FF:12211-129D6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=RNA-Seq@SAMD00013684 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |accession_numbers=CAGE;DRX008071;DRR008943;DRZ000368;DRZ001753;DRZ011718;DRZ013103!RNA-Seq;DRX012352;DRR013800;DRZ003001; | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000625 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000030 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!1.98!94.43!PLEK;;chr17:45810594..45810608,+!p1@TBX21!1.94!85.40!TBX21;;chr3:27763807..27763822,-!p1@EOMES!1.92!81.29!EOMES;;chr1:25256756..25256774,-!p1@RUNX3!1.77!105.10!RUNX3;;chr2:192015701..192015743,-!p1@STAT4!1.76!76.36!STAT4;;chr5:133451294..133451310,+!p2@TCF7!1.75!55.84!TCF7;;chr7:50343634..50343717,+!p2@IKZF1!1.75!55.02!IKZF1;;chr2:68592394..68592405,+!p2@PLEK!1.72!50.91!PLEK;;chr2:231090433..231090469,+!p1@SP140!1.69!47.63!SP140;;chr2:192015750..192015793,-!p2@STAT4!1.67!60.76!STAT4;;chr9:117150254..117150271,-!p1@AKNA!1.64!114.14!AKNA;;chr17:37934365..37934387,-!p2@IKZF3!1.63!41.88!IKZF3;;chr3:63953435..63953499,+!p1@ATXN7!1.60!38.59!ATXN7;;chr4:109087445..109087463,-!p1@LEF1!1.57!36.13!LEF1;;chr14:75988771..75988826,+!p1@BATF!1.55!45.98!BATF;;chr1:26697243..26697258,-!p1@ZNF683!1.53!32.85!ZNF683;;chr19:16435625..16435682,+!p1@KLF2!1.50!928.70!KLF2;;chr20:50159198..50159299,-!p1@NFATC2!1.49!43.52!NFATC2;;chr4:57522166..57522260,-!p2@HOPX!1.49!34.49!HOPX;;chr5:133450365..133450444,+!p1@TCF7!1.47!124.81!TCF7;;chr4:57522598..57522664,-!p3@HOPX!1.42!25.45!HOPX;;chr7:50344251..50344288,+!p3@IKZF1!1.39!23.81!IKZF1;;chr17:37934204..37934241,-!p3@IKZF3!1.38!22.99!IKZF3;;chr19:19779619..19779670,+!p1@ZNF101!1.37!62.41!ZNF101;;chr15:60884706..60884743,-!p1@RORA!1.35!108.39!RORA;;chr7:50343895..50343936,+!p5@IKZF1!1.35!21.35!IKZF1;;chr5:133451347..133451358,+!p3@TCF7!1.32!19.71!TCF7;;chr20:56195474..56195506,-!p1@ZBP1!1.26!17.24!ZBP1;;chr6:106546808..106546833,+!p3@PRDM1!1.24!20.53!PRDM1;;chr3:18486354..18486377,-!p2@SATB1!1.24!20.53!SATB1;;chr11:128392273..128392308,-!p2@ETS1!1.22!64.87!ETS1;;chr2:231090471..231090504,+!p2@SP140!1.22!15.60!SP140;;chr4:109090075..109090095,-!p2@LEF1!1.22!15.60!LEF1;;chr17:38020557..38020572,-!p4@IKZF3!1.22!15.60!IKZF3;;chr4:57522674..57522699,-!p5@HOPX!1.20!14.78!HOPX;;chr8:67525443..67525459,-!p2@MYBL1!1.19!21.35!MYBL1;;chr3:71355163..71355209,-!p5@FOXP1!1.18!19.71!FOXP1;;chr3:71542615..71542644,-!p12@FOXP1!1.17!13.96!FOXP1;;chr17:37934280..37934299,-!p6@IKZF3!1.17!13.96!IKZF3;;chr17:38020516..38020544,-!p5@IKZF3!1.17!13.96!IKZF3;;chr11:128392085..128392232,-!p1@ETS1!1.16!449.98!ETS1;;chr13:41593425..41593480,-!p1@ELF1!1.14!80.47!ELF1;;chr17:38020392..38020477,-!p1@IKZF3!1.12!12.32!IKZF3;;chr7:50344289..50344323,+!p1@IKZF1!1.12!12.32!IKZF1;;chr1:26697189..26697205,-!p2@ZNF683!1.12!12.32!ZNF683;;chr11:128563948..128564003,+!p1@FLI1!1.10!140.41!FLI1;;chr14:64970670..64970712,-!p3@ZBTB25!1.10!25.45!ZBTB25;;chr6:106546731..106546755,+!p5@PRDM1!1.10!11.50!PRDM1;;chr7:137620650..137620677,-!p3@CREB3L2!1.10!11.50!CREB3L2;;chr3:71542684..71542720,-!p18@FOXP1!1.10!11.50!FOXP1;;chr4:57522513..57522548,-!p4@HOPX!1.07!10.67!HOPX;;chr14:75988831..75988847,+!p2@BATF!1.07!10.67!BATF;;chr10:8096772..8096787,+!p2@GATA3!1.06!12.32!GATA3;;chrX:106960285..106960299,-!p1@TSC22D3!1.05!277.54!TSC22D3;;chr4:81104895..81104920,+!p2@PRDM8!1.05!15.60!PRDM8;;chr13:74707894..74707947,-!p6@KLF12!1.05!11.50!KLF12;;chr2:97202991..97203043,+!p3@ARID5A!1.04!9.85!ARID5A;;chr4:109089901..109089930,-!p3@LEF1!1.04!9.85!LEF1;;chr6:391743..391759,+!p1@IRF4!1.04!9.85!IRF4;;chr6:106546786..106546802,+!p6@PRDM1!1.00!9.03!PRDM1;;chr7:50344144..50344157,+!p6@IKZF1!1.00!9.03!IKZF1;;chr20:52226313..52226350,-!p3@ZNF217!1.00!9.03!ZNF217;;