911!GO:0008033;tRNA processing;0.00200276166480808!GO:0005667;transcription factor complex;0.00200344728131793!GO:0031072;heat shock protein binding;0.00200344728131793!GO:0006351;transcription, DNA-dependent;0.00213610933967414!GO:0000314;organellar small ribosomal subunit;0.00223927760952939!GO:0005763;mitochondrial small ribosomal subunit;0.00223927760952939!GO:0008047;enzyme activator activity;0.00228940345067955!GO:0019867;outer membrane;0.00230069581668004!GO:0045449;regulation of transcription;0.00236332184670434!GO:0051427;hormone receptor binding;0.0025248496982993!GO:0004518;nuclease activity;0.00259650588231955!GO:0031902;late endosome membrane;0.00266314691914995!GO:0044437;vacuolar part;0.002704606386535!GO:0002757;immune response-activating signal transduction;0.00278544150970625!GO:0016251;general RNA polymerase II transcription factor activity;0.00301700390122157!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00311522106880027!GO:0030658;transport vesicle membrane;0.00312052116890621!GO:0007034;vacuolar transport;0.00325078168100173!GO:0005769;early endosome;0.00325078168100173!GO:0003924;GTPase activity;0.00327966529858755!GO:0004527;exonuclease activity;0.00330061762993513!GO:0048471;perinuclear region of cytoplasm;0.00333874609596095!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00347201566704388!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00347201566704388!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00347201566704388!GO:0008168;methyltransferase activity;0.00362703054198184!GO:0032259;methylation;0.00369618693722138!GO:0048500;signal recognition particle;0.0037374745292049!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00376657833049877!GO:0005070;SH3/SH2 adaptor activity;0.00381999995829336!GO:0006383;transcription from RNA polymerase III promoter;0.00385103425102095!GO:0006955;immune response;0.00388919038589303!GO:0006289;nucleotide-excision repair;0.00394106292939523!GO:0004674;protein serine/threonine kinase activity;0.00395121127448095!GO:0042287;MHC protein binding;0.00395798164725364!GO:0005765;lysosomal membrane;0.00429685507940202!GO:0035257;nuclear hormone receptor binding;0.00450592639314062!GO:0051090;regulation of transcription factor activity;0.00451467399292485!GO:0031625;ubiquitin protein ligase binding;0.00453274420575491!GO:0006650;glycerophospholipid metabolic process;0.00453299044514253!GO:0043488;regulation of mRNA stability;0.00453299044514253!GO:0043487;regulation of RNA stability;0.00453299044514253!GO:0016741;transferase activity, transferring one-carbon groups;0.00455076964851536!GO:0006405;RNA export from nucleus;0.00513013620071281!GO:0002764;immune response-regulating signal transduction;0.00517007529402406!GO:0007006;mitochondrial membrane organization and biogenesis;0.00531624682781775!GO:0003678;DNA helicase activity;0.00537512998776705!GO:0051251;positive regulation of lymphocyte activation;0.00537512998776705!GO:0042802;identical protein binding;0.00554071390646181!GO:0051098;regulation of binding;0.00556411638039686!GO:0051092;activation of NF-kappaB transcription factor;0.00572396899615996!GO:0007265;Ras protein signal transduction;0.00590873972077199!GO:0016584;nucleosome positioning;0.00590902784447366!GO:0005684;U2-dependent spliceosome;0.00598122906019836!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00604724162868105!GO:0008624;induction of apoptosis by extracellular signals;0.00605604130736605!GO:0007264;small GTPase mediated signal transduction;0.00623329953648992!GO:0003714;transcription corepressor activity;0.00658116581151503!GO:0043414;biopolymer methylation;0.00670461187668357!GO:0003684;damaged DNA binding;0.00685390003613774!GO:0016197;endosome transport;0.00689389398087537!GO:0030695;GTPase regulator activity;0.00689389398087537!GO:0003746;translation elongation factor activity;0.00690245754970927!