chr16:89789271..89789291,+!p5@ZNF276!1.00!9.03!ZNF276;;chr9:3525727..3525828,-!p2@RFX3!0.99!22.99!RFX3;;chr8:60031619..60031676,-!p1@TOX!0.98!18.89!TOX;;chr8:67525473..67525518,-!p1@MYBL1!0.97!19.71!MYBL1;;chr20:44600199..44600219,-!p3@ZNF335!0.97!11.50!ZNF335;;chr9:117150303..117150312,-!p3@AKNA!0.97!10.67!AKNA;;chr16:88752889..88752921,-!p1@SNAI3!0.97!9.85!SNAI3;;chr3:71179699..71179744,-!p2@FOXP1!0.96!62.41!FOXP1;;chr19:38085768..38085821,+!p1@ZNF540!0.96!12.32!ZNF540;;chr1:92951607..92951661,-!p1@GFI1!0.96!8.21!GFI1;;chr3:18487057..18487105,-!p4@SATB1!0.96!8.21!SATB1;;chr11:47400078..47400106,-!p1@SPI1!0.96!8.21!SPI1;;chr6:91006518..91006570,-!p1@BACH2!0.94!18.06!BACH2;;chr19:53289995..53290050,-!p1@ZNF600!0.93!32.02!ZNF600;;chr17:36861675..36861697,+!p3@MLLT6!0.93!18.06!MLLT6;;chrX:101186981..101187030,-!p1@ZMAT1!0.92!24.63!ZMAT1;;chr4:109088940..109089037,-!p4@LEF1!0.92!7.39!LEF1;;chr13:74708029..74708077,-!p2@KLF12!0.91!21.35!KLF12;;chr17:36861735..36861755,+!p4@MLLT6!0.91!12.32!MLLT6;;chr6:45296048..45296082,+!p1@RUNX2!0.91!8.21!RUNX2;;chr16:68119324..68119364,+!p1@NFATC3!0.89!32.02!NFATC3;;chr21:36421535..36421610,-!p2@RUNX1!0.89!25.45!RUNX1;;chr10:8096631..8096660,+!p1@GATA3!0.89!8.21!GATA3;;chr19:19729477..19729542,-!p1@PBX4!0.88!14.78!PBX4;;chr17:38020607..38020621,-!p9@IKZF3!0.88!6.57!IKZF3;;chr21:36421347..36421380,-!p8@RUNX1!0.88!6.57!RUNX1;;chr3:18480217..18480239,-!p3@SATB1!0.88!6.57!SATB1;;chr3:71542651..71542683,-!p22@FOXP1!0.88!6.57!FOXP1;;chr4:109089573..109089585,-!p8@LEF1!0.88!6.57!LEF1;;chr4:149363494..149363543,-!p1@NR3C2!0.88!6.57!NR3C2;;chr16:89787937..89787971,+!p1@ZNF276!0.87!17.24!ZNF276;;chr16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| |expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!1.98!94.43!PLEK;;chr17:45810594..45810608,+!p1@TBX21!1.94!85.40!TBX21;;chr3:27763807..27763822,-!p1@EOMES!1.92!81.29!EOMES;;chr1:25256756..25256774,-!p1@RUNX3!1.77!105.10!RUNX3;;chr2:192015701..192015743,-!p1@STAT4!1.76!76.36!STAT4;;chr5:133451294..133451310,+!p2@TCF7!1.75!55.84!TCF7;;chr7:50343634..50343717,+!p2@IKZF1!1.75!55.02!IKZF1;;chr2:68592394..68592405,+!p2@PLEK!1.72!50.91!PLEK;;chr2:231090433..231090469,+!p1@SP140!1.69!47.63!SP140;;chr2:192015750..192015793,-!p2@STAT4!1.67!60.76!STAT4;;chr9:117150254..117150271,-!p1@AKNA!1.64!114.14!AKNA;;chr17:37934365..37934387,-!p2@IKZF3!1.63!41.88!IKZF3;;chr3:63953435..63953499,+!p1@ATXN7!1.60!38.59!ATXN7;;chr4:109087445..109087463,-!p1@LEF1!1.57!36.13!LEF1;;chr14:75988771..75988826,+!p1@BATF!1.55!45.98!BATF;;chr1:26697243..26697258,-!p1@ZNF683!1.53!32.85!ZNF683;;chr19:16435625..16435682,+!p1@KLF2!1.50!928.70!KLF2;;chr20:50159198..50159299,-!p1@NFATC2!1.49!43.52!NFATC2;;chr4:57522166..57522260,-!p2@HOPX!1.49!34.49!HOPX;;chr5:133450365..133450444,+!p1@TCF7!1.47!124.81!TCF7;;chr4:57522598..57522664,-!p3@HOPX!1.42!25.45!HOPX;;chr7:50344251..50344288,+!p3@IKZF1!1.39!23.81!IKZF1;;chr17:37934204..37934241,-!p3@IKZF3!1.38!22.99!IKZF3;;chr19:19779619..19779670,+!p1@ZNF101!1.37!62.41!ZNF101;;chr15:60884706..60884743,-!p1@RORA!1.35!108.39!RORA;;chr7:50343895..50343936,+!p5@IKZF1!1.35!21.35!IKZF1;;chr5:133451347..133451358,+!p3@TCF7!1.32!19.71!TCF7;;chr20:56195474..56195506,-!p1@ZBP1!1.26!17.24!ZBP1;;chr6:106546808..106546833,+!p3@PRDM1!1.24!20.53!PRDM1;;chr3:18486354..18486377,-!p2@SATB1!1.24!20.53!SATB1;;chr11:128392273..128392308,-!p2@ETS1!1.22!64.87!ETS1;;chr2:231090471..231090504,+!p2@SP140!1.22!15.60!SP140;;chr4:109090075..109090095,-!p2@LEF1!1.22!15.60!LEF1;;chr17:38020557..38020572,-!p4@IKZF3!1.22!15.60!IKZF3;;chr4:57522674..57522699,-!p5@HOPX!1.20!14.78!HOPX;;chr8:67525443..67525459,-!p2@MYBL1!1.19!21.35!MYBL1;;chr3:71355163..71355209,-!p5@FOXP1!1.18!19.71!FOXP1;;chr3:71542615..71542644,-!p12@FOXP1!1.17!13.96!FOXP1;;chr17:37934280..37934299,-!p6@IKZF3!1.17!13.96!IKZF3;;chr17:38020516..38020544,-!p5@IKZF3!1.17!13.96!IKZF3;;chr11:128392085..128392232,-!p1@ETS1!1.16!449.98!ETS1;;chr13:41593425..41593480,-!p1@ELF1!1.14!80.47!ELF1;;chr17:38020392..38020477,-!p1@IKZF3!1.12!12.32!IKZF3;;chr7:50344289..50344323,+!p1@IKZF1!1.12!12.32!IKZF1;;chr1:26697189..26697205,-!p2@ZNF683!1.12!12.32!ZNF683;;chr11:128563948..128564003,+!p1@FLI1!1.10!140.41!FLI1;;chr14:64970670..64970712,-!p3@ZBTB25!1.10!25.45!ZBTB25;;chr6:106546731..106546755,+!p5@PRDM1!1.10!11.50!PRDM1;;chr7:137620650..137620677,-!p3@CREB3L2!1.10!11.50!CREB3L2;;chr3:71542684..71542720,-!p18@FOXP1!1.10!11.50!FOXP1;;chr4:57522513..57522548,-!p4@HOPX!1.07!10.67!HOPX;;chr14:75988831..75988847,+!p2@BATF!1.07!10.67!BATF;;chr10:8096772..8096787,+!p2@GATA3!1.06!12.32!GATA3;;chrX:106960285..106960299,-!p1@TSC22D3!1.05!277.54!TSC22D3;;chr4:81104895..81104920,+!p2@PRDM8!1.05!15.60!PRDM8;;chr13:74707894..74707947,-!p6@KLF12!1.05!11.50!KLF12;;chr2:97202991..97203043,+!p3@ARID5A!1.04!9.85!ARID5A;;chr4:109089901..109089930,-!p3@LEF1!1.04!9.85!LEF1;;chr6:391743..391759,+!p1@IRF4!1.04!9.85!IRF4;;chr6:106546786..106546802,+!p6@PRDM1!1.00!9.03!PRDM1;;chr7:50344144..50344157,+!p6@IKZF1!1.00!9.03!IKZF1;;chr20:52226313..52226350,-!p3@ZNF217!1.00!9.03!ZNF217;;chr16:89789271..89789291,+!p5@ZNF276!1.00!9.03!ZNF276;;chr9:3525727..3525828,-!p2@RFX3!0.99!22.99!RFX3;;chr8:60031619..60031676,-!p1@TOX!0.98!18.89!TOX;;chr8:67525473..67525518,-!p1@MYBL1!0.97!19.71!MYBL1;;chr20:44600199..44600219,-!p3@ZNF335!0.97!11.50!ZNF335;;chr9:117150303..117150312,-!p3@AKNA!0.97!10.67!AKNA;;chr16:88752889..88752921,-!p1@SNAI3!0.97!9.85!SNAI3;;chr3:71179699..71179744,-!p2@FOXP1!0.96!62.41!FOXP1;;chr19:38085768..38085821,+!p1@ZNF540!0.96!12.32!ZNF540;;chr1:92951607..92951661,-!p1@GFI1!0.96!8.21!GFI1;;chr3:18487057..18487105,-!p4@SATB1!0.96!8.21!SATB1;;chr11:47400078..47400106,-!p1@SPI1!0.96!8.21!SPI1;;chr6:91006518..91006570,-!p1@BACH2!0.94!18.06!BACH2;;chr19:53289995..53290050,-!p1@ZNF600!0.93!32.02!ZNF600;;chr17:36861675..36861697,+!p3@MLLT6!0.93!18.06!MLLT6;;chrX:101186981..101187030,-!p1@ZMAT1!0.92!24.63!ZMAT1;;chr4:109088940..109089037,-!p4@LEF1!0.92!7.39!LEF1;;chr13:74708029..74708077,-!p2@KLF12!0.91!21.35!KLF12;;chr17:36861735..36861755,+!p4@MLLT6!0.91!12.32!MLLT6;;chr6:45296048..45296082,+!p1@RUNX2!0.91!8.21!RUNX2;;chr16:68119324..68119364,+!p1@NFATC3!0.89!32.02!NFATC3;;chr21:36421535..36421610,-!p2@RUNX1!0.89!25.45!RUNX1;;chr10:8096631..8096660,+!p1@GATA3!0.89!8.21!GATA3;;chr19:19729477..19729542,-!p1@PBX4!0.88!14.78!PBX4;;chr17:38020607..38020621,-!p9@IKZF3!0.88!6.57!IKZF3;;chr21:36421347..36421380,-!p8@RUNX1!0.88!6.57!RUNX1;;chr3:18480217..18480239,-!p3@SATB1!0.88!6.57!SATB1;;chr3:71542651..71542683,-!p22@FOXP1!0.88!6.57!FOXP1;;chr4:109089573..109089585,-!p8@LEF1!0.88!6.57!LEF1;;chr4:149363494..149363543,-!p1@NR3C2!0.88!6.57!NR3C2;;chr16:89787937..89787971,+!p1@ZNF276!0.87!17.24!ZNF276;;chr16:79634624..79634642,-!p1@MAF!0.85!25.45!MAF;;chr14:64971288..64971316,-!p2@ZBTB25!0.85!19.71!ZBTB25;;chr2:178128250..178128293,-!p6@NFE2L2!0.84!15.60!NFE2L2;;chr15:60884747..60884774,-!p3@RORA!0.83!14.78!RORA;;chr14:99738138..99738163,-!p1@BCL11B!0.83!5.75!BCL11B;;chr17:45810816..45810838,+!p2@TBX21!0.83!5.75!TBX21;;chr4:109088089..109088101,-!p11@LEF1!0.83!5.75!LEF1;;chr20:56195525..56195556,-!p2@ZBP1!0.83!5.75!ZBP1;;chr7:63505799..63505904,+!p1@ZNF727!0.83!5.75!ZNF727;;chr19:9546177..9546224,-!p1@ZNF266!0.82!42.70!ZNF266;;chr4:140005443..140005527,-!p2@ELF2!0.82!35.31!ELF2;;chr11:128392309..128392350,-!p3@ETS1!0.82!13.96!ETS1;;chr17:46621311..46621332,-!p8@HOXB2!0.82!7.39!HOXB2;;chr19:37464063..37464127,+!p2@ZNF568!0.81!7.39!ZNF568;;chr14:90