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00690245754970927!GO:0015002;heme-copper terminal oxidase activity;0.00690245754970927!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00690245754970927!GO:0004129;cytochrome-c oxidase activity;0.00690245754970927!GO:0015631;tubulin binding;0.0069469185189618!GO:0030660;Golgi-associated vesicle membrane;0.00705251338460811!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00705251338460811!GO:0009165;nucleotide biosynthetic process;0.00731765697072679!GO:0046822;regulation of nucleocytoplasmic transport;0.00731765697072679!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00734720873599396!GO:0045047;protein targeting to ER;0.00734720873599396!GO:0030118;clathrin coat;0.00744184885758634!GO:0006497;protein amino acid lipidation;0.00746971359517388!GO:0051789;response to protein stimulus;0.00751676215700674!GO:0006986;response to unfolded protein;0.00751676215700674!GO:0051087;chaperone binding;0.00751676215700674!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00764800110765006!GO:0006414;translational elongation;0.00775725794355678!GO:0032940;secretion by cell;0.00780935301430758!GO:0000049;tRNA binding;0.00783106581830568!GO:0016859;cis-trans isomerase activity;0.00786764240832219!GO:0051920;peroxiredoxin activity;0.00790125865045624!GO:0006506;GPI anchor biosynthetic process;0.00791144161679709!GO:0008312;7S RNA binding;0.00841584903520639!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00858302631723358!GO:0003711;transcription elongation regulator activity;0.00898806075563736!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00918081522380484!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00918081522380484!GO:0051336;regulation of hydrolase activity;0.00941655715192995!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00970869679934242!GO:0000786;nucleosome;0.010297039216094!GO:0006352;transcription initiation;0.010297039216094!GO:0004197;cysteine-type endopeptidase activity;0.0106969475261753!GO:0044452;nucleolar part;0.010713223676444!GO:0000087;M phase of mitotic cell cycle;0.0107394320317427!GO:0000209;protein polyubiquitination;0.010991743253376!GO:0016853;isomerase activity;0.0111086596306279!GO:0006505;GPI anchor metabolic process;0.0111086596306279!GO:0008097;5S rRNA binding;0.0113145680875482!GO:0019079;viral genome replication;0.0114323190706144!GO:0001775;cell activation;0.0114938752035573!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0116524465346099!GO:0006376;mRNA splice site selection;0.0119535868773482!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0119535868773482!GO:0048468;cell development;0.011985723621269!GO:0047485;protein N-terminus binding;0.0120854972741615!GO:0001819;positive regulation of cytokine production;0.0130665714240032!GO:0046467;membrane lipid biosynthetic process;0.0133713747505073!GO:0009116;nucleoside metabolic process;0.0135147189735517!GO:0048487;beta-tubulin binding;0.013872259213422!GO:0005669;transcription factor TFIID complex;0.0140110791081997!GO:0019783;small conjugating protein-specific protease activity;0.0151224773699938!GO:0046966;thyroid hormone receptor binding;0.015656866831359!GO:0019058;viral infectious cycle;0.0157153574593533!GO:0030137;COPI-coated vesicle;0.0160243807536061!GO:0007041;lysosomal transport;0.0161336355782617!GO:0051539;4 iron, 4 sulfur cluster binding;0.016310432799781!GO:0007067;mitosis;0.0163653104524137!GO:0030663;COPI coated vesicle membrane;0.0164316973869828!GO:0030126;COPI vesicle coat;0.0164316973869828!GO:0050865;regulation of cell activation;0.0164459018362445!GO:0004843;ubiquitin-specific protease activity;0.0165282593310679!GO:0015980;energy derivation by oxidation of organic compounds;0.0165476649760343!GO:0000287;magnesium ion binding;0.0168512100910304!GO:0051249;regulation of lymphocyte activation;0.0170144421578851!