085458..90085557,-!p1@FOXN3!0.80!59.94!FOXN3;;chr2:97202480..97202499,+!p1@ARID5A!0.80!58.30!ARID5A;;chr19:58220517..58220583,-!p1@ZNF154!0.80!18.06!ZNF154;;chr2:148778973..148779035,+!p3@MBD5!0.80!14.78!MBD5;;chr18:5295679..5295734,-!p2@ZFP161!0.80!12.32!ZFP161;;chr16:68573640..68573660,+!p3@ZFP90!0.80!7.39!ZFP90;;chrX:131624056..131624069,-!p2@MBNL3!0.80!7.39!MBNL3;;chr4:38665769..38665801,+!p2@KLF3!0.79!50.91!KLF3;;chr19:20748574..20748599,-!p1@ZNF737!0.79!33.67!ZNF737;;chr16:30583204..30583233,-!p5@ZNF688!0.79!6.57!ZNF688;;chr11:13299319..13299424,+!p1@ARNTL!0.78!55.02!ARNTL;;chr9:3525867..3525902,-!p3@RFX3!0.78!18.89!RFX3;;chr19:23941680..23941704,-!p1@ZNF681!0.78!15.60!ZNF681;;chr16:89789248..89789270,+!p8@ZNF276!0.77!4.93!ZNF276;;chr17:38020481..38020506,-!p7@IKZF3!0.77!4.93!IKZF3;;chr2:192015677..192015691,-!p3@STAT4!0.77!4.93!STAT4;;chr6:106546834..106546850,+!p4@PRDM1!0.77!4.93!PRDM1;;chr1:10754477..10754517,-!p1@CASZ1!0.76!8.21!CASZ1;;chr6:91006575..91006602,-!p2@BACH2!0.76!7.39!BACH2;;chr1:45805693..45805718,+!p3@TOE1!0.75!10.67!TOE1;;chr16:79634595..79634620,-!p2@MAF!0.75!9.03!MAF;;chr19:12405645..12405685,-!p1@ZNF44!0.74!17.24!ZNF44;;chr19:12444440..12444455,-!p1@ZNF563!0.74!8.21!ZNF563;;chr4:185395191..185395226,-!p4@IRF2!0.74!6.57!IRF2;;chr18:3449720..3449749,+!p2@TGIF1!0.73!9.85!TGIF1;;chr16:89787973..89788001,+!p3@ZNF276!0.73!9.03!ZNF276;;chr5:131826457..131826514,-!p1@IRF1!0.72!188.86!IRF1;;chr7:99097863..99097936,-!p1@ZNF394!0.72!47.63!ZNF394;;chr19:9546227..9546257,-!p2@ZNF266!0.72!24.63!ZNF266;;chr7:21467674..21467727,+!p1@SP4!0.72!18.89!SP4;;chr16:68119440..68119480,+!p4@NFATC3!0.72!7.39!NFATC3;;chr19:53039233..53039247,+!p2@ZNF808!0.72!6.57!ZNF808;;chr2:145274981..145274994,-!p9@ZEB2!0.72!6.57!ZEB2;;chr16:68118689..68118733,+!p3@NFATC3!0.71!11.50!NFATC3;;chr16:88752861..88752884,-!p2@SNAI3!0.71!4.11!SNAI3;;chr7:50348268..50348366,+!p4@IKZF1!0.71!4.11!IKZF1;;chr8:60031563..60031574,-!p7@TOX!0.71!4.11!TOX;;chrX:118740008..118740045,-!p3@NKRF!0.71!4.11!NKRF;;chr2:231090344..231090361,-!p3@SP110!0.71!4.11!SP110;;chr3:27764190..27764208,-!p2@EOMES!0.71!4.11!EOMES;;chr4:57522701..57522712,-!p10@HOPX!0.71!4.11!HOPX;;chr1:158978768..158978800,+!p8@IFI16!0.71!4.11!IFI16;;chr20:52226401..52226412,-!p16@ZNF217!0.71!4.11!ZNF217;;chr2:145277640..145277771,-!p1@ZEB2!0.70!61.58!ZEB2;;chr19:49140609..49140643,-!p1@DBP!0.70!25.45!DBP;;chr19:58694742..58694800,+!p2@ZNF274!0.70!18.06!ZNF274;;chr6:12008986..12009016,+!p3@HIVEP1!0.70!13.96!HIVEP1;;chr14:65569101..65569119,-!p3@MAX!0.70!13.96!MAX;;chr19:52674696..52674758,-!p1@ZNF836!0.70!13.14!ZNF836;;chr11:16759983..16760029,-!p2@SOX6!0.70!6.57!SOX6;;chr19:37341160..37341194,-!p2@ZNF790!0.69!9.03!ZNF790;;chr9:2016724..2016752,+!p7@SMARCA2!0.69!8.21!SMARCA2;;chr14:69262947..69262986,-!p3@ZFP36L1!0.69!4.93!ZFP36L1;;chr10:104154246..104154347,+!p3@NFKB2!0.68!26.28!NFKB2;;chr6:109804367..109804402,-!p2@ZBTB24!0.68!12.32!ZBTB24;;chrX:131623932..131623964,-!p7@MBNL3!0.68!5.75!MBNL3;;chr8:72756023..72756055,-!p6@MSC!0.68!4.93!MSC;;chr4:81104865..81104886,+!p6@PRDM8!0.68!4.11!PRDM8;;chr19:19976634..19976677,+!p2@ZNF253!0.67!14.78!ZNF253;;chr16:3313791..3313834,+!p2@ZNF263!0.67!9.03!ZNF263;;chr19:12512062..12512094,-!p1@ZNF799!0.67!8.21!ZNF799;;chr12:133707021..133707071,-!p2@ZNF891!0.67!6.57!ZNF891;;chr8:67525524..67525543,-!p3@MYBL1!0.67!6.57!MYBL1;;chr16:30583169..30583200,-!p2@ZNF688!0.67!5.75!ZNF688;;chrX:131623982..131624011,-!p6@MBNL3!0.67!5.75!MBNL3;;chr8:71316021..71316068,-!p1@NCOA2!0.66!38.59!NCOA2;;chr19:19843900..19843928,-!p1@ZNF14!0.66!20.53!ZNF14;;chr2:208394817..208394834,+!p3@CREB1!0.66!16.42!CREB1;;chr19:53868940..53868990,+!p1@ZNF525,p2@ZNF765!0.66!11.50!ZNF525;;chr3:141121847..141121868,+!p5@ZBTB38!0.66!5.75!ZBTB38;;chr19:57183114..57183145,-!p1@ZNF835!0.66!4.11!ZNF835;;chr7:64838786..64838809,+!p2@ZNF92!0.65!22.99!ZNF92;;chr19:37709076..37709154,+!p1@ZNF383!0.65!13.14!ZNF383;;chr8:123793860..123793921,+!p2@ZHX2!0.65!10.67!ZHX2;;chr3:114819124..114819200,-!p3@ZBTB20!0.65!9.03!ZBTB20;;chr16:79633894..79633954,-!p3@MAF!0.65!7.39!MAF;;chr11:85375237..85375277,-!p4@CREBZF!0.65!4.11!CREBZF;;chr5:172483347..172483407,+!p1@C5orf41!0.64!29.56!CREBRF;;chr7:64126503..64126528,+!p1@ZNF107!0.64!27.92!ZNF107;;chr3:1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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000625;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988 | |||
|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation3.CNhs12187.12211-129D6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation3.CNhs12187.12211-129D6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation3.CNhs12187.12211-129D6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation3.CNhs12187.12211-129D6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation3.CNhs12187.12211-129D6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12211-129D6 | |id=FF:12211-129D6 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000030;;FF:0000210 | ||
|is_obsolete= | |||
|library_id=CNhs12187!RDhi10019 | |||
|library_id_phase_based=2:CNhs12187 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12211 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12211 | |||
|name=CD8+ T Cells (pluriselect), donor090612, donation3 | |name=CD8+ T Cells (pluriselect), donor090612, donation3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12187,LSID975,release011,COMPLETED | |profile_hcage=CNhs12187,LSID975,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=129 | |rna_box=129 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 57: | Line 79: | ||
|rna_weight_ug=1.98612 | |rna_weight_ug=1.98612 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 77: | Line 100: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=T:2.69982958591;RUNX1..3:2.21910535594;ELF1,2,4:2.16218329194;TLX2:2.01182537353;ETS1,2:1.87797198605;FOX{F1,F2,J1}:1.852788427;PAX3,7:1.78825856097;RORA:1.75633817765;CDX1,2,4:1.67557423532;PDX1:1.62836504828;FOXO1,3,4:1.6119441119;FOX{D1,D2}:1.56255123478;DMAP1_NCOR{1,2}_SMARC:1.43528642454;SPI1:1.37109113285;IRF1,2:1.33982398138;ELK1,4_GABP{A,B1}:1.33961828066;LEF1_TCF7_TCF7L1,2:1.32276940526;FOX{I1,J2}:1.22207584497;STAT1,3:1.19763306463;GATA6:1.18641869294;SPIB:1.10752069576;IKZF2:1.10095181989;PAX6:1.08159029183;HMX1:1.07623138664;SPZ1:1.04668756134;PBX1:0.908771191287;NANOG{mouse}:0.890332798059;NR1H4:0.785713102247;RFX2..5_RFXANK_RFXAP:0.77989726741;FOXA2:0.77978773631;IRF7:0.774390375817;VSX1,2:0.731441583064;TGIF1:0.726466145896;CRX:0.705224039195;NKX2-2,8:0.69159968851;MYOD1:0.686086457951;YY1:0.642218776359;NKX6-1,2:0.626785024107;BPTF:0.617485196348;CREB1:0.610740399345;BREu{core}:0.610678630594;NFIX:0.545418228583;PAX4:0.544785682623;ZBTB16:0.50020401143;ZEB1:0.443131205932;ATF5_CREB3:0.436770648566;ALX1:0.419275054938;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.410319918836;SOX5:0.385791177471;HES1:0.378811846541;ZNF148:0.290080715525;PRRX1,2:0.270639650694;SNAI1..3:0.24744866952;HOX{A6,A7,B6,B7}:0.231227206076;FOXN1:0.2183224324;NFKB1_REL_RELA:0.203943427397;RBPJ:0.192011560951;CUX2:0.187029897555;LMO2:0.177033452422;SOX2:0.173424876594;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.172352383323;AR:0.140149743614;NKX3-1:0.13343291499;ATF2:0.131230643187;NFATC1..3:0.124791985956;NKX2-1,4:0.123286098052;NRF1:0.0972143966439;OCT4_SOX2{dimer}:0.0755590448412;FOXP3:0.0754969926062;SREBF1,2:0.0656615152793;ADNP_IRX_SIX_ZHX:0.0605937