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0172493006991785!GO:0018193;peptidyl-amino acid modification;0.0172699140159118!GO:0005521;lamin binding;0.0174376939902548!GO:0022403;cell cycle phase;0.0174612524603751!GO:0043022;ribosome binding;0.0175731765016818!GO:0006839;mitochondrial transport;0.0178005773873675!GO:0005657;replication fork;0.017853812267804!GO:0031124;mRNA 3'-end processing;0.0179050079020325!GO:0051301;cell division;0.0179050079020325!GO:0050863;regulation of T cell activation;0.0179050079020325!GO:0006355;regulation of transcription, DNA-dependent;0.0181856842764572!GO:0006626;protein targeting to mitochondrion;0.0183645447508948!GO:0008408;3'-5' exonuclease activity;0.0185940402030545!GO:0005048;signal sequence binding;0.0187379913697199!GO:0005869;dynactin complex;0.0188659407183993!GO:0045045;secretory pathway;0.0193890688548717!GO:0030258;lipid modification;0.0194134611685401!GO:0007050;cell cycle arrest;0.0195957269876568!GO:0042158;lipoprotein biosynthetic process;0.0197710637721368!GO:0051223;regulation of protein transport;0.0198863784683999!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.020174559136867!GO:0044438;microbody part;0.020174559136867!GO:0044439;peroxisomal part;0.020174559136867!GO:0051540;metal cluster binding;0.0204650459319876!GO:0051536;iron-sulfur cluster binding;0.0204650459319876!GO:0050811;GABA receptor binding;0.0211305286376939!GO:0031982;vesicle;0.021335807609521!GO:0015630;microtubule cytoskeleton;0.0213913111836589!GO:0004532;exoribonuclease activity;0.0220094937729675!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0220094937729675!GO:0050852;T cell receptor signaling pathway;0.0222153333439551!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0224080192308782!GO:0008017;microtubule binding;0.022485646461516!GO:0050851;antigen receptor-mediated signaling pathway;0.0229361237555941!GO:0006284;base-excision repair;0.023799840826624!GO:0031461;cullin-RING ubiquitin ligase complex;0.0238892500011425!GO:0030125;clathrin vesicle coat;0.0241498705448881!GO:0030665;clathrin coated vesicle membrane;0.0241498705448881!GO:0016272;prefoldin complex;0.0241718950363438!GO:0019843;rRNA binding;0.0243020459883291!GO:0005777;peroxisome;0.0244658264452639!GO:0042579;microbody;0.0244658264452639!GO:0043621;protein self-association;0.0247655965743239!GO:0031123;RNA 3'-end processing;0.0250780923022474!GO:0050870;positive regulation of T cell activation;0.0251060506214658!GO:0009607;response to biotic stimulus;0.0255666897289508!GO:0016585;chromatin remodeling complex;0.0258038246088434!GO:0006914;autophagy;0.0258882460284082!GO:0005096;GTPase activator activity;0.0260605598640986!GO:0005083;small GTPase regulator activity;0.026855227221917!GO:0004221;ubiquitin thiolesterase activity;0.026855227221917!GO:0001726;ruffle;0.0268583141274561!GO:0033116;ER-Golgi intermediate compartment membrane;0.0278976461675212!GO:0045892;negative regulation of transcription, DNA-dependent;0.0290104731214437!GO:0005637;nuclear inner membrane;0.0291381192996619!GO:0031988;membrane-bound vesicle;0.0291413877600207!GO:0006338;chromatin remodeling;0.0296150508884207!GO:0030127;COPII vesicle coat;0.0298089959980039!GO:0012507;ER to Golgi transport vesicle membrane;0.0298089959980039!GO:0008139;nuclear localization sequence binding;0.0304195461740841!GO:0000118;histone deacetylase complex;0.0316313440129081!GO:0031903;microbody membrane;0.0318956524473234!GO:0005778;peroxisomal membrane;0.0318956524473234!GO:0000738;DNA catabolic process, exonucleolytic;0.0318956524473234!GO:0032200;telomere organization and biogenesis;0.0318956524473234!GO:0000723;telomere maintenance;0.0318956524473234!GO:0009112;nucleobase metabolic process;0.0321048109097064!GO:0042608;T cell receptor binding;0.0321822284184962!GO:0030867;rough endoplasmic reticulum membrane;0.0321822284184962!GO:0016605;PML body;0.0326688512558712!GO:0043087;regulation of GTPase activity;0.0331356139531859!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0331356139531859!GO:0022411;cellular component disassembly;0.0331394966404363!GO:0003682;chromatin binding;0.0332655162311061!GO:0006904;vesicle docking during exocytosis;0.0334393380887454!GO:0001784;phosphotyrosine binding;0.0335541622949183!GO:0006919;caspase activation;0.0337979660022301!GO:0022406;membrane docking;0.034052627537931!GO:0048278;vesicle docking;0.034052627537931!GO:0000303;response to superoxide;0.034530290944035!GO:0051091;positive regulation of transcription factor activity;0.0349572186678027!GO:0043281;regulation of caspase activity;0.0349572186678027!GO:0008287;protein serine/threonine phosphatase complex;0.035126034053703!GO:0019883;antigen processing and presentation of endogenous antigen;0.0351955540884493!GO:0006302;double-strand break repair;0.0353143487874182!GO:0000059;protein import into nucleus, docking;0.03533868569722!GO:0048002;antigen processing and presentation of peptide antigen;0.0358319965068567!GO:0030119;AP-type membrane coat adaptor complex;0.0358759083043117!GO:0009966;regulation of signal transduction;0.0371933054027044!GO:0003677;DNA binding;0.0374215493728435!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0388741911190476!GO:0045069;regulation of viral genome replication;0.0388741911190476!GO:0000090;mitotic anaphase;0.0389548324022669!GO:0051322;anaphase;0.0389548324022669!GO:0017134;fibroblast growth factor binding;0.0392599666498658!GO:0002440;production of molecular mediator of immune response;0.0392599666498658!GO:0008637;apoptotic mitochondrial changes;0.0392843533024963!GO:0015036;disulfide oxidoreductase activity;0.0393369196255451!GO:0006091;generation of precursor metabolites and energy;0.0396110462842173!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0396822734589043!GO:0010257;NADH dehydrogenase complex assembly;0.0396822734589043!GO:0033108;mitochondrial respiratory chain complex assembly;0.0396822734589043!GO:0002378;immunoglobulin biosynthetic process;0.0402148201704145!GO:0001911;negative regulation of leukocyte mediated cytotoxicity;0.0402148201704145!GO:0001915;negative regulation of T cell mediated cytotoxicity;0.0402148201704145!GO:0005832;chaperonin-containing T-complex;0.0406945326260742!GO:0004576;oligosaccharyl transferase activity;0.0411034894265503!GO:0030131;clathrin adaptor complex;0.0415496634916035!GO:0004722;protein serine/threonine phosphatase activity;0.0416188713847122!GO:0015923;mannosidase activity;0.0417934413022548!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0417934413022548!GO:0008250;oligosaccharyl transferase complex;0.0423727064897367!GO:0016505;apoptotic protease activator activity;0.0427100582780961!GO:0051052;regulation of DNA metabolic process;0.0429620544362228!GO:0046983;protein dimerization activity;0.0431285524953208!GO:0016791;phosphoric monoester hydrolase activity;0.0438057129574118!GO:0016044;membrane organization and biogenesis;0.0452761906132158!