019557;PAX2:0.0483619740513;RXRA_VDR{dimer}:0.0424570447587;MYB:0.0334352634693;TAL1_TCF{3,4,12}:0.0175676932803;EP300:0.00774600789263;NFIL3:-0.0400136317314;NR5A1,2:-0.0540133710409;ZNF143:-0.0579575162734;POU2F1..3:-0.0876946846145;HAND1,2:-0.102235150608;AHR_ARNT_ARNT2:-0.109208594753;HBP1_HMGB_SSRP1_UBTF:-0.136107747617;FOXP1:-0.178398317298;HNF4A_NR2F1,2:-0.19957759286;GFI1:-0.223617334368;FOXD3:-0.232370635071;HMGA1,2:-0.24220037865;HNF1A:-0.251314599934;NFE2L2:-0.282230792221;FOSL2:-0.285511789635;E2F1..5:-0.289022395112;JUN:-0.292296569291;STAT5{A,B}:-0.297291744865;MAFB:-0.313423298943;POU1F1:-0.320270426666;STAT2,4,6:-0.321921112887;ATF6:-0.332927560801;FOXQ1:-0.337968923634;NFY{A,B,C}:-0.339617237282;ALX4:-0.354084338325;TFCP2:-0.377651991204;CEBPA,B_DDIT3:-0.378613488107;GCM1,2:-0.379827507859;MYFfamily:-0.384439467853;NANOG:-0.390018259381;ZNF384:-0.399497999019;BACH2:-0.415007941132;TFAP4:-0.417709818723;FOXM1:-0.432151535394;NKX2-3_NKX2-5:-0.443112400054;ATF4:-0.464218248734;POU5F1:-0.47764950496;HLF:-0.4820915816;ZBTB6:-0.483020522866;MTF1:-0.483923287708;FOS_FOS{B,L1}_JUN{B,D}:-0.492094837106;RFX1:-0.505896500504;NHLH1,2:-0.542743555576;PAX5:-0.545473998734;MEF2{A,B,C,D}:-0.569455101632;NFE2L1:-0.569653973324;ZNF238:-0.584884619864;LHX3,4:-0.62936595381;SMAD1..7,9:-0.630181216327;NFE2:-0.633188348306;TBX4,5:-0.643537069756;RREB1:-0.647546655131;REST:-0.658673402146;ARID5B:-0.673204535371;CDC5L:-0.687128757562;ZFP161:-0.70413725896;ESR1:-0.72518588147;HOX{A4,D4}:-0.728566433587;HOXA9_MEIS1:-0.730675794653;GLI1..3:-0.732260381755;PITX1..3:-0.737570577284;SRF:-0.750243424738;EGR1..3:-0.760940136274;EVI1:-0.765596918341;AIRE:-0.776316611731;HIF1A:-0.780243586119;ONECUT1,2:-0.859972678759;TP53:-0.862409744804;MAZ:-0.866113040591;PAX8:-0.879317218381;FOXL1:-0.884529129985;MED-1{core}:-0.88809710699;MZF1:-0.892608728436;NR3C1:-0.90430541367;ZNF423:-0.931609894543;PRDM1:-0.948837406727;PPARG:-0.950820289519;DBP:-0.960358297842;HOX{A5,B5}:-1.00937674764;EN1,2:-1.03203212919;NR6A1:-1.04279594579;MTE{core}:-1.06064684366;TFDP1:-1.06299143133;GZF1:-1.07115227695;SOX{8,9,10}:-1.0742601185;GATA4:-1.10246114344;bHLH_family:-1.10592469287;SOX17:-1.14192548443;GTF2I:-1.15054776972;TFAP2B:-1.17241489937;HSF1,2:-1.18270858012;GFI1B:-1.19338304677;KLF4:-1.22063279881;TEF:-1.23757180381;TLX1..3_NFIC{dimer}:-1.24430224894;XCPE1{core}:-1.26043930057;PATZ1:-1.27342759489;TOPORS:-1.27603592751;MYBL2:-1.28356053234;HIC1:-1.29730963345;UFEwm:-1.30274268269;TBP:-1.37317365902;ESRRA:-1.37421541154;ZIC1..3:-1.37900655969;EBF1:-1.39903369455;XBP1:-1.442384505;POU6F1:-1.50947006899;NKX3-2:-1.52588062581;TEAD1:-1.61595472642;RXR{A,B,G}:-1.7462693793;TFAP2{A,C}:-1.83362242185;SP1:-1.86084051086;GTF2A1,2:-1.89683125486;POU3F1..4:-1.91980132911;PAX1,9:-2.23711739271;IKZF1:-2.31578723594 | |top_motifs=T:2.69982958591;RUNX1..3:2.21910535594;ELF1,2,4:2.16218329194;TLX2:2.01182537353;ETS1,2:1.87797198605;FOX{F1,F2,J1}:1.852788427;PAX3,7:1.78825856097;RORA:1.75633817765;CDX1,2,4:1.67557423532;PDX1:1.62836504828;FOXO1,3,4:1.6119441119;FOX{D1,D2}:1.56255123478;DMAP1_NCOR{1,2}_SMARC:1.43528642454;SPI1:1.37109113285;IRF1,2:1.33982398138;ELK1,4_GABP{A,B1}:1.33961828066;LEF1_TCF7_TCF7L1,2:1.32276940526;FOX{I1,J2}:1.22207584497;STAT1,3:1.19763306463;GATA6:1.18641869294;SPIB:1.10752069576;IKZF2:1.10095181989;PAX6:1.08159029183;HMX1:1.07623138664;SPZ1:1.04668756134;PBX1:0.908771191287;NANOG{mouse}:0.890332798059;NR1H4:0.785713102247;RFX2..5_RFXANK_RFXAP:0.77989726741;FOXA2:0.77978773631;IRF7:0.774390375817;VSX1,2:0.731441583064;TGIF1:0.726466145896;CRX:0.705224039195;NKX2-2,8:0.69159968851;MYOD1:0.686086457951;YY1:0.642218776359;NKX6-1,2:0.626785024107;BPTF:0.617485196348;CREB1:0.610740399