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0454126892788553!GO:0040029;regulation of gene expression, epigenetic;0.0460164210496513!GO:0050857;positive regulation of antigen receptor-mediated signaling pathway;0.0461183891271073!GO:0006013;mannose metabolic process;0.0466032401082744!GO:0045058;T cell selection;0.0469153179475593!GO:0000339;RNA cap binding;0.0469153179475593!GO:0045309;protein phosphorylated amino acid binding;0.0469153179475593!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0471889226748095!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0474259723087436!GO:0045454;cell redox homeostasis;0.0482133137317996!GO:0031410;cytoplasmic vesicle;0.0482317241698607!GO:0030176;integral to endoplasmic reticulum membrane;0.0487335782930443!GO:0016311;dephosphorylation;0.0487682724228275!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0493561830045436!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0493561830045436!GO:0043280;positive regulation of caspase activity;0.0494440131767455!GO:0045603;positive regulation of endothelial cell differentiation;0.049700964381411!GO:0004177;aminopeptidase activity;0.0498208681118324 | |||
|sample_id=12201 | |sample_id=12201 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=T:3.07914668181;PDX1:2.28471045781;RUNX1..3:2.22083230066;ELF1,2,4:2.1668742045;ETS1,2:2.06108640306;PAX3,7:1.7416891684;FOX{D1,D2}:1.55144217663;SPI1:1.52022903124;NFIX:1.45505331268;RORA:1.45426751461;CRX:1.39811326496;FOXO1,3,4:1.39777776514;CDX1,2,4:1.35879442314;DMAP1_NCOR{1,2}_SMARC:1.35493372406;IRF1,2:1.28389890854;SPIB:1.22075081672;STAT1,3:1.20387386493;FOX{F1,F2,J1}:1.20011753784;GATA6:1.1503194746;LEF1_TCF7_TCF7L1,2:1.11064224979;BPTF:1.10682743318;TLX2:1.04239118226;PBX1:1.02036079442;HMX1:0.978893556167;TGIF1:0.950451015163;FOXD3:0.93947161944;SPZ1:0.924262085126;IRF7:0.847682536545;RBPJ:0.847195656491;POU1F1:0.833444168785;IKZF2:0.806035912766;NKX2-1,4:0.766478538886;RFX2..5_RFXANK_RFXAP:0.748344765726;PAX6:0.741158415467;RXRA_VDR{dimer}:0.735330048922;NKX6-1,2:0.722006634715;BREu{core}:0.692227356658;MYOD1:0.650060619528;FOXQ1:0.627045560353;ELK1,4_GABP{A,B1}:0.615675162433;FOXN1:0.592270980685;VSX1,2:0.579889181828;YY1:0.553762267858;NFIL3:0.503188260514;NFATC1..3:0.460578801419;ZEB1:0.452412870541;ZBTB16:0.439313982122;ATF5_CREB3:0.396003042475;ADNP_IRX_SIX_ZHX:0.39446739086;SOX5:0.392012686826;FOXA2:0.37759904783;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.373598076363;TBX4,5:0.318308052773;NFKB1_REL_RELA:0.314355343481;NKX2-2,8:0.301075377096;SNAI1..3:0.292474271515;CUX2:0.272387371076;PRRX1,2:0.271424039919;PAX4:0.25582232842;NR1H4:0.248535777123;CEBPA,B_DDIT3:0.221345600462;HES1:0.191055037852;NANOG{mouse}:0.166488734549;PAX2:0.165911422981;FOXP3:0.165332300994;FOX{I1,J2}:0.162338925562;ALX1:0.162104744455;POU5F1:0.15788646019;TAL1_TCF{3,4,12}:0.122369886735;STAT2,4,6:0.113991039475;SOX2:0.103188929664;CREB1:0.0852625586102;LMO2:0.0509632862859;OCT4_SOX2{dimer}:0.0362956179025;AHR_ARNT_ARNT2:0.0308755454602;SREBF1,2:0.0040461758473;ARID5B:0.00135231065989;MYB:-0.0193576424345;ATF2:-0.0209590372004;STAT5{A,B}:-0.0338614889445;NR3C1:-0.0510722992528;FOXP1:-0.0733995604976;MYFfamily:-0.145959289279;NKX2-3_NKX2-5:-0.180042941289;NR5A1,2:-0.190217362724;NANOG:-0.191365027353;HAND1,2:-0.195481372432;SMAD1..7,9:-0.199687961304;EP300:-0.203077118737;HNF4A_NR2F1,2:-0.207236382236;POU2F1..3:-0.210522478279;NRF1:-0.220109284579;PITX1..3:-0.227060015954;HOX{A6,A7,B6,B7}:-0.245586751648;HNF1A:-0.250290616476;ZNF238:-0.250470245323;FOSL2:-0.254187235521;E2F1..5:-0.268404123571;ZNF143:-0.273656882781;ZNF148:-0.28253422647;AR:-0.290415375657;GLI1..3:-0.293208193973;JUN:-0.298395942003;DBP:-0.302347296036;ATF6:-0.318785061463;HLF:-0.329703431321;MTF1:-0.333231399871;NFE2L1:-0.35648280863;GCM1,2:-0.357107656261;ATF4:-0.370251631833;GATA4:-0.378179042179;BACH2:-0.378762932964;MAFB:-0.383028569622;NKX3-1:-0.388138250374;HBP1_HMGB_SSRP1_UBTF:-0.405361503657;ESR1:-0.405901000715;NHLH1,2:-0.435745021565;TFAP4:-0.441333015454;HMGA1,2:-0.466409290433;FOS_FOS{B,L1}_JUN{B,D}:-0.468121966207;NFE2L2:-0.475394147896;GFI1:-0.501590483917;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.521885450681;RFX1:-0.547749317051;SRF:-0.548876825863;NFY{A,B,C}:-0.549042462665;NFE2:-0.550705534725;RREB1:-0.570033347265;ZNF384:-0.611882509358;PAX8:-0.618440268493;TP53:-0.646786362441;MZF1:-0.648834545966;CDC5L:-0.667776574742;AIRE:-0.69130593759;FOXM1:-0.711038771767;MEF2{A,B,C,D}:-0.712200190613;ALX4:-0.728701771532;SOX{8,9,10}:-0.741829076582;REST:-0.747139746921;EN1,2:-0.798631972524;TFCP2:-0.823939544727;HOX{A5,B5}:-0.826753024992;KLF4:-0.846593925363;EBF1:-0.877236734824;LHX3,4:-0.897507493159;ZNF423:-0.901827728325;PRDM1:-0.9128483188;ZBTB6:-0.91755638621;EVI1:-0.926091972398;PAX5:-0.941498364198;HIF1A:-0.949380481646;GFI1B:-0.957512160805;ZFP161:-0.958694373519;EGR1..3:-0.979495858545;MTE{core}:-0.98260245819;MED-1{core}:-0.997416033221;PPARG:-1.03927520546;ONECUT1,2:-1.04995243991;NKX3-2:-1.11445051696;XBP1:-1.12147611008;NR6A1:-1.13182127989;MAZ:-1.13237807482;PATZ1:-1.13891468403;HOX{A4,D4}:-1.14538897784;TLX1..3_NFIC{dimer}:-1.15052367054;HIC1:-1.20401080846;HSF1,2:-1.20650793301;GTF2I:-1.22917040339;TBP:-1.25282547436;FOXL1:-1.26411405364;TOPORS:-1.26706594834;SOX17:-1.26820995039;HOXA9_MEIS1:-1.28879535753;TEF:-1.35417147788;MYBL2:-1.36319773552;GZF1:-1.36978356935;POU6F1:-1.3951193024;ZIC1..3:-1.39840212091;TFAP2B:-1.41501417202;RXR{A,B,G}:-1.41657887095;UFEwm:-1.42819716992;GTF2A1,2:-1.45884318189;bHLH_family:-1.59272839041;TFDP1:-1.60191019792;XCPE1{core}:-1.61911374772;POU3F1..4:-1.62133123343;TEAD1:-1.73919240384;SP1:-1.80790813062;ESRRA:-1.96028045974;TFAP2{A,C}:-2.23555771947;IKZF1:-2.42812314463;PAX1,9:-2.70890168701 | |top_motifs=T:3.07914668181;PDX1:2.28471045781;RUNX1..3:2.22083230066;ELF1,2,4:2.1668742045;ETS1,2:2.06108640306;PAX3,7:1.7416891684;FOX{D1,D2}:1.55144217663;SPI1:1.52022903124;NFIX:1.45505331268;RORA:1.45426751461;CRX:1.39811326496;FOXO1,3,4:1.39777776514;CDX1,2,4:1.35879442314;DMAP1_NCOR{1,2}_SMARC:1.35493372406;IRF1,2:1.28389890854;SPIB:1.22075081672;STAT1,3:1.20387386493;FOX{F1,F2,J1}:1.20011753784;GATA6:1.1503194746;LEF1_TCF7_TCF7L1,2:1.11064224979;BPTF:1.10682743318;TLX2:1.04239118226;PBX1:1.02036079442;HMX1:0.978893556167;TGIF1:0.950451015163;FOXD3:0.93947161944;SPZ1:0.924262085126;IRF7:0.847682536545;RBPJ:0.847195656491;POU1F1:0.833444168785;IKZF2:0.806035912766;NKX2-1,4:0.766478538886;RFX2..5_RFXANK_RFXAP:0.748344765726;PAX6:0.741158415467;RXRA_VDR{dimer}:0.735330048922;NKX6-1,2:0.722006634715;BREu{core}:0.692227356658;MYOD1:0.650060619528;FOXQ1:0.627045560353;ELK1,4_GABP{A,B1}:0.615675162433;FOXN1:0.592270980685;VSX1,2:0.579889181828;YY1:0.553762267858;NFIL3:0.503188260514;NFATC1..3:0.460578801419;ZEB1:0.452412870541;ZBTB16:0.439313982122;ATF5_CREB3:0.396003042475;ADNP_IRX_SIX_ZHX:0.39446739086;SOX5:0.392012686826;FOXA2:0.37759904783;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.373598076363;TBX4,5:0.318308052773;NFKB1_REL_RELA:0.314355343481;NKX2-2,8:0.301075377096;SNAI1..3:0.292474271515;CUX2:0.272387371076;PRRX1,2:0.271424039919;PAX4:0.25582232842;NR1H4:0.248535777123;CEBPA,B_DDIT3:0.221345600462;HES1:0.191055037852;NANOG{mouse}:0.166488734549;PAX2:0.165911422981;FOXP3:0.165332300994;FOX{I1,J2}:0.162338925562;ALX1:0.162104744455;POU5F1:0.15788646019;TAL1_TCF{3,4,12}:0.122369886735;STAT2,4,6:0.113991039475;SOX2:0.103188929664;CREB1:0.0852625586102;LMO2:0.0509632862859;OCT4_SOX2{dimer}:0.0362956179025;AHR_ARNT_ARNT2:0.0308755454602;SREBF1,2:0.0040461758473;ARID5B:0.00135231065989;MYB:-0.0193576424345;ATF2:-0.0209590372004;STAT5{A,B}:-0.0338614889445;NR3C1:-0.0510722992528;FOXP1:-0.0733995604976;MYFfamily:-0.145959289279;NKX2-3_NKX2-5:-0.180042941289;NR5A1,2:-0.190217362724;NANOG:-0.191365027353;HAND1,2:-0.195481372432;SMAD1..7,9:-0.199687961304;EP300:-0.203077118737;HNF4A_NR2F1,2:-0.207236382236;POU2F1..3:-0.210522478279;NRF1:-0.220109284579;PITX1..3:-0.227060015954;HOX{A6,A7,B6,B7}:-0.245586751648;HNF1A:-0.250290616476;ZNF238:-0.250470245323;FOSL2:-0.254187235521;E2F1..5:-0.268404123571;ZNF143:-0.273656882781;ZNF148:-0.28253422647;AR:-0.290415375657;GLI1..3:-0.293208193973;JUN:-0.298395942003;DBP:-0.302347296036;ATF6:-0.318785061463;HLF:-0.329703431321;MTF1:-0.333231399871;NFE2L1:-0.35648280863;GCM1,2:-0.357107656261;ATF4:-0.370251631833;GATA4:-0.378179042179;BACH2:-0.378762932964;MAFB:-0.383028569622;NKX3-1:-0.388138250374;HBP1_HMGB_SSRP1_UBTF:-0.405361503657;ESR1:-0.405901000715;NHLH1,2:-0.435745021565;TFAP4:-0.441333015454;HMGA1,2:-0.466409290433;FOS_FOS{B,L1}_JUN{B,D}:-0.468121966207;NFE2L2:-0.475394147896;GFI1:-0.501590483917;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.521885450681;RFX1:-0.547749317051;SRF:-0.548876825863;NFY{A,B,C}:-0.549042462665;NFE2:-0.550705534725;RREB1:-0.570033347265;ZNF384:-0.611882509358;PAX8:-0.618440268493;TP53:-0.646786362441;MZF1:-0.648834545966;CDC5L:-0.667776574742;AIRE:-0.69130593759;FOXM1:-0.711038771767;MEF2{A,B,C,D}:-0.712200190613;ALX4:-0.728701771532;SOX{8,9,10}:-0.741829076582;REST:-0.747139746921;EN1,2:-0.798631972524;TFCP2:-0.823939544727;HOX{A5,B5}:-0.826753024992;KLF4:-0.846593925363;EBF1:-0.877236734824;LHX3,4:-0.897507493159;ZNF423:-0.901827728325;PRDM1:-0.9128483188;ZBTB6:-0.91755638621;EVI1:-0.926091972398;PAX5:-0.941498364198;HIF1A:-0.949380481646;GFI1B:-0.957512160805;ZFP161:-0.958694373519;EGR1..3:-0.979495858545;MTE{core}:-0.98260245819;MED-1{core}:-0.997416033221;PPARG:-1.03927520546;ONECUT1,2:-1.04995243991;NKX3-2:-1.11445051696;XBP1:-1.12147611008;NR6A1:-1.13182127989;MAZ:-1.13237807482;PATZ1:-1.13891468403;HOX{A4,D4}:-1.14538897784;TLX1..3_NFIC{dimer}:-1.15052367054;HIC1:-1.20401080846;HSF1,2:-1.20650793301;GTF2I:-1.22917040339;TBP:-1.25282547436;FOXL1:-1.26411405364;TOPORS:-1.26706594834;SOX17:-1.26820995039;HOXA9_MEIS1:-1.28879535753;TEF:-1.35417147788;MYBL2:-1.36319773552;GZF1:-1.36978356935;POU6F1:-1.3951193024;ZIC1..3:-1.39840212091;TFAP2B:-1.41501417202;RXR{A,B,G}:-1.41657887095;UFEwm:-1.42819716992;GTF2A1,2:-1.45884318189;bHLH_family:-1.59272839041;TFDP1:-1.60191019792;XCPE1{core}:-1.61911374772;POU3F1..4:-1.62133123343;TEAD1:-1.73919240384;SP1:-1.80790813062;ESRRA:-1.96028045974;TFAP2{A,C}:-2.23555771947;IKZF1:-2.42812314463;PAX1,9:-2.70890168701 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12201-129C5;search_select_hide=table117:FF:12201-129C5 | |||
}} | }} | ||
Latest revision as of 18:34, 4 June 2020
| Name: | CD8+ T Cells (pluriselect), donor090612, donation1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12182,RDhi10017 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12182
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12182
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.17 |
| 10 | 10 | 0.03 |
| 100 | 100 | 0.917 |