345;BREu{core}:0.610678630594;NFIX:0.545418228583;PAX4:0.544785682623;ZBTB16:0.50020401143;ZEB1:0.443131205932;ATF5_CREB3:0.436770648566;ALX1:0.419275054938;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.410319918836;SOX5:0.385791177471;HES1:0.378811846541;ZNF148:0.290080715525;PRRX1,2:0.270639650694;SNAI1..3:0.24744866952;HOX{A6,A7,B6,B7}:0.231227206076;FOXN1:0.2183224324;NFKB1_REL_RELA:0.203943427397;RBPJ:0.192011560951;CUX2:0.187029897555;LMO2:0.177033452422;SOX2:0.173424876594;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.172352383323;AR:0.140149743614;NKX3-1:0.13343291499;ATF2:0.131230643187;NFATC1..3:0.124791985956;NKX2-1,4:0.123286098052;NRF1:0.0972143966439;OCT4_SOX2{dimer}:0.0755590448412;FOXP3:0.0754969926062;SREBF1,2:0.0656615152793;ADNP_IRX_SIX_ZHX:0.0605937019557;PAX2:0.0483619740513;RXRA_VDR{dimer}:0.0424570447587;MYB:0.0334352634693;TAL1_TCF{3,4,12}:0.0175676932803;EP300:0.00774600789263;NFIL3:-0.0400136317314;NR5A1,2:-0.0540133710409;ZNF143:-0.0579575162734;POU2F1..3:-0.0876946846145;HAND1,2:-0.102235150608;AHR_ARNT_ARNT2:-0.109208594753;HBP1_HMGB_SSRP1_UBTF:-0.136107747617;FOXP1:-0.178398317298;HNF4A_NR2F1,2:-0.19957759286;GFI1:-0.223617334368;FOXD3:-0.232370635071;HMGA1,2:-0.24220037865;HNF1A:-0.251314599934;NFE2L2:-0.282230792221;FOSL2:-0.285511789635;E2F1..5:-0.289022395112;JUN:-0.292296569291;STAT5{A,B}:-0.297291744865;MAFB:-0.313423298943;POU1F1:-0.320270426666;STAT2,4,6:-0.321921112887;ATF6:-0.332927560801;FOXQ1:-0.337968923634;NFY{A,B,C}:-0.339617237282;ALX4:-0.354084338325;TFCP2:-0.377651991204;CEBPA,B_DDIT3:-0.378613488107;GCM1,2:-0.379827507859;MYFfamily:-0.384439467853;NANOG:-0.390018259381;ZNF384:-0.399497999019;BACH2:-0.415007941132;TFAP4:-0.417709818723;FOXM1:-0.432151535394;NKX2-3_NKX2-5:-0.443112400054;ATF4:-0.464218248734;POU5F1:-0.47764950496;HLF:-0.4820915816;ZBTB6:-0.483020522866;MTF1:-0.483923287708;FOS_FOS{B,L1}_JUN{B,D}:-0.492094837106;RFX1:-0.505896500504;NHLH1,2:-0.542743555576;PAX5:-0.545473998734;MEF2{A,B,C,D}:-0.569455101632;NFE2L1:-0.569653973324;ZNF238:-0.584884619864;LHX3,4:-0.62936595381;SMAD1..7,9:-0.630181216327;NFE2:-0.633188348306;TBX4,5:-0.643537069756;RREB1:-0.647546655131;REST:-0.658673402146;ARID5B:-0.673204535371;CDC5L:-0.687128757562;ZFP161:-0.70413725896;ESR1:-0.72518588147;HOX{A4,D4}:-0.728566433587;HOXA9_MEIS1:-0.730675794653;GLI1..3:-0.732260381755;PITX1..3:-0.737570577284;SRF:-0.750243424738;EGR1..3:-0.760940136274;EVI1:-0.765596918341;AIRE:-0.776316611731;HIF1A:-0.780243586119;ONECUT1,2:-0.859972678759;TP53:-0.862409744804;MAZ:-0.866113040591;PAX8:-0.879317218381;FOXL1:-0.884529129985;MED-1{core}:-0.88809710699;MZF1:-0.892608728436;NR3C1:-0.90430541367;ZNF423:-0.931609894543;PRDM1:-0.948837406727;PPARG:-0.950820289519;DBP:-0.960358297842;HOX{A5,B5}:-1.00937674764;EN1,2:-1.03203212919;NR6A1:-1.04279594579;MTE{core}:-1.06064684366;TFDP1:-1.06299143133;GZF1:-1.07115227695;SOX{8,9,10}:-1.0742601185;GATA4:-1.10246114344;bHLH_family:-1.10592469287;SOX17:-1.14192548443;GTF2I:-1.15054776972;TFAP2B:-1.17241489937;HSF1,2:-1.18270858012;GFI1B:-1.19338304677;KLF4:-1.22063279881;TEF:-1.23757180381;TLX1..3_NFIC{dimer}:-1.24430224894;XCPE1{core}:-1.26043930057;PATZ1:-1.27342759489;TOPORS:-1.27603592751;MYBL2:-1.28356053234;HIC1:-1.29730963345;UFEwm:-1.30274268269;TBP:-1.37317365902;ESRRA:-1.37421541154;ZIC1..3:-1.37900655969;EBF1:-1.39903369455;XBP1:-1.442384505;POU6F1:-1.50947006899;NKX3-2:-1.52588062581;TEAD1:-1.61595472642;RXR{A,B,G}:-1.7462693793;TFAP2{A,C}:-1.83362242185;SP1:-1.86084051086;GTF2A1,2:-1.89683125486;POU3F1..4:-1.91980132911;PAX1,9:-2.23711739271;IKZF1:-2.31578723594 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12211-129D6;search_select_hide=table117:FF:12211-129D6 | |||