| 101 | 101 | 0.247 |
| 102 | 102 | 0.88 |
| 103 | 103 | 0.271 |
| 104 | 104 | 0.385 |
| 105 | 105 | 0.0699 |
| 106 | 106 | 0.32 |
| 107 | 107 | 0.876 |
| 108 | 108 | 0.84 |
| 109 | 109 | 0.102 |
| 11 | 11 | 0.0629 |
| 110 | 110 | 0.411 |
| 111 | 111 | 0.225 |
| 112 | 112 | 0.148 |
| 113 | 113 | 0.147 |
| 114 | 114 | 0.0899 |
| 115 | 115 | 0.136 |
| 116 | 116 | 0.982 |
| 117 | 117 | 0.0206 |
| 118 | 118 | 0.436 |
| 119 | 119 | 0.297 |
| 12 | 12 | 0.942 |
| 120 | 120 | 0.311 |
| 121 | 121 | 0.783 |
| 122 | 122 | 0.371 |
| 123 | 123 | 0.082 |
| 124 | 124 | 0.0648 |
| 125 | 125 | 0.984 |
| 126 | 126 | 0.16 |
| 127 | 127 | 0.3 |
| 128 | 128 | 0.342 |
| 129 | 129 | 0.469 |
| 13 | 13 | 0.638 |
| 130 | 130 | 0.853 |
| 131 | 131 | 0.614 |
| 132 | 132 | 0.932 |
| 133 | 133 | 0.681 |
| 134 | 134 | 0.757 |
| 135 | 135 | 0.125 |
| 136 | 136 | 0.611 |
| 137 | 137 | 0.0957 |
| 138 | 138 | 0.3 |
| 139 | 139 | 0.00591 |
| 14 | 14 | 0.333 |
| 140 | 140 | 0.0961 |
| 141 | 141 | 0.625 |
| 142 | 142 | 0.804 |
| 143 | 143 | 2.42703e-5 |
| 144 | 144 | 0.826 |
| 145 | 145 | 0.318 |
| 146 | 146 | 0.0996 |
| 147 | 147 | 0.0659 |
| 148 | 148 | 0.0535 |
| 149 | 149 | 0.54 |
| 15 | 15 | 0.0508 |
| 150 | 150 | 0.646 |
| 151 | 151 | 0.203 |
| 152 | 152 | 0.626 |
| 153 | 153 | 0.884 |
| 154 | 154 | 0.894 |
| 155 | 155 | 0.0777 |
| 156 | 156 | 0.528 |
| 157 | 157 | 0.593 |
| 158 | 158 | 0.186 |
| 159 | 159 | 0.223 |
| 16 | 16 | 0.575 |
| 160 | 160 | 0.458 |
| 161 | 161 | 0.34 |
| 162 | 162 | 0.394 |
| 163 | 163 | 0.824 |
| 164 | 164 | 0.476 |
| 165 | 165 | 0.201 |
| 166 | 166 | 0.689 |
| 167 | 167 | 0.326 |
| 168 | 168 | 0.112 |
| 169 | 169 | 0.353 |
| 17 | 17 | 0.483 |
| 18 | 18 | 0.395 |
| 19 | 19 | 0.915 |
| 2 | 2 | 0.492 |
| 20 | 20 | 0.547 |
| 21 | 21 | 0.345 |
| 22 | 22 | 0.743 |
| 23 | 23 | 0.521 |
| 24 | 24 | 0.471 |
| 25 | 25 | 0.0736 |
| 26 | 26 | 0.384 |
| 27 | 27 | 0.0492 |
| 28 | 28 | 0.549 |
| 29 | 29 | 0.212 |
| 3 | 3 | 0.0498 |
| 30 | 30 | 0.719 |
| 31 | 31 | 0.746 |
| 32 | 32 | 0.252 |
| 33 | 33 | 0.421 |
| 34 | 34 | 0.727 |
| 35 | 35 | 0.0561 |
| 36 | 36 | 0.0137 |
| 37 | 37 | 0.213 |
| 38 | 38 | 0.525 |
| 39 | 39 | 0.772 |
| 4 | 4 | 0.766 |
| 40 | 40 | 0.466 |
| 41 | 41 | 0.113 |
| 42 | 42 | 0.0674 |
| 43 | 43 | 0.176 |
| 44 | 44 | 0.527 |
| 45 | 45 | 0.911 |
| 46 | 46 | 0.0667 |
| 47 | 47 | 0.108 |
| 48 | 48 | 0.162 |
| 49 | 49 | 0.0972 |
| 5 | 5 | 0.113 |
| 50 | 50 | 0.691 |
| 51 | 51 | 0.515 |
| 52 | 52 | 0.637 |
| 53 | 53 | 0.159 |
| 54 | 54 | 0.449 |
| 55 | 55 | 0.167 |
| 56 | 56 | 0.543 |
| 57 | 57 | 0.454 |
| 58 | 58 | 0.0353 |
| 59 | 59 | 0.247 |
| 6 | 6 | 0.773 |
| 60 | 60 | 0.244 |
| 61 | 61 | 0.177 |
| 62 | 62 | 0.0125 |
| 63 | 63 | 0.497 |
| 64 | 64 | 0.192 |
| 65 | 65 | 0.473 |
| 66 | 66 | 0.924 |
| 67 | 67 | 0.897 |
| 68 | 68 | 0.81 |
| 69 | 69 | 0.784 |
| 7 | 7 | 0.146 |
| 70 | 70 | 0.0144 |
| 71 | 71 | 0.0621 |
| 72 | 72 | 0.129 |
| 73 | 73 | 0.68 |
| 74 | 74 | 0.241 |
| 75 | 75 | 0.0493 |
| 76 | 76 | 0.432 |
| 77 | 77 | 0.98 |
| 78 | 78 | 0.17 |
| 79 | 79 | 0.351 |
| 8 | 8 | 0.525 |
| 80 | 80 | 0.00737 |
| 81 | 81 | 0.282 |
| 82 | 82 | 0.0483 |
| 83 | 83 | 0.732 |
| 84 | 84 | 0.408 |
| 85 | 85 | 0.634 |
| 86 | 86 | 0.28 |
| 87 | 87 | 0.938 |
| 88 | 88 | 0.88 |
| 89 | 89 | 0.864 |
| 9 | 9 | 0.321 |
| 90 | 90 | 0.0278 |
| 91 | 91 | 0.621 |
| 92 | 92 | 0.121 |
| 93 | 93 | 0.153 |
| 94 | 94 | 0.0488 |
| 95 | 95 | 0.0468 |
| 96 | 96 | 0.0841 |
| 97 | 97 | 0.463 |
| 98 | 98 | 0.177 |
| 99 | 99 | 0.323 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12182
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000030 CD8-positive T cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)