}} | }} |
Latest revision as of 18:34, 4 June 2020
Name: | CD8+ T Cells (pluriselect), donor090612, donation3 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs12187,RDhi10019 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12187
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12187
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.239 |
10 | 10 | 0.0174 |
100 | 100 | 0.9 |
101 | 101 | 0.251 |
102 | 102 | 0.514 |
103 | 103 | 0.157 |
104 | 104 | 0.435 |
105 | 105 | 0.18 |
106 | 106 | 0.643 |
107 | 107 | 0.231 |
108 | 108 | 0.676 |
109 | 109 | 0.0478 |
11 | 11 | 0.0574 |
110 | 110 | 0.519 |
111 | 111 | 0.286 |
112 | 112 | 0.373 |
113 | 113 | 0.275 |
114 | 114 | 0.187 |
115 | 115 | 0.127 |
116 | 116 | 0.745 |
117 | 117 | 0.00463 |
118 | 118 | 0.298 |
119 | 119 | 0.807 |
12 | 12 | 0.688 |
120 | 120 | 0.499 |
121 | 121 | 0.781 |
122 | 122 | 0.253 |
123 | 123 | 0.111 |
124 | 124 | 0.0597 |
125 | 125 | 0.853 |
126 | 126 | 0.258 |
127 | 127 | 0.406 |
128 | 128 | 0.782 |
129 | 129 | 0.243 |
13 | 13 | 0.601 |
130 | 130 | 0.593 |
131 | 131 | 0.725 |
132 | 132 | 0.747 |
133 | 133 | 0.983 |
134 | 134 | 0.881 |
135 | 135 | 0.253 |
136 | 136 | 0.775 |
137 | 137 | 0.0599 |
138 | 138 | 0.343 |
139 | 139 | 0.0069 |
14 | 14 | 0.256 |
140 | 140 | 0.0363 |
141 | 141 | 0.988 |
142 | 142 | 0.932 |
143 | 143 | 2.42916e-5 |
144 | 144 | 0.702 |
145 | 145 | 0.426 |
146 | 146 | 0.145 |
147 | 147 | 0.0414 |
148 | 148 | 0.228 |
149 | 149 | 0.644 |
15 | 15 | 0.0508 |
150 | 150 | 0.754 |
151 | 151 | 0.348 |
152 | 152 | 0.42 |
153 | 153 | 0.73 |
154 | 154 | 0.973 |
155 | 155 | 0.0411 |
156 | 156 | 0.446 |
157 | 157 | 0.645 |
158 | 158 | 0.142 |
159 | 159 | 0.125 |
16 | 16 | 0.702 |
160 | 160 | 0.778 |
161 | 161 | 0.376 |
162 | 162 | 0.265 |
163 | 163 | 0.834 |
164 | 164 | 0.398 |
165 | 165 | 0.301 |
166 | 166 | 0.621 |
167 | 167 | 0.284 |
168 | 168 | 0.0885 |
169 | 169 | 0.782 |
17 | 17 | 0.626 |
18 | 18 | 0.439 |
19 | 19 | 0.57 |
2 | 2 | 0.594 |
20 | 20 | 0.855 |
21 | 21 | 0.44 |
22 | 22 | 0.856 |
23 | 23 | 0.851 |
24 | 24 | 0.55 |
25 | 25 | 0.0748 |
26 | 26 | 0.425 |
27 | 27 | 0.0231 |
28 | 28 | 0.323 |
29 | 29 | 0.0391 |
3 | 3 | 0.054 |
30 | 30 | 0.643 |
31 | 31 | 0.529 |
32 | 32 | 0.312 |
33 | 33 | 0.507 |
34 | 34 | 0.682 |
35 | 35 | 0.0526 |
36 | 36 | 0.0213 |
37 | 37 | 0.164 |
38 | 38 | 0.542 |
39 | 39 | 0.627 |
4 | 4 | 0.638 |
40 | 40 | 0.488 |
41 | 41 | 0.116 |
42 | 42 | 0.0591 |
43 | 43 | 0.202 |
44 | 44 | 0.582 |
45 | 45 | 0.998 |
46 | 46 | 0.0918 |
47 | 47 | 0.0631 |
48 | 48 | 0.132 |
49 | 49 | 0.113 |
5 | 5 | 0.152 |
50 | 50 | 0.58 |
51 | 51 | 0.525 |
52 | 52 | 0.439 |
53 | 53 | 0.222 |
54 | 54 | 0.422 |
55 | 55 | 0.319 |
56 | 56 | 0.54 |
57 | 57 | 0.623 |
58 | 58 | 0.0467 |
59 | 59 | 0.339 |
6 | 6 | 0.891 |
60 | 60 | 0.282 |
61 | 61 | 0.0857 |
62 | 62 | 0.022 |
63 | 63 | 0.698 |
64 | 64 | 0.176 |
65 | 65 | 0.585 |
66 | 66 | 0.709 |
67 | 67 | 0.838 |
68 | 68 | 0.786 |
69 | 69 | 0.807 |
7 | 7 | 0.164 |
70 | 70 | 0.0123 |
71 | 71 | 0.0764 |
72 | 72 | 0.0305 |
73 | 73 | 0.651 |
74 | 74 | 0.392 |
75 | 75 | 0.0247 |
76 | 76 | 0.378 |
77 | 77 | 0.615 |
78 | 78 | 0.122 |
79 | 79 | 0.333 |
8 | 8 | 0.772 |
80 | 80 | 8.81702e-4 |
81 | 81 | 0.338 |
82 | 82 | 0.0955 |
83 | 83 | 0.667 |
84 | 84 | 0.556 |
85 | 85 | 0.714 |
86 | 86 | 0.151 |
87 | 87 | 0.626 |
88 | 88 | 0.823 |
89 | 89 | 0.783 |
9 | 9 | 0.403 |
90 | 90 | 0.0779 |
91 | 91 | 0.881 |
92 | 92 | 0.239 |
93 | 93 | 0.155 |
94 | 94 | 0.0696 |
95 | 95 | 0.0217 |
96 | 96 | 0.0816 |
97 | 97 | 0.44 |
98 | 98 | 0.271 |
99 | 99 | 0.102 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12187
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000030 CD8-positive T cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)